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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011651 ID=TCONS_00011651|Name=TCONS_00011651|organism=Clytia hemisphaerica|type=transcript|length=862bp
aaaaaaacgaatattCATGCATATGACATATCACAGGGAAATTGGCAATG
GTGACATAATCTTATAAATCATAAAAGTAcagagaatattttttttaaag
atattaaaCATTGAGGAACCAAACATTGATCGCCAGATAAATTTAGTttg
taaaattcaaaatggctgagGGGACATCAGCATTTGAAGGATGTGCTGTA
ATATTTCATAATGTTGTCNTCACACCCGTATTGATGATGAAGGTTTAATC
ACTCTAAATGCACCACGATTGAGTATTTTGACGCTGGACGGGACTGATGT
TACTATGCAAGCTGTCAACAGACTTTTGCTGAaaTGCACCTCATTGTCAT
GGGTTCGTAATGCATCCAAGAATGTTTTGTATGAAAGGGAAAGCATGGAC
GAAACATGAGAACGTAAAAAAGTACACTCCCTGTGGCATTGTCTATATTT
CCTACTTTAACACGAGTAGACAACTTTTATGAGAAACTTTCGTggccaaa
acaaaaataatactGACTGATGCAAAGCTTTTTCTTGCCAGCTGCCTTGA
AATCTTTTGAAGTCCATGATCATATTCTGAGAGAATTATTACTTTCTGCT
CCATTTTCTATTGCGACAATTTCAAGTCATTTCGAGCCTTCATTCCCTAA
GGCTCACCGTCTGGCCCTGGTCTAtggatgtttgtttttctcagtttata
aattttttaattaaaaatttcaattttttttaagaagagAAAAGTTTTAA
TATTGCTAGtttatttaattaaaaaaacaactatattatttttaaaggaa
aactttttcaaatactcatttaaaataatgaaattttgctctCACATTTT
TTGCTCctgata Run BLAST on NCBI transcript from alignment at sc0000131:221873..223241+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011651 ID=TCONS_00011651|Name=TCONS_00011651|organism=Clytia hemisphaerica|type=transcript|length=1369bp|location=Sequence derived from alignment at sc0000131:221873..223241+ (Clytia hemisphaerica)
aaaaaaacgaatattCATGCATATGACATATCACAGGGAAATTGGCAATG
GTGACATAATCTTATAAATCATAAAAGTAcagagaatattttttttaaag
atattaaaCATTGAGGAACCAAACATTGATCGCCAGATAAATTTAGTttg
taaaattcaaaatggctgagGGGACATCAGCATTTGAAGGATGTGCTGTA
ATATTTCATAATGTTGTCNTCACACCCGTATTGATGATGAAGGTTTAATC
ACTCTAAATGCACCACGATTGAGTATTTTGACGCTGGACGGGACTGATGT
TACTATGCAAGCTGTCAACAGACTTTTGCTGAGTAAGTTGTTTATGTTTT
CCCCTCACTCAGGCAGAATGTGATAAGAGGATTAATCATCAAGAGCAATT
ATGCATCGGTAAGCATAATAGCAGTCGACGAACATAATAATAGAGCATAA
GCAATTATTtgggtttgaatttttttaagatcAGATGACAGAACTCAGAA
ATATTTCTGATTACTAGAACGCCTAGTTCAAAGTTCACTCAAATCACAAC
TTTAAACTAAATCAGATGAAATGCTACACCACTTCCACGCACAATGCAGC
TTCTTGTTTCGCATTACTTGATAGAGAAAACGTGATTTTAAGAATCTAAT
TTTAATAAACATTACTTCACCTTTCATTAACATTACGAGATGCTTTGTCA
GCAAATTTTTCTCTTGATATAATCATTGCGCAATTTATTTTGTGCCTTGT
GCTGCTGTGTATTTTTGTCATGGTTAACAATTTAATTAGTGCAACTCCCT
GTGACGGTTTCtctaaaaattgtttattttgttttttagaaTGCACCTCA
TTGTCATGGGTTCGTAATGCATCCAAGAATGTTTTGTATGAAAGGGAAAG
CATGGACGAAACATGAGAACGTAAAAAAGTACACTCCCTGTGGCATTGTC
TATATTTCCTACTTTAACACGAGTAGACAACTTTTATGAGAAACTTTCGT
ggccaaaacaaaaataatactGACTGATGCAAAGCTTTTTCTTGCCAGCT
GCCTTGAAATCTTTTGAAGTCCATGATCATATTCTGAGAGAATTATTACT
TTCTGCTCCATTTTCTATTGCGACAATTTCAAGTCATTTCGAGCCTTCAT
TCCCTAAGGCTCACCGTCTGGCCCTGGTCTAtggatgtttgtttttctca
gtttataaattttttaattaaaaatttcaattttttttaagaagagAAAA
GTTTTAATATTGCTAGtttatttaattaaaaaaacaactatattattttt
aaaggaaaactttttcaaatactcatttaaaataatgaaattttgctctC
ACATTTTTTGCTCctgata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011651-exon-sc0000131-1491911889:221873..222204 | TCONS_00011651-exon-sc0000131-1491911889:221873..222204 | Clytia hemisphaerica | exon |
| TCONS_00011651-exon-sc0000131-1510915933:221873..222204 | TCONS_00011651-exon-sc0000131-1510915933:221873..222204 | Clytia hemisphaerica | exon |
| TCONS_00011651-exon-sc0000131-1575043694:221873..222204 | TCONS_00011651-exon-sc0000131-1575043694:221873..222204 | Clytia hemisphaerica | exon |
| TCONS_00011651-exon-sc0000131-1491911889:222712..223241 | TCONS_00011651-exon-sc0000131-1491911889:222712..223241 | Clytia hemisphaerica | exon |
| TCONS_00011651-exon-sc0000131-1510915933:222712..223241 | TCONS_00011651-exon-sc0000131-1510915933:222712..223241 | Clytia hemisphaerica | exon |
| TCONS_00011651-exon-sc0000131-1575043694:222712..223241 | TCONS_00011651-exon-sc0000131-1575043694:222712..223241 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131 | supercontig | sc0000131:221873..223241 + |
Blast
The following BLAST results are available for this feature:
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