TCONS_00011740 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011740
Unique NameTCONS_00011740
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2074

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011740 ID=TCONS_00011740|Name=TCONS_00011740|organism=Clytia hemisphaerica|type=transcript|length=2074bp
attcaagatggcggcatTTTCAATGTAGACTCgTGCTTCAACACGTCAAT
TCATACAAAGAGCAAGATATATAGTGATAACACAGTCAATGCTCTCCAAT
TTGACGCTTATTGTGAAATGGCTTTTCCTTTAGCCTTTTGAGCTCTGTGC
CAAGTCATGACACCCCCTAGGGAAATTTTGGGGGCTTTGTTTCATCATCA
TTTAAAAAGTCTGTATAGTGAATAGAGATAACTAAAATAAGATGTCAGAA
GAAATGGTGAATCTTTTTGGCAGTGGCAGTGACGACAGTAATGATAATAA
CATGTCATCACCTGAAAGAGGTGGTGACAATAATGAACAACAAGGTGACA
ATGATGGCCCACATGAAGAAATGCAATCCACTCAATCACAAATGAAGGAT
TTATTTGGTGCAGAATCAGATGCTTCAAAAGATAGCAGTGACAGTGCAAC
TAGTAGTGATGAAGGAAATGCAGCAGAACCAAAAGCTTCATCGGATGTTA
ACTTTGATGAGCCAAAAGAGGAGAATAGCGACGAGGAAGGGCGTGACCCT
CCACAACAAGCAAGCAGTGACAGTGATAGTGACATGGGCATTGGAAGAAA
TAAATCAAGTACAGGAGGTGGAGCCAGTGCTGCGCCCACCACTCAAGATC
TTTTTGGTGAAGATGTCTCCTCTGACGAAGAAACTCAAGACAAACCATCA
ACATCATTTCGACCTGATATATCACCTTTGTCCGGTGATGAAGATTCAAT
GAGGTTCAGTGAGAGGAGAATTCCAAGTCCTTCCAAAGACAAAGAAGATG
AGGAAGAAGAAGACGAAGGACTCTCAATTTCCATCGAGCTTCCACGCTGT
AACATATCACTGGGTAAAGAGCTGTACTTCGTTAAACTACCCAATTTCTT
GAGTGTGGATACTAAACCATTCGATTCGAACTATTATGAAGATATTTCAT
CAGACGAGGACGAAATCTTGGATGAAGAAGGAAGAGCTAGATTGAAACTG
AAGGTGGAGAACACAATTCGCTGGCGTTACTCCAAAGATAAGGATGGTGA
AGAGATCAAAGAATCAAACTGTCGTTTCGTTCGTTGGTCTGATGGCTCGC
TGTCCATGCATCTTGGTAACGAAGTGTTCGATGTCTTCAAAATGAAAGTC
GACGGTGAACAAAATCACCTCTTCGTTCAACAGGGAACAGGTCTTCAAGC
ACAAGCTGTCTTCAAGAACAAACTCTCCTTCCGTCCTCATTCCACTACCT
CTCAAACACATCGAAAGATGACGCAATCTATTGCAGACCGTATGAACAAA
GCACAGAAAGTCAAGATGATGCCTGCTATGGAAAAAGATCCTGAATCACA
ACGAGAATCTGCTTTGAAGaAAGAAGACGAAAGATTACGAGCAGCTAACC
GTCGTGAAAGTCAACAACGACGCATGCGCGAGAAGAGCCATTTGAAAGGG
TTATCGTCAGGTTATTTGAATGACAATGATGATGACGACGGTTATGAGAA
CAGCATCGCTGCCATCAAAGCTGATTATAAAAATAAGAAACGTCGACCAT
TAGACATTTACGATGACGACGAAGACGAAGAAAGTGAGGACAGTGCAAAA
GAAGATCGCCTTCGTAAAGCCAAACAACTGAACGATGACGATGAGGATGA
CGACGGCGACGAATTTGATGCCGACACACGTCGTAAGAGAGACGAACTTG
CTACGCGCAAAAAGAAAGCTGGTCGGAAGATTATTGAATCAGATGAAGAT
TCGGATGCTGAGAGTGATTAAGGGTGATTATCGATGAATGATGGAGCTCG
TCCTACTTTTCTAGGGTGCTATCTATGATGTGCCTAATGTATATAGCGGT
CAGATTTTGTGTTATGACAGGTTTACCTtgagggctctgaccatagtcgg
aaaattaattttagtatctgaacataaaagttatgttttagattctttaa
cacttttgacaaagaattgcctttataaattgctttttaatcaaacccct
taagagtaattttaagaatttaattgcaaaaatgacattatcaactttaa
aaagacgttaataatatgttgcat
Run BLAST on NCBI

transcript from alignment at sc0000132:491320..499797+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011740 ID=TCONS_00011740|Name=TCONS_00011740|organism=Clytia hemisphaerica|type=transcript|length=8478bp|location=Sequence derived from alignment at sc0000132:491320..499797+ (Clytia hemisphaerica)
attcaagatggcggcatTTTCAATGTAGACTCgtgagtttttgtttttgt
ttttaaatattctttcagACTTTTAGTGTTTAGTTTTCCATGCTCTCTTC
TTTATATGTTTATAGTACCAAATCAAGGTACAGATATTTTTTATACACTT
TACCTAGGATAGGTGCATGCATATTTCTAGCGGTATTCTACTTGCTGTAC
TTGGTGCTAACTCCTTTCTGCGTTTTTTCTTCGATTCGTAAGTAGATTTT
TTGTTATTCAATCCGTACGGGTGAAAATCGTTTATATTGGTTAGGATCAG
GGTTGGAGTTCGAGAGTCAAAATAGGCATTTAATAAAAATACTTCGATTT
GTGAAGCATCTTTACGTCACatagaacaataaataaaagaaaatagcaaa
agaacgaAGGcaaggaattacccatagccacCATTTTGCAACCATATGGG
GAATCTCGATTTTACAGAAATGGGAATCCTGATATTGActaaagcatctt
ctgaaaatttcattcttccccataaatagaccttttcaactttccatccg
ccatattgaactgtatgcaaaaattatggtggcaattttcaataaagggt
acatgaaaaactcaaacgggactcaatgcgggttaagtaaataaaaactc
gtagcgaatgatgattcaaagaagtgcttagctatcaaaaactttttccg
acaTTTTTCCGTACAAGCAGTACATAACATGTCGCTGCTTTGTATATTTG
TTTAAGATTTTATTTCTTATCCTTGGTTGAGTGAGAAAATTAACTCTTCT
TTTCTTGtgtgtaagtgcactttatagttttgatttccattgaagaatca
tattctggtttttatgttattagatgctgttttagagttAGAGCTAGCCT
GACGAAGAAATCCCTACATTAATGACTTTCTAATGAAAATTAATTCTGAC
ATCAGTTATTCAAAATATTATATGATGTGtcgtaaattttcaaatttaaa
aaggtgTGGCACTTTCTACGAAATAGATATAAAgatgagatttttttaaa
tcaatgcaCAAGTAAAAACAGAGGTTTTCTGCGCGAGAAGTGGATATAGG
TTGTTGCCCCGTTAAGATATGCCTCTGattatttcttttgaaatcaaagt
atttattattttattatttaaggTGCTTCAACACGTCAATTCATACAAAG
AGCAAGATATATAGTGATAACACAGTCAATGCTCTCCAATTTGACGCTTA
TTGTGAAATGGCTTTTCCTTTAGCCTTTTGAGCTCTGTGCCAAGTCATGA
CACCCCCTAGGGAAATTTTGGGGGCTTTGTTTCATCATCATTTAAAAAGT
CTGTATAGTGAATAGAGATAACTAAAATAAGATGTCAGAAGAAATGGTGA
ATCTTTTTGGCAGTGGCAGTGACGACAGTAATGATAATAACATGTCATCA
CCTGAAAGAGGTGGTGACAATAATGAACAACAAGGTGACAATGATGGCCC
ACATGAAGAAATGCAATCCACTCAATCACAAATGAAGGATTTATTTGGTG
CAGAATCAGATGCTTCAAAAGATAGCAGTGACAGTatataatgtttttaa
tttcaaagtTATATTAGATGCCATAAAATGAATAGAACCACAAAGTGCTC
CAAAAATATATCCGGAAATAATGAAATTGCTGGGACAAAAGTTTCTTGGT
ACTGTTTACATATGATTAGAAATATTCAGAATAATAAAAAACATCGATGA
TCCTGGATAAGCTATTCTTCTTCAATATTCTcactttttcctatttttta
ccaaaaacaGTACTTTTTGGCATATCTTTCAAGAGTTGTATAATACAACA
TACCATTTAAGTTTTCTTCTGAAACTGGTAATAGTGTTGTATATTGTTAG
ACTCTAGgtagaaaaataatgaaaactttaGGATTAGTTATGATGGATAT
AAATTCCATATAAATTCCCTCCTCTTTTTCTAGGTGCAACTAGTAGTGAT
GAAGGAAATGCAGCAGAACCAAAAGCTTCATCGGATGTAAGTAAAACAAA
TTTGGTCTGAAAAGTTGCAATTTCAGCAATTTCTAATGGGTTCATGTAGA
AATACCATGTTCCTTCAAAAGAATCTATTAGTAATTTCCCTTTAAAAATA
CAGGAATAGATGGCTTCTGTTAAATAAAAACagaaattttcctttaaaaa
tacggataaataaaaatatttgggaaatttgtccaaaatacgatctctcg
cttaccagaccccttttttgAACGTGGTGTTGTATTTAtacggtacaata
tgaaatacagcatttatgtatgCGTTataagccaatcagattgcttatat
ttttcgTGTTGAtgataagcaaacgatatcactcttatttaaaaacaaaa
cctttaagcaaTTGAAATAAAAGCATTGAAATTTGAGTTCTCCCTTTAAC
AGCTATTTGCAGTAAACTTCCAAATTCTCACAAGTCAAATTCAAAATGAG
TATATAAATGCAGGGGTTGAAAAGATACTCAGACCCTTATAACCTCCATA
AAAGTAGATGGGAAACGGggctaaattcaaaatttaattttaaaactgTA
ACCACAAGATATTTAACTCTGTAAACAAACTAAAAAACATATATGATAGG
TATTTCCAACCTGTTTTTATTACTATTTTGATTAATTTGTTAGCTTATTT
TAGAAATTCATTAGGTCAAAAGAAGAGCTCAAAAGAGCGCCCATGACACC
TTTCTTTTTGCACATCTTTTATAATATGTCTTCATCTTTTTTGGGTCAAT
CTATATAGGAATGTCTCAATTCAGTCAAAAGTTCCTCAAAAGCTTTTCCA
AGATGAGAAAAAGTCATTAAGTCTTGCTAATTGTTTGGTTTTTATAACTA
CAAAAGTCTGTCCCTTGAACATTACTTTATACAACAGGTTAACTTTGATG
AGCCAAAAGAGGAGAATAGCGACGAGGAAGGGCGTGACCCTCCACAACAA
GCAAGCAGTGACAGTGATAGTGACATGGGCATTGGAAGAAATAAATCAAG
TACAGGAGGTGGAGCCAGTGCTGCGCCCACCACTCAAGATCTTTTTGGTG
AAGATGTCTCCTCTGACGAAGAAACTCAAGACAAAgtatgtttttttctt
gaacGTTTGAATTCGCTTCAATGGTCACACTTTCTTGCCTAATTGATTCC
GTCTATTATGTATGGCAAAATCATAATAATCCAAGCTGTCCCATAGGGGT
TACCCATTAAACTATATGAAAATTATCCAACATGAGTTTGATATAATCag
gatatttctttacttttttgtaTTCTCTTAAATATTCTCTTCATAATTTA
GTTATTTGCATAATTGCTTCTTTGGCTGCCAAAAGATTACATTGAATTAT
ACTGAGCACATACAATTTTTGTCATTATTCTTTTTTCTACTAGCCATCAA
CATCATTTCGACCTGATATATCACCTTTGTCCGGTGATGAAGATTCAATG
AGGTTCAGTGAGAGGAGAATTCCAAGTCCTTCCAAAGACAAAGAAGATGA
GGAAGAAGAAGACGAAGGTCTGTACACACCTCCTTTTTTGGCTAATGTTG
GctaaaattggctaaaattgGGATGTTCTCATTATTGTTTGCGATTTTCA
GACGGCGTTCGGTGCACGTGTTTCCGTTTAGCGAGATTCGGCTGCTCTCA
TTTTTCAAACATCAGGCTTGGATGCTCTTAAAAATTGACTCGAAAAGTAC
TTATAATCTTTGATTTGAGGCATGCATTGTTCTTAATTAGTTCTTAGGTT
CTGGCCAAAATTAAGTCTTGTCATGTTCTCATTAAGCTATtcttaaacaa
atattttttgtatttgcACAATTTCCACCTATGAAtccagtgctgcaaat
aacggccggtgaccggtaattaccggtcatttcGTAGTTTCTACCGGCCA
ATCTGAAGCTCAATctttcattttgtccggttaaaatttaAAGACTAGAG
GCTTAGATAAATACTTAATAAAGTTTCCAATTAAAAGAGGaatagatttt
gaattaatacaggtgtttagccaatctaaaCGTCATTTCAGACTTTTCTA
ATGGGGTTCTGCCAGACCCCCTGCTCAGACCCCCTGCTCAAATTATTttc
gttgcactcaaaatattaccggccaactgaaatttccttatttgcagcac
tggaATCAGTCAATGGAGGACTAATCAAGTAGGTCCAACACGTGTAGTGC
AACAATTAATCTCAGTGTAATCAATGACTGAACTGAGATTTCGGACTCAG
AAATTTTGCTCTACCGAACGAGCTATGCAGTCTACTAGCGATGTAAAAGT
CACGAGTTTGAATCTCACTCCAGCCCTCAGTCTACAAGTTCAAATAACAT
TAAATTTAGATCTTTGCGCTGTGTGAATATTTTGGCTCTTTATCTACAAA
TTCATTCAAAGTATCTCCTTAATCCAGCTCATAAAGAGCTTTTTTTCATT
ACCAAAAGGCTAAATAATTGATTGGATTGAATTGGATTGAATTCATATAT
cactttattttcttgttttatttGTGCAGGACTCTCAATTTCCATCGAGC
TTCCACGCTGTAACATATCACTGGGTAAAGAGCTGTACTTCGTTAAACTG
CCCAATTTTTTGAGTGTGGATACTAAACCATTCGATTCGAACTATTATGA
AGATATTTCATCAGATGAGGACGAAATCTTAGATGAAGAAGGAAGAGCTA
GATTGAAACTGAAGGTAAAGATAAACGAAACAACTAAATAGAGAAAAGTG
TTGAATTATCCTGGTTATAAACAACTGCTTTACAGTACAATACTCTATAT
TGAAGTAAAATACCTTCGTCATATATTTTtttcggcttcaaaaatcactg
gAATTAAGAAGATTGCTTTATGAAATTCGCTTCGTACATCTAAATGACAC
TTCGTACTCCGGCCAATTTATTTGCAAGTTACAGTCAATGAAAGTGCCTC
CAACTGATTTCAAAGCCACAATACCTATTGTAAAAGGGTGTAGGTAATTA
TCATCTTTTGTCTGAACAAACAAATTTTCAACTCTCTCCCTTTGTACTTT
TCAGGTGGAGAACACAATTCGCTGGCGTTACTCCAAAGATAAGGATGGTG
AAGAGATCAAAGAATCAAACTGTCGTTTCGTTCGTTGGTCTGATGGCTCG
CTGTCCATGCATCTTGGTAACGAAGTGTTCGATGTCTTCAAAATGAAAGT
CGACGGTGAACAAAATCACCTCTTCGTTCAACAGGTATGTGGTTGGATTT
TCATAGGAAATTGTCTAATTAGATGTAAGTTGACTGGTTCGATGTCTTCA
ACATCCAGGTTCTAATGGCTTCACCAAAAGTAAAGTTACACTTGCTATAA
AACCCTACTCCCAGTTCATGTTGTAAGCGAAAATCAATAAAAGTGAGTTT
TATACTaatagtttgagtaaagaaaacNTTTTCTTGTTTTATTTGTGCAG
GACTCTCAATTTCCATCGAGCTTCCACGCTGTAACATATCACTGGGTAAA
GAGCTGTACTTCGTTAAACTACCCAATTTCTTGAGTGTGGATACTAAACC
ATTCGATTCGAACTATTATGAAGATATTTCATCAGACGAGGACGAAATCT
TGGATGAAGAAGGAAGAGCTAGATTGAAACTGAAGGTAAATATGAACGAA
ACAACTAAATAGAGAAAAGTGTTGAATTATCCTGGTTATAAACAACTGCT
TTACAGTACAATACTCTATATTGAAGTAAAATGCCTTCGTCATATATTTT
tttcggcttcaaaaatcactggAATTAAGAAGATTGCTTTATGAAATTCG
CTTCGTACATCTAAATGACACTTCGTACTCCGGCCAATTTATTTGCAAGT
TACAGTCAATGAAAGTGCCTCCAACTGATTTCAAAGCCACAATACCTATT
GTAAAAGGGTGTAGGTAATTATCATCTTTTGTCTGAACAAACAAATTTTC
AACTCTCTCCCTTTGTACTTTTCAGGTGGAGAACACAATTCGCTGGCGTT
ACTCCAAAGATAAGGATGGTGAAGAGATCAAAGAATCAAACTGTCGTTTC
GTTCGTTGGTCTGATGGCTCGCTGTCCATGCATCTTGGTAACGAAGTGTT
CGATGTCTTCAAAATGAAAGTCGACGGTGAACAAAATCACCTCTTCGTTC
AACAGGTATGTGGTTGGATTTTCATAGGAAATTGTCTAATTAGATGTAAG
TTGACTGGTTCGATGTCTTCAACATCCAGGTTCTAATGGCTTCACCAAAA
GTAAAGTTACACTTGCTATAAAACCCTACTCCCAGTTCATGTTGTAAGCG
AAAATCAATAAAAGTGAGTTTTATACTagtagtttgagtaaagaaaacga
gtTTTCAGTCAATTTCATACTCCCATAGAATTTGCCAACTTTTTGGTTAC
AGAAACGGCTAGTTGATTGATTGACATTGAGATATCGACATAGCTACCAA
ACAATGAATAAGTTTTTAAAAGGATATTTGTACAAGCTATATCAAGGGCG
ATGCCTTTATCAAAACGACAGTTTTACGACAGTTTTTAAATTCCTGGGCA
GTTTTATTGTACGCCGTAGTTGTGCGTGTTCTTCTTAAAATGAATCGAGG
TTTAAACATTGTTTGTGAGGCGTCCTTTTAATCCTTACTTTCAAAGAACG
AAAAGCTATTACAGTTTATAGAATGGTgctgaaattttccaaagatattA
AAGACTTGGTCTTTATTTTCCAGGGAACAGGTCTTCAAGCACAAGCTGTC
TTCAAGAACAAACTCTCCTTCCGTCCTCATTCCACTACCTCTCAAACACA
TCGAAAGATGACGCAATCTATTGCAGACCGTATGAACAAAGCACAGAAAG
TCAAGATGATGCCTGCTATGGAAAAAGATCCTGAATCACAACGAGAATCT
GCTTTGAAGGTAAAACCTATTCATAATATTTGCATCTTGTGGGCCCACTC
CCTTTCTAAAGGAAGCGCTCTAACCTTTCCAAAAATCTATAATTATTGTA
GTAAAGAGTAAAAGAGGGTTAAGTAATAGGGGAGGGGTAGATTTTCAAAG
GAAGGGATAggatttttagtatattttgtGATAATGTGCCATAAAGCTTG
tttttttaaaggctttttattTTTAGCAGTAAATTTTTGTAAGACTTTTA
AGTTAATAAGTATGTGAAAAtattagaataaaaaatattgtcTTGAAAGA
TTGACTTGAAATGGGAGAAAAGGAAGATAAGCTAATTTTTAAAGGGCCCC
TagatttcttgatattttcaatctctgttttttttttcaatgtagaAAGA
AGACGAAAGATTACGAGCAGCTAACCGTCGTGAAAGTCAACAACGACGCA
TGCGCGAGAAGAGCCATTTGAAAGGGTTATCGTCAGGTTATTTGAATGAC
AATGATGATGACGACGGTTATGAGAACAGCATCGCTGCCATCAAAGCTGA
TTATAAAAGTAAGTATGATTAAGAAATATTAGGAATATACCTAAAAATAC
CTAGGTTTACTTTAAGGGAGCTAATTATTTCGCCGGAACTTTTTCGCTTT
TTCGCGGTTTCTTTCCAAGAATTTAATTGATAATTTTCATGAAACATTAA
AATTATCTTACGTAAATTTCCCTCTTCGCAAATACAAGAAATGTGCTTTA
TctaattttctttggaaaatacaaTAAGCATAATGAGTATTCCGCGCTTA
AAAATAAACATAACGTTCGTGAATACTTTCTCCAAGATGAAAAACGTTAA
CGTTAACAAAAGAAGGTCTTTCTGTAATCTAGTATTTAGTCTGTACTTTC
AgtaatttttaccatttttacaGAAGGGGTTCTTACCATAATGTATTTAA
AACCAGCTCAAACGTTACTATTTTTCTTTCTTGCAGATAAGAAACGTCGA
CCATTAGACATTTACGATGACGACGAAGACGAAGAAAGTGAGGACAGTGC
AAAAGAAGATCGCCTTCGTAAAGCCAAACAACTGAACGATGACGATGAGG
ATGACGACGGCGACGAATTTGATGCCGACACACGTCGTAAGAGAGACGAA
CTTGCTACGCGCAAAAAGAAAGCTGGTCGGAAGATTATTGAATCAGATGA
AGATTCGGATGCTGAGAGTGATTAAGGGTGATTATCGATGAATGATGGAG
CTCGTCCTACTTTTCTAGGGTGCTATCTATGATGTGCCTAATGTATATAG
CGGTCAGATTTTGTGTTATGACAGGTTTACCTtgagggctctgaccatag
tcggaaaattaattttagtatctgaacataaaagttatgttttagattct
ttaacacttttgacaaagaattgcctttataaattgctttttaatcaaac
cccttaagagtaattttaagaatttaattgcaaaaatgacattatcaact
ttaaaaagacgttaataatatgttgcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006597XLOC_006597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011740-exon-sc0000132-1491911889:491320..491351TCONS_00011740-exon-sc0000132-1491911889:491320..491351Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:491320..491351TCONS_00011740-exon-sc0000132-1510915933:491320..491351Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:491320..491351TCONS_00011740-exon-sc0000132-1575043694:491320..491351Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:492492..492902TCONS_00011740-exon-sc0000132-1491911889:492492..492902Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:492492..492902TCONS_00011740-exon-sc0000132-1510915933:492492..492902Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:492492..492902TCONS_00011740-exon-sc0000132-1575043694:492492..492902Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:493303..493355TCONS_00011740-exon-sc0000132-1491911889:493303..493355Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:493303..493355TCONS_00011740-exon-sc0000132-1510915933:493303..493355Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:493303..493355TCONS_00011740-exon-sc0000132-1575043694:493303..493355Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:494257..494454TCONS_00011740-exon-sc0000132-1491911889:494257..494454Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:494257..494454TCONS_00011740-exon-sc0000132-1510915933:494257..494454Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:494257..494454TCONS_00011740-exon-sc0000132-1575043694:494257..494454Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:494763..494886TCONS_00011740-exon-sc0000132-1491911889:494763..494886Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:494763..494886TCONS_00011740-exon-sc0000132-1510915933:494763..494886Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:494763..494886TCONS_00011740-exon-sc0000132-1575043694:494763..494886Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:496820..497004TCONS_00011740-exon-sc0000132-1491911889:496820..497004Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:496820..497004TCONS_00011740-exon-sc0000132-1510915933:496820..497004Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:496820..497004TCONS_00011740-exon-sc0000132-1575043694:496820..497004Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:497345..497524TCONS_00011740-exon-sc0000132-1491911889:497345..497524Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:497345..497524TCONS_00011740-exon-sc0000132-1510915933:497345..497524Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:497345..497524TCONS_00011740-exon-sc0000132-1575043694:497345..497524Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:498093..498278TCONS_00011740-exon-sc0000132-1491911889:498093..498278Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:498093..498278TCONS_00011740-exon-sc0000132-1510915933:498093..498278Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:498093..498278TCONS_00011740-exon-sc0000132-1575043694:498093..498278Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:498665..498827TCONS_00011740-exon-sc0000132-1491911889:498665..498827Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:498665..498827TCONS_00011740-exon-sc0000132-1510915933:498665..498827Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:498665..498827TCONS_00011740-exon-sc0000132-1575043694:498665..498827Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1491911889:499256..499797TCONS_00011740-exon-sc0000132-1491911889:499256..499797Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1510915933:499256..499797TCONS_00011740-exon-sc0000132-1510915933:499256..499797Clytia hemisphaericaexon
TCONS_00011740-exon-sc0000132-1575043694:499256..499797TCONS_00011740-exon-sc0000132-1575043694:499256..499797Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:491320..499797 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.890416	1.3131	1.70861	3.23991	4.45285	4.60276	2.98774	4.00189	1.20273	0.468382	3.36532	3.24953	1.70233	1.52531	0.93484	1.14213	3.3364	3.05368	0.181003	2.93158	2.03339	1.04126	0.60629	0.647241	3.08641	1.60082	0.0663772	0.285061	0.781556	1.01882
Blast
[Close]
BLAST of TCONS_00011740 vs. Swiss-Prot (Human)
Match: LEO1 (RNA polymerase-associated protein LEO1 OS=Homo sapiens GN=LEO1 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 8.263e-85
Identity = 176/337 (52.23%), Postives = 223/337 (66.17%), Query Frame = 2 
Query:  641 TQDLFG--EDVSSDEETQDKPSTSFRP-DISPLSGDEDSMRFSERRIPSPSXXXXXXXXXXXGLSISIELPRCNISLGKELYFVKLPNFLSVDTKPFXXXXXXXXXXXXXXXXXXXGRARLKLKVENTIRWRYSKDKDGEEIKESNCRFVRWSDGSLSMHLGNEVFDVFKMKVDGEQNHLFVQQGTGLQAQAVFKNKLSFRPHSTTSQTHRKMTQSIADRMNKAQKVKMMPAMEKDPESQRESALKKEDERLRAANRRESQQRRMREKSHLKGXXXXXXXXXXXXXXXEN----SIAAIKADYKNKKRRPLDIYXXXXXXXXXXXXXXXRLRKAKQL 1630
            T DLFG  +D+SS  + +DKP T  +P D + L  D+      E  IP                 I +E+P+ N  LG +LYFVKLPNFLSV+ +PFD  YYED   DE+ + +E GR RLKLKVENTIRWR  +D++G EIKESN R V+WSDGS+S+HLGNEVFDV+K  + G+ NHLF++QGTGLQ QAVFK KL+FRPHST S THRKMT S+ADR +K QK++++P   +DPE QR   +KKE+ERLRA+ RRESQQRRMREK H +GLS+ YL  +  D+  E     S+AAIK  YK   R         + +E  +  K  RL KAK+L
Sbjct:  311 TMDLFGGADDISSGSDGEDKPPTPGQPVDENGLPQDQ----QEEEPIPE--------------TRIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEE-GRTRLKLKVENTIRWRIRRDEEGNEIKESNARIVKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQGTGLQGQAVFKTKLTFRPHSTDSATHRKMTLSLADRCSKTQKIRILPMAGRDPECQRTEMIKKEEERLRASIRRESQQRRMREKQHQRGLSASYLEPDRYDEEEEGEESISLAAIKNRYKGGIREERARIYSSDSDEGSEEDKAQRLLKAKKL 628
The following BLAST results are available for this feature:
BLAST of TCONS_00011740 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LEO18.263e-8552.23RNA polymerase-associated protein LEO1 OS=Homo sap... [more]
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