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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011814 ID=TCONS_00011814|Name=TCONS_00011814|organism=Clytia hemisphaerica|type=transcript|length=1352bp
GTCATAGATAGAATGTTAGAATGTTACCGTAAAACCCTCAAATCGTGAAA
AAGTAAACAGTAATTCTGAAATCAGAGGGTGTTCTATTAATTATAACCGT
GATagttttcaaattaattttttacacATCTTaatgaaaaaagggaaaaa
ttatttattgatcCAATTCATTTTCGTCGTCTTCGAAATCAAATGTTTCG
TTTCCTTCCTCGTAAAATGGTTTCTTCGTTTTGCTCCCATCATCGCTTGT
ATACTCGCCTTTCACCAATGGTACATCTTTCAATGGCTTTGCCTTCCTCT
GGACCATTTTTACAACCTCGAAGGTCCATGTTATGGGGTCCCCTTGTGCG
TTACTGGTGCTTTCATCTGAAAGACTTCGTTTAACGTAAAGAAGGTAAAA
CTCATTCACGTTACTCACCAGACCCCATTTATACAACACTTGGTAATATG
GTAAAATCTTATATTTCTCCTCCCCAACCTCTTTCGTCACCGCTTTTTTG
TGCTTTTTATCCAAAGATTTGTACTCTCTGAAGTCATTATTGTTATCTCC
GTCATATGGCTTAAAGAAGGCGCCATAGTTCGGTTGAACCAGTAATTTGC
ACCTGTCAGCTGCATAAGTTTTGTCTGTATCCACGTGACCAACATATCTC
TCTCCGCCTTTTGTCCACTGAGCCATCAAGCAGCCTGAAAAATCAGCACT
CATATACCATCCAGGTGGTTGGCCTTTGCGTTCTTTGCAGATAGCGACCA
CACTGGGTGTATAATATACAAAATGTATATCCTCTCGTGGCTCAAATTCA
CCTTTTCCGTCAACTTGAATCTTCATATCATCTGGAGCGCTACATTTTTC
CTCATAAACACATTTGATTCTTTTAAGTTCTTCATTACTTTTGGACTTGA
GATCTTGAGGTTCGATTCCTTGACTCGGGTTGTTTGGCCTCATGACCCAA
GGGCGTGGTTGGTAAGCATCGTATGCTTTGGATAATTGAAACTTTGTACC
AACTTTGAAATCCTCAATAGTGGTTTGAGTTGCAGTTAATTGTAGCAAAA
CATATAAACTTGCAATGATTGCCAGAAAGTTCTTCATGATCCAATATACT
TTGTATCTACTCCAGATACTCCAATcgatgaaaatcttttgtctggtttc
atttcaatggaatgtttcttgaaaaagaaattacttTATTAACTCTATTC
ATTTTCTGTATGAAACAAACAATCAACCAAATATATTTACAATCTTCCTA
AACCTTCTTTGAGCATTTTCTACTAGCATTGGACATGGTCGATATTATGA
TAACCTCCTTTTCATTCGATAAACTAACTTTTTGTCAAACTTGGcatagg
cg Run BLAST on NCBI protein sequence of TCONS_00011814-protein >TCONS_00011814-protein ID=TCONS_00011814-protein|Name=TCONS_00011814-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MKNFLAIIASLYVLLQLTATQTTIEDFKVGTKFQLSKAYDAYQPRPWVMR
PNNPSQGIEPQDLKSKSNEELKRIKCVYEEKCSAPDDMKIQVDGKGEFEP
REDIHFVYYTPSVVAICKERKGQPPGWYMSADFSGCLMAQWTKGGERYVG
HVDTDKTYAADRCKLLVQPNYGAFFKPYDGDNNNDFREYKSLDKKHKKAV
TKEVGEEKYKILPYYQVLYKWGLVSNVNEFYLLYVKRSLSDESTSNAQGD
PITWTFEVVKMVQRKAKPLKDVPLVKGEYTSDDGSKTKKPFYEEGNETFD
FEDDENELDQ Run BLAST on NCBI transcript from alignment at sc0000132:385805..387156 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011814 ID=TCONS_00011814|Name=TCONS_00011814|organism=Clytia hemisphaerica|type=transcript|length=1352bp|location=Sequence derived from alignment at sc0000132:385805..387156 (Clytia hemisphaerica)
cgcctatgCCAAGTTTGACAAAAAGTTAGTTTATCGAATGAAAAGGAGGT
TATCATAATATCGACCATGTCCAATGCTAGTAGAAAATGCTCAAAGAAGG
TTTAGGAAGATTGTAAATATATTTGGTTGATTGTTTGTTTCATACAGAAA
ATGAATAGAGTTAATAaagtaatttctttttcaagaaacattccattgaa
atgaaaccagacaaaagattttcatcgATTGGAGTATCTGGAGTAGATAC
AAAGTATATTGGATCATGAAGAACTTTCTGGCAATCATTGCAAGTTTATA
TGTTTTGCTACAATTAACTGCAACTCAAACCACTATTGAGGATTTCAAAG
TTGGTACAAAGTTTCAATTATCCAAAGCATACGATGCTTACCAACCACGC
CCTTGGGTCATGAGGCCAAACAACCCGAGTCAAGGAATCGAACCTCAAGA
TCTCAAGTCCAAAAGTAATGAAGAACTTAAAAGAATCAAATGTGTTTATG
AGGAAAAATGTAGCGCTCCAGATGATATGAAGATTCAAGTTGACGGAAAA
GGTGAATTTGAGCCACGAGAGGATATACATTTTGTATATTATACACCCAG
TGTGGTCGCTATCTGCAAAGAACGCAAAGGCCAACCACCTGGATGGTATA
TGAGTGCTGATTTTTCAGGCTGCTTGATGGCTCAGTGGACAAAAGGCGGA
GAGAGATATGTTGGTCACGTGGATACAGACAAAACTTATGCAGCTGACAG
GTGCAAATTACTGGTTCAACCGAACTATGGCGCCTTCTTTAAGCCATATG
ACGGAGATAACAATAATGACTTCAGAGAGTACAAATCTTTGGATAAAAAG
CACAAAAAAGCGGTGACGAAAGAGGTTGGGGAGGAGAAATATAAGATTTT
ACCATATTACCAAGTGTTGTATAAATGGGGTCTGGTGAGTAACGTGAATG
AGTTTTACCTTCTTTACGTTAAACGAAGTCTTTCAGATGAAAGCACCAGT
AACGCACAAGGGGACCCCATAACATGGACCTTCGAGGTTGTAAAAATGGT
CCAGAGGAAGGCAAAGCCATTGAAAGATGTACCATTGGTGAAAGGCGAGT
ATACAAGCGATGATGGGAGCAAAACGAAGAAACCATTTTACGAGGAAGGA
AACGAAACATTTGATTTCGAAGACGACGAAAATGAATTGgatcaataaat
aatttttcccttttttcattAAGATgtgtaaaaaattaatttgaaaactA
TCACGGTTATAATTAATAGAACACCCTCTGATTTCAGAATTACTGTTTAC
TTTTTCACGATTTGAGGGTTTTACGGTAACATTCTAACATTCTATCTATG
AC Coding sequence (CDS) from alignment at sc0000132:385805..387156 >TCONS_00011814 ID=TCONS_00011814|Name=TCONS_00011814|organism=Clytia hemisphaerica|type=CDS|length=933bp|location=Sequence derived from alignment at sc0000132:385805..387156 (Clytia hemisphaerica)
ATGAAGAACTTTCTGGCAATCATTGCAAGTTTATATGTTTTGCTACAATT
AACTGCAACTCAAACCACTATTGAGGATTTCAAAGTTGGTACAAAGTTTC
AATTATCCAAAGCATACGATGCTTACCAACCACGCCCTTGGGTCATGAGG
CCAAACAACCCGAGTCAAGGAATCGAACCTCAAGATCTCAAGTCCAAAAG
TAATGAAGAACTTAAAAGAATCAAATGTGTTTATGAGGAAAAATGTAGCG
CTCCAGATGATATGAAGATTCAAGTTGACGGAAAAGGTGAATTTGAGCCA
CGAGAGGATATACATTTTGTATATTATACACCCAGTGTGGTCGCTATCTG
CAAAGAACGCAAAGGCCAACCACCTGGATGGTATATGAGTGCTGATTTTT
CAGGCTGCTTGATGGCTCAGTGGACAAAAGGCGGAGAGAGATATGTTGGT
CACGTGGATACAGACAAAACTTATGCAGCTGACAGGTGCAAATTACTGGT
TCAACCGAACTATGGCGCCTTCTTTAAGCCATATGACGGAGATAACAATA
ATGACTTCAGAGAGTACAAATCTTTGGATAAAAAGCACAAAAAAGCGGTG
ACGAAAGAGGTTGGGGAGGAGAAATATAAGATTTTACCATATTACCAAGT
GTTGTATAAATGGGGTCTGGTGAGTAACGTGAATGAGTTTTACCTTCTTT
ACGTTAAACGAAGTCTTTCAGATGAAAGCACCAGTAACGCACAAGGGGAC
CCCATAACATGGACCTTCGAGGTTGTAAAAATGGTCCAGAGGAAGGCAAA
GCCATTGAAAGATGTACCATTGGTGAAAGGCGAGTATACAAGCGATGATG
GGAGCAAAACGAAGAAACCATTTTACGAGGAAGGAAACGAAACATTTGAT
TTCGAAGACGACGAAAATGAATTGgatcaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011814-exon-sc0000132-1491911889:385805..387156 | TCONS_00011814-exon-sc0000132-1491911889:385805..387156 | Clytia hemisphaerica | exon |
| TCONS_00011814-exon-sc0000132-1510915933:385805..387156 | TCONS_00011814-exon-sc0000132-1510915933:385805..387156 | Clytia hemisphaerica | exon |
| TCONS_00011814-exon-sc0000132-1575043694:385805..387156 | TCONS_00011814-exon-sc0000132-1575043694:385805..387156 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132 | supercontig | sc0000132:385805..387156 . |
Blast
The following BLAST results are available for this feature:
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