TCONS_00011640 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011640
Unique NameTCONS_00011640
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2020

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011640 ID=TCONS_00011640|Name=TCONS_00011640|organism=Clytia hemisphaerica|type=transcript|length=2020bp
ATTTTTAATTAGTATATCTCAGTTAAACGAATTGTTCAAGTGAGACAAAA
GAAAGGTAGCATGATTTAGCAGCACCGCTGAGCCACCTCAAACATTTACA
CGTCACGTATTTGAACGCAAAGGTGGAGAGCTGCTTTGAACCTTATCCAT
TTACCTTATAAGGAAAGAATTATCTTCCACTATAAGAGATTTTAACCATC
TGTATCCACGATTACCTTTCACCGAGCGATTAAAGTAATATATTTTGTAT
TACaatcaaagacattgaaaaGGGTGTGGTATGTCTTCATCTGGTTCTAT
AGAACGTGTCAAGAAAGAGAGTATAAAAGGAAGTGGTACAGAGGAAGTAG
AGTGTCTTTCTAAGCTGAGTTTTTAGTAAAGAGGAGAAGGGAAGAAGTCA
AGATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCAA
GGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACACATT
ACCAAGTTATGATGGACCAATGCCCGAAGAAGATGCACAATATGTTGAAG
AAATGTACCATGATGAATTGAGCTGCAAGGATAAATATTCAAATTGTCCA
ACTTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGTGAAGACGGATTG
GTGTCGGAAAACATGCGGTGATTGCTCACCAGACCCAGCTCCTGCTTATG
TGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCA
ACTTGCTTGGCAGCTCACAATGCAAAACGAGGACtccacagaaacacacc
ctcaATGACTTATGACATGGATCTCGCGAAACGTGCTCAAACCTACGCAG
AATATCTCCTGGAATTCGACGAGTGGAAACACGATGCTTTTCGAACATAC
AATGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATCTTCAGC
AAGTCGAACCTCTACTAATGCTGTTGTCTCATGGTATAACGAAATCAACA
ACTACAATTTTACAACTGGCAAGTCAAACGGTGGAGATATTGGTCATTTC
ACACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAA
AGGAACAGGTGGAACTTATGTCGTTTCCAGATATTTGTCATCTGGTAACA
CCAATATACACAACATGTTCATGGgttgaaatctaaaaaagatgaaaaag
aagacCCCCCTGCTATCGAAGAAGTCTTGTAAAAAAACCTTCTTTTTAAA
ATAACAAGAAATAATCCTGTTCGCTTTTCTCTGGATgtaattcttaaatt
tttgcaagggtttatattttacatttttctttgttACATAAAGTCCATAA
CGTATTTAATATCTAAATTAATCTATATTTGTCACTGATGGCATGTAATA
TTTATTCTTATACATATTTTATCTTCTTAACATAATAAAAACCAGGATAA
TCACGGAATAATTAGTTATTTATTGAAAtactaaaaatatcaaaaattat
atttctattTTCTCAAACCCTACCAGGTTATTCAATTGTTAGAATCCTGT
GTTTAAAGACGATGTCATGCAGAATAATTAACAATCCCAGCATTAAAcaa
cagaagcagccggcggagagatATGCATTCtcatcttctaggagaccacg
TGTTATGACCTTCAATTTcttaattgttcttttttttacgGTAATTCTCT
CTTGATTATACACCTGCCTCCCTAAAAGAtttgttctgaagctttctaga
caacaagaacacctTAGGcgaccttgattatacccctgtctcgtcaaaGC
ACATtgttatttctagctgattaattttcattttaaaaatctgatcagaa
taaatcaaaatttctagctgaaacatactctcagaacacatcggaaaaaa
aggttGCCTCGACGGCTGCTTTCAAAAAAATACCACACTTAATATTTTGC
TTTCATTACTTTGATCATAGAACTTTGAAGCTGGGTTTTTATTTAAACAA
CATGCATCGTCTTTAAagcc
Run BLAST on NCBI

transcript from alignment at sc0000131:137218..149715+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011640 ID=TCONS_00011640|Name=TCONS_00011640|organism=Clytia hemisphaerica|type=transcript|length=12498bp|location=Sequence derived from alignment at sc0000131:137218..149715+ (Clytia hemisphaerica)
ATTTTTAATTAGTATATCTCAGTTAAACGAATTGTTCAAGTGAGACAAAA GAAAGGTAGCATGATTTAGCAGCACCGCTGAGCCACCTCAAACATTTACA CGTCACGTATTTGAACGCAAAGGTGGAGAGCTGCTTTGAACCTTATCCAT TTACCTTATAAGGAAAGAATTATCTTCCACTATAAGAGATTTTAACCATC TGTATCCACGATTACCTTTCACCGAGCGATTAAAGTAATATATTTTGTAT TACaatcaaagacattgaaaaGGGTGTGGTATGTCTTCATCTGGTTCTAT AGAACGTGTCAAGAAAGAGAGTATAAAAGGAAGTGGTACAGAGGAAGTAG AGTGTCTTTCTAAGCTGAGTTTTTAGTAAAGAGGAGAAGGGAAGAAGTCA AGATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCAA GGTGAGTTTTCTTATGTCATTTTGCAATTTCATCGAAACTTTAACTTTTT GAAGCTTCTTTGACCCGAATTTTCCGTGTAACCTGGTTATTGTTTTGGTT AGGATTTTTGCATGAAATTGCCTCCTATTTCGTTGATTTCTGTGTCACTA CTAAAGGTTTaaatgtaaccaacaaaactatggtattttaaacattttct gttaggccaactcttcctgaatctgaaaatttaaaagtcataatgaaaaa ttttgatggagaagaaaatgaagacttatgcgaagaattatatttcaacc tttgaggaccttattttcggcgaagaaaaaacatttcgaaaatttttttg cgttaGAAGGTGTGtctttaaccaaactaaaaagagattttcggaaaatt ttagTAAAAGCTTCTTTGCCTCAAaatcgttttttatttgaaaattttca aatagttcaattctttgcggacaacTTAAAATATGTTCGAACCAAAAAGG TTAAATGACCaataaaacttagcactttttgatGAAGAGGGTAAcataac attttattaacgtctttttaaagttcataaggacatgtttttttttgact gtaccaaaataCCGATTTTCAATCAACCCGGTTCAAATCGGCACTAACAG AGACAGCTGAACCCTTTCTTATCGctattcaaaaataagaaaatatatta gtagctctgtccgatactttttgtccaatcttaatagcttttatggaact taagatatcgcttgttgaatccggagtattccaggatgaaaaaaatcata gtctATTTCGGATTTATAAAGTCGGCTCTATATTTGGCTTTTGTCGTGTC CAATTTATATACGAAACTTATATCAGGGTGTAGCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGTAGCtaaaggat tgaattttcacatcgacctcttttttttggaaaaaaccggaggaaaatgg gatcaaattgatcatttttgaaatctaggtgctaatcctaatcgtatata ttttcctgacaaGTCTATCTATCGAGGaggtgatttgagatttttgttta gttgaaAGAAAGGAACGAACTGAAGAAAAAGGGAATtgttaaaatgagtg aaaaatgattaaaaaagtcgtgatgattgttttgatcataactcactccg acctttaaaaaaattactcctcaggctattttatgattttaggctacctc aggaatgcatagaaacctcctcaggaccgaataatgagtcatggagtgag atatgatccaaaacactccatgattaattaatcctgaaatactccgaatt ttgaaatttcaaatagctcattttaaagcccttctcaaatttcaatacat atcaaaatcttgggaaaattcatcatgcgaatgacgaaataattaaaata aagtgattttcacgattttcgaaaacctaattttggtacagtcaaaaaaa aacatgtccataaCGTCATTATTGTAACTAAATTCTtaaagttcttaatt actcttgacAGGATGAATAATAAACAActtttgtaaaagaaaaatcCCTT AATTTCTTACTATGATCAGAGTCCTTAAGTGTGCCGAAGTTTACCTGTAA GCCACGTATTGTACGCAAACAAGCCAAAGTGATTATGATTTGATTTAAGG TTCATTAACTATGAAGaccgaataaaaaataaacgCGAAAATCGAAGCGT AACTTTCAAAGTTTTCTATTGATTTTTAAAGGTAAACATGTCAAACGTTC ACACCAAGATCACAAAAAGGTCAACACATTACCAAGTAAGTAAAACTTGC CGTTCTTTTACTACTTTTAACGGCTTTTTCATTTTACACCTTCCAAAGTC atcattctttgaaattttcatgagACGCATATTTTTGACACTTGAACCCA TAATGATATACCCATAATTCTTTGCAAGGTTATGATGGACCAATGCCCGA AGAAGATGCACAATATGTTGAAGAAATGTACCATGATGAATTGAGTGAGt ccttttaaatattttgtacaGTAAGATTTTCGTTATGCAAAGCAAACCCT AAAAATCCCgtattttcattctttatttttatcattaCTAGTATTCCCAA AGAGACATTGTATTTTAAGAAAACGAGCGGTATTTTTGAGGTATAACAAC ATTTATACATGTTATATAATCCAAATTCATTGAAAACTGGCAATTTCCCA TTCACATTGCATTTAACATCCTCATTCTGTCTCAATTAGCAAAAGAGTTG TTACagcaccgggtcactgagacagaggGATGTTTTTCTACATTCTGAAC TACAGCTAACCACTTGGTGTCAAGTCTATTCTCTCTCATTTTCTTTGAGC CGATACCAAAATAACGAACGTCTATATTTTAGGCTGCAAGGATAAATATT CAAATTGTCCAACTTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGTG AAGACGGATTGGTGTCGGAAAACATGCGGTGATTGCTCACCAGACCCAGC TCCTGGTAAGATATAATCGAAATCAATATATCAGTAGTAGAACCTCCCTT TAGACTTTTTATAAATCtccaaaataaaatttaaccATCATGCTTTGTTG CAAGGCAGTTGTTTTGAGAACATTCGTTATCGTTAAGACTCAATGTAGAC CAGTTAGACTTAGCTACAAAAATGGGATAAATATTCAATACTTTTTTTTC ATAGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAG CATCAAAGGTAAGACTTCAAGACTTCCAAGTTTTGGAAAGCGAATTTCAA TCCTGAAAGCTGGTAAAAAATTGAATCTCGTTTGAGTGGCgataaatgaa caaaaaattataGTAAAGAAGTTACCAGACATGTTTTATAGCCTGTGATT AAATGTTTGTTAAGCTACAGTTATGTATCGTTTTTCTCTTGTTTATCTAA AAGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGGACtccacagaaac acaccctcaATGACTTATGACATGGATCTCGCGAAACGTGCTCAAACCTA CGCAGAATATCTCCTGGAATTCGACGAGTGGAAACACGATGCTTTTCGAA CATACAATGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATCT TCAGCAAGTCGAACCTCTACTAATGCTGTTGTCTCATGgtaagaaaataa caaaaaatatctCAGTCAAGGTTTTTAATTGGTACGGTGgaattttttcg aaagtttGTCTTTGAGAGGCTTCTGAGGGCTAAGTTTCAAATGTATTTCA AATGCCTTcaacaaagatttattatacactggatatacaagtagcAGATT TTTGTAGATTTCTCGTGtgtagctatgtccgcagtaatgatattattgtt gttcactctccttccctcattaaacgatttttcgaagcatttttattgca tttctttttgaaaatcactcatccaattcccaaaagagacttccTGCGAG AGTCAGATTCTTTCACTTAACTGCTAATTacaagtcgttatgacgtttca agctgtgagaaagatgcaaaagacgtgttgtgtataagaaattgaatgtt gacaccagaaattttcaaacttcaacctatAAAAAAACACCTTGCCACCG CGTGCCTagaaaggattttcataccacagtggagctaagacattcaagtc ttatgtatgttaatttcagctcttctggggacagtcttggaaagatattt ccaattgaaaattgtgtgtcactataagcattttgtctgaatttcttgtc taatgatgattCTCTCACACCAGTTTTCACAAATGTATCAGgcttggtat tctagccttactttcaaactttttttctgcaaatgtacaaaatggaagag ctagagaacttttttttaaataagactgataaacacttttaaaaatcaga catcttcgagccACCATGACAGTTGTCCTTTGCggacaaagctagaacat caattgttttctgaaacaatgaaaatacaatgatcgctctccatcgtttt atgagtcgtttatccagtgtataataaatctttgccTTCAAGTTGTATAT CATTCCAAGCAGAATTCTGAAACCACAGGTATTCTTCTATAAAAGATGTT GTAGAAAGAAAATTAACAAAGTGGATATTTCAACAAGGCTTGAGGCTGCT GTTGGAAATTTCTTATAATTATAGAATTGAATCTGTCTCGACAGTTAAAA ATGAGAAagcctactctcgggtacctaatagccgcccccgcccctgctaa ttaatttttcgaaatttttccacccagggcattcttattccaacctcccc gcttattgattttttggaaaatgtttctaaaagttcccttttttgtccta attctgctgtattagccaccttttcaaaaagttttccacccagcacattt ttattccaacccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGCCATTTCACAC AATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGA ACAGGTGGAACTTACGTCGTTTCCAGATATTTACCCGCTGGTAACACACA AGGCCAGTACACACAACATGTTCATGGGTTAAGCGCGAAAAAAGATCAAC ACGACCAACCTGCTgttaaagaaaaagttttgtGAGCGAGCGACTAACAC TGGTTCCTTGATGTTGTCGATTGACTGAAAGATGGGCTTCgacaattttg atttctaaaatatttctcatagaTTTACGTAAACCCTTATCTCTTGTGCA GTATATATTTTGCTTACAAATCATTCGATTTGTATTGTTTTCTTTATCTA AATATAAACTTCCTAAAAAACATTTGTGTACTAAATTATAAATCTTCGAT CCGATTTTTGGTAATCAAGGTCGTGGGTGTTAAACCCCCAGTCGGGTCAC ACCATACCAAAGACAACAATAAGCAATAAGAAAAGGATTGAGGGCAAATG GAGCAATCCTTCGGATGAATAGTTATCGTAAGATGAGCTTTCGAGTCGTT CCCGGCTACTCTAAGGTCCCAAATAAACATCCCCACCCagttattaattt tcgaaaagttttagggcccccccccccccctttttaatttttcgaaaatt ttttggaCCCCCCCCCTAGCCCcagaaaacccccccccccatttattaat ttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccc catttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaa acccccccccccatttattaatttttgaaaagtttttggacCCCCCCCCT AGCCCcagaaaacccccccccccatttattaatttttgaaaagtttttgg acCCCCCCCCTAGCCCcagaaaacccccccccccatttattaatttttga aaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccccattta ttaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaaccccc ccccccatttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCc agaaaacccccccccccatttattaatttttgaaaagtttttggacCCCC CCCCTAGCCCcagaaaacccccccccccatttattaatttttgaaaagtt tttggacCCCCCCCCTAGCCCcagaaaacccccccccccatttattaatt tttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccct aattataagatttaaaaaaaaattcagtcccgCCTTTTATTCGGAACGTT GCGTTAGATTAGAGTACAGTTGCAAACTTATTTGCTAGAGCTAGCCAGGC AGATAGACATTGACGAGGGAGAGtttaaaaattgatgatgaaGAGCCTTT TATAGCAGATCTTTACAGAAAAAATTTCCTGCAAGAACATATTCGGTACA GAATTCCAAATgtcattgaaaattttatttgaatcgTAAGAAATTAAGGT AGGAGATGACAATCGCTACTTCAACTTAAAATTCGGAGATGCAAGGTCAA AATTCATATTTCGAAATATAGGGTTGCGTGTTTGTGTGTCGAAATATTAG TTTTTGATAATATTAAAAAGTCGGTATCGTTTCTTTAatcattattttta attaataTATCTCGGTTGAATGAAATGGCTCACGTGAAACAAATGAGGGA TAGCATGACCTTCAGTCCTTTACCTTTGAGACACTTCCAAGGGTGGCGAG TACCAGGCTCGAAAAATAATGAAGGAGAACTAACGTTTATTTATATTTCT TTACAAGGCAAACAACGTTCTTCTCCACAGACTCGAATCCTTCTGTATCT CCCCGCTTAATTACCTATGTGCCTTTTCTATGACCTATCTATTAAAGTGC AATCTTCAACATTAAGCAATAATCAATAATAAAAAACCATTGAATACATA CGTGGCATTGAAACAGCGATGCGtgattattgaaatttttaccGCCATCT ATGTCACGTGTCAATTTAAAAGGTATAAAAGAGGAGCAAAGGAGGAGGAA AATTTATCATCTTTGCGTTCTATAAAAACTCAGCATGGAGACTCTAACGT TATTACTAATTGTATTAGTATCAATTTCTCAAGGTAAGAAATTATAATAA CTTTAGAATGAAGTTTAAATCAAAAGATCACCGAAAAGACATTacttttt gtgtcttttgtACTTGTTTTCCGTCCcactaggcttctgctcatcctcta gcgaaaagagtttcttatagcAAGTATATCTGTACCCCCATAGGTTCCAA GTACTAGAAGTTTAGATGGCTCACATACATGGTGTATAATCTAGGTCAAA TTGGCTTTATTTTGATTGTATGCAAGATCAGATATATTAggtctttgaaa aataaacgcGAAAATCGAAGCGTAACTTTCAAAgttttatattgattttc aaAGGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACAC ATTACCAAGTAAGtaaaacttgacttcactgggGAGGGGGGGGGCTCTTC AAATTAGGATATAAACCATTGGAACATGACTGTGAGACGGCTCGAACAGT ACGGCACGATACCCTATATTTAATGACCCtatatttttaagaacatcctt ATATATAGGGAAGTCGTCCTTACATTAACGAGAAACAGAGTATTCTTCAT CAATACTTGAGTTTCATGCTCTTTACAATCATCAGCTTAGGGAATTCCTT ATATTTAAGGACCTTTTTTCCTACTGATCTTCATTTAATCTACTGGGTCG AGGAAATAAAAACGATCTAGTGAGCAGAAGTCCCTATAAATAGGGAGGTC CTTAAATGTAGGGTATCGTGCGGTAGGTTATGATGGACCAATGTCATACA ACTCTTGTCTTGTACTTTATTGCTAAGAAGGTCAAAGTTTAACGAACAAA TACATTCTTATTCAATCAAGGTTACGATGGACCAATGCCCGAAGAAGATG CACAATATGATGAAGAAATGTACCATGACAGTTTAAGTGAgtcttttcaa atattttgtatgGTAAACAATATAAAATTTGACAACTCAATATCCACCTA AAATCCTAATAAATGACGTATTCCCATGAATTCTCCAGCTAAATTCCCGT ATGTTAAATATCGCTAGCGATTATAAGTAAACATTTCAAGAGCAATTAGT GCAAAGGAGGTATGGGATTTCAAGTCGTACAAAGGAATAGATTTGTGCAG ATTTTTTACTAATTTAGAAACCAAAGTGTGCTACTAAGTCAATACACTTT CATCCCACTCAAAAAAATGGCCTCTCTTTGATTATGATGTCTGACTGATA ATTTGTTCTTTTCGgcttaatattttattttctttgagcCGATACTAAAA TAACGAACGTCTATATTTTAGGCTGCAAGGATAAATATTCAAATTGTCCA ACTTCTTTGCGTCGATATTGTGAAAGTCACAGTTTTGTGAAGACGGATTG GTGCCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGGTAAGA TGTAATCGAAATAAAAAACTTCGTGATGACATTGAGTTTAAATCATAGCT AAACTTTGTACCAAGTTCAAGGTTGAAGTCATACCTTAGCAACTATAGAT TAAACATTATTGAAGGTAAAAAACACCCACCGCCTTGATAATACGAACCT CGAAAGCCTCATAATATGATAGGGCTACGGCTTTAGATGATTAATTAGAA TGGAATTGTTAATTTGTAAATAAAGTTGTAAAAGCATGACAGGCTAAGGC CGAAGCTCAAGAACCCATCATCATCGGAATATGCTTGGTTGATAAATCGa ataaatatttaatattttgtttCATAGCTTATGTGACAGCTCAACCGAAA ATTTCAAGCTCAGAGATGGAAAGCATCAAAGGTATGACTATTAACTTTCA CTATCATTAAAGCTTTATTCCTGATCAAAGTACAGAAATTTTTGTGATAT TTGTGATTTACGATGGAAACTTTGTTTAGCTATATTTATCCTTTTTTCTT GTTTATCTAAAAGCAACTTGCTTGGCAGCTCACAATGCGAAACGAGGACT CCACAAAAACACACCCTCAATGACTTATGACATGGAGCTTGCAAAACGAG CTCAAACCTACGCAGAATATCTCCTGGAATTCGACGAGTGGAAACACGAT GCCTTTCGAAAATACAATGGCTACGAATCTGGAGTCGGTGAAAATCTTTA CTGGTCATCTTCAGCAAGTCGAACCTCTACTAATGCTGTTGTCTCATGGT AAGAAAATAACAGAGAAATATCTTATTCAAGATTCTTAACACGTTCACAT CCGAGGTTGAATTTTATCGAATGTTTTAATTTGAGAGAGTTATGTGAAGG CAGGGGGGTACTGTCTCACAGGGGTTCTCGATTCCACCagctttttccaa aatttccgtcaaactatttaaaaagaagcaaaattccgtcaccgaaaatt cctttgaagtttttgtcgaaaattccgcaaatttcgaatatttttgctaa attccgtttatCCACACCCCTTGCCCTCAAATAGCTCTCTCAAACAAAGT AAAACTTTCGATGAAATTCAAGTTCGGTTGTGGACGTGTTAAGACCCTTG TCGAATTCTTTCCGCCTCCGTCAGATGACCCTGTTTCCGAAATTCCGTTT AAATTTTCGTCAAGTTCCACCAATCCGTCCGAAAAAAAGTCTATTCCGCT CCAAGCCACGGACCTCCCTTATGTGTTTGAGTTTCCAATACGTTTACGTC GAATTCCACGTAGATTTTAAAAGGCGTAACAAAAAGAAGGTGAAAATCTA GGTATCAAAAGTGGAATGACCCCTCTACAAAATATACTCTCAGTCctcga gtgacttagggcaagtctcaaaaacctaacagtttaccctaagttttcgc taccaatagcagccagattcagagatccacttagggctctaaagtacctc tataccttaaggtttcagggcccggttgttacgtaattaaatattaacat aaaaattaattattaaagaaattgtaatcatgacgtcataatttgatcga atttggtgacgtcatgaatcgCATAATCGTTATAATATAAAAAGTACATG TCAAATCtttcccaaatttgaaccaaagatgcatctaactgaaatataac tttttgaaaaaaaatttttggaaaaatttgatgacgtcagcaaaaaattg catttttcgattttttgcattttttgctgacgtcatcaaaatcgtcaaaa aatttttcattgaaaagttcggcaccattaagatgcatctttggtccaaa tttgacaaagatttgacatgtacttatagagttagagctaatttacgctt tatgacgtcataatttgatgacgtcacaattcacactttctttaataatt aatttttaggttaatatttaattacgtaacatcGGATCCTGAAACTTTAA GGTATGggtcatctaaaaatccataagtgaatccctgagaatgggtgcta ttggtcgcggattcgggatttgtgattttttaaaaNTTTAAggtataggt catctaaaaatccataagtgaatccctgagaatgggtgctattggtcgcg gattcgggatttgtgattttttaaaatctagacacgccctaactcacccg agtCAGCAGCGtgatttaaattttgaaacatgTATTCATAGATCAtgtga aaaatcttttaaaagtatgaaagatttttaagaaatttttcaacaaagGT TAAAGCTCCGGgaaattatttatttatcatAATTGTTACATATGGTTAAA CCTACAGGCTAAAGAAACTGGAAGGAGAACCATTTTGATTATATTCTGTG GTTAATTTCAGGTATAACGAAATCAACAACTACAATTTTACAACTGGCAA GTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTT CAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTATGTC GTTTCCAGATATTTGTCATCTGGTAACACCAATATACACAACATGTTCAT GGgttgaaatctaaaaaagatgaaaaagaagacCCCCCTGCTATCGAAGA AGTCTTGTAAAAAAACCTTCTTTTTAAAATAACAAGAAATAATCCTGTTC GCTTTTCTCTGGATgtaattcttaaatttttgcaagggtttatattttac atttttctttgttACATAAAGTCCATAACGTATTTAATATCTAAATTAAT CTATATTTGTCACTGATGGCATGTAATATTTATTCTTATACATATTTTAT CTTCTTAACATAATAAAAACCAGGATAATCACGGAATAATTAGTTATTTA TTGAAAtactaaaaatatcaaaaattatatttctattTTCTCAAACCCTA CCAGGTTATTCAATTGTTAGAATCCTGTGTTTAAAGACGATGTCATGCAG AATAATTAACAATCCCAGCATTAAAcaacagaagcagccggcggagagat ATGCATTCtcatcttctaggagaccacgTGTTATGACCTTCAATTTctta attgttcttttttttacgGTAATTCTCTCTTGATTATACACCTGCCTCCC TAAAAGAtttgttctgaagctttctagacaacaagaacacctTAGGcgac cttgattatacccctgtctcgtcaaaGCACATtgttatttctagctgatt aattttcattttaaaaatctgatcagaataaatcaaaatttctagctgaa acatactctcagaacacatcggaaaaaaaggttGCCTCGACGGCTGCTTT CAAAAAAATACCACACTTAATATTTTGCTTTCATTACTTTGATCATAGAA CTTTGAAGCTGGGTTTTTATTTAAACAACATGCATCGTCTTTAAagcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006532XLOC_006532Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011640-exon-sc0000131-1491911889:137218..137668TCONS_00011640-exon-sc0000131-1491911889:137218..137668Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:137218..137668TCONS_00011640-exon-sc0000131-1510915933:137218..137668Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:137218..137668TCONS_00011640-exon-sc0000131-1575043694:137218..137668Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1491911889:139549..139602TCONS_00011640-exon-sc0000131-1491911889:139549..139602Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:139549..139602TCONS_00011640-exon-sc0000131-1510915933:139549..139602Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:139549..139602TCONS_00011640-exon-sc0000131-1575043694:139549..139602Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1491911889:139746..139811TCONS_00011640-exon-sc0000131-1491911889:139746..139811Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:139746..139811TCONS_00011640-exon-sc0000131-1510915933:139746..139811Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:139746..139811TCONS_00011640-exon-sc0000131-1575043694:139746..139811Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1491911889:140200..140322TCONS_00011640-exon-sc0000131-1491911889:140200..140322Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:140200..140322TCONS_00011640-exon-sc0000131-1510915933:140200..140322Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:140200..140322TCONS_00011640-exon-sc0000131-1575043694:140200..140322Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1491911889:140522..140575TCONS_00011640-exon-sc0000131-1491911889:140522..140575Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:140522..140575TCONS_00011640-exon-sc0000131-1510915933:140522..140575Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:140522..140575TCONS_00011640-exon-sc0000131-1575043694:140522..140575Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1491911889:140771..141005TCONS_00011640-exon-sc0000131-1491911889:140771..141005Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:140771..141005TCONS_00011640-exon-sc0000131-1510915933:140771..141005Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:140771..141005TCONS_00011640-exon-sc0000131-1575043694:140771..141005Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1491911889:148679..149715TCONS_00011640-exon-sc0000131-1491911889:148679..149715Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1510915933:148679..149715TCONS_00011640-exon-sc0000131-1510915933:148679..149715Clytia hemisphaericaexon
TCONS_00011640-exon-sc0000131-1575043694:148679..149715TCONS_00011640-exon-sc0000131-1575043694:148679..149715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:137218..149715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0671464 0 0.0649963 0.172543 0 0 0 0.0527647 0.070893 0 0 0.0917296 0.155079 0 0.0619922 10.4305 13.7483 0 0.711829 10.9578 9.5683 17.5087 26.5386 8.47765 11.0938 2.17712 3.23712 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011640 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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