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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012020 ID=TCONS_00012020|Name=TCONS_00012020|organism=Clytia hemisphaerica|type=transcript|length=1412bp
attttaaatttttttctttaatcaTAATCAATAATCAATTAACTTCAATA
ATAGTAAATTAAATAAATGACAGAGTGCTTCAGATATACAAGAAAGAGCC
AaataccaatttcaaattcTTGTAACAtgtaaataaattgaaaaattatc
cTTAATTGAACTCGTTAGACACGTTTTTCCTTATGATAAcgttaaaaatt
agaaaataaggGACTTCGGATGTACTTAACTTTCTTTGCTTTTAAACCTA
AATATATTCTTAATTTGAGCCTTTGTTGAGTATACTTCTTAAGAAATTGC
GTGTCTTAGGTAGATTGCAAAGCCTCGAAAGCTTCATGTTCTTATATtgc
tttgttcttataaaaaacgtgtaattctGATTGGCAATAGTGCACTATAA
GAACACCCTTAAAAACTTGATACCGTAAAAGATCCTTGTTTTATAAAGAC
attttataatatataaaaattacGATGGCCCGGAGATGTCACTGTTTTGT
CACAAAAATTCTTagtttcatcacaaaattttttggtttcatcacaaaaa
ttcttggtttcatcacaaaatttttagttttgtcacaaaaattcttagtt
tcatcacaaaaatttttagtttcatcacaaaattttttggtttcatcaca
aaaattcttggtttcatcacaaaatttttagttttgtcacaaaaattctt
agtttcatcacaaaaatttttagtttcatcacaaaaatttttagtttcat
cacaAAAACTTTTAGTTTCATCACAATTTTTCAGTGTTTCGTCACAAATT
TACAGGACTTTTCAGTGTTTCattattaatatatttttttatgaaactaa
aaaaaactttttttcttgtggcGGTAGGATCAGGCGAAAACTGGATCAGG
CGCAAGATCCTGTTTTCATATTATTTTGCGaaaaagaaatacaaagaaag
CTGAGAAGTTCGTTTTTCATAGGAATTAGTTTTCAGGAATCAGCACATCT
CTCTGGTCagccaaaagatttttttctcgccatttaatttcgcgaatgaa
gGGGTCATTCGCAAAACTTTCTTAgacgcaaaattttctgacattGAAGT
AGGGAATGTTAGGCTATAGCAAGGAGGCTTTCTAAATTAGCTGCATGAAA
TCTTTCTCTtgagtaaattttttaattgtgaacactctataaaaaataat
tcaaacaaGAAAAGGGTGGTGGACACTACTACACCTAAGAAAACGAATAA
ATTCGTTTGCATCAGATTAAGAGaattataaatttgaaaaccgaGTCGAA
AAGCTCAAAACCATGTATTTTGACTTATCTTGGTAACTGCGTTTTGAAAA
GGaggcctgaaatatttttcaatatctcAAGAAATGAGTATCGAAGAGTA
TCGCAGTGGGAA Run BLAST on NCBI transcript from alignment at sc0000134:534343..535754 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012020 ID=TCONS_00012020|Name=TCONS_00012020|organism=Clytia hemisphaerica|type=transcript|length=1412bp|location=Sequence derived from alignment at sc0000134:534343..535754 (Clytia hemisphaerica)
TTCCCACTGCGATACTCTTCGATACTCATTTCTTgagatattgaaaaata
tttcaggcctCCTTTTCAAAACGCAGTTACCAAGATAAGTCAAAATACAT
GGTTTTGAGCTTTTCGACtcggttttcaaatttataattCTCTTAATCTG
ATGCAAACGAATTTATTCGTTTTCTTAGGTGTAGTAGTGTCCACCACCCT
TTTCttgtttgaattattttttatagagtgttcacaattaaaaaatttac
tcaAGAGAAAGATTTCATGCAGCTAATTTAGAAAGCCTCCTTGCTATAGC
CTAACATTCCCTACTTCaatgtcagaaaattttgcgtcTAAGAAAGTTTT
GCGAATGACCCcttcattcgcgaaattaaatggcgagaaaaaaatctttt
ggctGACCAGAGAGATGTGCTGATTCCTGAAAACTAATTCCTATGAAAAA
CGAACTTCTCAGctttctttgtatttctttttCGCAAAATAATATGAAAA
CAGGATCTTGCGCCTGATCCAGTTTTCGCCTGATCCTACCgccacaagaa
aaaaagttttttttagtttcataaaaaaatatattaataatGAAACACTG
AAAAGTCCTGTAAATTTGTGACGAAACACTGAAAAATTGTGATGAAACTA
AAAGTTTTtgtgatgaaactaaaaatttttgtgatgaaactaaaaatttt
tgtgatgaaactaagaatttttgtgacaaaactaaaaattttgtgatgaa
accaagaatttttgtgatgaaaccaaaaaattttgtgatgaaactaaaaa
tttttgtgatgaaactaagaatttttgtgacaaaactaaaaattttgtga
tgaaaccaagaatttttgtgatgaaaccaaaaaattttgtgatgaaactA
AGAATTTTTGTGACAAAACAGTGACATCTCCGGGCCATCgtaatttttat
atattataaaatGTCTTTATAAAACAAGGATCTTTTACGGTATCAAGTTT
TTAAGGGTGTTCTTATAGTGCACTATTGCCAATCagaattacacgttttt
tataagaacaaagcaATATAAGAACATGAAGCTTTCGAGGCTTTGCAATC
TACCTAAGACACGCAATTTCTTAAGAAGTATACTCAACAAAGGCTCAAAT
TAAGAATATATTTAGGTTTAAAAGCAAAGAAAGTTAAGTACATCCGAAGT
CccttattttctaatttttaacgTTATCATAAGGAAAAACGTGTCTAACG
AGTTCAATTAAggataatttttcaatttatttacaTGTTACAAgaatttg
aaattggtattTGGCTCTTTCTTGTATATCTGAAGCACTCTGTCATTTAT
TTAATTTACTATTATTGAAGTTAATTGATTATTGATTAtgattaaagaaa
aaaatttaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012020-exon-sc0000134-1491911889:534343..535754 | TCONS_00012020-exon-sc0000134-1491911889:534343..535754 | Clytia hemisphaerica | exon |
| TCONS_00012020-exon-sc0000134-1510915933:534343..535754 | TCONS_00012020-exon-sc0000134-1510915933:534343..535754 | Clytia hemisphaerica | exon |
| TCONS_00012020-exon-sc0000134-1575043694:534343..535754 | TCONS_00012020-exon-sc0000134-1575043694:534343..535754 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134 | supercontig | sc0000134:534343..535754 . |
Blast
The following BLAST results are available for this feature:
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