TCONS_00011764 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011764
Unique NameTCONS_00011764
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3069

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011764 ID=TCONS_00011764|Name=TCONS_00011764|organism=Clytia hemisphaerica|type=transcript|length=3069bp
GAAAACCCTGTTCCtttttcttgaaactttttcaaaaaaataacggACGA
CTTGAGAtgatttttgaatgatttttgaatttttataaatACTTGGGTGG
TTTTAACTGACGAGTAATGGTTTGAGGAGATGTACACACCGTAATTGCGA
TTAAGAATAcgattttaaaaagctttttgaatGCTGGAGTGTGTTATGAG
TAATACCAGTAGCATTGATATGTGCACCTTGATGGAGCATAGAGAAGACT
GTGAATTCGTGAACGTGATTTGTGAGAAAGGCTGTGGAAGCACTTTACTC
AAGTATCAATTGGAATCGCACATTTGTTTGGACCCATCTACACCGTCACT
ACAACAAGAATTGGCACTTTGTAACTCAGCCTTCATGGAGAACGGAGAAT
TCGTGGATGATCACGATTGCACGATGGAATCACGTCCAGGACCTGAGGGT
GAATCTTCAAGAACAATGCCCACTTCTTCAGAGGAACCAGCATCGCCAAG
TATTTCAGGAGATGGCGCttctttgaaattctgtaaatttatcaagcTGG
GTTGTAAGTTCAAGGGAAATCGATTCGAGGTCGATTTACATATGGATATC
GCTTCCGAGACACATTTAGATCTGGTCTGTAAATCTATCAATGAAATCAA
AACAGAATATATTAAGAAAGAAAACAAGGTGATAGCGAAACATGACAATA
AAATTAAACTGGTGCAAGATTATATCTGTAAGCAGAATGTTGTTATCAAA
GATCTTCACGAAACAAACCGTACGTTGGAAACGAACTCAAGAAATATGCA
AAACCAAATCAAAGACTTGGCGTCCAAAACGGAGATGTTTATGGAGGAAA
TTACTCGCTTGAAAGTACAGGCCAATCAACTTCAAGAAGAAATGAATGAA
TCACGTGACACTAATTTCACTGGATCTCTTTTATGGAAGATTAAGAACTT
TTCGAAACACATGCAAAACGCAGTTAATAAAACGGAACTTTCAGTATACA
GCCCACCTTTCTTTACCAGTCGATACGGGTACAAAGTAAGGGCGCAACTT
TTCGTAAACGGACTTGGCTCGCAAACAGGAGAGTACATGGCTATATATTT
CCATATTCTCCCTTCAGAACATGATGATATATTAAGATGGCCTTTCAATC
ACAAAATCACTTTTTCTCTTCTCGAACAAACGCCAGACCAGACGAACGTG
ACGTATACTTTAGTGCCGACGCCGAACGAGGACAGTTATAAACGGCCTTC
GGATAAAATGAGCGACGGAAAAGGTTTCAATCGATTCATTTCGTTGGACG
CCCTGAAAAAAGGGAAGTACATTAAAAATGATTCGATATTTGTCAAAATT
CGAGTTCATTGTAAAAATACGAGCAGGAATCACGAATCTTAGTTTTTTAT
CTAAATTATCTTAACTTATCTTTTGTAAAATAGATTTTCAATCAATCGCT
TTTTGAAGCCCGTCTCTAGTCGAATAAGCCATAGTTCAGGCGAAATATAT
GAAGTCACTGAATAATTTCATGTTTTGAGAATTTCTTGGTTTCCTTCGGG
AAAAATGATGACGACAacttgaaagattgttttagCCAGATCGATTtgtc
tttttttgactttctgtAGAATATCATCTTAAAATAGATCTATattaata
ttatattataaGACTGTAAATTTACAATATAATATTTCTACGTTAAAGAA
TTATTCGATGCATTTGAACATCATCTTGAAAATTAAGAAGCACAATTGAT
CAATAGAAATCAAACTTCCGAAATCGCCTTGGAGAAAATACATGGAGTTA
TCTTCGATATTCCAAGGAATGATCGAACTTCAGGGTTTAAGAAAACTATC
ACCATCCCCATATATTCACAATGCATAATCCATGATAATGCGCcaagaac
aaagaaaatgtcttACTCAAGATTGCAAATAAAATTCAATAGTGAACTTC
ATTCCCGAGGATATTTGGACTTGTATGACAAATCCGTTTGCTCACACTAG
CCAAATTTATCATccaaaatatgttttcatgaTCGATCTTTTGCTTTGCG
TCTATTAGTCGTTGGGTAAAATCGATGAGTCGTCGTAACGACATCAGCTT
TGTCGTACTTTCTGGCAGGTGGCAAAAATTCTTTCATGTTATCTTGAGGA
TATTTCTCCTTGATCTTTTGCCGTGTTCCGTACAGCTTCATATCATGACG
TAATTTAAAGTAATCCATGACGTCATAAGCAATAAGGACAGTCAGTGCAA
GAATGACCAGAAGATCTTGAACGTCCatcctcaaaatgttctttcaGTGG
AACTGCTCCAAACCATCAATCATTTTCTCCCTTTTTCCTTCAAATCGGTT
TTGATATCTTAATATTAAAAGTGATTTGATAAATAAAACCTTAATGTTAA
TCCTGGCCCACTAACCCCTGTTATTCCATTTAACCTAAACTGTGAAAACG
TTCAGCAAACTGTATAATCAAGATAGGaactgtaaaaataaaactgaacG
AATTGATCACTTTCTTTCTTCGACCAAAAGTAAAACTTCAGCCATCGCCA
ATGTTTCCCAAAATTGTTTACCATTTTGATTTAAAGTTCCAGACTCATTt
cttcaagaaattgaaaacttgaaCTTCAAGAAATCTGATCAGAAAAGATC
ATCCCAAAAGTTTCTATATCATCTcataaaagaaattttgaattctCGTC
TTATTTTGATGAAGTGAAGTGAGacaagaaaaaagagaaaaggaaGCATG
AAAAAACTGAGGTTTTGAAGAAAGGAAGACAAAAACACCTGCACCACTAA
CTAGACTAGAAGTAGTTATCACTTTCatctcttttattttaaagtttatc
atatttcaacattttttaccAGTCTGAACTTCCACTTCCAAAACTGTTTA
CTTGTCCTAGCAGTATGAACTTAAAAACTGTAATAAATCGATTGATAATT
GATGAAAAGAATTCCTACTTATCAATAAATTCCATTTGATTCGATGATGA
ATTTACTTTAAATGGGCCCCACAGTTTGGGTGACAAAATGAAAGTTACGT
CCCAGTACACCAATTGAAA
Run BLAST on NCBI

transcript from alignment at sc0000132:221453..230156-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011764 ID=TCONS_00011764|Name=TCONS_00011764|organism=Clytia hemisphaerica|type=transcript|length=8704bp|location=Sequence derived from alignment at sc0000132:221453..230156- (Clytia hemisphaerica)
GAAAACCCTGTTCCTTTTTCTTGAAACTTTTTCAAAAAAATAACGGACGA
CTTGAGATGATTTTTGAATGATTTTTGAATTTTTATAAATACTTGGGTGG
TTTTAACTGACGAGTAATGGTTTGAGGAGATGTACACACCGTAATTGCGA
TTAAGAATACGATTTTAAAAAGCTTTTTGAATGCTGGAGTGTGTTATGAG
TAATACCAGTAGCATTGATATGTGCACCTTGATGGTAAGGTTTGATAGCC
TCATTTTTGCTCACTACTCTTGCATTATCCGCTATATCCATTCGACAACT
TTTAAGAAATTTTCTTAATTTGCATTTTCAGAAGGGAACATATTTATTAG
AGGGTTTGATTTTATATCAGAATTTACTTATCATTTCACTCAATGCTCTA
TTAACCTTCTCAAAGTATATACACTGAATCTTCAAAAATGAAATTAAAAA
TAGAAATATTGACGGATATCTACATCAATTAAAGCGTTTATAAAAAGTGT
CTGTTTCCACGACGATAAAAATGACATCATCTTTTCATTAAAGTGACGTC
ATCTATTTTGATAACAGATAAAATATAGGATTTTGGAACAACAGAGATTA
GATGATTCGCGCTTTTGCATGTATGACCCGCGTTTATAATGTACTAACAT
TTCGAAATAACCAATAAATGAATGCGAAAATACCCCCTGTTAATCTACTG
ATATACTCTGTTTAAAGGTGTATCGACAGGGGGTTAAATGATGACGCTAT
CTACTGTTTTCGAAAACGATATAGCGCGCCAATGTCGACAGATGTTTCAT
TCGGGCTCTCAGTTTGAACAATATATTTGCTTTCTTTCTTTCAAAATCAT
TTTTGTTTTGGCTCTTTGTTCTTTATGATTTGCGATGGGTAAATCGCGTG
CTGGAGATATCAAGAACTACATTAGATATTCCTCATGAAAAAATCGATTT
CTATTTTTCACTGATATTTTCAGGGTTTTAAGAAAAGATCCGCTTATATT
TTATTCTATGTTTTTCGTCTTTTCTCGAATAGTTTGGAACGAGGCAAATA
TTTTTTTAAAGCTCGTGATTTTCATGTTGCTCACTGTTGATCTTTCAGGA
GCATAGAGAAGACTGTGAATTCGTGAACGTGATTTGTGAGAAAGGCTGTG
GAAGCACTTTACTCAAGTATCAATTGGAATCGCACATTTGTTTGGACCCA
TCTACACCGTCACTACAACAAGAATTGGCACTTTGTAACTCAGCCTTCAT
GGAGAACGGAGAATTCGTGGATGTAAGTAAAGCTTTAATGTATATTTAGT
ATGAGATGGTGGACTAATTTGCCAAATATGTTACTGGTACAACAATCACG
TTGTAGAGTTTGAATCGGTCACATACTGGTGTATGTACCAGAGAAACTCA
CTTGCACCTCGCAGCAGATTTTTAAAATCTCATTTTCAGTTTATTAAATT
TAAAGCAAAGCTTAATTCTTATGCATCATCGCAAAAGCAAGCGCTATGAT
TCACGACTATTATCAAGCCAGTGTTTATCTCCTTAATAAACAAACAAAGG
GGTTATTGAGATGTGCCTTCAAACCTCACCATTCGTCACTTACAAGTCAA
CTCGATTTCGCAAAAGATTTCAAAGGATTTTCTTTGATACGTACTCGTGA
ATCAGCAAGGATAATCTAAAAAAAGTTTGTTTTAGTGGCCGCTATTTTGG
ACTCCTTGATGTTTGTGTGCAAGAAGAGAGACTTTTTATGAAGAGTTGTT
TATTCCTGCTCAGACAATATTTCACAATATCACGATGGATGTTTGGTGAC
GTCTTCGTCTTTTTACCGGCTGTTGTTTTTCTGAACAAGCTTCTGTTCCT
TTTTTGATAATGGAACGAGGAAGGACCCCCTTGGTCGCTTACAAGGCGCC
ATATTGTGTCTTGTTGTATGTCTCGTATGTTATACGATCGAATGATGTAT
GATTGATAAAATAAAAAATATATGTGAAGTTTGTTTAGTATCATGTTCAG
TCTTCTCATCTAAGTTGTGAATCAATCTTTCTTTCGATCGGTCGATCGGT
ATCTACAGACGTTCGATCATGCTGTGTGATCTTACGTTGATTCACCTTCG
CAATAAGAAACAAAAAATCCAGTTTTGCACAGTTTGTGTCAAGAGGAGAA
ATTGATTTTGGAAGTCAAACAATTTATAACGTGGCAGAAGATTAAGAGGT
GATTTTGGGGTAATCGATTTGGTACTTGAGTTTGTGACAGAGTGACTGCC
TTTTTTTTGATTAAGAGATTTACATTTTTAGTGAGTGTTGATTGAAGAAT
GAATGGATAAAAGAAATTCGAGATGACAGCCTGCTTCATTTCTGTGATGA
TTGATTGCTTAGCTTTCTATTCCCTTGCTTTTTGATGCAGGGATGCTTCG
AGTGTTGAGGTCAAGAGGATAGCTTATTTGTTTTTATTTTGTTCCGAATG
TTGAAAAGATAATTTTAAGTGTATATATAAAGTTGGTCAATCTCAGTTGA
AGTTTGAATATGTAAAAGAAAATGAATTAAAAATGACGAAAGCTAGATCG
ATTGACCTTCCATACCACATAAATAGTGAATGGAACAAACACCTACTTGG
TGACGTCGACCATTGCCAACTGAATTTCAACATTCACACTTTAGTTAGTT
GCCACCTGATTCAATCGGAATTGAACGATTGCTAAATGTTGAAAGAAAGT
CAAGGGAATATTTAAGAGAACTTCTTTACGAGAAATTTTACTGTAATTTT
CAGAAGATTTTTTAAATAGATAGATGGTGAAATTACAAAGTAAGTAGCAT
CGACCTGAAATTAAAACCTTTTTTTCTAAAAACGATGACCTGGCTTTTGA
TTACTGACATTTTAAATGTTCAGTATTCTTTAACTTTCACGTCTCAAAAG
CTAACTATCGCCAAAAAGTCGTGACAAAAAAAAAAAGTTTACGGAAGTTT
CGTGACGATTTTAAGGAAAATTGAGGCTGCCAAGACAAACTTGGCGTATA
CAAAGAAACTTTGTTTAGAAACGTGAAATATATTCACACTGCAAACATTG
AAGGTTGGTACAAGTAGAGATAAAGACTACTTCAGTTGGAGCCAGCATAG
AATACAGTATGCTTGAGTTCTAATCCAACTTATTCCATAGTACTTGAGCA
AAAAGAGTCAAAATAAGTTCAGTGAATACTTATGTGAGAAATGGTAACAA
CTGATTCNGTCAATCTCAGTTGAAGTTTGAATATGTAAAAGAAAATGAAT
TAAAAATGACGAAAGCTAGATCGATTGACCTTCCATACCACATAAATAGT
GAATGGAACAAACACCTACTTGGTGACGTCGACCATTGCCAACTGAATTT
CAACATTCACACTTTAGTTAGTTGCCACCTGATTCAATCGGAATTGAACG
ATTGCTAAATGTTGAAAGAAAGTCAAGGGAATATTTAAGAGAACTTCTTT
ACGAGAAATTTTACTGTAATTTTCAGAAGATTTTTTAAATAGATAGATGG
TGAAATTACAAAGTAAGTAGCATCGACCTGAAATTAAAACCTTTTTTTCT
AAAAACGATGACCTGGCTTTTGATTACTGACATTTTAAATGTTCAGTATT
CTTTAACTTTCACGTCTCAAAAGCTAACTATCGCCAAAAAGTCGTGACAA
AAAAAAAAAGTTTACGGAAGTTTCGTGACGATTTTAAGGAAAATTGAGGC
TGCCAAGACAAACTTGGCGTATACAAAGAAACTTTGTTTAGAAACGTGAA
ATATATTCACACTGCAAACATTGAAGGTTGGTACAAGTAGAGATAAAGAC
TACTTCAGTTGGAGCCAGCATAGAATACAGTATGCTTGAGTTCTAATCCA
ACTTATTCCATAGTACTTGAGCAAAAAGAGTCAAAATAAGTTCAGTGAAT
ACTTATGTGAGAAATGGTAACAACTGATTCTTTTGTGATTTGTGTTTGTC
TGTTTTGTCATTTGACAAGTGATTGGAGCAAACCTAAACATCCGAATGAA
TCCATCAGTCAACAAGATATGTGATCTCATGTATTTTATACCATAACCCT
CGACTTTTTCTCTTCGCTTCATATAGTCTCATACGCACACATGGCTTGTG
ATGTGCGGTCGATACATGGTTTTCTATTTTCGAATGGGTAGACAAGAAAT
ATAGAAGGTTTTGAGTTTGGTCAACAGTAGACTAGAGTAGTTTGAGAATA
TAGGACTCTTCGTTGCTTTAGTGACTGTTACCTGACACTGTTATTATATT
TGGTTCTTGTGAAAATATTTTTGTATGAAAGTATGAAAGAATTAAAAAAC
AAAACGGGTATGATTCGTTTACGAATGCAGAAATACATGGAGAGAATAAG
CGGTGATGAAAGTGCTGGTAGTGCTGGTGGTGGTGGTGCTGGTGGTGGTG
GCAAATATTACGCCAGTGAAACAATCACCGAAGAAAGTGAAAACGATATC
GACGTAAGTTCATGGTGTAAAGAAAGAAAGGAACTTGAACTCTTTTTTTA
CTTACTGGGGTCATTGAGGCTCAACCGGATTGTAATTTTACTAATTCTCA
TTTAATTTCTACTTGCAGGATCACGATTGCACGATGGAATCACGTCCAGG
ACCTGAGGGTGAATCTTCAAGAACAATGCCCACTTCTTCAGAGGTAAGGG
ATGAAACTTGTGACGGATACCAAGGGATGATGTTTCCAAATAGGGTTGCA
AATGGCCCCACACTTCGAATGGTCTTTATAAGGATTACACTTCATCTTAA
CTCAATGAACAAATGAAACTTTTGAGGATGATGAGGTTCATTGACCACAA
GGGGCGTTCTTTAACGTGCTTTATGAGATTTTTATGACCAACAAATGATT
ATAAATTTGAATTTTTTTCTCATGATTTCCCATGGTATGGCTAAACTATG
AATGGGTTTAGAAGTATTGAGCCCTTCAACGTTATGATTACATGACATGG
GCCTGTTCTGTACGATTTCTCTGTTGATAAATTTTTGTAAAAGAAGGTGG
TTCAATTCCTTTTTTGAAGTAAAATGTTTCTTAGGATTTGTCCGTACAAT
ATCTTGTTTCAGTTTTGAAGTTTGAAACTGAGATTAGGCCAAAGGGGAAA
GATTCTTTCCTCTAGGGAAACATAATCTTTGGGAAATATTTGAATTCTAA
AGAAAGTTTATTTCTCTTTTTTTCGTGAGCAGTGAAAAATATCATTTTTC
GTTATGAAGGATGTCAAAGTTTAAATCCCTTTTCTTCATCCATCCATCAT
CAATTCTCTTTTCCATTCTCATAATCGGTTGAGATACAACACAGATGTTT
TGTGTCTTTCTTTTTCCTGTTCCTCAACTGATAGTATACTGAGTATATCT
TGTTCGAGCAAAATATAATGTTCAAGAAACTTTTTTTCGGGATTTGCTTC
AGGGTTGAAACATTTTTTAACGTTTTTTTTTAAATTGCTCGATTAACTAA
AGGAAACAAGATGCAAAATAACGAACAAAAAGTAAAATCAACTTTGATAT
TTTCTGGTGTGAAATCATTATTTGACTGACTCTTGCTTTATTAAGTTATT
GTACATATTAAAATCCCACTTCAATACAACAAAATTTGTACTTTTAAAGT
AAAAAAGCCTTGTAAGATTAAGAAAACAAACATTTTCGAAGATCGTATTC
TTGATCCCATGTTGAGATAACTTCGTTTGTTTGGATTTTCGTTTACAAAA
AATCATTAAAATATCAGAAAAAAAGTTAGAATCTGAAGAAATTGCTTTTA
ACCTACTAAAATAAAAAAGACTTACCTACGCACTTAAACGCCCCTTCATT
CAAAATCAGTTTTTTATCTGTTAATTTTGTTGACAATTGTTGAGATTCTG
TCGCAATTTTAAGCTATAGAATTATTATTCACGTACCATCTTCCTCCTGT
GCAAGAAATTCATTACAATTCTTTTCCTTACCGTCAATAGGAACCAGCAT
CGCCAAGTATTTCAGGAGATGGCGCTTCTTTGAAATTCTGTAAATTTATC
AAGCTGGGTTGTAAGTTCAAGGTAAGAAAACAACAGAAATTTCACTTTAC
AAATACTCGAGTCATGGTGAAAAAAATATTGACTAACCCAACTAGTCTAA
GAATGTGTGACCAATGATGATTCTGTCACTTTTTTCGATCGAATCGAGAT
ACGCTTACAATCATTATCTTCATTCTCTTCTTCCTTTTTATTATTCCAGG
GAAATCGATTCGAGGTCGATTTACATATGGATATCGCTTCCGAGACACAT
TTAGATCTGGTCTGTAAATCTATCAATGAAATCAAAACAGAATATATTAA
GAAAGAAAACAAGGTGATAGCGAAACATGACAATAAAATTAAACTGGTGC
AAGATTATATCTGTAAGCAGAATGTTGTTATCAAAGATCTTCACGAAACA
AACCGTACGTTGGAAACGAACTCAAGAAATATGCAAAACCAAATCAAAGA
CTTGGCGTCCAAAACGGAGATGTTTATGGAGGAAATTACTCGCTTGAAAG
TACAGGCCAATCAACTTCAAGAAGAAATGAATGAATCACGTGACACTAAT
TTCACTGGATCTCTTTTATGGAAGATTAAGAACTTTTCGAAACACATGCA
AAACGCAGTTAATAAAACGGAACTTTCAGTATACAGCCCACCTTTCTTTA
CCAGTCGATACGGGTACAAAGTAAGGGCGCAACTTTTCGTAAACGGACTT
GGCTCGCAAACAGGAGAGTACATGGCTATATATTTCCATATTCTCCCTTC
AGAACATGATGATATATTAAGATGGCCTTTCAATCACAAAATCACTTTTT
CTCTTCTCGAACAAACGCCAGACCAGACGAACGTGACGTATACTTTAGTG
CCGACGCCGAACGAGGACAGTTATAAACGGCCTTCGGATAAAATGAGCGA
CGGAAAAGGTTTCAATCGATTCATTTCGTTGGACGCCCTGAAAAAAGGGA
AGTACATTAAAAATGATTCGATATTTGTCAAAATTCGAGTTCATTGTAAA
AATACGAGCAGGAATCACGAATCTTAGTTTTTTATCTAAATTATCTTAAC
TTATCTTTTGTAAAATAGATTTTCAATCAATCGCTTTTTGAAGCCCGTCT
CTAGTCGAATAAGCCATAGTTCAGGCGAAATATATGAAGTCACTGAATAA
TTTCATGTTTTGAGAATTTCTTGGTTTCCTTCGGGAAAAATGATGACGAC
AACTTGAAAGATTGTTTTAGCCAGATCGATTTGTCTTTTTTTGACTTTCT
GTAGAATATCATCTTAAAATAGATCTATATTAATATTATATTATAAGACT
GTAAATTTACAATATAATATTTCTACGTTAAAGAATTATTCGATGCATTT
GAACATCATCTTGAAAATTAAGAAGCACAATTGATCAATAGAAATCAAAC
TTCCGAAATCGCCTTGGAGAAAATACATGGAGTTATCTTCGATATTCCAA
GGAATGATCGAACTTCAGGGTTTAAGAAAACTATCACCATCCCCATATAT
TCACAATGCATAATCCATGATAATGCGCCAAGAACAAAGAAAATGTCTTA
CTCAAGATTGCAAATAAAATTCAATAGTGAACTTCATTCCCGAGGATATT
TGGACTTGTATGACAAATCCGTTTGCTCACACTAGCCAAATTTATCATCC
AAAATATGTTTTCATGATCGATCTTTTGCTTTGCGTCTATTAGTCGTTGG
GTAAAATCGATGAGTCGTCGTAACGACATCAGCTTTGTCGTACTTTCTGG
CAGGTGGCAAAAATTCTTTCATGTTATCTTGAGGATATTTCTCCTTGATC
TTTTGCCGTGTTCCGTACAGCTTCATATCATGACGTAATTTAAAGTAATC
CATGACGTCATAAGCAATAAGGACAGTCAGTGCAAGAATGACCAGAAGAT
CTTGAACGTCCATCCTCAAAATGTTCTTTCAGTGGAACTGCTCCAAACCA
TCAATCATTTTCTCCCTTTTTCCTTCAAATCGGTTTTGATATCTTAATAT
TAAAAGTGATTTGATAAATAAAACCTTAATGTTAATCCTGGCCCACTAAC
CCCTGTTATTCCATTTAACCTAAACTGTGAAAACGTTCAGCAAACTGTAT
AATCAAGATAGGAACTGTAAAAATAAAACTGAACGAATTGATCACTTTCT
TTCTTCGACCAAAAGTAAAACTTCAGCCATCGCCAATGTTTCCCAAAATT
GTTTACCATTTTGATTTAAAGTTCCAGACTCATTTCTTCAAGAAATTGAA
AACTTGAACTTCAAGAAATCTGATCAGAAAAGATCATCCCAAAAGTTTCT
ATATCATCTCATAAAAGAAATTTTGAATTCTCGTCTTATTTTGATGAAGT
GAAGTGAGACAAGAAAAAAGAGAAAAGGAAGCATGAAAAAACTGAGGTTT
TGAAGAAAGGAAGACAAAAACACCTGCACCACTAACTAGACTAGAAGTAG
TTATCACTTTCATCTCTTTTATTTTAAAGTTTATCATATTTCAACATTTT
TTACCAGTCTGAACTTCCACTTCCAAAACTGTTTACTTGTCCTAGCAGTA
TGAACTTAAAAACTGTAATAAATCGATTGATAATTGATGAAAAGAATTCC
TACTTATCAATAAATTCCATTTGATTCGATGATGAATTTACTTTAAATGG
GCCCCACAGTTTGGGTGACAAAATGAAAGTTACGTCCCAGTACACCAATT
GAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006608XLOC_006608Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011764-exon-sc0000132-1575043694:229923..230156TCONS_00011764-exon-sc0000132-1575043694:229923..230156Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1575043694:228885..229058TCONS_00011764-exon-sc0000132-1575043694:228885..229058Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1575043694:225514..225588TCONS_00011764-exon-sc0000132-1575043694:225514..225588Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1575043694:224136..224216TCONS_00011764-exon-sc0000132-1575043694:224136..224216Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1575043694:221453..223957TCONS_00011764-exon-sc0000132-1575043694:221453..223957Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1510915933:229923..230156TCONS_00011764-exon-sc0000132-1510915933:229923..230156Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1510915933:228885..229058TCONS_00011764-exon-sc0000132-1510915933:228885..229058Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1510915933:225514..225588TCONS_00011764-exon-sc0000132-1510915933:225514..225588Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1510915933:224136..224216TCONS_00011764-exon-sc0000132-1510915933:224136..224216Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1510915933:221453..223957TCONS_00011764-exon-sc0000132-1510915933:221453..223957Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1491911889:229923..230156TCONS_00011764-exon-sc0000132-1491911889:229923..230156Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1491911889:228885..229058TCONS_00011764-exon-sc0000132-1491911889:228885..229058Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1491911889:225514..225588TCONS_00011764-exon-sc0000132-1491911889:225514..225588Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1491911889:224136..224216TCONS_00011764-exon-sc0000132-1491911889:224136..224216Clytia hemisphaericaexon
TCONS_00011764-exon-sc0000132-1491911889:221453..223957TCONS_00011764-exon-sc0000132-1491911889:221453..223957Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:221453..230156 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39315	0.247603	0.072294	0.0538187	0	0	1.06317	0.505708	0.276063	0.37232	0	0.623705	3.10525	3.30993	0.865563	1.07104	2.34755	2.18563	8.85216	5.60457	2.8113	4.71369	0.556102	0.726905	2.49007	3.06357	1.43094	1.51151	0	0.494867
Blast
[Close]
BLAST of TCONS_00011764 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.045e-34
Identity = 108/433 (24.94%), Postives = 195/433 (45.03%), Query Frame = 1 
Query:  229 LMEHREDCEFVNVICEK-GCGSTLLKYQLESHICLDPSTPSLQQELALCNSAF-MENGEFVDDHDCTMESRPGPEGESSRTMPTSSEEPASPSISGDGASLKFCKFIKLGCKFKGNRFEVDLHMDIASETHLDLVCKSINEIKTEYIKKENKVIAKHDNKIKLVQDYICKQNVVIKDLHETNRTLETNSRNMQNQIKDLASKTEMF----------MEEITRLKVQANQLQEEMNE-----------SRDT----------------------------------NFTGSLLWKIKNFSKHMQNAVNKTELSVYSPPFFTSRYGYKVRAQLFVNGLGSQTGEYMAIYFHILPSEHDDILRWPFNHKITFSLLEQTPDQTNVTYTLVPTPNEDSYKRPSDKMSDGKGFNRFISLDALKKGKYIKNDSIFVKIRV 1356
            L+  + DC F  + C +  C   +L+  L  H+  + +    +   + C S   M   +  +D DC       P   S +T+   SE  A  S   +  S   C F + GC F+G   ++  H   ++  H++L+ +  N ++ +    +N+ + K +  I+ + + IC   + I+   E  R  E+   ++Q  I   A K +             EE   +K     LQ  + E           +R+T                                  ++ G L+WKI+++ +  Q AV    LS+YS PF+T  +GYK+ A++++NG G   G +++++F I+  E+D +L WPF  K+T  L++Q   + ++     P PN  S+K+P+ +M+   G   F++   L+ G YIK+D+IF+K+ V
Sbjct:  134 LVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHV--EKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTL-LRSELSAHLSECVNAPST--CSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEK-NKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIV 560
The following BLAST results are available for this feature:
BLAST of TCONS_00011764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF32.045e-3424.94TNF receptor-associated factor 3 OS=Homo sapiens G... [more]
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