TCONS_00011641 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011641
Unique NameTCONS_00011641
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1821

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011641 ID=TCONS_00011641|Name=TCONS_00011641|organism=Clytia hemisphaerica|type=transcript|length=1821bp
CTGTATCCACGATTACCTTTCACCGAGCGATTAAAGTAATATATTTTGTA
TTACaatcaaagacattgaaaaGGGTGTGGTATGTCTTCATCTGGTTCTA
TAGAACGTGTCAAGAAAGAGAGTATAAAAGGAAGTGGTACAGAGGAAGTA
GAGTGTCTTTCTAAGCTGAGTTTTTAGTAAAGAGGAGAAGGGAAGAAGTC
AAGATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCA
AGGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACACAT
TACCAAGTTATGATGGACCAATGCCCGAAGAAGATGCACAATATGTTGAA
GAAATGTACCATGATGAATTGAGCTGCAAGGATAAATATTCAAATTGTCC
AACTTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGTGAAGACGGATT
GGTGTCGGAAAACATGCGGTGATTGCTCACCAGACCCAGCTCCTGCTTAT
GTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGC
AACTTGCTTGGCAGCTCACAATGCGAAACGAGGACTCCACAAAAACACAC
CCTCAATGACTTATGACATGGAGCTTGCAAAACGAGCTCAAACCTACGCA
GAATATCTCCTGGAATTCGACGAGTGGAAACACGATGCCTTTCGAAAATA
CAATGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATCTTCAG
CAAGTCGAACCTCTACTAATGCTGTTGTCTCATGGTATAACGAAATCAAC
AACTACAATTTTACAACTGGCAAGTCAAACGGTGGAGATATTGGTCATTT
CACACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTA
AAGGAACAGGTGGAACTTATGTCGTTTCCAGATATTTGTCATCTGGTAAC
ACCAATATACACAACATGTTCATGGgttgaaatctaaaaaagatgaaaaa
gaagacCCCCCTGCTATCGAAGAAGTCTTGTAAAAAAACCTTCTTTTTAA
AATAACAAGAAATAATCCTGTTCGCTTTTCTCTGGATgtaattcttaaat
ttttgcaagggtttatattttacatttttctttgttACATAAAGTCCATA
ACGTATTTAATATCTAAATTAATCTATATTTGTCACTGATGGCATGTAAT
ATTTATTCTTATACATATTTTATCTTCTTAACATAATAAAAACCAGGATA
ATCACGGAATAATTAGTTATTTATTGAAAtactaaaaatatcaaaaatta
tatttctattTTCTCAAACCCTACCAGGTTATTCAATTGTTAGAATCCTG
TGTTTAAAGACGATGTCATGCAGAATAATTAACAATCCCAGCATTAAAca
acagaagcagccggcggagagatATGCATTCtcatcttctaggagaccac
gTGTTATGACCTTCAATTTcttaattgttcttttttttacgGTAATTCTC
TCTTGATTATACACCTGCCTCCCTAAAAGAtttgttctgaagctttctag
acaacaagaacacctTAGGcgaccttgattatacccctgtctcgtcaaaG
CACATtgttatttctagctgattaattttcattttaaaaatctgatcaga
ataaatcaaaatttctagctgaaacatactctcagaacacatcggaaaaa
aaggttGCCTCGACGGCTGCTTTCAAAAAAATACCACACTTAATATTTTG
CTTTCATTACTTTGATCATAGAACTTTGAAGCTGGGTTTTTATTTAAACA
ACATGCATCGTCTTTAAagcc
Run BLAST on NCBI

transcript from alignment at sc0000131:137417..149715+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011641 ID=TCONS_00011641|Name=TCONS_00011641|organism=Clytia hemisphaerica|type=transcript|length=12299bp|location=Sequence derived from alignment at sc0000131:137417..149715+ (Clytia hemisphaerica)
CTGTATCCACGATTACCTTTCACCGAGCGATTAAAGTAATATATTTTGTA
TTACaatcaaagacattgaaaaGGGTGTGGTATGTCTTCATCTGGTTCTA
TAGAACGTGTCAAGAAAGAGAGTATAAAAGGAAGTGGTACAGAGGAAGTA
GAGTGTCTTTCTAAGCTGAGTTTTTAGTAAAGAGGAGAAGGGAAGAAGTC
AAGATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCA
AGGTGAGTTTTCTTATGTCATTTTGCAATTTCATCGAAACTTTAACTTTT
TGAAGCTTCTTTGACCCGAATTTTCCGTGTAACCTGGTTATTGTTTTGGT
TAGGATTTTTGCATGAAATTGCCTCCTATTTCGTTGATTTCTGTGTCACT
ACTAAAGGTTTaaatgtaaccaacaaaactatggtattttaaacattttc
tgttaggccaactcttcctgaatctgaaaatttaaaagtcataatgaaaa
attttgatggagaagaaaatgaagacttatgcgaagaattatatttcaac
ctttgaggaccttattttcggcgaagaaaaaacatttcgaaaattttttt
gcgttaGAAGGTGTGtctttaaccaaactaaaaagagattttcggaaaat
tttagTAAAAGCTTCTTTGCCTCAAaatcgttttttatttgaaaattttc
aaatagttcaattctttgcggacaacTTAAAATATGTTCGAACCAAAAAG
GTTAAATGACCaataaaacttagcactttttgatGAAGAGGGTAAcataa
cattttattaacgtctttttaaagttcataaggacatgtttttttttgac
tgtaccaaaataCCGATTTTCAATCAACCCGGTTCAAATCGGCACTAACA
GAGACAGCTGAACCCTTTCTTATCGctattcaaaaataagaaaatatatt
agtagctctgtccgatactttttgtccaatcttaatagcttttatggaac
ttaagatatcgcttgttgaatccggagtattccaggatgaaaaaaatcat
agtctATTTCGGATTTATAAAGTCGGCTCTATATTTGGCTTTTGTCGTGT
CCAATTTATATACGAAACTTATATCAGGGTGTAGCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGTAGCtaaagga
ttgaattttcacatcgacctcttttttttggaaaaaaccggaggaaaatg
ggatcaaattgatcatttttgaaatctaggtgctaatcctaatcgtatat
attttcctgacaaGTCTATCTATCGAGGaggtgatttgagatttttgttt
agttgaaAGAAAGGAACGAACTGAAGAAAAAGGGAATtgttaaaatgagt
gaaaaatgattaaaaaagtcgtgatgattgttttgatcataactcactcc
gacctttaaaaaaattactcctcaggctattttatgattttaggctacct
caggaatgcatagaaacctcctcaggaccgaataatgagtcatggagtga
gatatgatccaaaacactccatgattaattaatcctgaaatactccgaat
tttgaaatttcaaatagctcattttaaagcccttctcaaatttcaataca
tatcaaaatcttgggaaaattcatcatgcgaatgacgaaataattaaaat
aaagtgattttcacgattttcgaaaacctaattttggtacagtcaaaaaa
aaacatgtccataaCGTCATTATTGTAACTAAATTCTtaaagttcttaat
tactcttgacAGGATGAATAATAAACAActtttgtaaaagaaaaatcCCT
TAATTTCTTACTATGATCAGAGTCCTTAAGTGTGCCGAAGTTTACCTGTA
AGCCACGTATTGTACGCAAACAAGCCAAAGTGATTATGATTTGATTTAAG
GTTCATTAACTATGAAGaccgaataaaaaataaacgCGAAAATCGAAGCG
TAACTTTCAAAGTTTTCTATTGATTTTTAAAGGTAAACATGTCAAACGTT
CACACCAAGATCACAAAAAGGTCAACACATTACCAAGTAAGTAAAACTTG
CCGTTCTTTTACTACTTTTAACGGCTTTTTCATTTTACACCTTCCAAAGT
CatcattctttgaaattttcatgagACGCATATTTTTGACACTTGAACCC
ATAATGATATACCCATAATTCTTTGCAAGGTTATGATGGACCAATGCCCG
AAGAAGATGCACAATATGTTGAAGAAATGTACCATGATGAATTGAGTGAG
tccttttaaatattttgtacaGTAAGATTTTCGTTATGCAAAGCAAACCC
TAAAAATCCCgtattttcattctttatttttatcattaCTAGTATTCCCA
AAGAGACATTGTATTTTAAGAAAACGAGCGGTATTTTTGAGGTATAACAA
CATTTATACATGTTATATAATCCAAATTCATTGAAAACTGGCAATTTCCC
ATTCACATTGCATTTAACATCCTCATTCTGTCTCAATTAGCAAAAGAGTT
GTTACagcaccgggtcactgagacagaggGATGTTTTTCTACATTCTGAA
CTACAGCTAACCACTTGGTGTCAAGTCTATTCTCTCTCATTTTCTTTGAG
CCGATACCAAAATAACGAACGTCTATATTTTAGGCTGCAAGGATAAATAT
TCAAATTGTCCAACTTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGT
GAAGACGGATTGGTGTCGGAAAACATGCGGTGATTGCTCACCAGACCCAG
CTCCTGGTAAGATATAATCGAAATCAATATATCAGTAGTAGAACCTCCCT
TTAGACTTTTTATAAATCtccaaaataaaatttaaccATCATGCTTTGTT
GCAAGGCAGTTGTTTTGAGAACATTCGTTATCGTTAAGACTCAATGTAGA
CCAGTTAGACTTAGCTACAAAAATGGGATAAATATTCAATACTTTTTTTT
CATAGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAA
GCATCAAAGGTAAGACTTCAAGACTTCCAAGTTTTGGAAAGCGAATTTCA
ATCCTGAAAGCTGGTAAAAAATTGAATCTCGTTTGAGTGGCgataaatga
acaaaaaattataGTAAAGAAGTTACCAGACATGTTTTATAGCCTGTGAT
TAAATGTTTGTTAAGCTACAGTTATGTATCGTTTTTCTCTTGTTTATCTA
AAAGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGGACtccacagaaa
cacaccctcaATGACTTATGACATGGATCTCGCGAAACGTGCTCAAACCT
ACGCAGAATATCTCCTGGAATTCGACGAGTGGAAACACGATGCTTTTCGA
ACATACAATGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATC
TTCAGCAAGTCGAACCTCTACTAATGCTGTTGTCTCATGgtaagaaaata
acaaaaaatatctCAGTCAAGGTTTTTAATTGGTACGGTGgaattttttc
gaaagtttGTCTTTGAGAGGCTTCTGAGGGCTAAGTTTCAAATGTATTTC
AAATGCCTTcaacaaagatttattatacactggatatacaagtagcAGAT
TTTTGTAGATTTCTCGTGtgtagctatgtccgcagtaatgatattattgt
tgttcactctccttccctcattaaacgatttttcgaagcatttttattgc
atttctttttgaaaatcactcatccaattcccaaaagagacttccTGCGA
GAGTCAGATTCTTTCACTTAACTGCTAATTacaagtcgttatgacgtttc
aagctgtgagaaagatgcaaaagacgtgttgtgtataagaaattgaatgt
tgacaccagaaattttcaaacttcaacctatAAAAAAACACCTTGCCACC
GCGTGCCTagaaaggattttcataccacagtggagctaagacattcaagt
cttatgtatgttaatttcagctcttctggggacagtcttggaaagatatt
tccaattgaaaattgtgtgtcactataagcattttgtctgaatttcttgt
ctaatgatgattCTCTCACACCAGTTTTCACAAATGTATCAGgcttggta
ttctagccttactttcaaactttttttctgcaaatgtacaaaatggaaga
gctagagaacttttttttaaataagactgataaacacttttaaaaatcag
acatcttcgagccACCATGACAGTTGTCCTTTGCggacaaagctagaaca
tcaattgttttctgaaacaatgaaaatacaatgatcgctctccatcgttt
tatgagtcgtttatccagtgtataataaatctttgccTTCAAGTTGTATA
TCATTCCAAGCAGAATTCTGAAACCACAGGTATTCTTCTATAAAAGATGT
TGTAGAAAGAAAATTAACAAAGTGGATATTTCAACAAGGCTTGAGGCTGC
TGTTGGAAATTTCTTATAATTATAGAATTGAATCTGTCTCGACAGTTAAA
AATGAGAAagcctactctcgggtacctaatagccgcccccgcccctgcta
attaatttttcgaaatttttccacccagggcattcttattccaacctccc
cgcttattgattttttggaaaatgtttctaaaagttcccttttttgtcct
aattctgctgtattagccaccttttcaaaaagttttccacccagcacatt
tttattccaacccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGCCATTTCACA
CAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGG
AACAGGTGGAACTTACGTCGTTTCCAGATATTTACCCGCTGGTAACACAC
AAGGCCAGTACACACAACATGTTCATGGGTTAAGCGCGAAAAAAGATCAA
CACGACCAACCTGCTgttaaagaaaaagttttgtGAGCGAGCGACTAACA
CTGGTTCCTTGATGTTGTCGATTGACTGAAAGATGGGCTTCgacaatttt
gatttctaaaatatttctcatagaTTTACGTAAACCCTTATCTCTTGTGC
AGTATATATTTTGCTTACAAATCATTCGATTTGTATTGTTTTCTTTATCT
AAATATAAACTTCCTAAAAAACATTTGTGTACTAAATTATAAATCTTCGA
TCCGATTTTTGGTAATCAAGGTCGTGGGTGTTAAACCCCCAGTCGGGTCA
CACCATACCAAAGACAACAATAAGCAATAAGAAAAGGATTGAGGGCAAAT
GGAGCAATCCTTCGGATGAATAGTTATCGTAAGATGAGCTTTCGAGTCGT
TCCCGGCTACTCTAAGGTCCCAAATAAACATCCCCACCCagttattaatt
ttcgaaaagttttagggcccccccccccccctttttaatttttcgaaaat
tttttggaCCCCCCCCCTAGCCCcagaaaacccccccccccatttattaa
tttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaaccccccccc
ccatttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaa
aacccccccccccatttattaatttttgaaaagtttttggacCCCCCCCC
TAGCCCcagaaaacccccccccccatttattaatttttgaaaagtttttg
gacCCCCCCCCTAGCCCcagaaaacccccccccccatttattaatttttg
aaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccccattt
attaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccc
cccccccatttattaatttttgaaaagtttttggacCCCCCCCCTAGCCC
cagaaaacccccccccccatttattaatttttgaaaagtttttggacCCC
CCCCCTAGCCCcagaaaacccccccccccatttattaatttttgaaaagt
ttttggacCCCCCCCCTAGCCCcagaaaacccccccccccatttattaat
ttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccc
taattataagatttaaaaaaaaattcagtcccgCCTTTTATTCGGAACGT
TGCGTTAGATTAGAGTACAGTTGCAAACTTATTTGCTAGAGCTAGCCAGG
CAGATAGACATTGACGAGGGAGAGtttaaaaattgatgatgaaGAGCCTT
TTATAGCAGATCTTTACAGAAAAAATTTCCTGCAAGAACATATTCGGTAC
AGAATTCCAAATgtcattgaaaattttatttgaatcgTAAGAAATTAAGG
TAGGAGATGACAATCGCTACTTCAACTTAAAATTCGGAGATGCAAGGTCA
AAATTCATATTTCGAAATATAGGGTTGCGTGTTTGTGTGTCGAAATATTA
GTTTTTGATAATATTAAAAAGTCGGTATCGTTTCTTTAatcattattttt
aattaataTATCTCGGTTGAATGAAATGGCTCACGTGAAACAAATGAGGG
ATAGCATGACCTTCAGTCCTTTACCTTTGAGACACTTCCAAGGGTGGCGA
GTACCAGGCTCGAAAAATAATGAAGGAGAACTAACGTTTATTTATATTTC
TTTACAAGGCAAACAACGTTCTTCTCCACAGACTCGAATCCTTCTGTATC
TCCCCGCTTAATTACCTATGTGCCTTTTCTATGACCTATCTATTAAAGTG
CAATCTTCAACATTAAGCAATAATCAATAATAAAAAACCATTGAATACAT
ACGTGGCATTGAAACAGCGATGCGtgattattgaaatttttaccGCCATC
TATGTCACGTGTCAATTTAAAAGGTATAAAAGAGGAGCAAAGGAGGAGGA
AAATTTATCATCTTTGCGTTCTATAAAAACTCAGCATGGAGACTCTAACG
TTATTACTAATTGTATTAGTATCAATTTCTCAAGGTAAGAAATTATAATA
ACTTTAGAATGAAGTTTAAATCAAAAGATCACCGAAAAGACATTactttt
tgtgtcttttgtACTTGTTTTCCGTCCcactaggcttctgctcatcctct
agcgaaaagagtttcttatagcAAGTATATCTGTACCCCCATAGGTTCCA
AGTACTAGAAGTTTAGATGGCTCACATACATGGTGTATAATCTAGGTCAA
ATTGGCTTTATTTTGATTGTATGCAAGATCAGATATATTAggtctttgaa
aaataaacgcGAAAATCGAAGCGTAACTTTCAAAgttttatattgatttt
caaAGGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACA
CATTACCAAGTAAGtaaaacttgacttcactgggGAGGGGGGGGGCTCTT
CAAATTAGGATATAAACCATTGGAACATGACTGTGAGACGGCTCGAACAG
TACGGCACGATACCCTATATTTAATGACCCtatatttttaagaacatcct
tATATATAGGGAAGTCGTCCTTACATTAACGAGAAACAGAGTATTCTTCA
TCAATACTTGAGTTTCATGCTCTTTACAATCATCAGCTTAGGGAATTCCT
TATATTTAAGGACCTTTTTTCCTACTGATCTTCATTTAATCTACTGGGTC
GAGGAAATAAAAACGATCTAGTGAGCAGAAGTCCCTATAAATAGGGAGGT
CCTTAAATGTAGGGTATCGTGCGGTAGGTTATGATGGACCAATGTCATAC
AACTCTTGTCTTGTACTTTATTGCTAAGAAGGTCAAAGTTTAACGAACAA
ATACATTCTTATTCAATCAAGGTTACGATGGACCAATGCCCGAAGAAGAT
GCACAATATGATGAAGAAATGTACCATGACAGTTTAAGTGAgtcttttca
aatattttgtatgGTAAACAATATAAAATTTGACAACTCAATATCCACCT
AAAATCCTAATAAATGACGTATTCCCATGAATTCTCCAGCTAAATTCCCG
TATGTTAAATATCGCTAGCGATTATAAGTAAACATTTCAAGAGCAATTAG
TGCAAAGGAGGTATGGGATTTCAAGTCGTACAAAGGAATAGATTTGTGCA
GATTTTTTACTAATTTAGAAACCAAAGTGTGCTACTAAGTCAATACACTT
TCATCCCACTCAAAAAAATGGCCTCTCTTTGATTATGATGTCTGACTGAT
AATTTGTTCTTTTCGgcttaatattttattttctttgagcCGATACTAAA
ATAACGAACGTCTATATTTTAGGCTGCAAGGATAAATATTCAAATTGTCC
AACTTCTTTGCGTCGATATTGTGAAAGTCACAGTTTTGTGAAGACGGATT
GGTGCCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGGTAAG
ATGTAATCGAAATAAAAAACTTCGTGATGACATTGAGTTTAAATCATAGC
TAAACTTTGTACCAAGTTCAAGGTTGAAGTCATACCTTAGCAACTATAGA
TTAAACATTATTGAAGGTAAAAAACACCCACCGCCTTGATAATACGAACC
TCGAAAGCCTCATAATATGATAGGGCTACGGCTTTAGATGATTAATTAGA
ATGGAATTGTTAATTTGTAAATAAAGTTGTAAAAGCATGACAGGCTAAGG
CCGAAGCTCAAGAACCCATCATCATCGGAATATGCTTGGTTGATAAATCG
aataaatatttaatattttgtttCATAGCTTATGTGACAGCTCAACCGAA
AATTTCAAGCTCAGAGATGGAAAGCATCAAAGGTATGACTATTAACTTTC
ACTATCATTAAAGCTTTATTCCTGATCAAAGTACAGAAATTTTTGTGATA
TTTGTGATTTACGATGGAAACTTTGTTTAGCTATATTTATCCTTTTTTCT
TGTTTATCTAAAAGCAACTTGCTTGGCAGCTCACAATGCGAAACGAGGAC
TCCACAAAAACACACCCTCAATGACTTATGACATGGAGCTTGCAAAACGA
GCTCAAACCTACGCAGAATATCTCCTGGAATTCGACGAGTGGAAACACGA
TGCCTTTCGAAAATACAATGGCTACGAATCTGGAGTCGGTGAAAATCTTT
ACTGGTCATCTTCAGCAAGTCGAACCTCTACTAATGCTGTTGTCTCATGG
TAAGAAAATAACAGAGAAATATCTTATTCAAGATTCTTAACACGTTCACA
TCCGAGGTTGAATTTTATCGAATGTTTTAATTTGAGAGAGTTATGTGAAG
GCAGGGGGGTACTGTCTCACAGGGGTTCTCGATTCCACCagctttttcca
aaatttccgtcaaactatttaaaaagaagcaaaattccgtcaccgaaaat
tcctttgaagtttttgtcgaaaattccgcaaatttcgaatatttttgcta
aattccgtttatCCACACCCCTTGCCCTCAAATAGCTCTCTCAAACAAAG
TAAAACTTTCGATGAAATTCAAGTTCGGTTGTGGACGTGTTAAGACCCTT
GTCGAATTCTTTCCGCCTCCGTCAGATGACCCTGTTTCCGAAATTCCGTT
TAAATTTTCGTCAAGTTCCACCAATCCGTCCGAAAAAAAGTCTATTCCGC
TCCAAGCCACGGACCTCCCTTATGTGTTTGAGTTTCCAATACGTTTACGT
CGAATTCCACGTAGATTTTAAAAGGCGTAACAAAAAGAAGGTGAAAATCT
AGGTATCAAAAGTGGAATGACCCCTCTACAAAATATACTCTCAGTCctcg
agtgacttagggcaagtctcaaaaacctaacagtttaccctaagttttcg
ctaccaatagcagccagattcagagatccacttagggctctaaagtacct
ctataccttaaggtttcagggcccggttgttacgtaattaaatattaaca
taaaaattaattattaaagaaattgtaatcatgacgtcataatttgatcg
aatttggtgacgtcatgaatcgCATAATCGTTATAATATAAAAAGTACAT
GTCAAATCtttcccaaatttgaaccaaagatgcatctaactgaaatataa
ctttttgaaaaaaaatttttggaaaaatttgatgacgtcagcaaaaaatt
gcatttttcgattttttgcattttttgctgacgtcatcaaaatcgtcaaa
aaatttttcattgaaaagttcggcaccattaagatgcatctttggtccaa
atttgacaaagatttgacatgtacttatagagttagagctaatttacgct
ttatgacgtcataatttgatgacgtcacaattcacactttctttaataat
taatttttaggttaatatttaattacgtaacatcGGATCCTGAAACTTTA
AGGTATGggtcatctaaaaatccataagtgaatccctgagaatgggtgct
attggtcgcggattcgggatttgtgattttttaaaaNTTTAAggtatagg
tcatctaaaaatccataagtgaatccctgagaatgggtgctattggtcgc
ggattcgggatttgtgattttttaaaatctagacacgccctaactcaccc
gagtCAGCAGCGtgatttaaattttgaaacatgTATTCATAGATCAtgtg
aaaaatcttttaaaagtatgaaagatttttaagaaatttttcaacaaagG
TTAAAGCTCCGGgaaattatttatttatcatAATTGTTACATATGGTTAA
ACCTACAGGCTAAAGAAACTGGAAGGAGAACCATTTTGATTATATTCTGT
GGTTAATTTCAGGTATAACGAAATCAACAACTACAATTTTACAACTGGCA
AGTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCT
TCAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTATGT
CGTTTCCAGATATTTGTCATCTGGTAACACCAATATACACAACATGTTCA
TGGgttgaaatctaaaaaagatgaaaaagaagacCCCCCTGCTATCGAAG
AAGTCTTGTAAAAAAACCTTCTTTTTAAAATAACAAGAAATAATCCTGTT
CGCTTTTCTCTGGATgtaattcttaaatttttgcaagggtttatatttta
catttttctttgttACATAAAGTCCATAACGTATTTAATATCTAAATTAA
TCTATATTTGTCACTGATGGCATGTAATATTTATTCTTATACATATTTTA
TCTTCTTAACATAATAAAAACCAGGATAATCACGGAATAATTAGTTATTT
ATTGAAAtactaaaaatatcaaaaattatatttctattTTCTCAAACCCT
ACCAGGTTATTCAATTGTTAGAATCCTGTGTTTAAAGACGATGTCATGCA
GAATAATTAACAATCCCAGCATTAAAcaacagaagcagccggcggagaga
tATGCATTCtcatcttctaggagaccacgTGTTATGACCTTCAATTTctt
aattgttcttttttttacgGTAATTCTCTCTTGATTATACACCTGCCTCC
CTAAAAGAtttgttctgaagctttctagacaacaagaacacctTAGGcga
ccttgattatacccctgtctcgtcaaaGCACATtgttatttctagctgat
taattttcattttaaaaatctgatcagaataaatcaaaatttctagctga
aacatactctcagaacacatcggaaaaaaaggttGCCTCGACGGCTGCTT
TCAAAAAAATACCACACTTAATATTTTGCTTTCATTACTTTGATCATAGA
ACTTTGAAGCTGGGTTTTTATTTAAACAACATGCATCGTCTTTAAagcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006532XLOC_006532Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011641-exon-sc0000131-1491911889:137417..137668TCONS_00011641-exon-sc0000131-1491911889:137417..137668Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:137417..137668TCONS_00011641-exon-sc0000131-1510915933:137417..137668Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:137417..137668TCONS_00011641-exon-sc0000131-1575043694:137417..137668Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1491911889:139549..139602TCONS_00011641-exon-sc0000131-1491911889:139549..139602Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:139549..139602TCONS_00011641-exon-sc0000131-1510915933:139549..139602Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:139549..139602TCONS_00011641-exon-sc0000131-1575043694:139549..139602Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1491911889:139746..139811TCONS_00011641-exon-sc0000131-1491911889:139746..139811Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:139746..139811TCONS_00011641-exon-sc0000131-1510915933:139746..139811Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:139746..139811TCONS_00011641-exon-sc0000131-1575043694:139746..139811Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1491911889:140200..140322TCONS_00011641-exon-sc0000131-1491911889:140200..140322Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:140200..140322TCONS_00011641-exon-sc0000131-1510915933:140200..140322Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:140200..140322TCONS_00011641-exon-sc0000131-1575043694:140200..140322Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1491911889:140522..140575TCONS_00011641-exon-sc0000131-1491911889:140522..140575Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:140522..140575TCONS_00011641-exon-sc0000131-1510915933:140522..140575Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:140522..140575TCONS_00011641-exon-sc0000131-1575043694:140522..140575Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1491911889:146831..147065TCONS_00011641-exon-sc0000131-1491911889:146831..147065Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:146831..147065TCONS_00011641-exon-sc0000131-1510915933:146831..147065Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:146831..147065TCONS_00011641-exon-sc0000131-1575043694:146831..147065Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1491911889:148679..149715TCONS_00011641-exon-sc0000131-1491911889:148679..149715Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1510915933:148679..149715TCONS_00011641-exon-sc0000131-1510915933:148679..149715Clytia hemisphaericaexon
TCONS_00011641-exon-sc0000131-1575043694:148679..149715TCONS_00011641-exon-sc0000131-1575043694:148679..149715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:137417..149715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.320933	0	0	2.28843e-09	0	4.30274e-09	0	0	0.420221	0	0.173212	0	0	0	0	13.8212	20.3823	0.64382	0.139641	13.4688	13.7472	26.5815	39.9914	13.1573	22.3339	1.47047	1.86912	0	0.343367
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011641 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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