TCONS_00011937 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011937
Unique NameTCONS_00011937
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4886

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011937 ID=TCONS_00011937|Name=TCONS_00011937|organism=Clytia hemisphaerica|type=transcript|length=4886bp
CACGCAGCAGGCTTAGAGAATGGTGCATGAGTAATAACTTCGATTCTCTG
ACTCAATTGCTTTGTTACAAAAAGAACAGTAACAGTAGCGAaccaaatag
aataaaaattgatatagtttttttgttgaatttcgttGAGACACtgtttt
tttatctattttggtTGACTTTCGATCACCTGGTAAAAAGTTGTCCCTGG
TATCGTCGGGACAGATCTTTTGGTGttggtaatttttttctggataaTAA
TATGTGGATAAGTTAATGTTATACCGTTGAATTTTAACAATCTAATATTT
GTTATTTTGTCATTCATTTACCGTCGAATGCTGAAATGAAATTGGCCCTG
TTTATTTGTTTTCTTGTGGCCAccataatttcaaaatGTCACGGCATCGA
TTTATTTTGTACACCAGACTCAATGACAATCACTTTGGAAATGAATATCG
ATCCAAAAGTATATAGCACCTCAATCGTCAAATTCGAAAATACTAATTGT
ACGGCAACAACAAATGGAACACATTTCTTTATTACGTCACAATTTAACGA
ATGTAACACACAAATCGGGGAAACAGTAGATGATATCGTGTTCTCAAATC
GGGTTATTGTGGACCCGAATAATTTAAAACCGGACGCGATCATTCAGCGG
TTGGAACATACTGAACATATTTATCCAGTCAATTGCTTGTTGAGGAAGGA
AAATGTGGTGGTAACAAATACAGGATATAACCTTACAGGTGACGGATGGG
AAGAATGGGGAGCGTGGTCAGAATGCACCAAAACTTGCGGAGGAGGAACA
ACAACTAGGAAGAGAGATTGCCGTGTATCGCGTAGAGATGATCTAAATTG
TCCAGGATTGGAGGTCGAAGTTGCCCATTGTAATAATGTCACTTGCCCAT
TGACATGCGACGATATagaatgtgattttttcaatcaTGAAGAATGCGAA
CCACATTATATCTTTCAAAATGCAACGTGTGAATGTATGAAAGGCTGGTA
TGAACTGGATGACGGTACATGTGACACAGAAGAGAAAATAGTTGGAGTAC
AAATCACCTTGGGATCTGATTTTCAAGATGAATTTGTGTCATTTAAATCG
AACATTACATCAGACTTTAAATCGAGAATCGAAACACAATTTACCCTACA
ACTGGGGCTTGTACCACCAGAACGTTTTATGGTTACCGAATTTTCCGCGG
GTAGTGTGATTGTGGACGGCCTGGTCATTCTTCCTCGAAACACaacagaa
aacaaaacaacaattcAAGAAAAACTGGTGACTGAGTTACAAACGAACAC
GACCGGTTTATTGGAAGAATTTAATGTCACTAAAATTAATAAAGTTAATG
aaaCCTACATTTGCGAGCTTGAATCAGACACATGCAACCGAACGCGATCA
AACTGCACTGATACACCAGACCTCTTAACTCATTATCAATGTGATTGTTT
TGAAGGCTACATCAACAAAACCGTGTATATCTGTCAAGATTATTGTGAAT
ATGGTATCGACACGTGTAACAATATATCAACTGTGTGTAGAGGAACACCA
GGGGTCGGTCGCCATTATGAATGTGATTGTGCTTTTGGTTTCGAGCGGTT
AGATAATAGTACTGATACATGTACACCAATGCCTCGACCATGTGATAATT
CAACAATGAACACGTGTAATAATTCAACATCAACGTGCATCAATACCTTT
ACGGCACCCATCTATTATAACTGTGCTTGTAACGATGGTTACCTGAAGTT
TAACAACACTGTTGATCAATGTTTGGATTATTGCGTCTCAAATAACGATA
CTTGTGATGATAACACGACAATGTGTCGCGCAACACCCGGCGACGGACGT
CATTATGAATGTGACTGCAAATATAAACACGTAAGGCTAGACAACAACAC
TGACGCCTGCACACTAGCCGATACTCCATGTGCTTGGGGAAATGATACTT
GTGATAAAGATATATCAACATGTATCGATACTTACACGCATCCAAACTAC
TTTGACTGTAACTGTTCAGCCGGATATGTCAAACAAAATCATACGACATG
TTTCGACTTTTGCGTTGATAACTCCGACACATGTAACGACACATCAACGA
CGTGTTTGGCGACACCTGGTAAAGGGCGGCATTACGAATGTCCTTGTAAA
CATGGATTTGAGAGACTCGATAACAACACGGACTCATGTACACCGATGCC
AAGACCTTGTGATACAGGGAAAGATACTTGTAACAAGACACGATCCAATT
GCACAAACACTTTGACAGCTCCGGTTTACTTCAACTGCTCGTGTGGTGAT
GGTTATCTCAAATTCAACAACTCAGTTGATGATTGTCAAGACTACTGTCA
TATTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGTGAGGCAACTC
CTGGCAAAGGACGACATTATGAATGTCCATGTAAATTTGGTTTCGAGAGA
TTAGATAACAACACAGACAGTTGCACACCAATGCCAAGACCTTGCGACAC
AGGGAAAGATACTTGCAATAAAACTTCATCCAACTGTACAAACAGCTTCG
AAGCTCCTTTCTACTACAATTGTACCTGTGAAGCTGGTTATTTGAAGTTT
AACAGCTCCTTGGATCAATGTCATGAGTATTGTCGTATTGAGGCTGATAC
CTGCAATACAACCTCTACAACTTGTATGTCTACTCCTGGCAAAGGACGAC
ACTACGAATGTCCATGTAAACATGGCTTTGAGAGACTCGACAACAACATG
GACAAATGTACGCCGATGCCAAGACCTTGTGACACAGGGAAAGATACTTG
TAACAAGACAAGATCCAATTGCACAAACACTTTGACAGCTCCGGTTTACT
TCAACTGCTCGTGTGGTGATGGTTATCTCAAATTCAACAACTCCGTTGAT
GATTGTCAAGACTACTGTCATATTGAAGCTGATTCCTGCAACAAAACTTC
AACGATGTGTGAGGCAACTCCTGGTAAAGGACGACATTATGAATGTCCAT
GTAAATTTGGTTTCGAGAGATTAGATAACAACACAGACAGTTGCACACCA
ATGCCGAGACCTTGCGACACAGGGAAAGATACTTGCAATATGACTACATC
AACCTGTAACAATACTTTCACAAACCCTGACTATTACAACTGCTCATGCA
ACCCAGGCTACTTCAAAGAAGGAGGCTCACTCGATAAGTGTTCGGATCAT
TGTCAGTTCGGAGTCGACACCTGCAACACAACTTCCACCACTTGCAAAGC
CACTCCTGGATCTGGTAGATACTTCGAATGTCCATGTAAATTTGGTTTCG
AGAGGTTAGATAACAACACAGACAGTTGCACACCAATGCCAAGACCTTGC
CACACAGGGAAAGATACTTGCAACATGACTACATCAACCTGTAACAATAC
TTTCACAAACCCTGACTATTATAACTGTTCTTGCAGTGATGGTTATCTGA
AACAAGGAGGTTCACTGGACAAATGTTTGGATCATTGTCAATTCGGAGCT
GATAGCTGTGACGAAACATCTTCGATTTGTGTGGCAACTCCTGGCAAAGG
ACGACACTACGAATGTCCGTGTAGATTTGGTTTTGAGAGACTCGATAACA
ACATGGACAAATGTACACCGATGCCCAGACCTTGTGACACAGGGAAAGAT
ACTTGTAACAAGACACGATCCAATTGCACAAACACTTTGACAGCTCCGGT
TTACTACAACTGCTCGTGTGGTGATGGTTATCTCAAATTCAACAACTCAG
TTGATGATTGTCAAGACTACTGTCATATTGAAGCTGATTCCTGCAACAAA
ACTTCAACGATGTGTGAGGCAACTCCTGGCAAAGGACGACATTATGAATG
TCCATGTAAATTTGGTTTCGAGAGGTTAGATAACAACACAGACAGTTGCA
CACCAATGCCAAGACCTTGCGACACAGGGAAAGATACTTGCAACATGACT
ACATCAACCTGTAACAATACTTTCACAAACCCTGACTATTACAACTGCTC
ATGCAACCCAGGCTACTTCAAAGAAGGAGGCTCACTCGATAAGTGTTCGG
ATCATTGTCAGTTCGGAGTCGACACCTGCAACACAACTTCCACCACTTGC
AAAGCCACTCCTGGATCTGGTAGATACTTCGAATGTCCATGTAAATTTGG
TTTCGAGAGGTTAGATAACAACACAGACAGTTGCACACCAATGCCAAGAC
CTTGCCACACAGGGAAAGATACTTGCAACATGACTACATCAACCTGTAAC
AATACTTTCACAAACCCTGACTATTATAACTGTTCTTGCAGTGATGGTTA
TCTGAAACAAGGAGGTTCACTGGACAAATGTTTGGATCATTGTCAATTCG
GAGCTGATAGCTGTGACGAAACATCTTCGATTTGTGTGGCAACTCCTGGC
AAAGGACGACACTACGAATGTCCGTGTAGATTTGGTTTTGAGAGACTCGA
TAACAACATGGACAAATGTACACCGATGCCCAGACCTTGTGACACAGGGA
AAGATACTTGTAACAAGACACGATCCAATTGCACAAACACTTTGACAGCT
CCGGTTTACTACAACTGCTCGTGTGGTGATGGTTATCTCAAATTCAACAA
CTCCGTTGATCAGTGTCAAGACTACTGTCATATTGAAGCTGATTCCTGCA
ACAAAACTTCAACGATGTGTGAGGCAACTCCTGGCAAAGGACGACATTAT
GAATGTCCATGTAAATTTGGTTTTGAGAGGTTAGATAACAACACAGACAG
TTGCACACCAATGCCAAGACCTTGCGACACAGGGAAAGATACTTGCAATA
AAACTTCATCTAACTGTACCAACAGCTTCGAAGCTCCTTTCTACTACAAT
TGTACCTGTGAAGATGGTTATTTGAAGTTTAACANN
Run BLAST on NCBI

transcript from alignment at sc0000134:167283..180347+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011937 ID=TCONS_00011937|Name=TCONS_00011937|organism=Clytia hemisphaerica|type=transcript|length=13065bp|location=Sequence derived from alignment at sc0000134:167283..180347+ (Clytia hemisphaerica)
CACGCAGCAGGCTTAGAGAATGGTGCATGAGTAATAACTTCGATTCTCTG ACTCAATTGCTTTGTTACAAAAAGAACAGTAACAGTAGCGAaccaaatag aataaaaattgatatagtttttttgttgaatttcgttGAGACACtgtttt tttatctattttggtTGACTTTCGATCACCTGGTAAAAAGTTGTCCCTGG TATCGTCGGGACAGATCTTTTGGTGttggtaatttttttctggataaTAA TATGTGGATAAGTTAATGTTATACCGTTGAATTTTAACAATCTAATATTT GTTATTTTGTCATTCATTTACCGTCGAATGCTGAAATGAAATTGGCCCTG TTTATTTGTTTTCTTGTGGCCAccataatttcaaaatgtaagtatttttt CGTTGGTTTTTCtaggagatttaaaaaaaaaatgtgaatttaCCGCAATA ATCCATAAAAGACaagatttgattttcaaacGTAAACGCAAgtaaaataa atcagaaaaatgAATCTTGAATAAGTTAAAAATGAAGGAACAGGGATGTG CGTTTTATAATAAAAGCTATAAAATTTCGGCTAAATTTCAGGGGTTCTTG TTTTTACAAAGAATTTAGGTTGTTTTAACCCCCTGTTCCAGTGACAATTT CAATTTGCAGGGAAGTACCAGGAAACTAAataaatttcatccaaaaaagG CATTTTGGCCTTATGTTCATCAAGTTGTCTTACATATCTAAAATTGTATT TCATGGCTAGACTACTGGCCTTACACGTTACTCGCCaactatttttttct taatatcAACATTAATTCACAGCTCGGAAAGAGTAAAATGTTGATAGCTT CCTCTGTTTAATaagttttttcattaaatttgtaATAAAATTCATCTAAA ATCCTAAAGTCAATGCAATTTTTATATTcttagaaattaaatttttcata gaaTCAAGACTTCGTAAATAAAGTTTCAGCCtgataaaaaattttgttaG TTTTGGCACTTTAAAGTATTATTGCATAGAAAAACCTCAAAATAAGATCA TTACAAACTTAGCTTGAAAAATCGTCTTAAATTCACCAAAAATAAGATTA AGATGACTTAAGGGTATCAGAACAAAAAACTCAACTAATCTTCTGTCATT TTGATGGATCTATCCAAAAAGGGGTAATCAAAACTTGCATTGcaaatcaa aacttttattatgTATCTCTCTGGAAGGCTTTGCATGTTGAAAAcgctat ttttttataagaacaatgttgAGTCCAGAATGACTAAATTTCAGGCAAAT TGAtggtcaaagtaataaaaataggGTACATAGCCTAAAAGTCTAAAAAG CCTCAGTATGCTCTAAATGTACGAACAggataaaaacaatttgaagCTTA TAGTGTCAGGACAGTATTAAAAGAACAAAAGTAGTTGAGTCTCCCAAAAA ATTGTACTCGTTTTAATAAAAAGAGAGTTTTTTAAGAGTGCTTGTTAAAC TTAGAGAGATTATTTCCCCAAATTTAAGCCAAATTTTTAGTCCAAATCTC AAGAATTTATATGACCCTTCGAGGGAAGActcgatttttgattttcttaa gTTTGGGGGTACAGAGACTTACAGAGACTCTTTTCAATGGTTTCCGTgcc cctttgagggactttcgagtgtgtgaaaaagggaccatTTTGGCTcatcg cacatacccggcacccattttgcctaagtatctCCCGgtgatattcttaa aaattgaaatgaaaaaggaaggaaaaaaagtgaacataggatctgaaaat tttattttcacttatttGAAATcgtagatttttctttttttccagatAAA ATATTACATACCCCAAATAAGAATactggataaaaatttctagaaTCAAT ATCGTCCAAATGGACTGAGGGTCccaattgaaactttcttcagcAAATGT ACCGTAAAAAATGAATCCTAAATACAAATTTGCTCAACAGtttctacttt ttcaaattttccacaAAAGCGCACCCGGTGAATACTGTAACTGATTTTAA TTGTTATCGTATTTTGTGAGGAAAAATACATATAGAATATTCCAGATTCT ATAACACTTAGCTTAGCCTGGAGCATAGAAGGCAAAGGTACATTACaatc attgacttccaagcccgaagggctagttagactcgagactcctggatgag aaataaagcaacttatttcccatccagaacgcccgcgcgtggtctttaca caaacgccggattgaaagtaaaatctatcgatATATTTCAACGAATACAG TCATCAAAAACAAAGGACCCGCTAGATACAATCTTTTGTCGTGATTCCGG CGCGTTCCAGGCGccttctggatgggaaataaatagcttcactttttctt gcctggaaaaggttagagattctactctactcttgtctcccgaatagacg gggggagagtccgaataagcaggggggtaggaaattttctaaattctagt AAGcaggggggatggaataagagggggggggggggtaatttgaagacata tttttttaactgatatcaatttcaacaaaaaaaaaagaaactttaacaaa tgaacacgtaaaataagaaccaatactaacaaaaaggaaaatttaaacaa gtttaaggtctatctacacggtaataaaatatcaaattattcaaatttaa ttagcaggggggtcttaataagagcggggggctggattatttttctctta tcaattagcggggggacgtctattcgggagacaagagtagcccttcaggc tttaaactcaatgatcaCAATGTGTACACTTTATTTGTAAGAACTTGTAA ATTTTTGATGATGCTCTTCTTtatttggcactttgagcctaaaaTAATTC TTATCTTGTTCTCATTTTCAGGGTAAAACTTAAATGTTTTAAGATGTAAG TAGCCTTTTTCCAGACTAACTCTGAACcattattttcttaaaattccgCT ATTCCGGGCTCAGCATTGTTTTTAGGTTGTTCTCGTTTTTAGTCACTTTG AGcctcttgttcttataaaaataatgtaGCTAGTAGAATAAAAGTATTGT GCCCTAAGCACAGAACTGATACGAATTCACTTATACAACATGcatttcaa tagaccttttcataaattacgtcacgagcatcacttgcctcgtgttccaa caattaccatggtgattatatcccttgagacattaaatgatctttttatg aatagaaagcagttttaataaaatccgttgggagttaatcaccatggcaa taatttcaaaaaagggCAAGtaatgttcgtgacgtaatttatgaaaaggt ctatttattaATAATCGACCCATTTATCGGGTAACAAGATAACccgtttt ttcaattttacggATGAAAAGAGAAAATCTCAACCTTGCGTGTTGTCTTA TCATCATAATATAAGGGATGTAaaatgtcatcaaaatttcagTCTTTTAA ATAAGTTTCCTAACAATAAATGGCTAACATCTGCTTTCATGGGGGGGGga tgaaaaatagaaattaaagaaaatctAATTCAATACTTCAAATGAGCTAG TATTCCAAGAGCAAGCTATACTAAAGTCTatttctggctgaactttgctt tttaataccttatcggggaaaatttcgtcgggaaaaacttggccgaaatt tcgtcacttttccccgacgaagttttccttGATAAGGTAAttgattttcg aatttttttaaaagccgTAAATAATCCGCTCAAAGTTatctttcaaacaa aatattacttttttaatcatatttACGAACTTTCAAAAGCAATGTATCAA AATTTGTGGACTGCCAAATTAAATGTCATGTTTGGAACAGATTTTAAATG TAAACGTTCACTATGCACGgacaatattttctttgaatgcattacacgct tcttttttatataagaatggcgcttttcatttcatcatgggttttttttt ttttttttttttttgatattcttacggtattcttaggttaagatcgaaat ttgcCCTAGATTTAACATGTAATACAAACCTGAAGAATATTGAGCGTTAC TGGGATGTTATTGACAATTCACAGGtgaaaatgccttaaaatggcattct taggttcagttgctaaattccatgatggtgatattcttaccatattctta tttttggccattttcatcatgggtattcttatttttaaaaagcgtGTACA TTTAATACCTCTCTTTACTTTAAAAAGCCATTTATCAAAATGATAAGAAG TTTAGGATTCAAAataacctctataactcgaactcgATAACTGAAACATC TCGAACAAATTAGTGTTCCCCATTCGTGTTTAAGGTTATGGGGACTCCAC TGAAAAGgtcctttttttattgaaagggaTTTCACATGGGACCCTCTTCG TAATGAGAATTCAGGGTTTTAAACTGCTTGCGTCCTAAATCGGATTCGGG CTCCTTATACAAACTTTTCTTATAAGATAGTTGTTTTCCCATACCACCTT CCACCATGGATATTCTTATGATATAAATATTCCTGAAATCTTCTAAACGG TGTTCCATACCCAGCTTAAATTTACAATGTAATACAGTCGACTTTCggta attcgaactcgaacaggGAATcctatttgttcgaattacagagagattcg aattatagaaagtatatcaAGAAAGTTTCNACGAACGGGGAATcctattt gttcgaattacagagagattcgaattatagaaagtatatcaAGAAAGTTT CTCGTTGACGGGGACTGAAAgcaggttcgaattatagaaatatttaAATA ATGAAGTTCGAATAGATGAAAGTTTTCTGTACTTTACTTCAAGTAAAATA TAGCATTTTCAGGTTGATTCTATGATGTTGATgttgatattcttagcata ttcttaatttttgaccaattttattATGAACATTCTTAtagagtatattc ttataacaaGGCGTGAAGTAGCTGAGGTTTTTTAGAGatctgtgattcag actaaaAGGGTTTCTTCTGTTACGCAAGCAAATTGCGCCGTCAAAAATGG TGCGTTTCCCCGGTCTGTTCAATAAACACTTGACTCGTATAATATTTTCT TGTTCTCGTGTAAAAGTATcatgaaaaaaatgtataatatgACTCATTCG GTATATTACACCATAATGTTATGATCTGACAAAAAAACGTAATAGCTTAA TATCTATTATCAATTGTAACAATGTTATACAAAATAAGTTGTTTTAATTA GACCCGCTGAgtcaaataaaatcaaaatgagaaTTCCATAgagtattaaa aaaaatatactgTAAAAATGGTGCAAAACTTGGTTTTTATGTAACCCACA AGCTTTGTAAAACTTGAGAGAAATAGAACTCCACTCCCAGGtgtcttaaa ggttttattcttacataagtgttcccgtttcatatcagacacatatttca tatcaggacagagTCTTCTTATTGTttatgttatgctgatataggcaaga aaatgttttcttttcctattttgatcaatcttgctccacatctgtgtcaa tccaatgtgaaaaggcctgtaaatcaaaattgatgagtaagcaaacgata aaACCCTAACCGACGAGATAGCTTATCGGATTATCCAGGCCCAGCGGAAG CAGGGAGATTGGGAAGACTTCAGCTTCCctacttttgagcaaatgagatt tttttttctcgaattcctagcaaattttatctcattttgagccttcagcc tccccacttttacggttttTCCACCGGTTCTGTTATCGCAAAAGTTAAAA ATCTAAACTGATTCTATCTACCCGTTTTCAGGTCACGGCATCGATTTATT TTGTACACCAGACTCAATGACAATCACTTTGGAAATGAATATCGATCCAA AAGTATATAGCACCTCAATCGTCAAATTCGAAAATACTAATTGTACGGCA ACAACAAATGGAACACATTTCTTTATTACGTCACAATTTAACGAATGTAA CACACAAATCGGGGAAACAGTAGATGATATCGTGTTCTCAAATCGGGTTA TTGTGGACCCGAATAATTTAAAACCGGACGCGATCATTCAGCGGTTGGAA CATACTGAACATATTTATCCAGTCAATTGCTTGTTGAGGAAGGAAAATGT GGTGGTAACAAATACAGGATATAACCTTACAGGTAAGACAGTCTTGGATA TCCCGCGATTACAGTTCAAAGACAAAAATGTAAACTGCATAACACCTGGG TGCGTGGTAAATGTTATCTGTAAAacaatactctcgggtacctagtTTCC AAGGTACTTTAAAGACATTCTTATCCCAACTACTGCATCAAATTTTTTAA GTAATAATAAATAAGCCGTAGTAATTTGTGCTTAGTTTCGGAGGTTTTTA TTCATCCaaatttttaggctgaaaagttcttaaaatatttttaatacgAC AGTTATATTCTTTGTAACCTTAAGCACTTTTTACACACCAGTCGTTATAA GCTCCGTTATTTTTGGCTTTGACGGATTAAAAACCGACGTAATACAACGA GTGTATAATATCATTTTTGAATCTGAggctaaaattgttcttaatttgtt cttattagGTGACGGATGGGAAGAATGGGGAGCGTGGTCAGAATGCACCA AAACTTGCGGAGGAGGAACAACAACTAGGAAGAGAGATTGCCGTGTATCG CGTAGAGATGATCTAAATTGTCCAGGATTGGAGGTCGAAGTTGCCCATTG TAATAATGTCACTTGCCCATTGAGTAAGTGTCCACTTTATTCAGAATTTT TTGACTATCTCTTTCCCGCTTAGATCTTCACAGGGCAAAGAAATATCTTT GAATAAGAATGATTCGAATTACGGAGATTTTTTATATGGATTTCAAGCTG AGGGGACCAACGCTTtagatcgaattaaagagaggtTTGAATTCTAGAAG TTCAAATTAAAGAAGAGGACTGTACAGCTTTGAGGCTGTTACAGGAACAA TCGAATCACTGATCCAATACCAAATACTACAGTTTTTTTAATTACTGTTC ATAATGCCTGGAACCTTACGAAATTGTTCGTAAAGGGATAAGCtaataaa aagtaaaacttaGCTCAAAGATTGCTCCCAGTCCCATGGTCCTTAGTAAA CACATTCTGAGGAACATATGACTATCTAAAATCACAAATTTCNCACAccg ttggaaaggaaatttcagaCCGAACAACTTTTCTGCTTACGAGAAACGAT gaaaatgtactcaatgtgactcaaaatgaaaaatgatgacgtcatcattt tcactgttttaattttttctctaaCCATATACACGAGACGTGTATCATAT GAAACAGGAATCTGAAATGAAATCTCTAACTTTTTTTGACTCGccaattt cgccaaaattagttctcgtcaaaataagttcccttaataTTAATGAAATT AATTCCATTTTCTCCCATACAGCATGCGACGATATagaatgtgatttttt caatcaTGAAGAATGCGAACCACATTATATCTTTCAAAATGCAACGTGTG AATGTATGAAAGGCTGGTATGAACTGGATGACGGTACATGTGACACAGAA GAGAAAATAGTTGGAGTACAAATCACCTTGGGATCTGATTTTCAAGATGA ATTTGTGTCATTTAAATCGAACATTACATCAGACTTTAAATCGAGGTAAA TAGCATATAattaaaatctgttctgttCGTGGCCCTTCGTGGAAATAATT CCTCAGCTGTCTAAAAGCTGTTGAATTTTTCGAAGCATGCCACGTAAAAT ATTTggtattgttattattattattattaaaatctTAGGATGCCATTTTG GGGACCACCGAAAACCGACCcatagagagactgatttttgctgaaaaggt gacccttagagagactttttgaaatgttttttttcgatttttgaaaaaag tcatacccttagagactttattacaattttttctctggaaatcaaaaaat ttcctaaaaatcctgaattttcagacccttagagagactaatttaaaact ttctgatttttccaacccttagagagactttgaaaggtcaACGAGGCCCA CGATTATCAAAATTGCTTCGACAATTTGAAAGAAAGTATCAAATTTAGAC TAGATGCTCTTTAGACCTTAGAATTGATATTAGAATATGTGAcctatttt ttgatttgaaagcgTAAAAAGGGtctattttgaaagtaaaaatttcGAGC CCATTTTAGGTATATAGGAGACTTTAAGGCGAGTATAACCGATTTCGGAA TTGAGTGGGAGTTAAACCTAATGTCGAAAATTTAAAACCTCATCTTACTC ATAACATTTCCTTTTGTGTTACCTTTAAAACAACAACTTTTCATTCTCAC TTTTATAGAATCGAAACACAATTTACCCTACAACTGGGGCTTGTACCACC AGAACGTTTTATGGTTACCGAATTTTCCGCGGGTAGTGTGATTGTGGACG GCCTGGTCATTCTTCCTCGAAACACaacagaaaacaaaacaacaattcAA GAAAAACTGGTGACTGAGTTACAAACGAACACGACCGGTTTATTGGAAGA ATTTAATGTCACTAAAATTAATAAAGTTAATGGTGAGTTTCTCGTTAGTT tcatgaggcccccccagcggtttgcgtgatggcgtaaccgggactttttt cttgcgtgatggcgtgattagagattttttttggcgtgatggcgtgatca agatttttggCGTTATGCGtaatagggcaaaaatttgatgcgtgatgcgt gatttgggctattaaatcgctattttttgcgtgatgacaaattttagcga ttttcgtaatgcgtgatggagaaaatttttttgcgtgatggcgtgattag gggtgccgctgggggccTCTTTAATAGATATCATATATACAACACTACAA TCAAGGCCATAATATTTGACAAATCTTATAgtcacaaacaatttggaagc ggTCTAAGTTAGGTTGGATTGAAGTATTATGACAcataaagcctaaaaat gtccttaaattgttcttaatgttctggccatcgaagccttattttcttac atagtttattcttataaaaaatgcataTTTCTTCATCAGAATCTAATCTG TAGTCCctcttattttttctttggaaactcaaaatttttgagCGAACAAC CAAACCATGTCCAAATGATGCACTGATACGTCCGTCAGAATTTAAAGATT CTggttttaaataagagtgatgcTATCGTTTGCTtcctcatcaattttaa tttataagctTTTTAAGGAGCAATATTGgctagaaagaggaaaaaaagat tattttgtttatgcagcacaatataacaatagggagacaccgtcctgata tgaaatatgtgtctgatatgaaacgggaacaattaccatgcaaaaaaaaa acaactttaatctccatttttgattttagaaaCCTACATTTGCGAGCTTG AATCAGACACATGCAACCGAACGCGATCAAACTGCACTGATACACCAGAC CTCTTAACTCATTATCAATGTGATTGTTTTGAAGGCTACATCAACAAAAC CGTGTATATCTGTCAAGATTATTGTGAATATGGTATCGACACGTGTAACA ATATATCAACTGTGTGTAGAGGAACACCAGGGGTCGGTCGCCATTATGAA TGTGATTGTGCTTTTGGTTTCGAGCGGTTAGATAATAGTACTGATACATG TACACCAATGCCTCGACCATGTGATAATTCAACAATGAACACGTGTAATA ATTCAACATCAACGTGCATCAATACCTTTACGGCACCCATCTATTATAAC TGTGCTTGTAACGATGGTTACCTGAAGTTTAACAACACTGTTGATCAATG TTTGGATTATTGCGTCTCAAATAACGATACTTGTGATGATAACACGACAA TGTGTCGCGCAACACCCGGCGACGGACGTCATTATGAATGTGACTGCAAA TATAAACACGTAAGGCTAGACAACAACACTGACGCCTGCACACTAGCCGA TACTCCATGTGCTTGGGGAAATGATACTTGTGATAAAGATATATCAACAT GTATCGATACTTACACGCATCCAAACTACTTTGACTGTAACTGTTCAGCC GGATATGTCAAACAAAATCATACGACATGTTTCGACTTTTGCGTTGATAA CTCCGACACATGTAACGACACATCAACGACGTGTTTGGCGACACCTGGTA AAGGGCGGCATTACGAATGTCCTTGTAAACATGGATTTGAGAGACTCGAT AACAACACGGACTCATGTACACCGATGCCAAGACCTTGTGATACAGGGAA AGATACTTGTAACAAGACACGATCCAATTGCACAAACACTTTGACAGCTC CGGTTTACTTCAACTGCTCGTGTGGTGATGGTTATCTCAAATTCAACAAC TCAGTTGATGATTGTCAAGACTACTGTCATATTGAAGCTGATTCCTGCAA CAAAACTTCAACGATGTGTGAGGCAACTCCTGGCAAAGGACGACATTATG AATGTCCATGTAAATTTGGTTTCGAGAGATTAGATAACAACACAGACAGT TGCACACCAATGCCAAGACCTTGCGACACAGGGAAAGATACTTGCAATAA AACTTCATCCAACTGTACAAACAGCTTCGAAGCTCCTTTCTACTACAATT GTACCTGTGAAGCTGGTTATTTGAAGTTTAACAGCTCCTTGGATCAATGT CATGAGTATTGTCGTATTGAGGCTGATACCTGCAATACAACCTCTACAAC TTGTATGTCTACTCCTGGCAAAGGACGACACTACGAATGTCCATGTAAAC ATGGCTTTGAGAGACTCGACAACAACATGGACAAATGTACGCCGATGCCA AGACCTTGTGACACAGGGAAAGATACTTGTAACAAGACAAGATCCAATTG CACAAACACTTTGACAGCTCCGGTTTACTTCAACTGCTCGTGTGGTGATG GTTATCTCAAATTCAACAACTCCGTTGATGATTGTCAAGACTACTGTCAT ATTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGTGAGGCAACTCC TGGTAAAGGACGACATTATGAATGTCCATGTAAATTTGGTTTCGAGAGAT TAGATAACAACACAGACAGTTGCACACCAATGCCGAGACCTTGCGACACA GGGAAAGATACTTGCAATATGACTACATCAACCTGTAACAATACTTTCAC AAACCCTGACTATTACAACTGCTCATGCAACCCAGGCTACTTCAAAGAAG GAGGCTCACTCGATAAGTGTTCGGATCATTGTCAGTTCGGAGTCGACACC TGCAACACAACTTCCACCACTTGCAAAGCCACTCCTGGATCTGGTAGATA CTTCGAATGTCCATGTAAATTTGGTTTCGAGAGGTTAGATAACAACACAG ACAGTTGCACACCAATGCCAAGACCTTGCCACACAGGGAAAGATACTTGC AACATGACTACATCAACCTGTAACAATACTTTCACAAACCCTGACTATTA TAACTGTTCTTGCAGTGATGGTTATCTGAAACAAGGAGGTTCACTGGACA AATGTTTGGATCATTGTCAATTCGGAGCTGATAGCTGTGACGAAACATCT TCGATTTGTGTGGCAACTCCTGGCAAAGGACGACACTACGAATGTCCGTG TAGATTTGGTTTTGAGAGACTCGATAACAACATGGACAAATGTACACCGA TGCCCAGACCTTGTGACACAGGGAAAGATACTTGTAACAAGACACGATCC AATTGCACAAACACTTTGACAGCTCCGGTTTACTACAACTGCTCGTGTGG TGATGGTTATCTCAAATTCAACAACTCAGTTGATGATTGTCAAGACTACT GTCATATTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGTGAGGCA ACTCCTGGCAAAGGACGACATTATGAATGTCCATGTAAATTTGGTTTCGA GAGGTTAGATAACAACACAGACAGTTGCACACCAATGCCAAGACCTTGCG ACACAGGGAAAGATACTTGCAACATGACTACATCAACCTGTAACAATACT TTCACAAACCCTGACTATTACAACTGCTCATGCAACCCAGGCTACTTCAA AGAAGGAGGCTCACTCGATAAGTGTTCGGATCATTGTCAGTTCGGAGTCG ACACCTGCAACACAACTTCCACCACTTGCAAAGCCACTCCTGGATCTGGT AGATACTTCGAATGTCCATGTAAATTTGGTTTCGAGAGGTTAGATAACAA CACAGACAGTTGCACACCAATGCCAAGACCTTGCCACACAGGGAAAGATA CTTGCAACATGACTACATCAACCTGTAACAATACTTTCACAAACCCTGAC TATTATAACTGTTCTTGCAGTGATGGTTATCTGAAACAAGGAGGTTCACT GGACAAATGTTTGGATCATTGTCAATTCGGAGCTGATAGCTGTGACGAAA CATCTTCGATTTGTGTGGCAACTCCTGGCAAAGGACGACACTACGAATGT CCGTGTAGATTTGGTTTTGAGAGACTCGATAACAACATGGACAAATGTAC ACCGATGCCCAGACCTTGTGACACAGGGAAAGATACTTGTAACAAGACAC GATCCAATTGCACAAACACTTTGACAGCTCCGGTTTACTACAACTGCTCG TGTGGTGATGGTTATCTCAAATTCAACAACTCCGTTGATCAGTGTCAAGA CTACTGTCATATTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGTG AGGCAACTCCTGGCAAAGGACGACATTATGAATGTCCATGTAAATTTGGT TTTGAGAGGTTAGATAACAACACAGACAGTTGCACACCAATGCCAAGACC TTGCGACACAGGGAAAGATACTTGCAATAAAACTTCATCTAACTGTACCA ACAGCTTCGAAGCTCCTTTCTACTACAATTGTACCTGTGAAGATGGTTAT TTGAAGTTTAACANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006702XLOC_006702Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011937-exon-sc0000134-1491911889:167283..167669TCONS_00011937-exon-sc0000134-1491911889:167283..167669Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1510915933:167283..167669TCONS_00011937-exon-sc0000134-1510915933:167283..167669Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1575043694:167283..167669TCONS_00011937-exon-sc0000134-1575043694:167283..167669Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1491911889:173164..173514TCONS_00011937-exon-sc0000134-1491911889:173164..173514Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1510915933:173164..173514TCONS_00011937-exon-sc0000134-1510915933:173164..173514Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1575043694:173164..173514TCONS_00011937-exon-sc0000134-1575043694:173164..173514Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1491911889:173941..174105TCONS_00011937-exon-sc0000134-1491911889:173941..174105Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1510915933:173941..174105TCONS_00011937-exon-sc0000134-1510915933:173941..174105Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1575043694:173941..174105TCONS_00011937-exon-sc0000134-1575043694:173941..174105Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1491911889:174805..175027TCONS_00011937-exon-sc0000134-1491911889:174805..175027Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1510915933:174805..175027TCONS_00011937-exon-sc0000134-1510915933:174805..175027Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1575043694:174805..175027TCONS_00011937-exon-sc0000134-1575043694:174805..175027Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1491911889:175741..175964TCONS_00011937-exon-sc0000134-1491911889:175741..175964Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1510915933:175741..175964TCONS_00011937-exon-sc0000134-1510915933:175741..175964Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1575043694:175741..175964TCONS_00011937-exon-sc0000134-1575043694:175741..175964Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1491911889:176812..180347TCONS_00011937-exon-sc0000134-1491911889:176812..180347Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1510915933:176812..180347TCONS_00011937-exon-sc0000134-1510915933:176812..180347Clytia hemisphaericaexon
TCONS_00011937-exon-sc0000134-1575043694:176812..180347TCONS_00011937-exon-sc0000134-1575043694:176812..180347Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000134supercontigsc0000134:167283..180347 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00278942 0.0017491 0.000312266 0.789822 10.3395 9.76961 6.08676 5.43535 3.21515 2.62674 2.87539 1.05631 0 0 0 0.101342 1.85691 4.43545 0 0.084847 0.000778881 0.000854836 1.32356e-05 0.136408 1.25231 1.78752 0.00296399 0.148931 0 3.18126e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011937 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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