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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012071 ID=TCONS_00012071|Name=TCONS_00012071|organism=Clytia hemisphaerica|type=transcript|length=1100bp
cgggaatttttttttgctgttttttgtattatttcttaaaaatcaaataC
ACAATTACAAATATTAACAGGTTATAAACGTTACCATCTCAAGGGAAGAG
GATTTTATAGCACTAAAAGTATGAATTCAGAAATAAGAAAGCTTAGGTAA
AATCTCAACTTTAAACAAATCAAAGTCAAACGGAGTTGAGTTAGATTTGT
GATTTGTGTCACTGCACTGCGGATAATTGctgaaaaaagtattttatcCT
GTTTTTTAAAAGTCACttgctttttagaaaattaattGAGGATAAAGTTG
TTATTTACAAATAGATTAAGTtaaaaagtaaagaataagtcATTTAGTCA
AGTGtccgagaaaaaaacattgtttgatttgattttcgGACAAGTGACTT
TTCACCGTTACTTTTATAAAGCACAAATGCTTTTACTTTGGCGTTTCTAT
ATGGAAACAAATCGAAGGTCTACTGAATTAAAATCATAATTAacttacaa
aaatacaaaattatagATAACTCTTTGCAACGTCTTAATAGGTATTTATT
CAAaagtaccttttccaatatacTGGTATCAAATTTATCTTAGAATTGCA
AGAAGAATTAGTCTGAAACGAAGAAGTCACAATATCACATATAGACAAGA
AAAAAGTAGCATtttcaaaatcgatttttgatttttcagccTCCAATAAA
CTGGCTAACGCGCACGCTTGCTAGGCATGTGACTTCACGCCATGATTTCC
TCGTAAATTCCTTCAAAGTAAATAACTGGCATGATTGACCTGTAGAAATA
CAGTAATGTAGTTCTGTTTGTTGGGACTAGCTAGCATAGTATAAATTTTG
ACGACGAAGCATTCTTGAAAGTTAAGCTTTTCTAGATTATCTTTTAAAGT
GAtgtaaaattattattaaatcttgttaaattaaataataatgataataa
tgaGTCGttagctttttataagaaataataCCTTCAAACAGAAATGGTTC
TACAGCTTCaaagtcccggggggggggggCACTGGGTTTGCGGACTGACG
GTATGTGCGGGCCAAAAATTGGCGTTTAAAATTGCACCCTTACAGTGCAG Run BLAST on NCBI transcript from alignment at sc0000136:62304..63403 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012071 ID=TCONS_00012071|Name=TCONS_00012071|organism=Clytia hemisphaerica|type=transcript|length=1100bp|location=Sequence derived from alignment at sc0000136:62304..63403 (Clytia hemisphaerica)
CTGCACTGTAAGGGTGCAATTTTAAACGCCAATTTTTGGCCCGCACATAC
CGTCAGTCCGCAAACCCAGTGccccccccccccgggactttGAAGCTGTA
GAACCATTTCTGTTTGAAGGtattatttcttataaaaagctaaCGACtca
ttattatcattattatttaatttaacaagatttaataataattttacaTC
ACTTTAAAAGATAATCTAGAAAAGCTTAACTTTCAAGAATGCTTCGTCGT
CAAAATTTATACTATGCTAGCTAGTCCCAACAAACAGAACTACATTACTG
TATTTCTACAGGTCAATCATGCCAGTTATTTACTTTGAAGGAATTTACGA
GGAAATCATGGCGTGAAGTCACATGCCTAGCAAGCGTGCGCGTTAGCCAG
TTTATTGGAggctgaaaaatcaaaaatcgattttgaaaATGCTACTTTTT
TCTTGTCTATATGTGATATTGTGACTTCTTCGTTTCAGACTAATTCTTCT
TGCAATTCTAAGATAAATTTGATACCAgtatattggaaaaggtacttTTG
AATAAATACCTATTAAGACGTTGCAAAGAGTTATctataattttgtattt
ttgtaagtTAATTATGATTTTAATTCAGTAGACCTTCGATTTGTTTCCAT
ATAGAAACGCCAAAGTAAAAGCATTTGTGCTTTATAAAAGTAACGGTGAA
AAGTCACTTGTCcgaaaatcaaatcaaacaatgtttttttctcggaCACT
TGACTAAATgacttattctttactttttaACTTAATCTATTTGTAAATAA
CAACTTTATCCTCaattaattttctaaaaagcaaGTGACTTTTAAAAAAC
AGgataaaatacttttttcagCAATTATCCGCAGTGCAGTGACACAAATC
ACAAATCTAACTCAACTCCGTTTGACTTTGATTTGTTTAAAGTTGAGATT
TTACCTAAGCTTTCTTATTTCTGAATTCATACTTTTAGTGCTATAAAATC
CTCTTCCCTTGAGATGGTAACGTTTATAACCTGTTAATATTTGTAATTGT
Gtatttgatttttaagaaataatacaaaaaacagcaaaaaaaaattcccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012071-exon-sc0000136-1491911889:62304..63403 | TCONS_00012071-exon-sc0000136-1491911889:62304..63403 | Clytia hemisphaerica | exon |
| TCONS_00012071-exon-sc0000136-1510915933:62304..63403 | TCONS_00012071-exon-sc0000136-1510915933:62304..63403 | Clytia hemisphaerica | exon |
| TCONS_00012071-exon-sc0000136-1575043694:62304..63403 | TCONS_00012071-exon-sc0000136-1575043694:62304..63403 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000136 | supercontig | sc0000136:62304..63403 . |
Blast
The following BLAST results are available for this feature:
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