TCONS_00011797 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011797
Unique Name	TCONS_00011797
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2212

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000132:474942..490930-

transcript sequence

>TCONS_00011797 ID=TCONS_00011797|Name=TCONS_00011797|organism=Clytia hemisphaerica|type=transcript|length=2212bp
TGATATTATCTTCGATCCTTTTGATTTACTGAGGAATGGTGAAAATGgaa
ttcaacaAAAGATTTTGTTACTTGTATTGAATCTGCCATTCACAGTAAAC
TCGACTTTTACTACACTATGGAAAAAATCCTGTACAAAATTTTGTTGTGA
TGGTGGCTCTAACAGACTTTTTGATGCATCCAAAGACAGTGAAAACTTTA
TTCCTGATTTCATTTGTGGCGACTTGGACAGTCTGaaagaaacaacaaag
acaTATTATTTACAAAAGaatgTCAAATTAGAATTTTTGTACGATCAGGA
TAATACAGACTTCACTAAGACTGCAATGTTTGCGTTAGAGGAATGTCATC
AAAAAGGAATTGAGTTTGATTGTTTGGTAGCTTACCCAGCATTTGGAGGA
CGGTTGGACCAGACAATGGCTAACATCAACACGATGTTTCAATTGAAAGA
AAAGACCAAAAAACCGTGTTATTTGATCACTGATGATGATATCGCTTTTC
TCGTCGACAAGGGAAAGACAAGAATAAAGGTGGAGAGAGAGTTGAAAGGT
GGATGGTGTAGTTTAATTCCTATCGCATGCAAAGCAGAGAAAGTCACCAC
AACCGGATTCAAATGGAATTTGGACGGTGACTCGATGGAGTTCGGTTCAT
TGGTGAGCACATCAAATGCGTTCGGTGAAAATGTTGATCACGTGACAGTT
GACACGTCACATCCACTGCTTATCACCTTTGGAATCAAAAGTTGAAACTA
ACGCTGGAACTTTCTAGTCAACGGGACaagtagactagagtctacttctg
gctgaactttgctttttgataattttttatgacgctgagtccagtgaagt
agactaggagcatttggcgaggtcgccattttgaaaaaaaaaatttaaaa
atccaaataacaataaaactacttggagttgaaggatataatcaaaaatg
agaaacaaacacgattaacagatttgtaatcccttattctcaaattaaaa
tattgcttcatactgtttttaccttccaaaaacatctaaaatctggcgga
ctgttttacagtccgcctaggcaaaagcatattaccatatactaccgggc
cacttatcagcgccaaaaagtccataaaaaagctctaagtggaccccggg
ctacggGACAagttgaagtttttacaagctcttatttgatttggttggtc
gttaacctgtaataaaataacttttactttttctaaagttttacttcaaa
tgaccaattagtgaagtatcttataaaaactccagctcatcctgGATCAA
CACACATATCGTCAAAGATGAGAAAGTCTTTATGATTGATGCACGCTCTT
ATTTAAGTCAAAACTTGGAGCCTACTTTGATAGATTTGTGGTAACTTATT
CGTGATTTCCGTTTTCAAGGAATTTAGCACGAACTTCTTTGATAAACGTA
CGAACTTATAAATACATGAAGTTGAACACCGGATCGATTCAATCAAAACC
CCAGCCCCAACGACCTCGTCTACCGCGAAAGTTACCTAAAATATAAGCAA
AATGAAACTATGATTATGGCGAGAGGTTGGGAGGCAGGATCAGATCTATA
GCTTCGATGTCACTAGTAAAATCGGGATTGCATTGCAGGCCTTCGGCCCT
TGCACAATCCTCAATTTCACGTCGTGAAATCTCTCTAGATCTAATCCTGC
AGAGCGACATACCTATAATACATAACTTGAAGCCATCGCTTCTAGCCACC
TTGTTCAAAGCTCCTTTTAAAAGTACTTTATCATAACTAGACAGGATCCC
TCCTTAATGTCCCGACAATACCTAGTCTTAAACATTGAATTCGAAGACCA
CAATCCTCGTTTCACAATATCCAGTAAGGGGATGCCCACTGCCTTTGCTT
TTGAGGTAGAAACATACCGTGTTGAATGACCTGTAAAAGTGTACATGTCT
ATCCGCAAGTTTCAACATTGCCATGAGCTATCTGGAAACTGTCTTTACTG
CCACTTGGTCCCGAGGCTTTATATGACTCAACAGAAGCTGAGTATCTTGT
TCAGACCTCCATTCTTTAGACCTCGACAAATACTGGTCAATCGTTTTACT
TCGTCAATTTAATGAAGTGAAACTGGTATGAACTTTTACCTTTCACCAAG
TATCTAGTATCAAATTAACAGATTTTTGAAGCTCTAACAGCAGAAGCCAT
TGCAAGAAGAGA

Run BLAST on NCBI

transcript from alignment at sc0000132:474942..490930-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011797 ID=TCONS_00011797|Name=TCONS_00011797|organism=Clytia hemisphaerica|type=transcript|length=15989bp|location=Sequence derived from alignment at sc0000132:474942..490930- (Clytia hemisphaerica)
TGATATTATCTTCGATCCTTTTGATTTACTGAGGAATGGTGAAAATGGTA
GGTGAGAAAGAAGAATTTTTTTATGTTTGAATTGAAAGCGAAATTTTTTA
AACGTTTACTTGAAATATCTATAATCAGCTATAATCTTGATACTAAGCTT
GACTTTCTGAACAAAAGAATAAGATTATTTAATCACGCCAGCACTGGCTC
ACGGTCAGGATGTCACGTTGAATGTTGAATGTGATAAGCAAGAAATACAA
CCCTGCCAATTCCCCAAACAGTTACATCAAAATGCCTCGAAAATGTCAAT
ATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCATTATAAAAAGGC
CGAGACAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTAAAATGTAATTACCCTTTCCAAATAAA
CCTCTTCGGTGGCGAGCGTAGTCTACTCTGACGTAATTGTAAAATTTATG
TAATGGGAGTTTGACATAGTAATGTAATGTTGTTTGGGGAATTATGAAGT
TCTCTGGGATTTCGATTGCATTTATTCAGGTTGATTTTTTATGACATCTA
ATGGTACTTTTTCTAACGAGTTTGATTACTCTGTTCTCACACTTATGTCT
TTTTTTTTCGCGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAAGA
CATGTAAGAAGGCATATTGATGTAACTGCCAAACAATATGGGGCAAATGT
CCAGGGCAAATGTCCAGGGAACGAAAAAAATATTTCTATCCCCGGACAAA
CAAACCGCGCGACTGGATAAGTGAACAGTGCAGCCGGATAAGTGAGTGCG
TGATCGCGGGTAGACCTGCGGTCGACTAAGTTATTGGTTATATTATAGCG
TGGAAAGCGAGCGAAATAGGAATGGCAAAATTGACGCCCATCATGCAATC
ATCCGATCGTTTAAGCACATCATGCGGGCTTCGCGTTCAGTCTGGGGGAA
GTCTCAAGAAGTAATGTTTAAACCAGTCAGGCACATCCTGGCAAATGAAC
GGGGTGAGCATTTGCATGGGGTATTCGTCACCCAGTGTAAATGAGATAGG
ACGTCTCAGGCTAAAAGCGTGAAAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGA
CCCATGGAAAAAAAATTTCATCTATGCAGTTCTTTGAAATGAAGCAAAAT
ATTTCCAACCCGGTTCAATTAAACTGGGTATTCGGCGCTATTACGTCACT
TGCGTTTTCGACCCCGTTCATTTGCCAATGGTCGCAAGTGAAAAATACCC
CGTTCATTTGCCAGGATGTGCCTGACTGTAAACCCCAGACACGCAACAAG
AAAATCCCTGGAGTCCGGAAATGGAATCGGCAGGGTCGTTAAGAAATTCA
TATAGATGTTTTGGTGGCAATCACAAATATCTTCCTTTCGCGTCGCCCGA
CCGACTCTCGAAAATTAAGTAGAATTGAGTCGGCGAGTTGGCGAATTTGT
CAGACTTTTTCTAACGATGACGTTTCCTTCGTTTAAAAATTTTATTATTG
CCAATTTTTTTGCGAGTGATTTCTAGTGCATTTGCGGCATATTGACTTTG
TTTATCATTACATTCGCCATTTTGGGTCAGAGGTCACAGTGTTCAAAGGT
CATAATTTGAAACCACCCATAACACACGGTTATGTTTTGGCTGCTTGCTG
ACTGGCAGTTTCCTTCAAGAATACACTTCAAAAATGTATGATGGAGGTCA
GACGAGAAGAAGAAATTCATTTATTTTTACGACCGACCGACCGACTCACT
TTTTAGTATGGCGCGCCAAAAGGCTTTTTAATACTAACTTTTTTTTATAA
TACCAACTTTTTTTTATAATATCAACTTTTTTTATAATATCAACTTTTTT
TTTATAATACGAACTTTTTTTTATAATACCAACTTTTTTTTATAATATCA
ACTTTTTTTATAATATCAACTTTTTTTTTATAATACGAACTTTTTTTTTA
TAATACGAACTTTTTTTTATAATACCAACTTTTTTTATTATAATACCAAC
TTTTTTTATTATAATACCAACTTTTTTTATTATAATACCAACTTTTTTTG
TTAGTTTTCATGACACCAATTTTTGTCTCGCTTACTATGCGTGTATAATC
GATCAAGTGTAGAAAGAGTCTTAGCGCGATTACACCTAGCCTGGAGACCA
CTTAAGGTTTTTGATAGACTGGATGATGCCATTTCACAATCGCAAAGCGT
AATGGGTAAGACTTATTATTGNTGATGCCATTTCACAGTCCCAAAGCGTA
ATGGGTAATCAGGGCCACTGCGCGCCGATGACGACTTATTATTGGTCCAA
AGTTTTGAAAAAATTTAAAGATTTTTGCGTCTAGCCAACCGATTTGATTG
GTCTGAAGAATCAATCCACCGGCCAGAGAGAGAACAAACAACACAAATGA
TAAAAATAAGCTGAACTACCAGCAGTCTTTGGACCTTTACCCAAGCAGCC
AACAGCCAAGTCAAGGACAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCA
AAAAAATTGATATTATAAAAATGAAAGTTACTGTTATAAAAAAAGTTGAT
ATTATAAAAAAAGTTGGTATTATAAAAAAAAGTTGCTATTTAAAAAAAAA
ATCTGATATTATAAAAATGAAAGTTTGTATTATAATAAAAAGTTCGGTTA
GTGTAAAACACAGGTCACAGGTCACAGGTCACGGGTCACAGGTCACAGGT
CAGTGTTGACAGGTCAGCTTCAATTACTGTAAAACACAAAGAAAATGTTT
GAAAAACAGTTGTTGATGTCAAAAATATAATTCCAAGGGTATTTTATTGA
TCTAGAACTATTTTAAAGCTAAAAATCTACCCAGGTGCTTACCACGTGAT
TTCGCGTTTTATGCCGTGTATAACACGGACCTGTAATACTTGTATATATT
ACATCTATATCACACATGTAAACAAAATATCTTTTCAATGTTATGCGCAT
TTTACGTATGTTATATGGTACAAAGAATAAAGAAATATTCGAATATCGAT
CTCACCTTTGCTTTAAACAGCCCCCTATCAGGAAAATAGCTATTTCACAA
TCACTATGTCATATCTCATTTNTTTTGGTGGCAATCACAAATATCTTCCT
TTCGCGTCGCCCGACCGACTCTCGGAAATTAAGTAGAATTGAGTCAGTGA
GTTGGCAAATTTGTCAGACTTTTTCTAACGATGACGTTTCCTTCGTTTAA
AAATTTTATATTGCTATTTTTTTTACGAGTGATTTCTAGCGCATTTGCGG
CATATTGACTTTGTTTATCATTACATGCGCCATTTTGGGTCAGAGGTCAC
AGTGTTCAAAGGTCATAATTTGAAACCACCCATAACACACGGTTATGTTT
TGGCTGCTGGCTGAGTGGCAGTTTCCTTCAAGAATACGCTTAAAAAATGT
ATGATGGAGGTCGGACGAGAAGAAGAAATTCATTTATTTTTACGACCGAC
CGACCGACTCACTTTTTAGACCCAACGAGAACGCGAAATGAAGATATTTG
TGATTGACGCCTTAGCAAACACAACAGTCTTTTGAATAACTAATTACTCC
ACAGCAGTTACCTAGGGACAAGATAATTTAACATGTTTTTTATTGGCTGA
GGGAAAGTAATGAAGTAATTAGTTATTCAAAAGACTGTCGCGTTCGCAAA
ACATCTATTGCGTCAGTTGGGTTTTAAGATAAAAACATTTAATTGCTCGT
TTTGCAAATTATTGCCAAAAACTGCAATTTTTTCAAAGATGAAATGCTGA
ATCAGCAGAAAAGTAAAAAAAAAATGAAATAAATGAAAATTATAGTTTTC
TCAGGCAGAAATTATTATCGTTTTTGGTGGAAAAAAAAGTTATTTTATTA
TTGAACACATGGTATTTGACACCCTTGTAAGTAGGCCCACTGTGTCTTGA
TTAGTTCTTTGTTTTTAACTGGTTTTGTCAGTTTGTTGGGAATGCAGGCT
AGCAAATCAAGTCATATGTACCTGCAGTATGTAAACAAACTTAAAATGGT
GGTTATGTTGTTTCTTTCTGGCTGCATGTTTCGGCATTGATGCTGGATAT
TTTTGCATATAGTTTTAGAACTTTTCATGTTATTGGGCAACAAAAAATTG
AAAATATTTTTATTGAAAATTGTATAATTTTATACAATTTTCAAACGCCT
CTGATATCTTTGCCCTTATAAGGCCAACACATTTTGCTTATTCAGCATTT
CATCATTGAAAAAACCGATAATTGCTTTTTCTCTCTTAAATACCTGTAAA
TACCCAACTGGTAATTTTTTGTACTGTTTGTCAGTCTTTTGTAGGGGTAT
ATTTGTTTTATAGGAATTCAACAAAAGATTTTGTTACTTGTATTGAATCT
GCCATTCACAGTAAACTCGACTTTTACTACACTATGGAAAAAATGTAAGC
TTAGGTTGTTTACCAAGTCTGGAAATGGTGCACATCTCCCTGTGGTATTT
TATTGCATTGACCTGTGACAAGTGAATGAAATACAAATAAAAAGCAGAAA
TATATCACACTATATATATCTTTATATTCCTGCTTTCCTTTAGGTTGGAA
GGCTAGTTTTATGTCGATGGTTACCCTTCTAATCCAAACGTCCTTTTTTA
GGGATGAGAAAGATTCAAAAGATAGGATTAGCTGAATCACTGATTAAAAA
AAAGTTTTTCCTTCTCTGGCTTCTAAAGAATTTTCTATCATTGATGCCAA
TCAGTCAAACGTCCTTCTTTTGCTATCTTTAAATAAGGGATACTGCAATT
GAGGGAATTGCCTGACTGAAAGGTTATCAGGATTAGAAGGGGGATTTTCA
CAGATAATAGACGGGTTATAAAAGTGCAAAAAAAAGTATTCCCAGAAATA
TTAAGCAAACAATTATCTCTCTTGTTGTACAGAACAGAGGAAAATATTTT
TGCTAGTTTGTCAAAAATTCTAGAAATGTGCAATGAAGGTTTTGCCAGGA
ATAAGAAAGTTTTGTCATCCTTGGATAATAATTTGGCAAAGGCATCGTTT
CCAGACTTGGTTGTTTTACTTATTATTACTAAGATGTATAATAAACCTTT
CATGGAATGCAAGGAAATTCTGAATATGATTGAAAACTCCACTGTCAAAA
CAATGATAAGAAAATATTCAATTCCTTATATTTGCTAATTATGTTTTCCT
GAGTTCTTATTGTGAAGCTGGAGCTTTTAATTATTCAACGTGACATTGTG
TCATGGCGTTCTAAAGCATTGTCTACAAAAGGTCTATTTTTCCCAGAGAT
TTAATTGCTATCTTTAACTTCAGTATACCCAGCCATGATCTCAACCTTCA
ATATGATTATTAAAAAAATTCTTTATTATTTAGCCTGTACAAAATTTTGT
TGTGATGGTGGCTCTAACAGACTTTTTGATGCATCCAAAGACAGGTATCC
TAGTTTCTCTAATTGCAATTTCTTATAAATATTTGAAATTGTATTTTAAC
CTTAACAATTCTAAATTTTGTCGTAATGGAATTCTACTTTACTGTCCCTG
TTCAAAGAAGAAAGACTATCATTACTCAAGCAGAAAAAGCTTGTTTGAAC
TGTTTTCTTCAAAACGACTAAGCTATGTTTTATATTCTTCCTTTTAGTGA
AAACTTTATTCCTGATTTCATTTGTGGCGACTTGGACAGTCTGAAAGAAA
CAACAAAGACATATTATTTACAAAAGGTAAGTATGAAACCGTTGAAAAAA
CACTTTGTGATTGAGATCTTCAATGCCTCTTCTATTGATCATTAAGTAAG
CAAGAATGACACTCTAAATATTTAAGAACATTTTTATAACGAGTCAAATC
TTTAGTAGCCTTGAAAGCAATTTTGAAAAAATGAACACTATTTTAACAAT
TTCACCAACAATTTTTATTTTAGAATGTCAAATTAGAATTTTTGTACGAT
CAGGATAATACAGACTTCACTAAGACTGCAATGTTTGCGTTAGAGGAATG
TCATCAAAAAGGAATTGAGGTAATCCAATCCTGTACCAAGAATCACAAAA
AAGTGAAGTAACTTAATCTAAGTATTTGTTCTTTTCATTTTCGAGGATTC
TAAGGATTCTAATATTGAAAGTTTGGATTCAAGGTTATGTGATTATTTTA
GTCAAGTGTACAGCGCTTTTTCTTCCAAAAAGAAGATACAGAAAGGAACT
TTTGCATCTCCAAATTAATCAAAATTCTGCTAAATTTGAAGAATCTTGTC
GCATTTCTGTTTAACCTTGATCACTGCTTATTATATGAAAATTAACCATC
CTGTGTGGGAATCGAACCCTGTTTGCCTGCACAGCAAACAATGCTGATAG
CTACTATACCACAACAACACTTTGATAAAGCATAGTTTTAAGACAGAGAA
GACAAATTTTTTATGATCAAAGAAATGAAAGCCGGGAAATCTTACTAAAG
TTCAAGAAAAAGCTATCCTGAATTTCAGATTTATCTTTGCATTATTGAAA
ATGAAATGGATAATTTTAATATTTATATACAATTTGAAATTATATTAACA
TTTTGAAATTATATTAACATTTCGATAAATTTATGTACAGTTATAAAACA
ATTCAGAGGATAAAATTGGCATAATANCGATAAATTTATGTACAATTATA
AAACAATTCAGAGGATAAAATTGGCATAATAAATTTTAAGAGGAATCTAC
AATATAGGCTCCGATTGGAGGCATTGAAATGACTTGACATTTATCAGATT
GTTCTTTTTGTTTGTGGTAGGAATTCATTCCTTCAGAGTCAATATTTTCT
TCTTGTAAAAGTTTCATGAAGCTAAAACCATTAGGATGCGAAGCTGATAA
TGCTTTATTGCTCTGATCTGTAGTGCGATATGATGCGACTGGTTTCGTTT
GTTTTGGTCGAATTTTAACATCGCTCATTGAATTCAAGTCTTTTGTTTTG
AATACTTCAATATTACCTAATAGTGCTTTGAGAGGAATATTTGAGATTCG
AGTGAATTTCCCTTCAGCATTTTTCTGTAATACTGCAATGTTAGTATTGT
CAATAGTATGATTTGCTGGCACTGATATACTACCATTGTTTGGAAAATGG
AATGCTTGGTTCTCGACTGGAGAAGGTTTAAACTCAATTTTGGTGTTTGT
TGGTGCTACCTGGCGCTCCTCCATTCTAGTTTTCTTGAAATTTTCTTTTT
CCATGGTAGTATCGGAATGACATCTCTTCATCCCTTTTGTTTGCTTTTTA
ATAGCCACTTGTTGTGTAGATGGTGGACTTGGATTGATATTTTTGATGTT
TGAAAGAGGAGATCTTTTCTCTGGCTGAATGTAAGGTTGGTGTTGTAATG
TCACAGGTGTTCGGTTATTTGCTGGTAGCTGATGGATTTGATGCTGCTGG
TGATATTGTGGTGTACTATTTGATGGATAGACTGGACTTGGTAATGGTGA
ATTCATATCATTTGATGGTTGCTTGAAGTTGCAATGCTGAGGTTCCGGAT
GGTGTGGTCTATAGTTGGACTGTTGGGGAACTGGATGATATTCTTGTTTG
TTGCTAGGATATGATTGGTTGTTGTAACTGTGGTGCTGCGGTGGAGCATG
TTGTTTGATATTACATCTTTGTACAGAGGGGTCTTGTCTGAAACTGCTTT
GATCGTTTGTTTGACGGTTTTGGCGATCTTGTAGATAGCTGATTTGGTTG
TCAAATGGTTCTTGTTTAATACTACTTTGTTGGTATGCTGAATGTTGTTG
CTGGTAAATTTGTTGCTGTTTACTGTTTCCATTCTGTTGTTGAACCTGGT
TATTCCTTTGCTTTTCGTCTTGAATCATCTTCTTAGCAGGTGCTGTGTGA
CGTGTTGTAGACATTTTGGAGATGAGCATTAATAGTGTTGATTTAGTGTT
GTAGTCTATATCGTCTGCGGTCATAAGGCTACCAGACATTTCAACAAGAC
ATGAATTGTAACCAGAGCAGAAACTGTCTTCTTGTTCTGAACAGAATAAA
AAAATAAGAAATATTTTGAAATAAACGGAGAAACTTTTTCTAATACTTAA
AGTCTTGCTTTCTCAAGCATTCATCAATTTTAGGCATCCAATAAGGCTGA
TTTTAAGAGATGTGTTGAGTGGGTGTTTTTTGTTCAATATTTTGTCGTTT
TTATCGTATAGTTAACGTTTTAAGGTCACAAGTTAACTTCGTCAATCGAA
TTACACGTCGATTATAATGGAATAGCATTTGAAGAATTGATAAACTGTTT
AACATTATGAAATGAATGAGAACAGATGAAGACTTACGTGATTGCTTTCG
TTCTTTGAGGAATTTGACAGTAGACTCCAATACCTCCACTTTGTCTGCTT
TCTTCAAATCGCATCCCTGAAGAAAATAATTAAATCTAATATCAACAGAT
GTAAAATTTGAAGTGATATAGGCTTTTGAATATATAACATTTTATGGCAA
TACCCCTCGCAAATCATATAATAAGATTAGATGGATTAATACATTTTATA
ACCATAAATGGTTAAGATAAGACTAGCGAATTTGGCAAATTACCTTTAGA
AAACTCATCAAAATAGCCAAGATTTATTGGCACAAAAGTTGCCAAAACAA
GAACTATAACGCGTTACCCATAATGCGTATAAGTACAGGTATTACAACTG
TATACAATAAGACATACCGTATTTTCTTGTAGGATGTCTTTGATTTGATC
AAGCGCGTTGGCCATTCGTAATCTTCTCTTTCGCTCTACTTCTTGTTTAC
GCATCTGGAGATAAGAAAGAAGTTCAGTTAACAGTTAGCATGACTACAAA
GTTAAACTTTAGCTCGCTATTCTACTTCTACCTTAGAATGCAAGAAAATA
ATCTGACAGTAATGATTTTGAAATTCAAATTAAAAGGAAAATTCATCGTA
AGTTTTGGTTCGTTAGATTTGTTAGACGCTAGAGCATTACATTATCAGCT
TGCATTACTGGACTATACCTCTAAAACCACTACCGTAATATGAAAAGATT
AAATTTCGAGCACAGTATATTGTCAAGGTTGAAAGTACTTTGTACAAAAC
TTAACAGGAGGGCCTCTTGTTCGATTTTATCTATATCAATGCCGAATGTC
AGCCTTGGTTTAAAAAATATTTGATAAAGAGATCAACGGATTGAAACCCA
TCGAAACCTAATCCTAATTTGAGGGTTCTTTTAAAAGCGTCGAACAATAA
AAAAGCACCTTGTACAAAGACAGAACTCAAAATTCACCTTATTTTTAACA
GGTCCATTTCCATAATCATTCGATTCTTCACCGCTTTCCATTATAAATCA
AAACAAAATTCCCAAAATAAATGAAATTATTTCCCAAAATTATAATATCT
GTTTGTAACCAAAACTCTGCACTCTCTTCCAAACCTTTTTCTCAATAAAA
TGTACGCATGGAAAAGCAAAAGGTTTCATATGAGAAATTGTTTCACTCAT
AAAAAGTAATCTCTCTCTTCTCTCTCAAAATCAACACCTGACGCTTATTA
AGGGGTGGTTTCCATATGACATCAGATTACACAGTACTAATAACCTTACT
GATTATAGAAACCACCCTTGATTGATTAGTTAATTGTTGATACACTAAAG
GAATGGTGTCGGCGTTTATAACAAGTAATTATTAACACTTTATGAAAGGA
TTTCAAAGGATCTCGCTTAACCTATTTTAAATAGACCTATTGACACCTTT
TAACAACTTTACAATAGAATTGTAATAGCACTTACACCTGACGGTGAGTA
AGACGCGCGTCTCTTTTCTGAGACGTCTTTTTAATGTCCCAATGAACGTT
CAAATAAGACTCTCTAGTTTAACGAACGCGCGCCCTCGTGGATTAGATTT
TCTTTTGATCGATTTTGAATTTCCTTTCCCGCAAAATGTAAAGGTTATTT
TGGATTGGCGCCTTGAACTGCCGAAATTTCTATTGTTTTTCTTTTTCTTC
ACCCCCCTGTTATAATCTGGTAATCGTAAATAAAGTTCGCGGATATTTGT
TTCGTTATTAAAAACATGAAAATGAAATATGCGCATGCGTGGATAGATTT
ATTGATAACAAAATATTGAAATTGAAATTGGATTAATCTTTTAACTTGTT
TTTACTTTTTAACAACTGATTTGATAAGCTAAATTATTCAAATTGATTTA
AATTTACATACGGCACGCGCCCAAAATTAAATTATGATGATTTTTACGTC
AAGATTTGACCGTGACGGGTTTTTCCTTCCTCCCCTTAACTTCATTCGTT
GTCAAACATGTTTGTCTATTTAGGTAAGTTCTTTAAATTAAACCTCTCTC
ACTATATAAACCTTTTCTTTAACGAACAAGCAGTACTCCTCTACCGACTC
CGACTATAGATTTATAAAACCCGAAGGGCTAGATGTCGTGCTTTGGACCA
ATCAGAAACTTCGGGGATTTTCAAAAACAATAACGGCAATATTTTTGGTG
ATATTGGAAAAGCTTAAAGCACGACATCTAGCCCTTCTGGCTTTATAAAT
CTATGACTCAGATTCGATTTACACCGACTGTGAAAATTTGCCAACGGGTG
ATAAAAACCCGAGGGGTATATCTCAAAAAAAAATTTTGTACCCTTTTTCA
TTAATCAATTTGAAATCAAAATCATAAAAATCAGAGATAATTAAACAGTA
AATCAGATCTTGTACATTAAATTGTGATTTACAAGTATAGTACCCATCGT
AAAGCCCAAAAAATTAATATTCTCAAATACATGAAACTCTCTCCCCAGAT
ACTAAAGTCAGGATTTTTAAACTAAATGTTTCATAAAAATTAATACCTTA
ATTTCATTAATTTTCGCGAAAATTAAAGGGTGGATGAATTAGTAATCGTT
CTGATCGTGTAGAAATCTCATCTTAGGGCTCTTTTAATAAATGGGACCTC
GTTTCGTGGTAAATATGCCTCTGGGATGTAAAATCTAGCTTGAATACACA
CTGAAAGTGAGTAAAACTCACTTTAAATCGTCAAAACACTCAGAAAATAT
CCAAGAAATTGCAAGATGCGCGAAAATTAAAGGATGCGCGATATTCTATT
TTAAGAGCTGCGTGAAAATTAAAGGCGCGAAAATTAATGGGATTAAGGTA
GGTGAGTTTTTAGATTCCAATGGGTTTAGATTCCTCTCGGGTACCTAATA
GCCGTCCCCCCTCCCGCGAATTAATTTTTCGAAAATTTTCCACCCAGGAC
ATTCTTATTCCAACCCCCCAAGCTTATTAATTTTTGGGAAAATGTTTTTG
AAAGTTCCCTCTTTTGTCCTAATTCGCTGTATTAGCCTCCTTTTCAAAAA
TTTTCCACCCAGGACGTTTTTATTCCAAACCCCCCCCCCGCTTATTTAGT
TTTGAGATTTTTTTCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGAGAGTAGATAGGTTGGTCTAAAAAGCAGGGTACATAGCCAAT
TGCGGTAGCCAATTGGGTTAGGTTGTAGGGTACCCCTTTTTGCCCGAATA
TTTGAAAGCCTATTGTTTTAATTTGTGGAAATACGTTATGAAAATATGTA
ACCTTTTAACAGTCATTTAGAGAAATCAGGTTTTCATTTGCTTTGTAACT
TTAGTCATTTTTGTAAAAAGTACTAAAAAAGTCTACTTTTGTTCACTGAG
TGCTTGTCTTCCCTCCTCTCATAGGTACTTTGAAAAATTACAGACCAGAC
CATTTTTATGATTAAAGGTACAGAGTATTTTTGAATCCCCAACATTCTAA
CAGAGGCTCAAAGTGAAAATCAGAACAATGGGTATTTTCATAGCATCAAA
AGGATGATGATTTACCTTACACCTATATAAGGAAATTACATTTGATAATT
ATACGTAATCGGAAGGTCTTTAGTTCAAATAATGAAGAAAACAAGCTCTG
ACTATGTGCTAAGGTAAACTTTTCTTTTTTTGTTGATTCGTGCAGTTTGA
TTGTTTGGTAGCTTACCCAGCATTTGGAGGACGGTTGGACCAGACAATGG
CTAACATCAACACGATGTTTCAATTGAAAGAAAAGACCAAAAAACCGTGT
TATTTGATCACTGATGATGATATCGCTTTTCTCGTCGACAAGGTTTAAAA
CGATTTCGAAATCGTGTTACTGTACATACAGGGTGTCCGGAAAAAAGTAT
CGAGTCGTACCACTTCTATAGAAAGAAAGTTCTTCCTTGTGTTTCACTAA
ATTTGCAAAGTTTCTCTCTGTGTCATTTTAATTCTCATAAGACATCTTTT
ATGAATAACTTTTACAAAAAACAATTCTTAATAACTTTAGGGTAACTTTT
TTTTAATCATAATGACTATTGTAAAAACAATTATTGTATTGGTATATATT
GTCTTACATTTTGTTAAACACACGCAACAACCTTCTACTCAGAATCATGT
TCGAACTCGATTCTTTTTTTCCGGACACCCTGTAGAATAGAGTCCCTGGC
AAATTAGAAATTAGACGCTTGGTTGGCAAAGGTGATGGAGAAATTTTTTG
AGTTGTAAAATAACTCGTGGAGAAATTCCTGATAATTTTTCTTGCCATAA
AACCAATTGCATGGAGACATGTTCCATGAATGGATATGATTTAAGGAGTT
TGAGGAGAATGCTGCAAAATGTTTCAATAATTTATGTTTGATTTTTGTTC
GCATGAGGGTCATTTTGCATGTAAGATAAAATTATCTATTGTTTCTTATT
TGTGATAAATACAGGGTGTCCCTAATTAAAGTATCGAGTCGAAACACAAC
TATGAGTAGAAAGTTTTATGTGCGTCATTACAATTAATTTATACGTTGTA
ACTACCTTTTGTAATAAGCCTGTGTGATGGAGAACGTTCTTATATTTTAG
CGATAACACACACAAACTTTTCTACTCAATCGCATGTTCAAAATCGATAC
TTTAATTAGGGACACCCTGTACAGGGTGGGCAAAAATATATTTATCTGAC
GAATTTTATAAACAATGAACGAAATGTCTCAAACAATGAAAAACTAATGA
CAGATTAATTTTTTTGGAATGTATTATGTATCATATTCTATGATGTATCT
GACACGAGAAAAGTGTCTAATTGGAACGATTATGAGGATTTTCTAGCGCA
ACTTGAAAAAGAGAAATAGAATTTCTATGGCACTAATTGCTCTGTCATCA
GCATTCTTTTTGTTTGACCATATTTTTTTGCCCACTCTATACTCTATACT
ATAATCTCGCGATATTTCATTTTATTCTCCAGGGAAAGACAAGAATAAAG
GTGGAGAGAGAGTTGAAAGGTGGATGGTGTAGTTTAATTCCTATCGCATG
CAAAGCAGAGAAAGTCACCACAACCGGATTCAAATGGAATTTGGGTAAGA
TTCCTTTCCATACCTTTTTTCGAAATAGTGTCTGCATTATCTAATGTTAC
ATAGACTTAACCAGTATTTTGCTGGTCAACATTAATGGCATCAAACATTC
ATTTGATATTCTGAGTGATGGAATATCTATGTTCATCAAACGTCTAAGCT
CAATGAAATAAATCTTAAAATACTAGTGTCTAGCCCCACAACCGTAGGTT
CCTCTAATCACAGTGGCTTCCCAGATTCCTACTATTTCATTGATATTTAG
ACGGTGACTCGATGGAGTTCGGTTCATTGGTGAGCACATCAAATGCGTTC
GGTGAAAATGTTGATCACGTGACAGTTGACACGTCACATCCACTGCTTAT
CACCTTTGGAATCAAAAGTTGAAACTAACGCTGGAACTTTCTAGTCAACG
GGACAAGTAGACTAGAGTCTACTTCTGGCTGAACTTTGCTTTTTGATAAT
TTTTTATGACGCTGAGTCCAGTGAAGTAGACTAGGAGCATTTGGCGAGGT
CGCCATTTTGAAAAAAAAAATTTAAAAATCCAAATAACAATAAAACTACT
TGGAGTTGAAGGATATAATCAAAAATGAGAAACAAACACGATTAACAGAT
TTGTAATCCCTTATTCTCAAATTAAAATATTGCTTCATACTGTTTTTACC
TTCCAAAAACATCTAAAATCTGGCGGACTGTTTTACAGTCCGCCTAGGCA
AAAGCATATTACCATATACTACCGGGCCACTTATCAGCGCCAAAAAGTCC
ATAAAAAAGCTCTAAGTGGACCCCGGGCTACGGGACAAGTTGAAGTTTTT
ACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCTGTAATAAAATAACTT
TTACTTTTTCTAAAGTTTTACTTCAAATGACCAATTAGTGAAGTATCTTA
TAAAAACTCCAGCTCATCCTGGATCAACACACATATCGTCAAAGATGAGA
AAGTCTTTATGATTGATGCACGCTCTTATTTAAGTCAAAACTTGGAGCCT
ACTTTGATAGATTTGTGGTAACTTATTCGTGATTTCCGTTTTCAAGGAAT
TTAGCACGAACTTCTTTGATAAACGTACGAACTTATAAATACATGAAGTT
GAACACCGGATCGATTCAATCAAAACCCCAGCCCCAACGACCTCGTCTAC
CGCGAAAGTTACCTAAAATATAAGCAAAATGAAACTATGATTATGGCGAG
AGGTTGGGAGGCAGGATCAGATCTATAGCTTCGATGTCACTAGTAAAATC
GGGATTGCATTGCAGGCCTTCGGCCCTTGCACAATCCTCAATTTCACGTC
GTGAAATCTCTCTAGATCTAATCCTGCAGAGCGACATACCTATAATACAT
AACTTGAAGCCATCGCTTCTAGCCACCTTGTTCAAAGCTCCTTTTAAAAG
TACTTTATCATAACTAGACAGGATCCCTCCTTAATGTCCCGACAATACCT
AGTCTTAAACATTGAATTCGAAGACCACAATCCTCGTTTCACAATATCCA
GTAAGGGGATGCCCACTGCCTTTGCTTTTGAGGTAGAAACATACCGTGTT
GAATGACCTGTAAAAGTGTACATGTCTATCCGCAAGTTTCAACATTGCCA
TGAGCTATCTGGAAACTGTCTTTACTGCCACTTGGTCCCGAGGCTTTATA
TGACTCAACAGAAGCTGAGTATCTTGTTCAGACCTCCATTCTTTAGACCT
CGACAAATACTGGTCAATCGTTTTACTTCGTCAATTTAATGAAGTGAAAC
TGGTATGAACTTTTACCTTTCACCAAGTATCTAGTATCAAATTAACAGAT
TTTTGAAGCTCTAACAGCAGAAGCCATTGCAAGAAGAGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006618	XLOC_006618	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000132	supercontig	sc0000132:474942..490930 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.13658	0.0246349	8.56487e-05	0	0.176464	1.46135	0	1.00663	0.645075	1.79395	0.0190022	1.0514	0.481336	1.07752	1.00459	0.856165	0	0	0	0	1.23944	1.86648	0	0	0	0.209617

Blast

[Close]

BLAST of TCONS_00011797 vs. Swiss-Prot (Human)
Match: TPK1 (Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.963e-54
Identity = 101/246 (41.06%), Postives = 148/246 (60.16%), Query Frame = 2

Query:   11 FDPFDLLRNGENGIQQKILLLVLNLPFTVNSTFTTLWKKSCTKFCCDGGSNRLFDASK-DSENFIPDFICGDLDSLKETTKTYYLQKNVKLEFLYDQDNTDFTKTAMFALEECHQKGIEFDCLVAYPAFGGRLDQTMANINTMFQLKEKTKKPCYLITDDDIAFLVDKGKTRIKVERELKGGWCSLIPIACKAEKVTTTGFKWNLDGDSMEFGSLVSTSNAF-GENVDHVTVDTSHPLLITFGIKS 742
            F P + L +  N    K  L++LN P  +++ F  LW K+  + C DGG+NRL+D ++ + E+F+P+FI GD DS++   + YY  K  +L    DQD+TDFTK      ++  +K ++ D +V      GR DQ MA++NT+FQ    T  P  +I ++ + +L+  GK R+ V+  ++G WC LIP+     +VTTTG KWNL  D + FG+LVSTSN + G  V  VTV+T HPLL T  IKS
Sbjct:    5 FTPLEPLLSTGN---LKYCLVILNQP--LDNYFRHLWNKALLRACADGGANRLYDITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKMLQKKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFQATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEGDWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDGSGV--VTVETDHPLLWTMAIKS 243

The following BLAST results are available for this feature:

BLAST of TCONS_00011797 vs. Swiss-Prot (Human)

BLAST of TCONS_00011797 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TPK1	1.963e-54	41.06	Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK...	[more]

You are here

TCONS_00011797 (transcript) - C. hemisphaerica