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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011693 ID=TCONS_00011693|Name=TCONS_00011693|organism=Clytia hemisphaerica|type=transcript|length=1104bp
CGAGATTACGAACGATAGAATTTTTCGACTGAAACAGCGAACACTGCCAT
GGTCCTTCAAGATTTATCATCTACCAGGGAAAACGAACCTTGCATCCGAC
GCCACGTCACGCTATCCATCGGCTGTCATTGGATTATTGACTTTTGCTGA
CCAGGTAGAAGATGCCATTAATGCGGCCATTCGTGCTGATACCAACGCCA
CCTTCAACATGAGCTGGGACCAGATCATTGTTGAGACAGCTAAAGATCCA
TCGCTTTCCCTCCTCCTGAAGCAGTCTGGCTTCGACGAAATCCAACCTGA
CGAAATTGCCACAATATCCCAGTACTGGCGATATCGCGAGTCTCTCTACA
TATTGGATGATGTATTGCTTTATCAAGATCGGGTTGTTGTTCAACCATCT
CTTCGCGAAACCGTCCTTTCGATACTTCACTCAGCACACCAAGGAGTATC
TGCCATGTCATCCAGAGCTCAATCCACTGTCTTCTGGCCCGGTATGTCAA
GAGATATCAGTGCAACACGTGCCAACTGTACCCAATGCAACCGAAATGCT
CCATCCCAAGCGGCCATGCCTGCAGCCCCACCATCGACACCGTCCACTCC
ATTCGAGATGATAATCGCTGACTTCTTCTCTTATGCTGGTTCCCACTATT
TACTCGCCGGAGATCGACTATCTGGATGGGTTGAAGTTTATCGTTCGCTA
AATCTGGTGCCAAGGGACTCATCACTGCGTTACGCTCTCTTTTCGCCACA
TTCGGTGTACCTGAGGAGCTATCGAGTGATGGCGGCCCAGAATTCTCCGC
ACATGAAACTGAATTGTTCTTGAAGAAATGGGGAGTGAGTCACCGTATTT
CATCAGCTTACTTTCCCCAGTCCAACGGTCGCGCAGAGGTAGCGGTTAAG
AAATGCAAACGTCTTCTCATGGAGAATATCGACCCGAACGGTTCTCTTGA
CAACGATCGTTTCCTACGTGCTCTCCTTCAGATGAGGAACACACCCGACA
CTGACTGCAAGATCAGCCCCGCCGAAATCATCTTTGATAAGCCGTTACGT
GACGCTTTCTCCTTCGTAAATCGTCTCCCGATGTACACCAACCCCTCCAT
CCGN Run BLAST on NCBI protein sequence of TCONS_00011693-protein >TCONS_00011693-protein ID=TCONS_00011693-protein|Name=TCONS_00011693-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
EITNDRIFRLKQRTLPWSFKIYHLPGKTNLASDATSRYPSAVIGLLTFAD
QVEDAINAAIRADTNATFNMSWDQIIVETAKDPSLSLLLKQSGFDEIQPD
EIATISQYWRYRESLYILDDVLLYQDRVVVQPSLRETVLSILHSAHQGVS
AMSSRAQSTVFWPGMSRDISATRANCTQCNRNAPSQAAMPAAPPSTPSTP
FEMIIADFFSYAGSHYLLAGDRLSGWVEVYRSLNLVPRDSSLRYALFSPH
SVYLRSYRVMAAQNSPHMKLNCS Run BLAST on NCBI transcript from alignment at sc0000131:93610..94713 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011693 ID=TCONS_00011693|Name=TCONS_00011693|organism=Clytia hemisphaerica|type=transcript|length=1104bp|location=Sequence derived from alignment at sc0000131:93610..94713 (Clytia hemisphaerica)
NCGGATGGAGGGGTTGGTGTACATCGGGAGACGATTTACGAAGGAGAAAG
CGTCACGTAACGGCTTATCAAAGATGATTTCGGCGGGGCTGATCTTGCAG
TCAGTGTCGGGTGTGTTCCTCATCTGAAGGAGAGCACGTAGGAAACGATC
GTTGTCAAGAGAACCGTTCGGGTCGATATTCTCCATGAGAAGACGTTTGC
ATTTCTTAACCGCTACCTCTGCGCGACCGTTGGACTGGGGAAAGTAAGCT
GATGAAATACGGTGACTCACTCCCCATTTCTTCAAGAACAATTCAGTTTC
ATGTGCGGAGAATTCTGGGCCGCCATCACTCGATAGCTCCTCAGGTACAC
CGAATGTGGCGAAAAGAGAGCGTAACGCAGTGATGAGTCCCTTGGCACCA
GATTTAGCGAACGATAAACTTCAACCCATCCAGATAGTCGATCTCCGGCG
AGTAAATAGTGGGAACCAGCATAAGAGAAGAAGTCAGCGATTATCATCTC
GAATGGAGTGGACGGTGTCGATGGTGGGGCTGCAGGCATGGCCGCTTGGG
ATGGAGCATTTCGGTTGCATTGGGTACAGTTGGCACGTGTTGCACTGATA
TCTCTTGACATACCGGGCCAGAAGACAGTGGATTGAGCTCTGGATGACAT
GGCAGATACTCCTTGGTGTGCTGAGTGAAGTATCGAAAGGACGGTTTCGC
GAAGAGATGGTTGAACAACAACCCGATCTTGATAAAGCAATACATCATCC
AATATGTAGAGAGACTCGCGATATCGCCAGTACTGGGATATTGTGGCAAT
TTCGTCAGGTTGGATTTCGTCGAAGCCAGACTGCTTCAGGAGGAGGGAAA
GCGATGGATCTTTAGCTGTCTCAACAATGATCTGGTCCCAGCTCATGTTG
AAGGTGGCGTTGGTATCAGCACGAATGGCCGCATTAATGGCATCTTCTAC
CTGGTCAGCAAAAGTCAATAATCCAATGACAGCCGATGGATAGCGTGACG
TGGCGTCGGATGCAAGGTTCGTTTTCCCTGGTAGATGATAAATCTTGAAG
GACCATGGCAGTGTTCGCTGTTTCAGTCGAAAAATTCTATCGTTCGTAAT
CTCG Coding sequence (CDS) from alignment at sc0000131:93610..94713 >TCONS_00011693 ID=TCONS_00011693|Name=TCONS_00011693|organism=Clytia hemisphaerica|type=CDS|length=822bp|location=Sequence derived from alignment at sc0000131:93610..94713 (Clytia hemisphaerica)
TCAAGAACAATTCAGTTTCATGTGCGGAGAATTCTGGGCCGCCATCACTC
GATAGCTCCTCAGGTACACCGAATGTGGCGAAAAGAGAGCGTAACGCAGT
GATGAGTCCCTTGGCACCAGATTTAGCGAACGATAAACTTCAACCCATCC
AGATAGTCGATCTCCGGCGAGTAAATAGTGGGAACCAGCATAAGAGAAGA
AGTCAGCGATTATCATCTCGAATGGAGTGGACGGTGTCGATGGTGGGGCT
GCAGGCATGGCCGCTTGGGATGGAGCATTTCGGTTGCATTGGGTACAGTT
GGCACGTGTTGCACTGATATCTCTTGACATACCGGGCCAGAAGACAGTGG
ATTGAGCTCTGGATGACATGGCAGATACTCCTTGGTGTGCTGAGTGAAGT
ATCGAAAGGACGGTTTCGCGAAGAGATGGTTGAACAACAACCCGATCTTG
ATAAAGCAATACATCATCCAATATGTAGAGAGACTCGCGATATCGCCAGT
ACTGGGATATTGTGGCAATTTCGTCAGGTTGGATTTCGTCGAAGCCAGAC
TGCTTCAGGAGGAGGGAAAGCGATGGATCTTTAGCTGTCTCAACAATGAT
CTGGTCCCAGCTCATGTTGAAGGTGGCGTTGGTATCAGCACGAATGGCCG
CATTAATGGCATCTTCTACCTGGTCAGCAAAAGTCAATAATCCAATGACA
GCCGATGGATAGCGTGACGTGGCGTCGGATGCAAGGTTCGTTTTCCCTGG
TAGATGATAAATCTTGAAGGACCATGGCAGTGTTCGCTGTTTCAGTCGAA
AAATTCTATCGTTCGTAATCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011693-exon-sc0000131-1491911889:93610..94713 | TCONS_00011693-exon-sc0000131-1491911889:93610..94713 | Clytia hemisphaerica | exon |
| TCONS_00011693-exon-sc0000131-1510915933:93610..94713 | TCONS_00011693-exon-sc0000131-1510915933:93610..94713 | Clytia hemisphaerica | exon |
| TCONS_00011693-exon-sc0000131-1575043694:93610..94713 | TCONS_00011693-exon-sc0000131-1575043694:93610..94713 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131 | supercontig | sc0000131:93610..94713 . |
Blast
The following BLAST results are available for this feature:
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