TCONS_00011643 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011643
Unique NameTCONS_00011643
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1745

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011643 ID=TCONS_00011643|Name=TCONS_00011643|organism=Clytia hemisphaerica|type=transcript|length=1745bp
GTGGTATGTCTTCATCTGGTTCTATAGAACGTGTCAAGAAAGAGAGTATA
AAAGGAAGTGGTACAGAGGAAGTAGAGTGTCTTTCTAAGCTGAGTTTTTA
GTAAAGAGGAGAAGGGAAGAAGTCAAGATGAAGCTTTTTCTTATCTTAGT
CATTGCAATTGCTACAGTCACTCAAGGTAAACATGTCAAACGTTCACACC
AAGATCACAAAAAGGTCAACACATTACCAAGTTATGATGGACCAATGCCC
GAAGAAGATGCACAATATGTTGAAGAAATGTACCATGATGAATTGAGCTG
CAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGTGAAA
GTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACATGCGGTGATTGC
TCACCAGACCCAGCTCCTGCTTATGTGACAGCTCAACCGAAAATTTCAAG
CTCAGAGATGGAAAGCATCAAAGCAACTTGCTTGGCAGCTCACAATGCGA
AACGAGGACTCCACAAAAACACACCCTCAATGACTTATGACATGGAGCTT
GCAAAACGAGCTCAAACCTACGCAGAATATCTCCTGGAATTCGACGAGTG
GAAACACGATGCCTTTCGAAAATACAATGGCTACGAATCTGGAGTCGGTG
AAAATCTTTACTGGTCATCTTCAGCAAGTCGAACCTCTACTAATGCTGTT
GTCTCATGGTATAACGAAATCAACAACTACAATTTTACAACTGGCAAGTC
AAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTTCAA
CTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTATGTCGTT
TCCAGATATTTGTCATCTGGTAACACCAATATACACAACATGTTCATGGg
ttgaaatctaaaaaagatgaaaaagaagacCCCCCTGCTATCGAAGAAGT
CTTGTAAAAAAACCTTCTTTTTAAAATAACAAGAAATAATCCTGTTCGCT
TTTCTCTGGATgtaattcttaaatttttgcaagggtttatattttacatt
tttctttgttACATAAAGTCCATAACGTATTTAATATCTAAATTAATCTA
TATTTGTCACTGATGGCATGTAATATTTATTCTTATACATATTTTATCTT
CTTAACATAATAAAAACCAGGATAATCACGGAATAATTAGTTATTTATTG
AAAtactaaaaatatcaaaaattatatttctattTTCTCAAACCCTACCA
GGTTATTCAATTGTTAGAATCCTGTGTTTAAAGACGATGTCATGCAGAAT
AATTAACAATCCCAGCATTAAAcaacagaagcagccggcggagagatATG
CATTCtcatcttctaggagaccacgTGTTATGACCTTCAATTTcttaatt
gttcttttttttacgGTAATTCTCTCTTGATTATACACCTGCCTCCCTAA
AAGAtttgttctgaagctttctagacaacaagaacacctTAGGcgacctt
gattatacccctgtctcgtcaaaGCACATtgttatttctagctgattaat
tttcattttaaaaatctgatcagaataaatcaaaatttctagctgaaaca
tactctcagaacacatcggaaaaaaaggttGCCTCGACGGCTGCTTTCAA
AAAAATACCACACTTAATATTTTGCTTTCATTACTTTGATCATAGAACTT
TGAAGCTGGGTTTTTATTTAAACAACATGCATCGTCTTTAAagcc
Run BLAST on NCBI

transcript from alignment at sc0000131:137493..149715+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011643 ID=TCONS_00011643|Name=TCONS_00011643|organism=Clytia hemisphaerica|type=transcript|length=12223bp|location=Sequence derived from alignment at sc0000131:137493..149715+ (Clytia hemisphaerica)
GTGGTATGTCTTCATCTGGTTCTATAGAACGTGTCAAGAAAGAGAGTATA
AAAGGAAGTGGTACAGAGGAAGTAGAGTGTCTTTCTAAGCTGAGTTTTTA
GTAAAGAGGAGAAGGGAAGAAGTCAAGATGAAGCTTTTTCTTATCTTAGT
CATTGCAATTGCTACAGTCACTCAAGGTGAGTTTTCTTATGTCATTTTGC
AATTTCATCGAAACTTTAACTTTTTGAAGCTTCTTTGACCCGAATTTTCC
GTGTAACCTGGTTATTGTTTTGGTTAGGATTTTTGCATGAAATTGCCTCC
TATTTCGTTGATTTCTGTGTCACTACTAAAGGTTTaaatgtaaccaacaa
aactatggtattttaaacattttctgttaggccaactcttcctgaatctg
aaaatttaaaagtcataatgaaaaattttgatggagaagaaaatgaagac
ttatgcgaagaattatatttcaacctttgaggaccttattttcggcgaag
aaaaaacatttcgaaaatttttttgcgttaGAAGGTGTGtctttaaccaa
actaaaaagagattttcggaaaattttagTAAAAGCTTCTTTGCCTCAAa
atcgttttttatttgaaaattttcaaatagttcaattctttgcggacaac
TTAAAATATGTTCGAACCAAAAAGGTTAAATGACCaataaaacttagcac
tttttgatGAAGAGGGTAAcataacattttattaacgtctttttaaagtt
cataaggacatgtttttttttgactgtaccaaaataCCGATTTTCAATCA
ACCCGGTTCAAATCGGCACTAACAGAGACAGCTGAACCCTTTCTTATCGc
tattcaaaaataagaaaatatattagtagctctgtccgatactttttgtc
caatcttaatagcttttatggaacttaagatatcgcttgttgaatccgga
gtattccaggatgaaaaaaatcatagtctATTTCGGATTTATAAAGTCGG
CTCTATATTTGGCTTTTGTCGTGTCCAATTTATATACGAAACTTATATCA
GGGTGTAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGGTGTAGCtaaaggattgaattttcacatcgacctcttttt
tttggaaaaaaccggaggaaaatgggatcaaattgatcatttttgaaatc
taggtgctaatcctaatcgtatatattttcctgacaaGTCTATCTATCGA
GGaggtgatttgagatttttgtttagttgaaAGAAAGGAACGAACTGAAG
AAAAAGGGAATtgttaaaatgagtgaaaaatgattaaaaaagtcgtgatg
attgttttgatcataactcactccgacctttaaaaaaattactcctcagg
ctattttatgattttaggctacctcaggaatgcatagaaacctcctcagg
accgaataatgagtcatggagtgagatatgatccaaaacactccatgatt
aattaatcctgaaatactccgaattttgaaatttcaaatagctcatttta
aagcccttctcaaatttcaatacatatcaaaatcttgggaaaattcatca
tgcgaatgacgaaataattaaaataaagtgattttcacgattttcgaaaa
cctaattttggtacagtcaaaaaaaaacatgtccataaCGTCATTATTGT
AACTAAATTCTtaaagttcttaattactcttgacAGGATGAATAATAAAC
AActtttgtaaaagaaaaatcCCTTAATTTCTTACTATGATCAGAGTCCT
TAAGTGTGCCGAAGTTTACCTGTAAGCCACGTATTGTACGCAAACAAGCC
AAAGTGATTATGATTTGATTTAAGGTTCATTAACTATGAAGaccgaataa
aaaataaacgCGAAAATCGAAGCGTAACTTTCAAAGTTTTCTATTGATTT
TTAAAGGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAAC
ACATTACCAAGTAAGTAAAACTTGCCGTTCTTTTACTACTTTTAACGGCT
TTTTCATTTTACACCTTCCAAAGTCatcattctttgaaattttcatgagA
CGCATATTTTTGACACTTGAACCCATAATGATATACCCATAATTCTTTGC
AAGGTTATGATGGACCAATGCCCGAAGAAGATGCACAATATGTTGAAGAA
ATGTACCATGATGAATTGAGTGAGtccttttaaatattttgtacaGTAAG
ATTTTCGTTATGCAAAGCAAACCCTAAAAATCCCgtattttcattcttta
tttttatcattaCTAGTATTCCCAAAGAGACATTGTATTTTAAGAAAACG
AGCGGTATTTTTGAGGTATAACAACATTTATACATGTTATATAATCCAAA
TTCATTGAAAACTGGCAATTTCCCATTCACATTGCATTTAACATCCTCAT
TCTGTCTCAATTAGCAAAAGAGTTGTTACagcaccgggtcactgagacag
aggGATGTTTTTCTACATTCTGAACTACAGCTAACCACTTGGTGTCAAGT
CTATTCTCTCTCATTTTCTTTGAGCCGATACCAAAATAACGAACGTCTAT
ATTTTAGGCTGCAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCA
ATATTGTGAAAGTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACAT
GCGGTGATTGCTCACCAGACCCAGCTCCTGGTAAGATATAATCGAAATCA
ATATATCAGTAGTAGAACCTCCCTTTAGACTTTTTATAAATCtccaaaat
aaaatttaaccATCATGCTTTGTTGCAAGGCAGTTGTTTTGAGAACATTC
GTTATCGTTAAGACTCAATGTAGACCAGTTAGACTTAGCTACAAAAATGG
GATAAATATTCAATACTTTTTTTTCATAGCTTATGTGACAGCTGAACCGA
AAATTTCAAGCTCAGAGATGGAAAGCATCAAAGGTAAGACTTCAAGACTT
CCAAGTTTTGGAAAGCGAATTTCAATCCTGAAAGCTGGTAAAAAATTGAA
TCTCGTTTGAGTGGCgataaatgaacaaaaaattataGTAAAGAAGTTAC
CAGACATGTTTTATAGCCTGTGATTAAATGTTTGTTAAGCTACAGTTATG
TATCGTTTTTCTCTTGTTTATCTAAAAGCAACTTGCTTGGCAGCTCACAA
TGCAAAACGAGGACtccacagaaacacaccctcaATGACTTATGACATGG
ATCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCGAC
GAGTGGAAACACGATGCTTTTCGAACATACAATGGCTACGAATCTGGAGT
CGGTGAAAATCTTTACTGGTCATCTTCAGCAAGTCGAACCTCTACTAATG
CTGTTGTCTCATGgtaagaaaataacaaaaaatatctCAGTCAAGGTTTT
TAATTGGTACGGTGgaattttttcgaaagtttGTCTTTGAGAGGCTTCTG
AGGGCTAAGTTTCAAATGTATTTCAAATGCCTTcaacaaagatttattat
acactggatatacaagtagcAGATTTTTGTAGATTTCTCGTGtgtagcta
tgtccgcagtaatgatattattgttgttcactctccttccctcattaaac
gatttttcgaagcatttttattgcatttctttttgaaaatcactcatcca
attcccaaaagagacttccTGCGAGAGTCAGATTCTTTCACTTAACTGCT
AATTacaagtcgttatgacgtttcaagctgtgagaaagatgcaaaagacg
tgttgtgtataagaaattgaatgttgacaccagaaattttcaaacttcaa
cctatAAAAAAACACCTTGCCACCGCGTGCCTagaaaggattttcatacc
acagtggagctaagacattcaagtcttatgtatgttaatttcagctcttc
tggggacagtcttggaaagatatttccaattgaaaattgtgtgtcactat
aagcattttgtctgaatttcttgtctaatgatgattCTCTCACACCAGTT
TTCACAAATGTATCAGgcttggtattctagccttactttcaaactttttt
tctgcaaatgtacaaaatggaagagctagagaacttttttttaaataaga
ctgataaacacttttaaaaatcagacatcttcgagccACCATGACAGTTG
TCCTTTGCggacaaagctagaacatcaattgttttctgaaacaatgaaaa
tacaatgatcgctctccatcgttttatgagtcgtttatccagtgtataat
aaatctttgccTTCAAGTTGTATATCATTCCAAGCAGAATTCTGAAACCA
CAGGTATTCTTCTATAAAAGATGTTGTAGAAAGAAAATTAACAAAGTGGA
TATTTCAACAAGGCTTGAGGCTGCTGTTGGAAATTTCTTATAATTATAGA
ATTGAATCTGTCTCGACAGTTAAAAATGAGAAagcctactctcgggtacc
taatagccgcccccgcccctgctaattaatttttcgaaatttttccaccc
agggcattcttattccaacctccccgcttattgattttttggaaaatgtt
tctaaaagttcccttttttgtcctaattctgctgtattagccaccttttc
aaaaagttttccacccagcacatttttattccaacccccccccccNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTATTGGCCATTTCACACAATTAGTTTGGGATTCTTCAACTAA
ATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTCGTTTCCA
GATATTTACCCGCTGGTAACACACAAGGCCAGTACACACAACATGTTCAT
GGGTTAAGCGCGAAAAAAGATCAACACGACCAACCTGCTgttaaagaaaa
agttttgtGAGCGAGCGACTAACACTGGTTCCTTGATGTTGTCGATTGAC
TGAAAGATGGGCTTCgacaattttgatttctaaaatatttctcatagaTT
TACGTAAACCCTTATCTCTTGTGCAGTATATATTTTGCTTACAAATCATT
CGATTTGTATTGTTTTCTTTATCTAAATATAAACTTCCTAAAAAACATTT
GTGTACTAAATTATAAATCTTCGATCCGATTTTTGGTAATCAAGGTCGTG
GGTGTTAAACCCCCAGTCGGGTCACACCATACCAAAGACAACAATAAGCA
ATAAGAAAAGGATTGAGGGCAAATGGAGCAATCCTTCGGATGAATAGTTA
TCGTAAGATGAGCTTTCGAGTCGTTCCCGGCTACTCTAAGGTCCCAAATA
AACATCCCCACCCagttattaattttcgaaaagttttagggccccccccc
ccccctttttaatttttcgaaaattttttggaCCCCCCCCCTAGCCCcag
aaaacccccccccccatttattaatttttgaaaagtttttggacCCCCCC
CCTAGCCCcagaaaacccccccccccatttattaatttttgaaaagtttt
tggacCCCCCCCCTAGCCCcagaaaacccccccccccatttattaatttt
tgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccccat
ttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacc
cccccccccatttattaatttttgaaaagtttttggacCCCCCCCCTAGC
CCcagaaaacccccccccccatttattaatttttgaaaagtttttggacC
CCCCCCCTAGCCCcagaaaacccccccccccatttattaatttttgaaaa
gtttttggacCCCCCCCCTAGCCCcagaaaacccccccccccatttatta
atttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccc
cccatttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCcaga
aaacccccccccccatttattaatttttgaaaagtttttggacCCCCCCC
CTAGCCCcagaaaacccccccccctaattataagatttaaaaaaaaattc
agtcccgCCTTTTATTCGGAACGTTGCGTTAGATTAGAGTACAGTTGCAA
ACTTATTTGCTAGAGCTAGCCAGGCAGATAGACATTGACGAGGGAGAGtt
taaaaattgatgatgaaGAGCCTTTTATAGCAGATCTTTACAGAAAAAAT
TTCCTGCAAGAACATATTCGGTACAGAATTCCAAATgtcattgaaaattt
tatttgaatcgTAAGAAATTAAGGTAGGAGATGACAATCGCTACTTCAAC
TTAAAATTCGGAGATGCAAGGTCAAAATTCATATTTCGAAATATAGGGTT
GCGTGTTTGTGTGTCGAAATATTAGTTTTTGATAATATTAAAAAGTCGGT
ATCGTTTCTTTAatcattatttttaattaataTATCTCGGTTGAATGAAA
TGGCTCACGTGAAACAAATGAGGGATAGCATGACCTTCAGTCCTTTACCT
TTGAGACACTTCCAAGGGTGGCGAGTACCAGGCTCGAAAAATAATGAAGG
AGAACTAACGTTTATTTATATTTCTTTACAAGGCAAACAACGTTCTTCTC
CACAGACTCGAATCCTTCTGTATCTCCCCGCTTAATTACCTATGTGCCTT
TTCTATGACCTATCTATTAAAGTGCAATCTTCAACATTAAGCAATAATCA
ATAATAAAAAACCATTGAATACATACGTGGCATTGAAACAGCGATGCGtg
attattgaaatttttaccGCCATCTATGTCACGTGTCAATTTAAAAGGTA
TAAAAGAGGAGCAAAGGAGGAGGAAAATTTATCATCTTTGCGTTCTATAA
AAACTCAGCATGGAGACTCTAACGTTATTACTAATTGTATTAGTATCAAT
TTCTCAAGGTAAGAAATTATAATAACTTTAGAATGAAGTTTAAATCAAAA
GATCACCGAAAAGACATTactttttgtgtcttttgtACTTGTTTTCCGTC
CcactaggcttctgctcatcctctagcgaaaagagtttcttatagcAAGT
ATATCTGTACCCCCATAGGTTCCAAGTACTAGAAGTTTAGATGGCTCACA
TACATGGTGTATAATCTAGGTCAAATTGGCTTTATTTTGATTGTATGCAA
GATCAGATATATTAggtctttgaaaaataaacgcGAAAATCGAAGCGTAA
CTTTCAAAgttttatattgattttcaaAGGTAAACATGTCAAACGTTCAC
ACCAAGATCACAAAAAGGTCAACACATTACCAAGTAAGtaaaacttgact
tcactgggGAGGGGGGGGGCTCTTCAAATTAGGATATAAACCATTGGAAC
ATGACTGTGAGACGGCTCGAACAGTACGGCACGATACCCTATATTTAATG
ACCCtatatttttaagaacatccttATATATAGGGAAGTCGTCCTTACAT
TAACGAGAAACAGAGTATTCTTCATCAATACTTGAGTTTCATGCTCTTTA
CAATCATCAGCTTAGGGAATTCCTTATATTTAAGGACCTTTTTTCCTACT
GATCTTCATTTAATCTACTGGGTCGAGGAAATAAAAACGATCTAGTGAGC
AGAAGTCCCTATAAATAGGGAGGTCCTTAAATGTAGGGTATCGTGCGGTA
GGTTATGATGGACCAATGTCATACAACTCTTGTCTTGTACTTTATTGCTA
AGAAGGTCAAAGTTTAACGAACAAATACATTCTTATTCAATCAAGGTTAC
GATGGACCAATGCCCGAAGAAGATGCACAATATGATGAAGAAATGTACCA
TGACAGTTTAAGTGAgtcttttcaaatattttgtatgGTAAACAATATAA
AATTTGACAACTCAATATCCACCTAAAATCCTAATAAATGACGTATTCCC
ATGAATTCTCCAGCTAAATTCCCGTATGTTAAATATCGCTAGCGATTATA
AGTAAACATTTCAAGAGCAATTAGTGCAAAGGAGGTATGGGATTTCAAGT
CGTACAAAGGAATAGATTTGTGCAGATTTTTTACTAATTTAGAAACCAAA
GTGTGCTACTAAGTCAATACACTTTCATCCCACTCAAAAAAATGGCCTCT
CTTTGATTATGATGTCTGACTGATAATTTGTTCTTTTCGgcttaatattt
tattttctttgagcCGATACTAAAATAACGAACGTCTATATTTTAGGCTG
CAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCGATATTGTGAAA
GTCACAGTTTTGTGAAGACGGATTGGTGCCGGAAAACATGTGGTGATTGC
TCACCAGACCCAGCTCCTGGTAAGATGTAATCGAAATAAAAAACTTCGTG
ATGACATTGAGTTTAAATCATAGCTAAACTTTGTACCAAGTTCAAGGTTG
AAGTCATACCTTAGCAACTATAGATTAAACATTATTGAAGGTAAAAAACA
CCCACCGCCTTGATAATACGAACCTCGAAAGCCTCATAATATGATAGGGC
TACGGCTTTAGATGATTAATTAGAATGGAATTGTTAATTTGTAAATAAAG
TTGTAAAAGCATGACAGGCTAAGGCCGAAGCTCAAGAACCCATCATCATC
GGAATATGCTTGGTTGATAAATCGaataaatatttaatattttgtttCAT
AGCTTATGTGACAGCTCAACCGAAAATTTCAAGCTCAGAGATGGAAAGCA
TCAAAGGTATGACTATTAACTTTCACTATCATTAAAGCTTTATTCCTGAT
CAAAGTACAGAAATTTTTGTGATATTTGTGATTTACGATGGAAACTTTGT
TTAGCTATATTTATCCTTTTTTCTTGTTTATCTAAAAGCAACTTGCTTGG
CAGCTCACAATGCGAAACGAGGACTCCACAAAAACACACCCTCAATGACT
TATGACATGGAGCTTGCAAAACGAGCTCAAACCTACGCAGAATATCTCCT
GGAATTCGACGAGTGGAAACACGATGCCTTTCGAAAATACAATGGCTACG
AATCTGGAGTCGGTGAAAATCTTTACTGGTCATCTTCAGCAAGTCGAACC
TCTACTAATGCTGTTGTCTCATGGTAAGAAAATAACAGAGAAATATCTTA
TTCAAGATTCTTAACACGTTCACATCCGAGGTTGAATTTTATCGAATGTT
TTAATTTGAGAGAGTTATGTGAAGGCAGGGGGGTACTGTCTCACAGGGGT
TCTCGATTCCACCagctttttccaaaatttccgtcaaactatttaaaaag
aagcaaaattccgtcaccgaaaattcctttgaagtttttgtcgaaaattc
cgcaaatttcgaatatttttgctaaattccgtttatCCACACCCCTTGCC
CTCAAATAGCTCTCTCAAACAAAGTAAAACTTTCGATGAAATTCAAGTTC
GGTTGTGGACGTGTTAAGACCCTTGTCGAATTCTTTCCGCCTCCGTCAGA
TGACCCTGTTTCCGAAATTCCGTTTAAATTTTCGTCAAGTTCCACCAATC
CGTCCGAAAAAAAGTCTATTCCGCTCCAAGCCACGGACCTCCCTTATGTG
TTTGAGTTTCCAATACGTTTACGTCGAATTCCACGTAGATTTTAAAAGGC
GTAACAAAAAGAAGGTGAAAATCTAGGTATCAAAAGTGGAATGACCCCTC
TACAAAATATACTCTCAGTCctcgagtgacttagggcaagtctcaaaaac
ctaacagtttaccctaagttttcgctaccaatagcagccagattcagaga
tccacttagggctctaaagtacctctataccttaaggtttcagggcccgg
ttgttacgtaattaaatattaacataaaaattaattattaaagaaattgt
aatcatgacgtcataatttgatcgaatttggtgacgtcatgaatcgCATA
ATCGTTATAATATAAAAAGTACATGTCAAATCtttcccaaatttgaacca
aagatgcatctaactgaaatataactttttgaaaaaaaatttttggaaaa
atttgatgacgtcagcaaaaaattgcatttttcgattttttgcatttttt
gctgacgtcatcaaaatcgtcaaaaaatttttcattgaaaagttcggcac
cattaagatgcatctttggtccaaatttgacaaagatttgacatgtactt
atagagttagagctaatttacgctttatgacgtcataatttgatgacgtc
acaattcacactttctttaataattaatttttaggttaatatttaattac
gtaacatcGGATCCTGAAACTTTAAGGTATGggtcatctaaaaatccata
agtgaatccctgagaatgggtgctattggtcgcggattcgggatttgtga
ttttttaaaaNTTTAAggtataggtcatctaaaaatccataagtgaatcc
ctgagaatgggtgctattggtcgcggattcgggatttgtgattttttaaa
atctagacacgccctaactcacccgagtCAGCAGCGtgatttaaattttg
aaacatgTATTCATAGATCAtgtgaaaaatcttttaaaagtatgaaagat
ttttaagaaatttttcaacaaagGTTAAAGCTCCGGgaaattatttattt
atcatAATTGTTACATATGGTTAAACCTACAGGCTAAAGAAACTGGAAGG
AGAACCATTTTGATTATATTCTGTGGTTAATTTCAGGTATAACGAAATCA
ACAACTACAATTTTACAACTGGCAAGTCAAACGGTGGAGATATTGGTCAT
TTCACACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGC
TAAAGGAACAGGTGGAACTTATGTCGTTTCCAGATATTTGTCATCTGGTA
ACACCAATATACACAACATGTTCATGGgttgaaatctaaaaaagatgaaa
aagaagacCCCCCTGCTATCGAAGAAGTCTTGTAAAAAAACCTTCTTTTT
AAAATAACAAGAAATAATCCTGTTCGCTTTTCTCTGGATgtaattcttaa
atttttgcaagggtttatattttacatttttctttgttACATAAAGTCCA
TAACGTATTTAATATCTAAATTAATCTATATTTGTCACTGATGGCATGTA
ATATTTATTCTTATACATATTTTATCTTCTTAACATAATAAAAACCAGGA
TAATCACGGAATAATTAGTTATTTATTGAAAtactaaaaatatcaaaaat
tatatttctattTTCTCAAACCCTACCAGGTTATTCAATTGTTAGAATCC
TGTGTTTAAAGACGATGTCATGCAGAATAATTAACAATCCCAGCATTAAA
caacagaagcagccggcggagagatATGCATTCtcatcttctaggagacc
acgTGTTATGACCTTCAATTTcttaattgttcttttttttacgGTAATTC
TCTCTTGATTATACACCTGCCTCCCTAAAAGAtttgttctgaagctttct
agacaacaagaacacctTAGGcgaccttgattatacccctgtctcgtcaa
aGCACATtgttatttctagctgattaattttcattttaaaaatctgatca
gaataaatcaaaatttctagctgaaacatactctcagaacacatcggaaa
aaaaggttGCCTCGACGGCTGCTTTCAAAAAAATACCACACTTAATATTT
TGCTTTCATTACTTTGATCATAGAACTTTGAAGCTGGGTTTTTATTTAAA
CAACATGCATCGTCTTTAAagcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006532XLOC_006532Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011643-exon-sc0000131-1491911889:137493..137668TCONS_00011643-exon-sc0000131-1491911889:137493..137668Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:137493..137668TCONS_00011643-exon-sc0000131-1510915933:137493..137668Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:137493..137668TCONS_00011643-exon-sc0000131-1575043694:137493..137668Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1491911889:139549..139602TCONS_00011643-exon-sc0000131-1491911889:139549..139602Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:139549..139602TCONS_00011643-exon-sc0000131-1510915933:139549..139602Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:139549..139602TCONS_00011643-exon-sc0000131-1575043694:139549..139602Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1491911889:139746..139811TCONS_00011643-exon-sc0000131-1491911889:139746..139811Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:139746..139811TCONS_00011643-exon-sc0000131-1510915933:139746..139811Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:139746..139811TCONS_00011643-exon-sc0000131-1575043694:139746..139811Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1491911889:140200..140322TCONS_00011643-exon-sc0000131-1491911889:140200..140322Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:140200..140322TCONS_00011643-exon-sc0000131-1510915933:140200..140322Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:140200..140322TCONS_00011643-exon-sc0000131-1575043694:140200..140322Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1491911889:146645..146698TCONS_00011643-exon-sc0000131-1491911889:146645..146698Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:146645..146698TCONS_00011643-exon-sc0000131-1510915933:146645..146698Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:146645..146698TCONS_00011643-exon-sc0000131-1575043694:146645..146698Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1491911889:146831..147065TCONS_00011643-exon-sc0000131-1491911889:146831..147065Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:146831..147065TCONS_00011643-exon-sc0000131-1510915933:146831..147065Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:146831..147065TCONS_00011643-exon-sc0000131-1575043694:146831..147065Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1491911889:148679..149715TCONS_00011643-exon-sc0000131-1491911889:148679..149715Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1510915933:148679..149715TCONS_00011643-exon-sc0000131-1510915933:148679..149715Clytia hemisphaericaexon
TCONS_00011643-exon-sc0000131-1575043694:148679..149715TCONS_00011643-exon-sc0000131-1575043694:148679..149715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:137493..149715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.393224	0.0579001	0.168418	0.0616635	0.764906	0.548008	5.20467	6.69432	10.526	6.14667	2.82516	11.6989	0	0	0.653592	0.0786052	65.4485	49.0256	0	6.49966e-06	3.97212e-06	0	0	0	0	0	0	0	0.678257	0.290718
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011643 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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