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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011820 ID=TCONS_00011820|Name=TCONS_00011820|organism=Clytia hemisphaerica|type=transcript|length=1559bp
GTTTcgttttctaaaattatagttTCTTTTTCCAGTAACAAAATCCTGAT
TGCAAGAAAACAATATTCGAATTATATAGCCGCTTTGCTTCGTTGAAAAT
ATATCAATGAGTTATAGAGGATGTAAAAATGGGAAAAGAAATACTCTGAT
AGACTTCTTTAATCGAAAgataatttttcatcttcacgttcaattttttt
tctaaatctccttTATTAAATGATAATACTCCACTCAAAAATACTCTTTC
AACGACCGCGAAAACGCAATCTAGTTCGAATTCTATCTGGAGTTACAGCT
TTTTTGTTTTCCACTACAGATATACATCAAGACAACATTAAATGAAGCCA
TTGACTACCACATTATGAGTTCTCGAGATCAACTGCcagtaaattaaaaa
aaagatccCTGGATGTCCTcgataatttcaaaataattatattGGGGTCA
TTGACAATTTTCTAATAAATTTGCATTACGTAGGaaacaagaaatcaaaa
aatgtgTATCAGCAAACATTCAAAAACTGCAACAATACGGTTGTAGACAG
TGCTTCATAAAGGGCTACAATAACAGGGACCCCCTTAACAGCTCATGGAG
TGGAGTGATCACCTCAGGCAACGTTACTGTGTGCCTGAGTACCAAATaat
aaaacgattaaaaaatgtttgttaaaaaaccagtatcataatttttcaaa
tgaatTCTGTAATAGTTATTGTTCTAGTGATACTACAACCAAACATTAAC
TCTTTGGTGTCAACACAATACGTGCATTATGATACTCTCCAACATCCTTT
CAATGAAGAAATCAATACAACCATCGTCCTTTATCAAAAACACGACATCA
CGATATAATACATCAGGTTAAAAACTACAAAACAAATTCTTTGGCCGGAA
TCACGTTTTGCCTGCAAACTTGTCTCCGAACTAGTTGCATATGGATAAAA
TCCAGCATAATAAATACAATCGCAAAGTGCTTTTCTGCTGTGCCTAATAT
GTAAGCTAATGTAAGCCTTTTACTAGggtaaataataattttttagcgag
ataacattttctttggaaaGGTCCTAAAGAATCCTttgatttaagggctc
tgaccatagtgaatttttaatatttgccacttacaaaataataatttctg
cctgatgtagcggacaaaactttgacatgtcatacattttctgttacagt
atatggcccccaaaacggggacggcccccaaaacggggacggcccccaaa
acggaggtcgtcattaaaatgaagattctgacttgtagatttatcagaat
taaacgatttttgtttattttgaaagaatgatggttATacaccaaaatta
gataaaaattgcatataactcactctagctacttggatattgaaaataag
ttatggaaatggggtataggaaactttctacacctaatgccgttaagaaa
atgcagatatatctgtgactttagaggctgggtaaaagatatagcatctt
gaaggtcaaccagtattttggagccctagaatcagcattgataaaaccga
aaattctaa Run BLAST on NCBI transcript from alignment at sc0000132:501266..502824 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011820 ID=TCONS_00011820|Name=TCONS_00011820|organism=Clytia hemisphaerica|type=transcript|length=1559bp|location=Sequence derived from alignment at sc0000132:501266..502824 (Clytia hemisphaerica)
ttagaattttcggttttatcaatgctgattctagggctccaaaatactgg
ttgaccttcaagatgctatatcttttacccagcctctaaagtcacagata
tatctgcattttcttaacggcattaggtgtagaaagtttcctatacccca
tttccataacttattttcaatatccaagtagctagagtgagttatatgca
atttttatctaattttggtgtATaaccatcattctttcaaaataaacaaa
aatcgtttaattctgataaatctacaagtcagaatcttcattttaatgac
gacctccgttttgggggccgtccccgttttgggggccgtccccgttttgg
gggccatatactgtaacagaaaatgtatgacatgtcaaagttttgtccgc
tacatcaggcagaaattattattttgtaagtggcaaatattaaaaattca
ctatggtcagagcccttaaatcaaAGGATTCTTTAGGACCtttccaaaga
aaatgttatctcgctaaaaaattattatttaccCTAGTAAAAGGCTTACA
TTAGCTTACATATTAGGCACAGCAGAAAAGCACTTTGCGATTGTATTTAT
TATGCTGGATTTTATCCATATGCAACTAGTTCGGAGACAAGTTTGCAGGC
AAAACGTGATTCCGGCCAAAGAATTTGTTTTGTAGTTTTTAACCTGATGT
ATTATATCGTGATGTCGTGTTTTTGATAAAGGACGATGGTTGTATTGATT
TCTTCATTGAAAGGATGTTGGAGAGTATCATAATGCACGTATTGTGTTGA
CACCAAAGAGTTAATGTTTGGTTGTAGTATCACTAGAACAATAACTATTA
CAGAattcatttgaaaaattatgatactggttttttaacaaacatttttt
aatcgttttattATTTGGTACTCAGGCACACAGTAACGTTGCCTGAGGTG
ATCACTCCACTCCATGAGCTGTTAAGGGGGTCCCTGTTATTGTAGCCCTT
TATGAAGCACTGTCTACAACCGTATTGTTGCAGTTTTTGAATGTTTGCTG
ATAcacattttttgatttcttgtttCCTACGTAATGCAAATTTATTAGAA
AATTGTCAATGACCCCaatataattattttgaaattatcgAGGACATCCA
GggatcttttttttaatttactgGCAGTTGATCTCGAGAACTCATAATGT
GGTAGTCAATGGCTTCATTTAATGTTGTCTTGATGTATATCTGTAGTGGA
AAACAAAAAAGCTGTAACTCCAGATAGAATTCGAACTAGATTGCGTTTTC
GCGGTCGTTGAAAGAGTATTTTTGAGTGGAGTATTATCATTTAATAaagg
agatttagaaaaaaaattgaacgtgaagatgaaaaattatcTTTCGATTA
AAGAAGTCTATCAGAGTATTTCTTTTCCCATTTTTACATCCTCTATAACT
CATTGATATATTTTCAACGAAGCAAAGCGGCTATATAATTCGAATATTGT
TTTCTTGCAATCAGGATTTTGTTACTGGAAAAAGAaactataattttaga
aaacgAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011820-exon-sc0000132-1491911889:501266..502824 | TCONS_00011820-exon-sc0000132-1491911889:501266..502824 | Clytia hemisphaerica | exon |
| TCONS_00011820-exon-sc0000132-1510915933:501266..502824 | TCONS_00011820-exon-sc0000132-1510915933:501266..502824 | Clytia hemisphaerica | exon |
| TCONS_00011820-exon-sc0000132-1575043694:501266..502824 | TCONS_00011820-exon-sc0000132-1575043694:501266..502824 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132 | supercontig | sc0000132:501266..502824 . |
Blast
The following BLAST results are available for this feature:
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