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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011949 ID=TCONS_00011949|Name=TCONS_00011949|organism=Clytia hemisphaerica|type=transcript|length=516bp
TTGAACCTGAACGTAGAgattttgtttgttattttttggaaagaaactTC
TTTTTGTAAACCTTTCAGCATTGGTTCTTAGTATTGAATTAAATTTGAGT
GAGAAAAAAGCGAAGACTAAGGAATTATTATGGTTATATTAGGTATGGAT
GTTGCACAAAGTGGACATGTGTTCCAACCACCTATGGGACCACCTCCGAG
CTCTCTTAGCGAAAAGTCAGCTATTTTGCAGCAGCAGTCGGTCATTCAAA
CAAATCAACAATTACAGCAGCAACTTCAATCAATGCACGATAATGCTGAA
AATAACAGGCAGAAAAGTAGAGAGATACTGACTCGGAGGCCTTCCTACag
GAAAATTCTTGATGACCTGGCAGCAGATTCTCCAGTCAAGATGGAAAACT
ATGATGATAATGGAAGTAGTAATTCTTCAAGTCCTGGTGGACCAGAAGAA
TTGACAGATAAACAACAACAAGCTCAACAGCAACTTCAATCGATGCATGA
TAATGCTGAAAATAAC Run BLAST on NCBI transcript from alignment at sc0000134:267804..269742+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011949 ID=TCONS_00011949|Name=TCONS_00011949|organism=Clytia hemisphaerica|type=transcript|length=1939bp|location=Sequence derived from alignment at sc0000134:267804..269742+ (Clytia hemisphaerica)
TTGAACCTGAACGTAGAgattttgtttgttattttttggaaagaaactTC
TTTTTGTAAACCTTTCAGCATTGGTTCTTAGTATTGAATTAAATTTGAGT
GAGAAAAAAGCGAAGACTAAGGAATTATTATGGTTATATTAGGTAtgctt
ttttaaaatttttacttcaattAAACTTTCAAATATATTGTGAATTTATT
GTCTGATTGGTTTAATTATTTATTATATCAGGTATGGATGTTGCACAAAG
TGGACATGTGTTCCAACCACCTATGGGACCACCTCCGAGCTCTCTTAGCG
AAAAGTCAGCTATTTTGCAGCAGCAGTCGGTCATTCAAACAAATCAACAA
TTACAGCAGCAACTTCAATCAATGCACGATAATGCTGAAAATAACAGGCA
GAAAAGTAGAGAGATACTGACTCGGAGGCCTTCCTACaggtatttcaaat
ttttttataccTGTTGCTTTATGTACCGTGAGATTGTACAAAATCGCGCA
TGTTCACGTGCGCAATTTCGTAAAAATTTTGTCTTTATTACGTGAGTGAT
TCGTCGCTCTCCACTCCTCCTTATTTCTTCCTGGAAAAgcatgtaaaata
caaagttaaataaaaacaaaaatggtagagtagagctgcgagcagagctg
cacagttgcattttttaaTGATCAGCCCTAGGTCTTTTAttttagggcta
tgcatgttagcttccactgatgtaagttacccaatctcacggtagtaAAG
CTAGACAAATTTTTGGACCTGCAcatagttttttgtttgtttttattttt
gcgcGTAAAACTTATGCCAGTTATTAGGAACAGGCAGCTTGCTTGGAATT
GGGTTGAAGAATCCCTTGCAAATCATGAGCTTATTTTTCCCCTTTTTAAC
TGGTTTAAGTGATGATTTGTTGGAGATCATGAAAGTATATTTCATTTTAT
GGTGAATATCACCAggttttttaagatgaaaatctTCCTTTTTATCTAGG
AAAATTCTTGATGACCTGGCAGCAGATTCTCCAGTCAAGATGGAAAACTA
TGATGATAATGGAAGTAGTAATTCTTCAAGTCCTGGTGGACCAGAAGAAT
TGACAGATAAACAACAACAAGCTCAACAGCAACATCAGCACCAGCAACAA
CAGCAACAGGCTCAGCAACAAGCACAACAACAANTTTCTGACCGCGTTAT
CACCATGTTCCAATGAATGACGTCATGTTTGGAAAACAATTCGAATCAGA
AGAGCTTTGATTGGTTGGCATTGTTAGTTATTGGTTTTACATACTAGAAT
ATAATTATATACAAATGTTGAAGAGAAACCCTGGTAAAAGCAACCAAGAG
TTACATCCTGACGATCTGATTGGTTAATATTTGATGACGCCCGCCTACGT
CAACGATCTTGTTCgaccaaatttcttttcttctcaAGAAGTGACGTTAG
GGAATGTGACGCAGTTTTCATCATACAGCTAACACGCAAGAAGTCAAAAC
GTAACAAACCGAACAGTAAGAATTCATTATACTTGTATACTGTATTTGAA
CCTGAACGTAGAgattttgtttgttattttttggaaagaaactTCTTTTT
GTAAACCTTTCAGCATTGGTTCTTAGTATTGAATTAAATTTGAGTGAGAA
AAAAGCGAAGACTAAGAATTATTATGGTTATATTAGGTatgcttttttaa
aaattttacttcAATTAAACTTTCAAATATATTGTGAATTTATTATATGA
TTGGTTTAATTATTTATTATATCAGGTATGGATGTTGCACAAAGTGGACA
TGTGTTCCAACCACCTATGGGACCACCACCGAGCTCTCTTAGTGAAAAGT
CAGCTATTTTGCAGCAGCAGTCGGTCATTCAAACAAATCAACAATTACAG
CAGCAACTTCAATCGATGCATGATAATGCTGAAAATAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011949-exon-sc0000134-1491911889:267804..267945 | TCONS_00011949-exon-sc0000134-1491911889:267804..267945 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1510915933:267804..267945 | TCONS_00011949-exon-sc0000134-1510915933:267804..267945 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1575043694:267804..267945 | TCONS_00011949-exon-sc0000134-1575043694:267804..267945 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1491911889:268035..268242 | TCONS_00011949-exon-sc0000134-1491911889:268035..268242 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1510915933:268035..268242 | TCONS_00011949-exon-sc0000134-1510915933:268035..268242 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1575043694:268035..268242 | TCONS_00011949-exon-sc0000134-1575043694:268035..268242 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1491911889:268803..268936 | TCONS_00011949-exon-sc0000134-1491911889:268803..268936 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1510915933:268803..268936 | TCONS_00011949-exon-sc0000134-1510915933:268803..268936 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1575043694:268803..268936 | TCONS_00011949-exon-sc0000134-1575043694:268803..268936 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1491911889:269711..269742 | TCONS_00011949-exon-sc0000134-1491911889:269711..269742 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1510915933:269711..269742 | TCONS_00011949-exon-sc0000134-1510915933:269711..269742 | Clytia hemisphaerica | exon |
| TCONS_00011949-exon-sc0000134-1575043694:269711..269742 | TCONS_00011949-exon-sc0000134-1575043694:269711..269742 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134 | supercontig | sc0000134:267804..269742 + |
Blast
The following BLAST results are available for this feature:
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