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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011695 ID=TCONS_00011695|Name=TCONS_00011695|organism=Clytia hemisphaerica|type=transcript|length=1056bp
CGTCGAGAGATACTAGGTGTGAAAGACATACTAGATACACCTATCAATGA
CATTATCGCACTTGTTGAAAGCAAGGAGATGGCGCGCGATGCGCTTCCCC
TGTCAGTTGGGAGNAAGAGACTTTTCTTCCATTAAACCGTTGTCATCGAT
CGATCAAGTTGGTCACACCACGAGCACCGTTGATATCGATTCCATCAAGG
AAAAGAGTTGCTCCTGTNGCGCGATGCGCTTCCCCTGTCAGTTGGGAGTG
TATCATCCTCTTCCTATCGTCGCAACAGGTCGAAACAAGTCGAAACATCT
CAGACCGACATTCCTGTTCCTTGCCCTGGATGCCAGAAGCCATTCCTGCG
TTTCAGTGAAGGTCGAAATGGTCGCAATAAGGTACCTCACAAGCTCTGCA
TCGAATGTTACCGTATCCAACGTCGCCAAGATAAAACCAATTCCAATCCG
CCGACCAAGCCAGACGCATCAAATANTTCGCACACCCGTTCCAGAAATGC
CCAAAGAGTTACCGTTCGATTGCGTGCCTGAGAACAATGACAAGATGAAA
AAGTGGATTCTAGAACATTTTGCTTCTTTCACTTTTAACACCTGCCCTCA
TCAGACCCTCGAGAAAATAGAGGGGCCACCTGTTGAAATCCACTTGAAGG
AGAACGCAATTCCCAAAGCCGTTCACACTCCTGCAAGCATCCCAATCCAT
TGGCAAGACCAAGTGCACAAGGACCTTTTGAGAGACGAAGCACTTGGCGT
TATTGAAAAAGTGCCATATGGTAAACCAGTGTCATGGCGCCACCGCATGG
TCGTCACACTAAAACATGACGGCTCCCCCAGGAGGACTGTTGATTTATCT
CCTCTGAACAAACATTGCCAACGAGAAACTTTCCCCACTGCATCTCCATT
CCAGGCTGCTAGACGTGTACCACCCAACACCTGGAAGACCGTAAACGACG
CATGGAACGGCTTCCATAGCGTCCCTCTTCGCGAGTCAGACAAGCATCTA
ACCACGTTCATTACACCCTACGGTCGTTGGAGGTATCGTGCTACACCCCA
AGGGTT Run BLAST on NCBI protein sequence of TCONS_00011695-protein >TCONS_00011695-protein ID=TCONS_00011695-protein|Name=TCONS_00011695-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MTLSHLLKARRWRAMRFPCQLGXRDFSSIKPLSSIDQVGHTTSTVDIDSI
KEKSCSCXAMRFPCQLGVYHPLPIVATGRNKSKHLRPTFLFLALDARSHS
CVSVKVEMVAIRYLTSSASNVTVSNVAKIKPIPIRRPSQTHQIXRTPVPE
MPKELPFDCVPENNDKMKKWILEHFASFTFNTCPHQTLEKIEGPPVEIHL
KENAIPKAVHTPASIPIHWQDQVHKDLLRDEALGVIEKVPYGKPVSWRHR
MVVTLKHDGSPRRTVDLSPLNKHCQRETFPTASPFQAARRVPPNTWKTVN
DAWNGFHSVPLRESDKHLTTFITPYGRWRYRATPQG Run BLAST on NCBI transcript from alignment at sc0000131:97750..98805 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011695 ID=TCONS_00011695|Name=TCONS_00011695|organism=Clytia hemisphaerica|type=transcript|length=1056bp|location=Sequence derived from alignment at sc0000131:97750..98805 (Clytia hemisphaerica)
AACCCTTGGGGTGTAGCACGATACCTCCAACGACCGTAGGGTGTAATGAA
CGTGGTTAGATGCTTGTCTGACTCGCGAAGAGGGACGCTATGGAAGCCGT
TCCATGCGTCGTTTACGGTCTTCCAGGTGTTGGGTGGTACACGTCTAGCA
GCCTGGAATGGAGATGCAGTGGGGAAAGTTTCTCGTTGGCAATGTTTGTT
CAGAGGAGATAAATCAACAGTCCTCCTGGGGGAGCCGTCATGTTTTAGTG
TGACGACCATGCGGTGGCGCCATGACACTGGTTTACCATATGGCACTTTT
TCAATAACGCCAAGTGCTTCGTCTCTCAAAAGGTCCTTGTGCACTTGGTC
TTGCCAATGGATTGGGATGCTTGCAGGAGTGTGAACGGCTTTGGGAATTG
CGTTCTCCTTCAAGTGGATTTCAACAGGTGGCCCCTCTATTTTCTCGAGG
GTCTGATGAGGGCAGGTGTTAAAAGTGAAAGAAGCAAAATGTTCTAGAAT
CCACTTTTTCATCTTGTCATTGTTCTCAGGCACGCAATCGAACGGTAACT
CTTTGGGCATTTCTGGAACGGGTGTGCGAANTATTTGATGCGTCTGGCTT
GGTCGGCGGATTGGAATTGGTTTTATCTTGGCGACGTTGGATACGGTAAC
ATTCGATGCAGAGCTTGTGAGGTACCTTATTGCGACCATTTCGACCTTCA
CTGAAACGCAGGAATGGCTTCTGGCATCCAGGGCAAGGAACAGGAATGTC
GGTCTGAGATGTTTCGACTTGTTTCGACCTGTTGCGACGATAGGAAGAGG
ATGATACACTCCCAACTGACAGGGGAAGCGCATCGCGCNACAGGAGCAAC
TCTTTTCCTTGATGGAATCGATATCAACGGTGCTCGTGGTGTGACCAACT
TGATCGATCGATGACAACGGTTTAATGGAAGAAAAGTCTCTTNCTCCCAA
CTGACAGGGGAAGCGCATCGCGCGCCATCTCCTTGCTTTCAACAAGTGCG
ATAATGTCATTGATAGGTGTATCTAGTATGTCTTTCACACCTAGTATCTC
TCGACG Coding sequence (CDS) from alignment at sc0000131:97750..98805 >TCONS_00011695 ID=TCONS_00011695|Name=TCONS_00011695|organism=Clytia hemisphaerica|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000131:97750..98805 (Clytia hemisphaerica)
CCCTTGGGGTGTAGCACGATACCTCCAACGACCGTAGGGTGTAATGAACG
TGGTTAGATGCTTGTCTGACTCGCGAAGAGGGACGCTATGGAAGCCGTTC
CATGCGTCGTTTACGGTCTTCCAGGTGTTGGGTGGTACACGTCTAGCAGC
CTGGAATGGAGATGCAGTGGGGAAAGTTTCTCGTTGGCAATGTTTGTTCA
GAGGAGATAAATCAACAGTCCTCCTGGGGGAGCCGTCATGTTTTAGTGTG
ACGACCATGCGGTGGCGCCATGACACTGGTTTACCATATGGCACTTTTTC
AATAACGCCAAGTGCTTCGTCTCTCAAAAGGTCCTTGTGCACTTGGTCTT
GCCAATGGATTGGGATGCTTGCAGGAGTGTGAACGGCTTTGGGAATTGCG
TTCTCCTTCAAGTGGATTTCAACAGGTGGCCCCTCTATTTTCTCGAGGGT
CTGATGAGGGCAGGTGTTAAAAGTGAAAGAAGCAAAATGTTCTAGAATCC
ACTTTTTCATCTTGTCATTGTTCTCAGGCACGCAATCGAACGGTAACTCT
TTGGGCATTTCTGGAACGGGTGTGCGAANTATTTGATGCGTCTGGCTTGG
TCGGCGGATTGGAATTGGTTTTATCTTGGCGACGTTGGATACGGTAACAT
TCGATGCAGAGCTTGTGAGGTACCTTATTGCGACCATTTCGACCTTCACT
GAAACGCAGGAATGGCTTCTGGCATCCAGGGCAAGGAACAGGAATGTCGG
TCTGAGATGTTTCGACTTGTTTCGACCTGTTGCGACGATAGGAAGAGGAT
GATACACTCCCAACTGACAGGGGAAGCGCATCGCGCNACAGGAGCAACTC
TTTTCCTTGATGGAATCGATATCAACGGTGCTCGTGGTGTGACCAACTTG
ATCGATCGATGACAACGGTTTAATGGAAGAAAAGTCTCTTNCTCCCAACT
GACAGGGGAAGCGCATCGCGCGCCATCTCCTTGCTTTCAACAAGTGCGAT
AATGTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011695-exon-sc0000131-1491911889:97750..98805 | TCONS_00011695-exon-sc0000131-1491911889:97750..98805 | Clytia hemisphaerica | exon |
| TCONS_00011695-exon-sc0000131-1510915933:97750..98805 | TCONS_00011695-exon-sc0000131-1510915933:97750..98805 | Clytia hemisphaerica | exon |
| TCONS_00011695-exon-sc0000131-1575043694:97750..98805 | TCONS_00011695-exon-sc0000131-1575043694:97750..98805 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131 | supercontig | sc0000131:97750..98805 . |
Blast
The following BLAST results are available for this feature:
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