TCONS_00011799 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011799
Unique Name	TCONS_00011799
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2193

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000132:474942..491123-

transcript sequence

>TCONS_00011799 ID=TCONS_00011799|Name=TCONS_00011799|organism=Clytia hemisphaerica|type=transcript|length=2193bp
agaaaataaaaccCAAAAGCTGtagaagctaaaattttgctaGATGATAA
GCTCCAATCAACAATTAAATTTAGTTAGAATTATTCAATACATACGTGTT
GCCTTTCAAGAATGTCCTGCAGTAATCATGAGATTATCTTCGATCCTTTT
GATTTACTGAGGAATGGTGAAAATGgaattcaacaAAAGATTTTGTTACT
TGTATTGAATCTGCCATTCACAGTAAACTCGACTTTTACTACACTATGGA
AAAAATCCTGTACAAAATTTTGTTGTGATGGTGGCTCTAACAGACTTTTT
GATGCATCCAAAGACAGTGAAAACTTTATTCCTGATTTCATTTGTGGCGA
CTTGGACAGTCTGaaagaaacaacaaagacaTATTATTTACAAAAGaatg
TCAAATTAGAATTTTTGTACGATCAGGATAATACAGACTTCACTAAGACT
GCAATGTTTGCGTTAGAGGAATGTCATCAAAAAGGAATTGAGGGAAAGAC
AAGAATAAAGGTGGAGAGAGAGTTGAAAGGTGGATGGTGTAGTTTAATTC
CTATCGCATGCAAAGCAGAGAAAGTCACCACAACCGGATTCAAATGGAAT
TTGGACGGTGACTCGATGGAGTTCGGTTCATTGGTGAGCACATCAAATGC
GTTCGGTGAAAATGTTGATCACGTGACAGTTGACACGTCACATCCACTGC
TTATCACCTTTGGAATCAAAAGTTGAAACTAACGCTGGAACTTTCTAGTC
AACGGGACaagtagactagagtctacttctggctgaactttgctttttga
taattttttatgacgctgagtccagtgaagtagactaggagcatttggcg
aggtcgccattttgaaaaaaaaaatttaaaaatccaaataacaataaaac
tacttggagttgaaggatataatcaaaaatgagaaacaaacacgattaac
agatttgtaatcccttattctcaaattaaaatattgcttcatactgtttt
taccttccaaaaacatctaaaatctggcggactgttttacagtccgccta
ggcaaaagcatattaccatatactaccgggccacttatcagcgccaaaaa
gtccataaaaaagctctaagtggaccccgggctacggGACAagttgaagt
ttttacaagctcttatttgatttggttggtcgttaacctgtaataaaata
acttttactttttctaaagttttacttcaaatgaccaattagtgaagtat
cttataaaaactccagctcatcctgGATCAACACACATATCGTCAAAGAT
GAGAAAGTCTTTATGATTGATGCACGCTCTTATTTAAGTCAAAACTTGGA
GCCTACTTTGATAGATTTGTGGTAACTTATTCGTGATTTCCGTTTTCAAG
GAATTTAGCACGAACTTCTTTGATAAACGTACGAACTTATAAATACATGA
AGTTGAACACCGGATCGATTCAATCAAAACCCCAGCCCCAACGACCTCGT
CTACCGCGAAAGTTACCTAAAATATAAGCAAAATGAAACTATGATTATGG
CGAGAGGTTGGGAGGCAGGATCAGATCTATAGCTTCGATGTCACTAGTAA
AATCGGGATTGCATTGCAGGCCTTCGGCCCTTGCACAATCCTCAATTTCA
CGTCGTGAAATCTCTCTAGATCTAATCCTGCAGAGCGACATACCTATAAT
ACATAACTTGAAGCCATCGCTTCTAGCCACCTTGTTCAAAGCTCCTTTTA
AAAGTACTTTATCATAACTAGACAGGATCCCTCCTTAATGTCCCGACAAT
ACCTAGTCTTAAACATTGAATTCGAAGACCACAATCCTCGTTTCACAATA
TCCAGTAAGGGGATGCCCACTGCCTTTGCTTTTGAGGTAGAAACATACCG
TGTTGAATGACCTGTAAAAGTGTACATGTCTATCCGCAAGTTTCAACATT
GCCATGAGCTATCTGGAAACTGTCTTTACTGCCACTTGGTCCCGAGGCTT
TATATGACTCAACAGAAGCTGAGTATCTTGTTCAGACCTCCATTCTTTAG
ACCTCGACAAATACTGGTCAATCGTTTTACTTCGTCAATTTAATGAAGTG
AAACTGGTATGAACTTTTACCTTTCACCAAGTATCTAGTATCAAATTAAC
AGATTTTTGAAGCTCTAACAGCAGAAGCCATTGCAAGAAGAGA

Run BLAST on NCBI

transcript from alignment at sc0000132:474942..491123-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011799 ID=TCONS_00011799|Name=TCONS_00011799|organism=Clytia hemisphaerica|type=transcript|length=16182bp|location=Sequence derived from alignment at sc0000132:474942..491123- (Clytia hemisphaerica)
AGAAAATAAAACCCAAAAGCTGTAGAAGCTAAAATTTTGCTAGATGATAA
GCTCCAATCAACAATTAAATTTAGTTAGAATTATTCAATACATACGTGTT
GCCTTTCAAGAATGTCCTGCAGTAATCATGAGATTATCTTCGATCCTTTT
GATTTACTGAGGAATGGTGAAAATGGTAGGTGANCAGTAATCATGATATT
ATCTTCGATCCTTTTGATTTACTGAGGAATGGTGAAAATGGTAGGTGAGA
AAGAAGAATTTTTTTATGTTTGAATTGAAAGCGAAATTTTTTAAACGTTT
ACTTGAAATATCTATAATCAGCTATAATCTTGATACTAAGCTTGACTTTC
TGAACAAAAGAATAAGATTATTTAATCACGCCAGCACTGGCTCACGGTCA
GGATGTCACGTTGAATGTTGAATGTGATAAGCAAGAAATACAACCCTGCC
AATTCCCCAAACAGTTACATCAAAATGCCTCGAAAATGTCAATATGAAAA
TTGCGTAATCAGAGAACGTATGTCTCGCTCATTATAAAAAGGCCGAGACA
AACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTAAAATGTAATTACCCTTTCCAAATAAACCTCTTC
GGTGGCGAGCGTAGTCTACTCTGACGTAATTGTAAAATTTATGTAATGGG
AGTTTGACATAGTAATGTAATGTTGTTTGGGGAATTATGAAGTTCTCTGG
GATTTCGATTGCATTTATTCAGGTTGATTTTTTATGACATCTAATGGTAC
TTTTTCTAACGAGTTTGATTACTCTGTTCTCACACTTATGTCTTTTTTTT
TCGCGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAAGACATGTAA
GAAGGCATATTGATGTAACTGCCAAACAATATGGGGCAAATGTCCAGGGC
AAATGTCCAGGGAACGAAAAAAATATTTCTATCCCCGGACAAACAAACCG
CGCGACTGGATAAGTGAACAGTGCAGCCGGATAAGTGAGTGCGTGATCGC
GGGTAGACCTGCGGTCGACTAAGTTATTGGTTATATTATAGCGTGGAAAG
CGAGCGAAATAGGAATGGCAAAATTGACGCCCATCATGCAATCATCCGAT
CGTTTAAGCACATCATGCGGGCTTCGCGTTCAGTCTGGGGGAAGTCTCAA
GAAGTAATGTTTAAACCAGTCAGGCACATCCTGGCAAATGAACGGGGTGA
GCATTTGCATGGGGTATTCGTCACCCAGTGTAAATGAGATAGGACGTCTC
AGGCTAAAAGCGTGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACCCATGG
AAAAAAAATTTCATCTATGCAGTTCTTTGAAATGAAGCAAAATATTTCCA
ACCCGGTTCAATTAAACTGGGTATTCGGCGCTATTACGTCACTTGCGTTT
TCGACCCCGTTCATTTGCCAATGGTCGCAAGTGAAAAATACCCCGTTCAT
TTGCCAGGATGTGCCTGACTGTAAACCCCAGACACGCAACAAGAAAATCC
CTGGAGTCCGGAAATGGAATCGGCAGGGTCGTTAAGAAATTCATATAGAT
GTTTTGGTGGCAATCACAAATATCTTCCTTTCGCGTCGCCCGACCGACTC
TCGAAAATTAAGTAGAATTGAGTCGGCGAGTTGGCGAATTTGTCAGACTT
TTTCTAACGATGACGTTTCCTTCGTTTAAAAATTTTATTATTGCCAATTT
TTTTGCGAGTGATTTCTAGTGCATTTGCGGCATATTGACTTTGTTTATCA
TTACATTCGCCATTTTGGGTCAGAGGTCACAGTGTTCAAAGGTCATAATT
TGAAACCACCCATAACACACGGTTATGTTTTGGCTGCTTGCTGACTGGCA
GTTTCCTTCAAGAATACACTTCAAAAATGTATGATGGAGGTCAGACGAGA
AGAAGAAATTCATTTATTTTTACGACCGACCGACCGACTCACTTTTTAGT
ATGGCGCGCCAAAAGGCTTTTTAATACTAACTTTTTTTTATAATACCAAC
TTTTTTTTATAATATCAACTTTTTTTATAATATCAACTTTTTTTTTATAA
TACGAACTTTTTTTTATAATACCAACTTTTTTTTATAATATCAACTTTTT
TTATAATATCAACTTTTTTTTTATAATACGAACTTTTTTTTTATAATACG
AACTTTTTTTTATAATACCAACTTTTTTTATTATAATACCAACTTTTTTT
ATTATAATACCAACTTTTTTTATTATAATACCAACTTTTTTTGTTAGTTT
TCATGACACCAATTTTTGTCTCGCTTACTATGCGTGTATAATCGATCAAG
TGTAGAAAGAGTCTTAGCGCGATTACACCTAGCCTGGAGACCACTTAAGG
TTTTTGATAGACTGGATGATGCCATTTCACAATCGCAAAGCGTAATGGGT
AAGACTTATTATTGNTGATGCCATTTCACAGTCCCAAAGCGTAATGGGTA
ATCAGGGCCACTGCGCGCCGATGACGACTTATTATTGGTCCAAAGTTTTG
AAAAAATTTAAAGATTTTTGCGTCTAGCCAACCGATTTGATTGGTCTGAA
GAATCAATCCACCGGCCAGAGAGAGAACAAACAACACAAATGATAAAAAT
AAGCTGAACTACCAGCAGTCTTTGGACCTTTACCCAAGCAGCCAACAGCC
AAGTCAAGGACAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAAAAAAT
TGATATTATAAAAATGAAAGTTACTGTTATAAAAAAAGTTGATATTATAA
AAAAAGTTGGTATTATAAAAAAAAGTTGCTATTTAAAAAAAAAATCTGAT
ATTATAAAAATGAAAGTTTGTATTATAATAAAAAGTTCGGTTAGTGTAAA
ACACAGGTCACAGGTCACAGGTCACGGGTCACAGGTCACAGGTCAGTGTT
GACAGGTCAGCTTCAATTACTGTAAAACACAAAGAAAATGTTTGAAAAAC
AGTTGTTGATGTCAAAAATATAATTCCAAGGGTATTTTATTGATCTAGAA
CTATTTTAAAGCTAAAAATCTACCCAGGTGCTTACCACGTGATTTCGCGT
TTTATGCCGTGTATAACACGGACCTGTAATACTTGTATATATTACATCTA
TATCACACATGTAAACAAAATATCTTTTCAATGTTATGCGCATTTTACGT
ATGTTATATGGTACAAAGAATAAAGAAATATTCGAATATCGATCTCACCT
TTGCTTTAAACAGCCCCCTATCAGGAAAATAGCTATTTCACAATCACTAT
GTCATATCTCATTTNTTTTGGTGGCAATCACAAATATCTTCCTTTCGCGT
CGCCCGACCGACTCTCGGAAATTAAGTAGAATTGAGTCAGTGAGTTGGCA
AATTTGTCAGACTTTTTCTAACGATGACGTTTCCTTCGTTTAAAAATTTT
ATATTGCTATTTTTTTTACGAGTGATTTCTAGCGCATTTGCGGCATATTG
ACTTTGTTTATCATTACATGCGCCATTTTGGGTCAGAGGTCACAGTGTTC
AAAGGTCATAATTTGAAACCACCCATAACACACGGTTATGTTTTGGCTGC
TGGCTGAGTGGCAGTTTCCTTCAAGAATACGCTTAAAAAATGTATGATGG
AGGTCGGACGAGAAGAAGAAATTCATTTATTTTTACGACCGACCGACCGA
CTCACTTTTTAGACCCAACGAGAACGCGAAATGAAGATATTTGTGATTGA
CGCCTTAGCAAACACAACAGTCTTTTGAATAACTAATTACTCCACAGCAG
TTACCTAGGGACAAGATAATTTAACATGTTTTTTATTGGCTGAGGGAAAG
TAATGAAGTAATTAGTTATTCAAAAGACTGTCGCGTTCGCAAAACATCTA
TTGCGTCAGTTGGGTTTTAAGATAAAAACATTTAATTGCTCGTTTTGCAA
ATTATTGCCAAAAACTGCAATTTTTTCAAAGATGAAATGCTGAATCAGCA
GAAAAGTAAAAAAAAAATGAAATAAATGAAAATTATAGTTTTCTCAGGCA
GAAATTATTATCGTTTTTGGTGGAAAAAAAAGTTATTTTATTATTGAACA
CATGGTATTTGACACCCTTGTAAGTAGGCCCACTGTGTCTTGATTAGTTC
TTTGTTTTTAACTGGTTTTGTCAGTTTGTTGGGAATGCAGGCTAGCAAAT
CAAGTCATATGTACCTGCAGTATGTAAACAAACTTAAAATGGTGGTTATG
TTGTTTCTTTCTGGCTGCATGTTTCGGCATTGATGCTGGATATTTTTGCA
TATAGTTTTAGAACTTTTCATGTTATTGGGCAACAAAAAATTGAAAATAT
TTTTATTGAAAATTGTATAATTTTATACAATTTTCAAACGCCTCTGATAT
CTTTGCCCTTATAAGGCCAACACATTTTGCTTATTCAGCATTTCATCATT
GAAAAAACCGATAATTGCTTTTTCTCTCTTAAATACCTGTAAATACCCAA
CTGGTAATTTTTTGTACTGTTTGTCAGTCTTTTGTAGGGGTATATTTGTT
TTATAGGAATTCAACAAAAGATTTTGTTACTTGTATTGAATCTGCCATTC
ACAGTAAACTCGACTTTTACTACACTATGGAAAAAATGTAAGCTTAGGTT
GTTTACCAAGTCTGGAAATGGTGCACATCTCCCTGTGGTATTTTATTGCA
TTGACCTGTGACAAGTGAATGAAATACAAATAAAAAGCAGAAATATATCA
CACTATATATATCTTTATATTCCTGCTTTCCTTTAGGTTGGAAGGCTAGT
TTTATGTCGATGGTTACCCTTCTAATCCAAACGTCCTTTTTTAGGGATGA
GAAAGATTCAAAAGATAGGATTAGCTGAATCACTGATTAAAAAAAAGTTT
TTCCTTCTCTGGCTTCTAAAGAATTTTCTATCATTGATGCCAATCAGTCA
AACGTCCTTCTTTTGCTATCTTTAAATAAGGGATACTGCAATTGAGGGAA
TTGCCTGACTGAAAGGTTATCAGGATTAGAAGGGGGATTTTCACAGATAA
TAGACGGGTTATAAAAGTGCAAAAAAAAGTATTCCCAGAAATATTAAGCA
AACAATTATCTCTCTTGTTGTACAGAACAGAGGAAAATATTTTTGCTAGT
TTGTCAAAAATTCTAGAAATGTGCAATGAAGGTTTTGCCAGGAATAAGAA
AGTTTTGTCATCCTTGGATAATAATTTGGCAAAGGCATCGTTTCCAGACT
TGGTTGTTTTACTTATTATTACTAAGATGTATAATAAACCTTTCATGGAA
TGCAAGGAAATTCTGAATATGATTGAAAACTCCACTGTCAAAACAATGAT
AAGAAAATATTCAATTCCTTATATTTGCTAATTATGTTTTCCTGAGTTCT
TATTGTGAAGCTGGAGCTTTTAATTATTCAACGTGACATTGTGTCATGGC
GTTCTAAAGCATTGTCTACAAAAGGTCTATTTTTCCCAGAGATTTAATTG
CTATCTTTAACTTCAGTATACCCAGCCATGATCTCAACCTTCAATATGAT
TATTAAAAAAATTCTTTATTATTTAGCCTGTACAAAATTTTGTTGTGATG
GTGGCTCTAACAGACTTTTTGATGCATCCAAAGACAGGTATCCTAGTTTC
TCTAATTGCAATTTCTTATAAATATTTGAAATTGTATTTTAACCTTAACA
ATTCTAAATTTTGTCGTAATGGAATTCTACTTTACTGTCCCTGTTCAAAG
AAGAAAGACTATCATTACTCAAGCAGAAAAAGCTTGTTTGAACTGTTTTC
TTCAAAACGACTAAGCTATGTTTTATATTCTTCCTTTTAGTGAAAACTTT
ATTCCTGATTTCATTTGTGGCGACTTGGACAGTCTGAAAGAAACAACAAA
GACATATTATTTACAAAAGGTAAGTATGAAACCGTTGAAAAAACACTTTG
TGATTGAGATCTTCAATGCCTCTTCTATTGATCATTAAGTAAGCAAGAAT
GACACTCTAAATATTTAAGAACATTTTTATAACGAGTCAAATCTTTAGTA
GCCTTGAAAGCAATTTTGAAAAAATGAACACTATTTTAACAATTTCACCA
ACAATTTTTATTTTAGAATGTCAAATTAGAATTTTTGTACGATCAGGATA
ATACAGACTTCACTAAGACTGCAATGTTTGCGTTAGAGGAATGTCATCAA
AAAGGAATTGAGGTAATCCAATCCTGTACCAAGAATCACAAAAAAGTGAA
GTAACTTAATCTAAGTATTTGTTCTTTTCATTTTCGAGGATTCTAAGGAT
TCTAATATTGAAAGTTTGGATTCAAGGTTATGTGATTATTTTAGTCAAGT
GTACAGCGCTTTTTCTTCCAAAAAGAAGATACAGAAAGGAACTTTTGCAT
CTCCAAATTAATCAAAATTCTGCTAAATTTGAAGAATCTTGTCGCATTTC
TGTTTAACCTTGATCACTGCTTATTATATGAAAATTAACCATCCTGTGTG
GGAATCGAACCCTGTTTGCCTGCACAGCAAACAATGCTGATAGCTACTAT
ACCACAACAACACTTTGATAAAGCATAGTTTTAAGACAGAGAAGACAAAT
TTTTTATGATCAAAGAAATGAAAGCCGGGAAATCTTACTAAAGTTCAAGA
AAAAGCTATCCTGAATTTCAGATTTATCTTTGCATTATTGAAAATGAAAT
GGATAATTTTAATATTTATATACAATTTGAAATTATATTAACATTTTGAA
ATTATATTAACATTTCGATAAATTTATGTACAGTTATAAAACAATTCAGA
GGATAAAATTGGCATAATANCGATAAATTTATGTACAATTATAAAACAAT
TCAGAGGATAAAATTGGCATAATAAATTTTAAGAGGAATCTACAATATAG
GCTCCGATTGGAGGCATTGAAATGACTTGACATTTATCAGATTGTTCTTT
TTGTTTGTGGTAGGAATTCATTCCTTCAGAGTCAATATTTTCTTCTTGTA
AAAGTTTCATGAAGCTAAAACCATTAGGATGCGAAGCTGATAATGCTTTA
TTGCTCTGATCTGTAGTGCGATATGATGCGACTGGTTTCGTTTGTTTTGG
TCGAATTTTAACATCGCTCATTGAATTCAAGTCTTTTGTTTTGAATACTT
CAATATTACCTAATAGTGCTTTGAGAGGAATATTTGAGATTCGAGTGAAT
TTCCCTTCAGCATTTTTCTGTAATACTGCAATGTTAGTATTGTCAATAGT
ATGATTTGCTGGCACTGATATACTACCATTGTTTGGAAAATGGAATGCTT
GGTTCTCGACTGGAGAAGGTTTAAACTCAATTTTGGTGTTTGTTGGTGCT
ACCTGGCGCTCCTCCATTCTAGTTTTCTTGAAATTTTCTTTTTCCATGGT
AGTATCGGAATGACATCTCTTCATCCCTTTTGTTTGCTTTTTAATAGCCA
CTTGTTGTGTAGATGGTGGACTTGGATTGATATTTTTGATGTTTGAAAGA
GGAGATCTTTTCTCTGGCTGAATGTAAGGTTGGTGTTGTAATGTCACAGG
TGTTCGGTTATTTGCTGGTAGCTGATGGATTTGATGCTGCTGGTGATATT
GTGGTGTACTATTTGATGGATAGACTGGACTTGGTAATGGTGAATTCATA
TCATTTGATGGTTGCTTGAAGTTGCAATGCTGAGGTTCCGGATGGTGTGG
TCTATAGTTGGACTGTTGGGGAACTGGATGATATTCTTGTTTGTTGCTAG
GATATGATTGGTTGTTGTAACTGTGGTGCTGCGGTGGAGCATGTTGTTTG
ATATTACATCTTTGTACAGAGGGGTCTTGTCTGAAACTGCTTTGATCGTT
TGTTTGACGGTTTTGGCGATCTTGTAGATAGCTGATTTGGTTGTCAAATG
GTTCTTGTTTAATACTACTTTGTTGGTATGCTGAATGTTGTTGCTGGTAA
ATTTGTTGCTGTTTACTGTTTCCATTCTGTTGTTGAACCTGGTTATTCCT
TTGCTTTTCGTCTTGAATCATCTTCTTAGCAGGTGCTGTGTGACGTGTTG
TAGACATTTTGGAGATGAGCATTAATAGTGTTGATTTAGTGTTGTAGTCT
ATATCGTCTGCGGTCATAAGGCTACCAGACATTTCAACAAGACATGAATT
GTAACCAGAGCAGAAACTGTCTTCTTGTTCTGAACAGAATAAAAAAATAA
GAAATATTTTGAAATAAACGGAGAAACTTTTTCTAATACTTAAAGTCTTG
CTTTCTCAAGCATTCATCAATTTTAGGCATCCAATAAGGCTGATTTTAAG
AGATGTGTTGAGTGGGTGTTTTTTGTTCAATATTTTGTCGTTTTTATCGT
ATAGTTAACGTTTTAAGGTCACAAGTTAACTTCGTCAATCGAATTACACG
TCGATTATAATGGAATAGCATTTGAAGAATTGATAAACTGTTTAACATTA
TGAAATGAATGAGAACAGATGAAGACTTACGTGATTGCTTTCGTTCTTTG
AGGAATTTGACAGTAGACTCCAATACCTCCACTTTGTCTGCTTTCTTCAA
ATCGCATCCCTGAAGAAAATAATTAAATCTAATATCAACAGATGTAAAAT
TTGAAGTGATATAGGCTTTTGAATATATAACATTTTATGGCAATACCCCT
CGCAAATCATATAATAAGATTAGATGGATTAATACATTTTATAACCATAA
ATGGTTAAGATAAGACTAGCGAATTTGGCAAATTACCTTTAGAAAACTCA
TCAAAATAGCCAAGATTTATTGGCACAAAAGTTGCCAAAACAAGAACTAT
AACGCGTTACCCATAATGCGTATAAGTACAGGTATTACAACTGTATACAA
TAAGACATACCGTATTTTCTTGTAGGATGTCTTTGATTTGATCAAGCGCG
TTGGCCATTCGTAATCTTCTCTTTCGCTCTACTTCTTGTTTACGCATCTG
GAGATAAGAAAGAAGTTCAGTTAACAGTTAGCATGACTACAAAGTTAAAC
TTTAGCTCGCTATTCTACTTCTACCTTAGAATGCAAGAAAATAATCTGAC
AGTAATGATTTTGAAATTCAAATTAAAAGGAAAATTCATCGTAAGTTTTG
GTTCGTTAGATTTGTTAGACGCTAGAGCATTACATTATCAGCTTGCATTA
CTGGACTATACCTCTAAAACCACTACCGTAATATGAAAAGATTAAATTTC
GAGCACAGTATATTGTCAAGGTTGAAAGTACTTTGTACAAAACTTAACAG
GAGGGCCTCTTGTTCGATTTTATCTATATCAATGCCGAATGTCAGCCTTG
GTTTAAAAAATATTTGATAAAGAGATCAACGGATTGAAACCCATCGAAAC
CTAATCCTAATTTGAGGGTTCTTTTAAAAGCGTCGAACAATAAAAAAGCA
CCTTGTACAAAGACAGAACTCAAAATTCACCTTATTTTTAACAGGTCCAT
TTCCATAATCATTCGATTCTTCACCGCTTTCCATTATAAATCAAAACAAA
ATTCCCAAAATAAATGAAATTATTTCCCAAAATTATAATATCTGTTTGTA
ACCAAAACTCTGCACTCTCTTCCAAACCTTTTTCTCAATAAAATGTACGC
ATGGAAAAGCAAAAGGTTTCATATGAGAAATTGTTTCACTCATAAAAAGT
AATCTCTCTCTTCTCTCTCAAAATCAACACCTGACGCTTATTAAGGGGTG
GTTTCCATATGACATCAGATTACACAGTACTAATAACCTTACTGATTATA
GAAACCACCCTTGATTGATTAGTTAATTGTTGATACACTAAAGGAATGGT
GTCGGCGTTTATAACAAGTAATTATTAACACTTTATGAAAGGATTTCAAA
GGATCTCGCTTAACCTATTTTAAATAGACCTATTGACACCTTTTAACAAC
TTTACAATAGAATTGTAATAGCACTTACACCTGACGGTGAGTAAGACGCG
CGTCTCTTTTCTGAGACGTCTTTTTAATGTCCCAATGAACGTTCAAATAA
GACTCTCTAGTTTAACGAACGCGCGCCCTCGTGGATTAGATTTTCTTTTG
ATCGATTTTGAATTTCCTTTCCCGCAAAATGTAAAGGTTATTTTGGATTG
GCGCCTTGAACTGCCGAAATTTCTATTGTTTTTCTTTTTCTTCACCCCCC
TGTTATAATCTGGTAATCGTAAATAAAGTTCGCGGATATTTGTTTCGTTA
TTAAAAACATGAAAATGAAATATGCGCATGCGTGGATAGATTTATTGATA
ACAAAATATTGAAATTGAAATTGGATTAATCTTTTAACTTGTTTTTACTT
TTTAACAACTGATTTGATAAGCTAAATTATTCAAATTGATTTAAATTTAC
ATACGGCACGCGCCCAAAATTAAATTATGATGATTTTTACGTCAAGATTT
GACCGTGACGGGTTTTTCCTTCCTCCCCTTAACTTCATTCGTTGTCAAAC
ATGTTTGTCTATTTAGGTAAGTTCTTTAAATTAAACCTCTCTCACTATAT
AAACCTTTTCTTTAACGAACAAGCAGTACTCCTCTACCGACTCCGACTAT
AGATTTATAAAACCCGAAGGGCTAGATGTCGTGCTTTGGACCAATCAGAA
ACTTCGGGGATTTTCAAAAACAATAACGGCAATATTTTTGGTGATATTGG
AAAAGCTTAAAGCACGACATCTAGCCCTTCTGGCTTTATAAATCTATGAC
TCAGATTCGATTTACACCGACTGTGAAAATTTGCCAACGGGTGATAAAAA
CCCGAGGGGTATATCTCAAAAAAAAATTTTGTACCCTTTTTCATTAATCA
ATTTGAAATCAAAATCATAAAAATCAGAGATAATTAAACAGTAAATCAGA
TCTTGTACATTAAATTGTGATTTACAAGTATAGTACCCATCGTAAAGCCC
AAAAAATTAATATTCTCAAATACATGAAACTCTCTCCCCAGATACTAAAG
TCAGGATTTTTAAACTAAATGTTTCATAAAAATTAATACCTTAATTTCAT
TAATTTTCGCGAAAATTAAAGGGTGGATGAATTAGTAATCGTTCTGATCG
TGTAGAAATCTCATCTTAGGGCTCTTTTAATAAATGGGACCTCGTTTCGT
GGTAAATATGCCTCTGGGATGTAAAATCTAGCTTGAATACACACTGAAAG
TGAGTAAAACTCACTTTAAATCGTCAAAACACTCAGAAAATATCCAAGAA
ATTGCAAGATGCGCGAAAATTAAAGGATGCGCGATATTCTATTTTAAGAG
CTGCGTGAAAATTAAAGGCGCGAAAATTAATGGGATTAAGGTAGGTGAGT
TTTTAGATTCCAATGGGTTTAGATTCCTCTCGGGTACCTAATAGCCGTCC
CCCCTCCCGCGAATTAATTTTTCGAAAATTTTCCACCCAGGACATTCTTA
TTCCAACCCCCCAAGCTTATTAATTTTTGGGAAAATGTTTTTGAAAGTTC
CCTCTTTTGTCCTAATTCGCTGTATTAGCCTCCTTTTCAAAAATTTTCCA
CCCAGGACGTTTTTATTCCAAACCCCCCCCCCGCTTATTTAGTTTTGAGA
TTTTTTTCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GAGAGTAGATAGGTTGGTCTAAAAAGCAGGGTACATAGCCAATTGCGGTA
GCCAATTGGGTTAGGTTGTAGGGTACCCCTTTTTGCCCGAATATTTGAAA
GCCTATTGTTTTAATTTGTGGAAATACGTTATGAAAATATGTAACCTTTT
AACAGTCATTTAGAGAAATCAGGTTTTCATTTGCTTTGTAACTTTAGTCA
TTTTTGTAAAAAGTACTAAAAAAGTCTACTTTTGTTCACTGAGTGCTTGT
CTTCCCTCCTCTCATAGGTACTTTGAAAAATTACAGACCAGACCATTTTT
ATGATTAAAGGTACAGAGTATTTTTGAATCCCCAACATTCTAACAGAGGC
TCAAAGTGAAAATCAGAACAATGGGTATTTTCATAGCATCAAAAGGATGA
TGATTTACCTTACACCTATATAAGGAAATTACATTTGATAATTATACGTA
ATCGGAAGGTCTTTAGTTCAAATAATGAAGAAAACAAGCTCTGACTATGT
GCTAAGGTAAACTTTTCTTTTTTTGTTGATTCGTGCAGTTTGATTGTTTG
GTAGCTTACCCAGCATTTGGAGGACGGTTGGACCAGACAATGGCTAACAT
CAACACGATGTTTCAATTGAAAGAAAAGACCAAAAAACCGTGTTATTTGA
TCACTGATGATGATATCGCTTTTCTCGTCGACAAGGTTTAAAACGATTTC
GAAATCGTGTTACTGTACATACAGGGTGTCCGGAAAAAAGTATCGAGTCG
TACCACTTCTATAGAAAGAAAGTTCTTCCTTGTGTTTCACTAAATTTGCA
AAGTTTCTCTCTGTGTCATTTTAATTCTCATAAGACATCTTTTATGAATA
ACTTTTACAAAAAACAATTCTTAATAACTTTAGGGTAACTTTTTTTTAAT
CATAATGACTATTGTAAAAACAATTATTGTATTGGTATATATTGTCTTAC
ATTTTGTTAAACACACGCAACAACCTTCTACTCAGAATCATGTTCGAACT
CGATTCTTTTTTTCCGGACACCCTGTAGAATAGAGTCCCTGGCAAATTAG
AAATTAGACGCTTGGTTGGCAAAGGTGATGGAGAAATTTTTTGAGTTGTA
AAATAACTCGTGGAGAAATTCCTGATAATTTTTCTTGCCATAAAACCAAT
TGCATGGAGACATGTTCCATGAATGGATATGATTTAAGGAGTTTGAGGAG
AATGCTGCAAAATGTTTCAATAATTTATGTTTGATTTTTGTTCGCATGAG
GGTCATTTTGCATGTAAGATAAAATTATCTATTGTTTCTTATTTGTGATA
AATACAGGGTGTCCCTAATTAAAGTATCGAGTCGAAACACAACTATGAGT
AGAAAGTTTTATGTGCGTCATTACAATTAATTTATACGTTGTAACTACCT
TTTGTAATAAGCCTGTGTGATGGAGAACGTTCTTATATTTTAGCGATAAC
ACACACAAACTTTTCTACTCAATCGCATGTTCAAAATCGATACTTTAATT
AGGGACACCCTGTACAGGGTGGGCAAAAATATATTTATCTGACGAATTTT
ATAAACAATGAACGAAATGTCTCAAACAATGAAAAACTAATGACAGATTA
ATTTTTTTGGAATGTATTATGTATCATATTCTATGATGTATCTGACACGA
GAAAAGTGTCTAATTGGAACGATTATGAGGATTTTCTAGCGCAACTTGAA
AAAGAGAAATAGAATTTCTATGGCACTAATTGCTCTGTCATCAGCATTCT
TTTTGTTTGACCATATTTTTTTGCCCACTCTATACTCTATACTATAATCT
CGCGATATTTCATTTTATTCTCCAGGGAAAGACAAGAATAAAGGTGGAGA
GAGAGTTGAAAGGTGGATGGTGTAGTTTAATTCCTATCGCATGCAAAGCA
GAGAAAGTCACCACAACCGGATTCAAATGGAATTTGGGTAAGATTCCTTT
CCATACCTTTTTTCGAAATAGTGTCTGCATTATCTAATGTTACATAGACT
TAACCAGTATTTTGCTGGTCAACATTAATGGCATCAAACATTCATTTGAT
ATTCTGAGTGATGGAATATCTATGTTCATCAAACGTCTAAGCTCAATGAA
ATAAATCTTAAAATACTAGTGTCTAGCCCCACAACCGTAGGTTCCTCTAA
TCACAGTGGCTTCCCAGATTCCTACTATTTCATTGATATTTAGACGGTGA
CTCGATGGAGTTCGGTTCATTGGTGAGCACATCAAATGCGTTCGGTGAAA
ATGTTGATCACGTGACAGTTGACACGTCACATCCACTGCTTATCACCTTT
GGAATCAAAAGTTGAAACTAACGCTGGAACTTTCTAGTCAACGGGACAAG
TAGACTAGAGTCTACTTCTGGCTGAACTTTGCTTTTTGATAATTTTTTAT
GACGCTGAGTCCAGTGAAGTAGACTAGGAGCATTTGGCGAGGTCGCCATT
TTGAAAAAAAAAATTTAAAAATCCAAATAACAATAAAACTACTTGGAGTT
GAAGGATATAATCAAAAATGAGAAACAAACACGATTAACAGATTTGTAAT
CCCTTATTCTCAAATTAAAATATTGCTTCATACTGTTTTTACCTTCCAAA
AACATCTAAAATCTGGCGGACTGTTTTACAGTCCGCCTAGGCAAAAGCAT
ATTACCATATACTACCGGGCCACTTATCAGCGCCAAAAAGTCCATAAAAA
AGCTCTAAGTGGACCCCGGGCTACGGGACAAGTTGAAGTTTTTACAAGCT
CTTATTTGATTTGGTTGGTCGTTAACCTGTAATAAAATAACTTTTACTTT
TTCTAAAGTTTTACTTCAAATGACCAATTAGTGAAGTATCTTATAAAAAC
TCCAGCTCATCCTGGATCAACACACATATCGTCAAAGATGAGAAAGTCTT
TATGATTGATGCACGCTCTTATTTAAGTCAAAACTTGGAGCCTACTTTGA
TAGATTTGTGGTAACTTATTCGTGATTTCCGTTTTCAAGGAATTTAGCAC
GAACTTCTTTGATAAACGTACGAACTTATAAATACATGAAGTTGAACACC
GGATCGATTCAATCAAAACCCCAGCCCCAACGACCTCGTCTACCGCGAAA
GTTACCTAAAATATAAGCAAAATGAAACTATGATTATGGCGAGAGGTTGG
GAGGCAGGATCAGATCTATAGCTTCGATGTCACTAGTAAAATCGGGATTG
CATTGCAGGCCTTCGGCCCTTGCACAATCCTCAATTTCACGTCGTGAAAT
CTCTCTAGATCTAATCCTGCAGAGCGACATACCTATAATACATAACTTGA
AGCCATCGCTTCTAGCCACCTTGTTCAAAGCTCCTTTTAAAAGTACTTTA
TCATAACTAGACAGGATCCCTCCTTAATGTCCCGACAATACCTAGTCTTA
AACATTGAATTCGAAGACCACAATCCTCGTTTCACAATATCCAGTAAGGG
GATGCCCACTGCCTTTGCTTTTGAGGTAGAAACATACCGTGTTGAATGAC
CTGTAAAAGTGTACATGTCTATCCGCAAGTTTCAACATTGCCATGAGCTA
TCTGGAAACTGTCTTTACTGCCACTTGGTCCCGAGGCTTTATATGACTCA
ACAGAAGCTGAGTATCTTGTTCAGACCTCCATTCTTTAGACCTCGACAAA
TACTGGTCAATCGTTTTACTTCGTCAATTTAATGAAGTGAAACTGGTATG
AACTTTTACCTTTCACCAAGTATCTAGTATCAAATTAACAGATTTTTGAA
GCTCTAACAGCAGAAGCCATTGCAAGAAGAGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006618	XLOC_006618	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000132	supercontig	sc0000132:474942..491123 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.253512	0.283646	0.393851	0	0	0	0.348105	0.280115	0	0	0	0.229641	0	0	0	0.049669	0.0980839	0.354254	1.51242e-06	0	0.564015	0	0	0.268327	0.286816	0.25494	1.45232	0.769447	0	0

Blast

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BLAST of TCONS_00011799 vs. Swiss-Prot (Human)
Match: TPK1 (Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.097e-34
Identity = 86/249 (34.54%), Postives = 123/249 (49.40%), Query Frame = 1

Query:  130 EIIFDPFDLLRNGENGIQQKILLLVLNLPFTVNSTFTTLWKKSCTKFCCDGGSNRLFDASK-DSENFIPDFICGDLDSLKETTKTYYLQKNVKLEFLYDQDNTDFTKTAMFALEECHQKGIE-------------------------------------------------GKTRIKVERELKGGWCSLIPIACKAEKVTTTGFKWNLDGDSMEFGSLVSTSNAF-GENVDHVTVDTSHPLLITFGIKS 723
            E  F P + L +  N    K  L++LN P  +++ F  LW K+  + C DGG+NRL+D ++ + E+F+P+FI GD DS++   + YY  K  +L    DQD+TDFTK      ++  +K ++                                                 GK R+ V+  ++G WC LIP+     +VTTTG KWNL  D + FG+LVSTSN + G  V  VTV+T HPLL T  IKS
Sbjct:    2 EHAFTPLEPLLSTGN---LKYCLVILNQP--LDNYFRHLWNKALLRACADGGANRLYDITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEGDWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGV--VTVETDHPLLWTMAIKS 243

The following BLAST results are available for this feature:

BLAST of TCONS_00011799 vs. Swiss-Prot (Human)

BLAST of TCONS_00011799 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TPK1	6.097e-34	34.54	Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK...	[more]

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TCONS_00011799 (transcript) - C. hemisphaerica