|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011644 ID=TCONS_00011644|Name=TCONS_00011644|organism=Clytia hemisphaerica|type=transcript|length=183bp
ATAAAAACTCAGCATGGAGACTCTAACGTTATTACTAATTGTATTAGTAT
CAATTTCTCAAGGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAG
GTCAACACATTACCAAGTTACGATGGACCAATGCCCGAAGAAGATGCACA
ATATGATGAAGAAATGTACCATGACAGTTTAAG Run BLAST on NCBI transcript from alignment at sc0000131:144839..145804+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011644 ID=TCONS_00011644|Name=TCONS_00011644|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at sc0000131:144839..145804+ (Clytia hemisphaerica)
ATAAAAACTCAGCATGGAGACTCTAACGTTATTACTAATTGTATTAGTAT
CAATTTCTCAAGGTAAGAAATTATAATAACTTTAGAATGAAGTTTAAATC
AAAAGATCACCGAAAAGACATTactttttgtgtcttttgtACTTGTTTTC
CGTCCcactaggcttctgctcatcctctagcgaaaagagtttcttatagc
AAGTATATCTGTACCCCCATAGGTTCCAAGTACTAGAAGTTTAGATGGCT
CACATACATGGTGTATAATCTAGGTCAAATTGGCTTTATTTTGATTGTAT
GCAAGATCAGATATATTAggtctttgaaaaataaacgcGAAAATCGAAGC
GTAACTTTCAAAgttttatattgattttcaaAGGTAAACATGTCAAACGT
TCACACCAAGATCACAAAAAGGTCAACACATTACCAAGTAAGtaaaactt
gacttcactgggGAGGGGGGGGGCTCTTCAAATTAGGATATAAACCATTG
GAACATGACTGTGAGACGGCTCGAACAGTACGGCACGATACCCTATATTT
AATGACCCtatatttttaagaacatccttATATATAGGGAAGTCGTCCTT
ACATTAACGAGAAACAGAGTATTCTTCATCAATACTTGAGTTTCATGCTC
TTTACAATCATCAGCTTAGGGAATTCCTTATATTTAAGGACCTTTTTTCC
TACTGATCTTCATTTAATCTACTGGGTCGAGGAAATAAAAACGATCTAGT
GAGCAGAAGTCCCTATAAATAGGGAGGTCCTTAAATGTAGGGTATCGTGC
GGTAGGTTATGATGGACCAATGTCATACAACTCTTGTCTTGTACTTTATT
GCTAAGAAGGTCAAAGTTTAACGAACAAATACATTCTTATTCAATCAAGG
TTACGATGGACCAATGCCCGAAGAAGATGCACAATATGATGAAGAAATGT
ACCATGACAGTTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011644-exon-sc0000131-1491911889:144839..144900 | TCONS_00011644-exon-sc0000131-1491911889:144839..144900 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1510915933:144839..144900 | TCONS_00011644-exon-sc0000131-1510915933:144839..144900 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1575043694:144839..144900 | TCONS_00011644-exon-sc0000131-1575043694:144839..144900 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1491911889:145222..145275 | TCONS_00011644-exon-sc0000131-1491911889:145222..145275 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1510915933:145222..145275 | TCONS_00011644-exon-sc0000131-1510915933:145222..145275 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1575043694:145222..145275 | TCONS_00011644-exon-sc0000131-1575043694:145222..145275 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1491911889:145738..145804 | TCONS_00011644-exon-sc0000131-1491911889:145738..145804 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1510915933:145738..145804 | TCONS_00011644-exon-sc0000131-1510915933:145738..145804 | Clytia hemisphaerica | exon |
| TCONS_00011644-exon-sc0000131-1575043694:145738..145804 | TCONS_00011644-exon-sc0000131-1575043694:145738..145804 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131 | supercontig | sc0000131:144839..145804 + |
Blast
The following BLAST results are available for this feature:
|
