TCONS_00011578 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011578
Unique Name	TCONS_00011578
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1379

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000130:313029..325409-
coding sequence from alignment at sc0000130:313029..325409-

transcript sequence

>TCONS_00011578 ID=TCONS_00011578|Name=TCONS_00011578|organism=Clytia hemisphaerica|type=transcript|length=1379bp
AAAAAGCTAAATAACATACTCGgcgatgaaaaacaaaaacttaagTATGC
ACTGCCTGGATGTTGCAGTGAAGACACCCAAGTCAGAGAGatACAAAACG
ATTTTGCTGACTCGTCGATATTCGCTGCACCAATCAGAAAAGGATCAAGA
TTGTTTCCACCAATCAGACGAAGATGTTCGCCTCCATTTTGAATGTCATC
GCTTTCAAGCAGAAGTCACGTTACGACTACCCATGTGACCAATACACAAG
GCTGTTCATGCCCAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGA
ATTATTTCAATGATCAAATCACATGCGCCATCTCCAATGACGTCAAGATC
TCACCAGACTTCATCCATTCGACATGTTGGATCAACGGATTTTTCATCTA
CAAAGAGATGCATGAGCGAACCAAGTATTCTCATTTTTATGGAATACCTC
AAGATATCGATCGAGATGGGCTCACCAAGGATGGACACTTATGTAGTATG
AAAGATCGGAGAGGGGACGGTAATCCGAATTGCCACACCCGAATGTCCAA
AAGGTACTTTCTTCACTATCAATGGCTACCATTTTACATCTGCTCACTCT
CCGTTCTGTATTATATCCCTTACATCTTTTACAAGATGGTAAACAAAGAC
ATCATTTCATTGGTCAATAATATTCGTGCACAGCAACACGGAGACAAGAT
TGCGCGAAATTATTTTAACTACCGTGTCAATTCGAAAGTGAAAATCCATT
TCATTGTGACCATGAACTTCTTTGTCAAGGTCGGATATGTGGCTACCAAC
TTGATTGGTTTCTTCCTGACAAACGCCATCTTGGAAGGCCGTTACTATGA
CTACGGTTACCGTTGGTTACAGTGGAATATTTTACCGAACAAAATCGCAT
ATGATATGAAGGAGAGAGATTTCCCGAAGCCTGGGAACTACTTGTTACCA
CCTGTTGGGATTTGTGAATTGTTGGCCGCTATTCGTGATAACAGAGGAAC
ACATGTTAACGACCACAAGTTTGTTTGCGAGATCTCGCAGAACGTGATGT
ACCAATATATTCTGTTGGTTGTCTGGTATTTCCTGACAGCAGGGATTATT
ATTTCCATCACATCATTCGTGCACTTGTTCTCTACGTACGTCCGCGCGGT
CTTCTGGATGCATAACCCATCTAATTGTCGTGAGACCATGCATGGAAAAA
TTCAATCCTTGCTCACACTGAGAGAAATCGAGTATTTGGACATCATCAAA
ACAACAAATATGGCGCTTTATGGGGATGTGCTGAGAGAGCTGACCAAGGC
ACGACCTGATTTGTTCGCGCTCACTAAATACTTCGACAACGAATCTTCTT
ACATGGCAAGGAGGGTGTGAATAAGGAGG

Run BLAST on NCBI

protein sequence of TCONS_00011578-protein

>TCONS_00011578-protein ID=TCONS_00011578-protein|Name=TCONS_00011578-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
MFASILNVIAFKQKSRYDYPCDQYTRLFMPKLFFAASIIMTWNYFNDQIT
CAISNDVKISPDFIHSTCWINGFFIYKEMHERTKYSHFYGIPQDIDRDGL
TKDGHLCSMKDRRGDGNPNCHTRMSKRYFLHYQWLPFYICSLSVLYYIPY
IFYKMVNKDIISLVNNIRAQQHGDKIARNYFNYRVNSKVKIHFIVTMNFF
VKVGYVATNLIGFFLTNAILEGRYYDYGYRWLQWNILPNKIAYDMKERDF
PKPGNYLLPPVGICELLAAIRDNRGTHVNDHKFVCEISQNVMYQYILLVV
WYFLTAGIIISITSFVHLFSTYVRAVFWMHNPSNCRETMHGKIQSLLTLR
EIEYLDIIKTTNMALYGDVLRELTKARPDLFALTKYFDNESSYMARRV

Run BLAST on NCBI

transcript from alignment at sc0000130:313029..325409-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011578 ID=TCONS_00011578|Name=TCONS_00011578|organism=Clytia hemisphaerica|type=transcript|length=12381bp|location=Sequence derived from alignment at sc0000130:313029..325409- (Clytia hemisphaerica)
AAAAAGCTAAATAACATACTCGGCGATGAAAAACAAAAACTTAAGTATGC
ACTGCCTGGATGTTGCAGTGAAGACACCCAAGTCAGAGAGGTATTTTTTA
TCATATAAATTTACTTGACTTAACTCTCAAAAAATTTGTTTACTCGTTTT
TTATTGAATCATTAAACCATTTTTTGGACGATTTAAGCTTGGTTTTACCA
GTCTTATTGAGAACTACTTTAAGGGAACAAATTTTCACGGGAAGAAAATT
TCGTGGAACAAATTTCGCTGAATTTAATTTTGCGGTCTGTTGCGGTCTTT
CGACAAATCCGCGAAATTAAATTCCGCGAAACACGAATATTCTCTTGATT
TAAAAAATCACCTATAAAATTTGTCTTTTTAGGGCAAAAAAGGCCATATT
TTAAACAAAAAATCCTCCCCACTGCGAAATTAAATTCCGCGAAAATTACT
TCCCCTAAGGTATTTCATTGATTTTTTATTTTAATTTTAACGCCATAGGC
TAACATAGATATTAGCATGGCTTGGGGTTTTGGTACTTTTATCACAGTCA
AAAATTATGTGACATTTAGCAACCCAAAATTGGTCTTTTTGGTAATTCTG
GGAAAAAAAAGAAAATATAATATGATATAAATAACTAAACTTAAACTTTT
TGAGATATGGATCCTAGCACGGTGCTATCTCAAATTTTTGGACGATTTCA
TGGGATATTTTTTGAGGTAACCTTGCAATCACAGGAATAAACGGTTGTCT
TTTGGGAATTGAATAAGTGCTCTTTGATGAGGAACTGCCAATAAAAATAC
TACGAAAAATCATTTAATGGTGGAAGGAGGGTGAACAATGATGTCATTAC
TGCGGACAAGGCTTGAACATGGGAGATCGGCAAAAATCTGCCAGTTATTT
TTCCAGTGTCTATAATAATTCCTTGGTTTTAGTGAGCAAAAGTCGGAAAA
TTAAAAAAAGACATTCTTTCATTTTTAGATACAAAACGATTTTGCTGACT
CGTCGATATTCGCTGCACCAATCAGAAAAGGATCAAGATTGTTTCCACCA
ATCAGACGAAGATGTTCGCCTCCATTTTGAATGTCATCGCTTTCAAGCAG
AAGTCACGTTACGACTACCCATGTGACCAATACACAAGGCTGTTCATGCC
CAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGAATTATTTCAATG
ATCAAATCACATGCGCCATCTCCAATGACGTCAAGGTACACGCTCTTTTT
TTATAATAACTCACCACTGAACCTTCCAGATTCATGGATATATTCAACGA
CAAAAAGAATTATATTTTGATTTGAAATTGAAGTCAAGCTTTCATCACCG
TAATAATAAAAAGCCGACAAAAATAAGAAGGGTTTGTGGTAGGAAAACAA
TATCTAATTCTTGTAGTTTGTCGAACAGAAATTGTCTCGCATGGAAATAT
ATAGAGCAGTGCAGAAAAAAGTCCTGAGTTAGTTCGACAACCACAAAAAG
GGTCTAAAATATTACGAAAACCATACATAAATTTGTGCTCGTTGAGATGA
CTAAACCCTACCCGAAGTCGATTTAAAAAGACTACCCCTTGATTGTCAGA
AACATCAAAAACACGAGATTGTTTGGGTCTCAAAAATTTAAAAATTGCAA
TCTTAAAGGTCTTAACAGAATGTAAATTTCTTATATTCACGCCTAGGACA
TTCCACTGGGATATGCAACGAGGAAAAAAAGTATTACGAAAACGCTCAAT
TCGTATATTAAGAGGATAAATTACTCTAGGGGCTGAGTTAGGTCTCGTAT
GCGCATCGGCGTATAGTCATTTTTTCTTTTGATCATGAAAGTATAGTCCT
TGAAGAGTCAGAAAACGTTATTTGGATCAGGCACAAATTTCCATAATGAC
GGATTTTAGATTTTCAACCCTTTTTAGCCCTCTTGCTTGAAAAAATATTT
TTTTGACTTTAAACATAGACATATTATATACCAATCGATCTCAAATTTTA
TGCTGATTAAGAAAAAGGTCAGAATCATGGTCTGAAAATTTCGTTATCTC
GAGCTATGAAGTACTTTCGTTTTCAAAACTTAGAAAACGTAAGTACTCAG
AAGTACTTCATAGCTCGAGATAACGAAATTTTTCTTTATCAGCATAAAAT
TTCTGATCGATTGGTATATAATATGCAGGGTTTTAAGCTCAAAAAAATAT
CTTTCTTAGGCTAGCAGAGCCTAAGAGCCCATGTGACGAAAGAAAATTTT
GAATCCGCCATTATGGATTTCGAAATTCATGTAGAAAAAAAACTTTTCCT
GAATTTTATTATTTGAACGGTTGGCAAGACCCTCCGAAAATTTCAAGTAA
ATTAAGTAAGCCAATCAAATGTTACAGCCACGCAAATCTGGAACCAAAAG
TAGTCATTTCAAAAAATCGAAATCGAAAGTACTTCATAGCTCGAGATAAC
GAAATTTTCAGACCATGATTCTGACCTTTTTCTTAATCAGCATAAGATTT
GTGATCGATTGGTATATAATATGTCTATGTTTAAAGTAAAAAAAACACAC
GTTTTCTGACTCTTCAAGGACTATACTTTCATGATCAAAAGAAAAAATGA
CTATACGCCGATGTGCATACGAGACCTAACTCAGCCCCTAGAGTAAATAG
GATTTCTTGTTCTTATGTTAACTAGTGGATGTTAAAGGTTTTGTTTTAAA
TAAGAGTAATATCGTTTGCTTCCTCATCAATTTTAACCTTTTTCACATTG
GATTGACACGGACGTGGAGCAAGATTGGTAAGAAAGAGGAAAAGAAAAAC
ATATTTTTGCTTATATCAGCATAATATAACAGTAGGAAGACACTGTCCTG
ATATGAAATATGTGTCTGATATGAAACGAGAACACTTATGTAAAAATAAA
AGCTGTATTGAGAGAAATGTTATTGGAAAGATGCGTGTGTGTAAAAATCT
CCATCTCTTCATCAAAATACTTTGTGTTACAAATAGGACCAGAGAGTGTT
GTTTATCCGCTTATCTTGAGTATGCCAGAGTTGATAATGCTTTTCCCAAA
AAATAAGTTTTTGTTTATAGCCTTGTGAATATTTTCTTCATAAGAAAGAA
AAAAGTTCCAACATTACAATCATTATTAAGACATGTCTTTTTCAGCTCCG
TCTGCTTCGCGTTGTTAATTTTATTCACCCCTTTTTCGACAATTTTCGCT
CATTCTGAAAAATTAAATTTTACTTTGAAAAGCGATTACTCAAAAACTAC
CAAACCAAATTTAAAAAGTCACAGCTCAAAATTTAAAGTTAGGCCTTCCT
CTTTCTGATGAAATTAAATTCAAGTTCATATCTTGATCTCTTCTGCTCAA
ATGACAACATATTATTCCTTACAATCTCATTGAACTTTCTCTTTCAGATC
TCACCAGACTTCATCCATTCGACATGTTGGATCAACGGATTTTTCATCTA
CAAAGAGATGCATGAGCGAACCAAGTATTCTCATTTTTATGGAATACCTC
AAGATATCGATCGAGATGGGCTCACCAAGGATGGTAAGGTTCTGTCCCCT
TTCTAAAAACAGCAAAATTAGTCTACGTAAACTCTTTTTGATTCTAAAGC
ATACAGGAATTTCGGGCTGAGGCTCATTATGCGTAGCAAAATTTCAATTT
CAGCCTCAAATTATACTTAGTGTATATATGCTTACGAAAGTTCTTTTCAA
AACATTGTCTCTTTTGGCTAACTTCCATAATTGATTATATTCTCACGTTT
TGTGTTATAGATCATAACACCCCTGTCTAGTTTATCCCATTTTGAGCCTT
GGTATGCTTATAAACGTTATGAAAAGGGATACACTCGAAACCTGTTTGCT
TTTAGGATAAGTACATGAAATCTTTTCAACCATTTGACTTTCAGCTGCTC
TCGCTAACCTGCTATAACCACTGAAACCATTTCATCCTTTTTCAGGACAC
TTATGTAGTATGAAAGATCGGAGAGGGGACGGTAATCCGAATTGCCACAC
CCGAATGTCCAAAAGGTAACCTTTCACAAAGCCTCATTCTTGCTTACCAT
CCAAACAAAGAAACTTTTACAAATGTTATTAAGAGCTTTACATCCTTCCT
CTAAATTTTCTAAAAAAACAGCGAATTGATCTTATCGGAGTTTTTGATTT
TTCTAAAAAAGCGATGCATTGTGGGATTGTTTTGGGAATATTACAATAGA
AATCTCTTAGAAATTCCTCGAGTGAACTCTATTGTAATACTCCCGAAACA
ATCCCACAAAGCATCGCTTTTTAGAAAAATCAAAAGCTCCGATAAGATCT
ATTGATCTTAATCTGTATATTGCTTTCTAACTAAATAACATCTGGATGAC
TTAATGATTTGACCGAATATCCGATGTTACCAATATTCTCTTCTTCGCAG
GTACTTTCTTCACTATCAATGGCTACCATTTTACATCTGCTCACTCTCCG
TTCTGTATTATATCCCTTACATCTTTTACAAGATGGTAAACAAAGACATC
ATTTCATTGGTCAATAATATTCGTGCACAGCAACACGGAGACAAGATTGC
GCGAAATTATTTTAACTACCGTGTCAATTCGAAAGTGAAAATCCATTTCA
TTGTGACCATGAACTTCTTTGTCAAGGTAAACAAGCTTTTGATGAATTGA
CCTTATCGGAGCTTTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTG
TTTCGGGAGTATTACAATAGAAATTCTATTAAGGAATTCTATTAATTAAT
ACTCCCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAAAATCAAAA
ACTCCGATAAGATCTATTCAGGTATTTCTATGATTTCTCCTGGGCTTCTA
ATTATCTGAACCCTTTTAATTTCCTTAGCTTTCTTAAACGGTAACTCGAT
GTCCTTCAGGATTTTTAACAATGCATACTACTAGAAAGTTCTGCACGTTT
TTTCATAAGAATCGGAATTTTGGTTGTCCTTATTTGTTTTCAAGCTTAAT
TTTTCATAAATATTTTTCTTAATCTGTTTTATTCATTTATTAGGTCAAAA
GTGGTTTATGGGGCTGGGATCGTTCCTAATGTTTATAGGTTTTGACCAAA
GTTAGCCTCATGTTCTCAACAAAAATCATTGCAAAATAACGTCTAAATAG
AAACATGATAAAATTTACTTTCAGGTCGGATATGTGGCTACCAACTTGAT
TGGTTTCTTCCTGACAAACGCCATCTTGGAAGGCCGTTACTATGACTACG
GTTACCGTTGGTTACAGTGGAATATTTTACCGAACAAAATCGCATATGAT
ATGAAGGAGAGAGATTTCCCGAAGCCTGGGAACTACTTGTTACCACCTGT
TGGGATTTGTGAATTGTTGGCCGCTATTCGTGATAACAGAGGAACACATG
TTAACGAGTGAGTAAATGAATGAATTAAGGGCTCTGACCATAGTGAATTT
TTCATAATTGAAGTGTTTAAACTGTGTTTTCTGACTGATGTAACCAACAG
AACCATGACATGTTATACATTTTATGTTTGGCAAACTATTCCTGAATCTG
AAAATTCAAAAATTGCATTGAAAAAATTGATAAAGAAGAAAATGAAGACA
TTTCAACTTCGAGGAGCTTATTTTCGGCGAAGTAAAAAGATTTTTAAAAC
ATTTTTGCACTAGATGGTGTATCTTTAACAAAACTAACAATAGATTTTCG
AAAAAATTTTGTGAAAGCTTCTTTTTCTCAAAATCTTGAAAATAGTGTGC
AACTGGTGGGTGGGGGCGCCATTTAAAAAAGATTGACTTCGGTCCCTTCA
GAAAAATTTTCCCACAAAGGGGAAGTCTACAATCTATGGTGGACTGAAAA
ACACTTCGGAAAATACTTCACTAATACACGTATTCAAGTAATGTTACATT
TGTCACGAATGATGACATGTGGCTTTCCCTATCTACTTCGTGCTATACAA
AGCGTAACAAGTGACGACTTACACATTTCATACTACACTTCCATGACTAT
TTGAAACATAACCTAACTTTATTATGAATGCGTGTAATACTATCATACTA
AACTTACACATCACCCTCTACCATGATAACACAATACAAAGTACACACCA
TAATAAGACAATGTATACAATGTACCCCTCAGGTAATGGTAATTGCAGTA
ATTTCGGTAATCACGGTAATCACGCCCTTACGCCACAACATATCGCCCTT
TATAACGCCACACCATAATAAGACAATGGATACAATGTAACCCTCAGGCA
ATGGTAATTACAGTAATTTCGGTAATCACGGTAATCACGCCCTTACGCCA
CAATATATTGCCCTTTATAGCGCCACACCATAATAAGACAATGTATACAA
TATACCCCTCAGGTAATGGTAATTGCAGTAATTTCGGTAATCACGGTAAT
CACGCCCTTACGCCACAATATATCGCCCTTTATAGCGCCACACCATAATA
AGACAATGTATACAATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTAATTGCAGTAATTTCGGTAATCACGGTAATCACG
CCCTTACGCCACAATATATCGCCCTTTATAGCGCCACACCATAATAAGAC
AATGTATACAATGTATCCCTCAGGTAATGGTAATTGCAGTAATTTCGGTA
ATCACGGTAATCACGCCCTTACGCCACAATATATCGCCCTTATAGCGCCA
CACCATAATACAAAGGACCAAAAGCATATTCAATGATGTATCTATTTAAT
GATCCAAGTGTTAAAGAAATTTAAAGCCTGGAGGCTGTTTTAATAATTGT
GTGATGAATTATTGAAAGTCTGCGACGCTCCCTCCGCCCTCTGGATTATT
TATATTCACGAATTGTGCCATGGCTAGATGTCCAAGTGGATTCTTGTATC
ACTTCAGATCCACTTATATCTGACAAATGCAGTGAGGAAAATATACTAGG
ATGATCTATTACATTGAAAATATGGTTTTTGTTGTGAATACAGTTAAAAC
ACAAATTTAATTTAAATTGACTAAATCAAAGTTGACGTGGACTTTGGCGC
AAAATTTATAGATTGGTGCATCACGTGAAAGTGATAATTTGGAATTTCTG
GACTATTTTGCTCCAGATGGCAATCCAATACCATGTTTGAAGAAATGCAG
GAACGATAATTTGTTATGAAGCTTCCAAGAAAAAAAAAGCTCTGTAAATT
AAAGGACTCTAACTGCAGAAATGGCTTTTGGGGGCGCTATAAGGGCGATA
TGTTGTGGCGTAAGAAGGGTGTGATTACCGTGATTACCAAAATTACTGCA
ATTACCATTGCCTGAGGGGTACATTGTATACTTTCTCTTATTGTGGCGTT
ATAAAGGGCGATATATTGTGGCGTAAGGGTGTGATTACAGTGATTACCAA
AATTACTGTAATTACCATTGCCTGAGGGGTACATTGTATACATTGTCTTA
TTATGGTGTGGCGCTATAAAGGGAGATATATTGTGGCGTAAGGGTGTGTG
GCGCTATAAGAGCGATATGTTGTGGCGTAAGGGCGTGATTACCGTGATTA
CCAAAATTACTGTAATTACCATTGCCTGAGGGGTACATTGTATATTTTAT
TTTATTTATTAAAGGATTTACAGTCCAGGCACACTAGGGCCTCTAAACCG
GTCTATCTACATAATGATCAGGTATACATTGTCTTATTATGGTGTGGCGC
TATAAAGGGCGATATATTGTGGCGTAAGGGCGTGATTACCGTGATTACCG
AAATTACTGCAATTACCAATTGCCTGAGGGGTACATTGTATACTAACTTT
GTATTGTGTTATCATGGTAGAGGGTGATGTGTAAGTTTAGTATGATAGTA
TTACACGCATTCATAATAAAGTTAGGTTTCCCTTGCTTTTTGTGATTGAT
ATCTGTTTTCCCCCAGAAAGTTCCATCTGTTTCCAATTCAATATCATCTT
TTTTGGAAACAGATATCTGTTTCCCAATTTATTATGTCATCTCCTAGAAA
TATTGATCTGTTTCTCTCTAATGACGTCGTCAGCTGGATCGGGGAAACAG
ATAGTTTTAAAGAAAAGGTCTTTCCTAGAAAATCGGATCTGTTTCCCCAT
TTTTCAAAAAAAGCTCTCTCCTGGAAAAGGGAAACAGAAATTTCAGGAAA
ATGGGCTCGTTGGCTGCCTCTGGAAGTAGATAGGGAAAGCCACATGTCAT
CATTCGTGACAAATGTAACATTACTTGAATACGTGTATTAGTGAAGTATT
TTTTGAAGTGTTTTTCAGTCCACCATAGATTGTAAAATTGCCCCACAACG
CCACTGTTCATAACGTCATTTTTTTAATTTAATTGCTAATTGCTCTTGAT
AGAATAAATTCAGAAACAACTTATAAAGACAGTTTTTTGTTAAAAGTGTC
AAGGAACGCAAAACAAATGTTTTATCTCCAAATCTGCGTAACCGATCTTT
TGACTATGGTCAGGACCGAACATAACACTGATTGATTAGGATGTTCGGAT
GTTCAAACTCTCTCATTCGGGTACATAGCTAGGGAGTCCTCGACAGTGAT
TTCAAAACTTATTCACAAATATCTCCACACGGCTTAGGGTAGAAAACATA
TAACTTTTCAAATTTTCGCGCATCTGAAAATATCTTCTCCTCTTTAACGA
GGGCATATACGGCGTATAGTTACTATCAAAAAATTCAGGTACATATCGGA
TGGGTGAATTGACTTTTTAAGCAGCAATTTCAGCCGTTCTAGGGAGTAGA
TGAATGATTCTTGAGCAACGTTAGAACTAAAAACAAATGTAAAGTTTATT
TTGATCAATACTTAAAATATGAGCTTGGCCATCCGACATTGAGCAAACAC
TCTAAACTTTACGAAAAATGTTTGTTTCAGGCTCGCCGGTTCAAAAATTT
TACGATTTTATAAGAACAATGAGGCTCAAAATCTCAAAAAAATAAGAAAA
TTAAAGAACAATGTTGTGCCTGAAATCGCTCAATTTCAAGCAATTTAGGG
GTAAAAGTAATAAAAATTGGGTATAACGCCTAAAATACCTCAATTGCATC
ATGTAAATAAGAACAGGATAAGAACAAGTTGAGACTCAAAGTTACAAATA
AACAAGAACAGCCGAGCCTCAGCAAAATTATGCTGGTTCTTATAAAGAAA
AGTATAATGAAGGATCAAGCTGGCAGCGTAGCCTTTCCTACGTAATTTTG
TGTACTTTGTCCTCATCTCGACGATCCATCTAAAACTTCAATGAACGAGC
GCTCTAACTTAGGTTGGAAGGGTACAATTTTAAGTCTGAGTTTTAACATT
AGACTTAGAGGACCTGAGGATCCAAAAGTTCAAGAATGGTTCAATAGGGC
TCAGAATAATAGCCTGGAAGTCTATGAACCCCTCCCTAATTGAAATATTG
TCGATCAAATTTAACAAATACGGACTTTCTCGCCCGAACTTTAAATTGCT
AAAAACGAGGAATTAACCAAAATTCTCAACATATTTTGACCGAGATTGTA
GAGGACGTGGATCACTTCATTTTAATTAACTTTTTGCTACCTTTTCAAAG
TCTATCTAATTGACTGGTGTCTGGCCTCCAGGTCGACTTTGACGTCGGAT
GGTCAAAAATGCAACAAATTTCACAACATATCTTCTTTCTTTATTTCGTC
TTGAAATTTTCTCTCATCTTTTTCTTTATTTTTCCAGCCACAAGTTTGTT
TGCGAGATCTCGCAGAACGTGATGTACCAATATATTCTGTTGGTTGTCTG
GTATTTCCTGACAGCAGGGATTATTATTTCCATCACATCATTCGTGCACT
TGTTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCATAACCCATCTAAT
TGTCGTGAGACCATGCATGGAAAAATTCAATCCTTGCTCACACTTAGAGA
AATCGAGTATTTGGACATCATCAAAACAACAAATATGGCGCTTTATGGGG
ATGTGCTGAGAGAGCTGACCAAGGCACGACCTGATTTGTTCGCGCTCACT
AAATACTTCGACAACGAATCTTCTTACATGGCAAGGAGGGTGTGAATAAG
GAGACGTTTTGGATCTATCGACAACAATACACATTTTCTTATAAGGAGCC
TTAATATGGCTCTAAGCCTGAAGTTCCTTATTTTTCCAGAGAATTTCAGC
CTTAAAGTTCTTTATCTAGCTCCTTATTTACTTGGCTGCTAATATTGGAT
TTACTAAGTATGTGACCTATGTTTACATAAAGATAAAAGAATCGGTGTAT
TTCTTCTCAATACTTTACTTGCTTACGCATTCATCAGTTGATTAGAAATA
ACAATGTATAACAATGGACTAAAAGACGTTTATTGAATGTTGTTCGTCAA
TATTTTGTCATCTTTTTGTTTAGGCTTTGGTAAATGTGATCAGTTCACGG
TTTTTTTCTNCGGATCTGTTTCCCCATTTTTCAAAAAAAGCTCTCTCCTG
GAAAAGGGAAACAGAAATTTCAGGAAAATGGGCTCGTTGGCTGCCTCTGG
AAGTAGATAGGGAAAGCCACATGTCATCATTCGTGACAAATGTAACATTA
CTTGAATACGTGTATTAGTGAAGTATTTTTTGAAGTGTTTTTCAGTCCAC
CATAGATTGTAAAATTGCCCCACAACGCCACTGTTCATAACGTCATTTTT
TTAATTTAATTGCTAATTGCTCTTGATAGAATAAATTCAGAAACAACTTA
TAAAGACAGTTTTTTGTTAAAAGTGTCAAGGAACGCAAAACAAATGTTTT
ATCTCCAAATCTGCGTAACCGATCTTTTGACTATGGTCAGGACCGAACAT
AACACTGATTGATTAGGATGTTCGGATGTTCAAACTCTCTCATTCGGGTA
CATAGCTAGGGAGTCCTCGACAGTGATTTCAAAACTTATTCACAAATATC
TCCACACGGCTTAGGGTAGAAAACATATAACTTTTCAAATTTTCGCGCAT
CTGAAAATATCTTCTCCTCTTTAACGAGGGCATATACGGCGTATAGTTAC
TATCAAAAAATTCAGGTACATATCGGATGGGTGAATTGACTTTTTAAGCA
GCAATTTCAGCCGTTCTAGGGAGTAGATGAATGATTCTTGAGCAACGTTA
GAACTAAAAACAAATGTAAAGTTTATTTTGATCAATACTTAAAATATGAG
CTTGGCCATCCGACATTGAGCAAACACTCTAAACTTTACGAAAAATGTTT
GTTTCAGGCTCGCCGGTTCAAAAATTTTACGATTTTATAAGAACAATGAG
GCTCAAAATCTCAAAAAAATAAGAAAATTAAAGAACAATGTTGTGCCTGA
AATCGCTCAATTTCAAGCAATTTAGGGGTAAAAGTAATAAAAATTGGGTA
TAACGCCTAAAATACCTCAATTGCATCATGTAAATAAGAACAGGATAAGA
ACAAGTTGAGACTCAAAGTTACAAATAAACAAGAACAGCCGAGCCTCAGC
AAAATTATGCTGGTTCTTATAAAGAAAAGTATAATGAAGGATCAAGCTGG
CAGCGTAGCCTTTCCTACGTAATTTTGTGTACTTTGTCCTCATCTCGACG
ATCCATCTAAAACTTCAATGAACGAGCGCTCTAACTTAGGTTGGAAGGGT
ACAATTTTAAGTCTGAGTTTTAACATTAGACTTAGAGGACCTGAGGATCC
AAAAGTTCAAGAATGGTTCAATAGGGCTCAGAATAATAGCCTGGAAGTCT
ATGAACCCCTCCCTAATTGAAATATTGTCGATCAAATTTAACAAATACGG
ACTTTCTCGCCCGAACTTTAAATTGCTAAAAACGAGGAATTAACCAAAAT
TCTCAACATATTTTGACCGAGATTGTAGAGGACGTGGATCACTTCATTTT
AATTAACTTTTTGCTACCTTTTCAAAGTCTATCTAATTGACTGGTGTCTG
GCCTCCAGGTCGACTTTGACGTCGGATGGTCAAAAATGCAACAAATTTCA
CAACATATCTTCTTTCTTTATTTCGTCTTGAAATTTTCTCTCATCTTTTT
CTTTATTTTTCCAGCCACAAGTTTGTTTGCGAGATCTCGCAGAACGTGAT
GTACCAATATATTCTGTTGGTTGTCTGGTATTTCCTGACAGCAGGGATTA
TTATTTCCATCACATCATTCGTGCACTTGTTCTCTACGTACGTCCGCGCG
GTCTTCTGGATGCATAACCCATCTAATTGTCGTGAGACCATGCATGGAAA
AATTCAATCCTTGCTCACACTGAGAGAAATCGAGTATTTGGACATCATCA
AAACAACAAATATGGCGCTTTATGGGGATGTGCTGAGAGAGCTGACCAAG
GCACGACCTGATTTGTTCGCGCTCACTAAATACTTCGACAACGAATCTTC
TTACATGGCAAGGAGGGTGTGAATAAGGAGG

Coding sequence (CDS) from alignment at sc0000130:313029..325409-

>TCONS_00011578 ID=TCONS_00011578|Name=TCONS_00011578|organism=Clytia hemisphaerica|type=CDS|length=7182bp|location=Sequence derived from alignment at sc0000130:313029..325409- (Clytia hemisphaerica)
CCACAAGTTTGTTTGCGAGATCTCGCAGAACGTGATGTACCAATATATTC
TGTTGGTTGTCTGGTATTTCCTGACAGCAGGGATTATTATTTCCATCACA
TCATTCGTGCACTTGTTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCA
TAACCCATCTAATTGTCGTGAGACCATGCATGGAAAAATTCAATCCTTGC
TCACACTGAGAGAAATCGAGTATTTGGACATCATCAAAACAACAAATATG
GCGCTTTATGGGGATGTGCTGAGAGAGCTGACCAAGGCACGACCTGATTT
GTTCGCGCTCACTAAATACTTCGACAACGAATCTTCTTACATGGCAAGGA
GGGTGTGAGTCGGATATGTGGCTACCAACTTGATTGGTTTCTTCCTGACA
AACGCCATCTTGGAAGGCCGTTACTATGACTACGGTTACCGTTGGTTACA
GTGGAATATTTTACCGAACAAAATCGCATATGATATGAAGGAGAGAGATT
TCCCGAAGCCTGGGAACTACTTGTTACCACCTGTTGGGATTTGTGAATTG
TTGGCCGCTATTCGTGATAACAGAGGAACACATGTTAACGAGTACTTTCT
TCACTATCAATGGCTACCATTTTACATCTGCTCACTCTCCGTTCTGTATT
ATATCCCTTACATCTTTTACAAGATGGTAAACAAAGACATCATTTCATTG
GTCAATAATATTCGTGCACAGCAACACGGAGACAAGATTGCGCGAAATTA
TTTTAACTACCGTGTCAATTCGAAAGTGAAAATCCATTTCATTGTGACCA
TGAACTTCTTTGTCAAGGACACTTATGTAGTATGAAAGATCGGAGAGGGG
ACGGTAATCCGAATTGCCACACCCGAATGTCCAAAAGATCTCACCAGACT
TCATCCATTCGACATGTTGGATCAACGGATTTTTCATCTACAAAGAGATG
CATGAGCGAACCAAGTATTCTCATTTTTATGGAATACCTCAAGATATCGA
TCGAGATGGGCTCACCAAGGATGATGTTCGCCTCCATTTTGAATGTCATC
GCTTTCAAGCAGAAGTCACGTTACGACTACCCATGTGACCAATACACAAG
GCTGTTCATGCCCAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGA
ATTATTTCAATGATCAAATCACATGCGCCATCTCCAATGACGTCAAGCCA
CAAGTTTGTTTGCGAGATCTCGCAGAACGTGATGTACCAATATATTCTGT
TGGTTGTCTGGTATTTCCTGACAGCAGGGATTATTATTTCCATCACATCA
TTCGTGCACTTGTTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCATAA
CCCATCTAATTGTCGTGAGACCATGCATGGAAAAATTCAATCCTTGCTCA
CACTGAGAGAAATCGAGTATTTGGACATCATCAAAACAACAAATATGGCG
CTTTATGGGGATGTGCTGAGAGAGCTGACCAAGGCACGACCTGATTTGTT
CGCGCTCACTAAATACTTCGACAACGAATCTTCTTACATGGCAAGGAGGG
TGTGAGTCGGATATGTGGCTACCAACTTGATTGGTTTCTTCCTGACAAAC
GCCATCTTGGAAGGCCGTTACTATGACTACGGTTACCGTTGGTTACAGTG
GAATATTTTACCGAACAAAATCGCATATGATATGAAGGAGAGAGATTTCC
CGAAGCCTGGGAACTACTTGTTACCACCTGTTGGGATTTGTGAATTGTTG
GCCGCTATTCGTGATAACAGAGGAACACATGTTAACGAGTACTTTCTTCA
CTATCAATGGCTACCATTTTACATCTGCTCACTCTCCGTTCTGTATTATA
TCCCTTACATCTTTTACAAGATGGTAAACAAAGACATCATTTCATTGGTC
AATAATATTCGTGCACAGCAACACGGAGACAAGATTGCGCGAAATTATTT
TAACTACCGTGTCAATTCGAAAGTGAAAATCCATTTCATTGTGACCATGA
ACTTCTTTGTCAAGGACACTTATGTAGTATGAAAGATCGGAGAGGGGACG
GTAATCCGAATTGCCACACCCGAATGTCCAAAAGATCTCACCAGACTTCA
TCCATTCGACATGTTGGATCAACGGATTTTTCATCTACAAAGAGATGCAT
GAGCGAACCAAGTATTCTCATTTTTATGGAATACCTCAAGATATCGATCG
AGATGGGCTCACCAAGGATGATGTTCGCCTCCATTTTGAATGTCATCGCT
TTCAAGCAGAAGTCACGTTACGACTACCCATGTGACCAATACACAAGGCT
GTTCATGCCCAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGAATT
ATTTCAATGATCAAATCACATGCGCCATCTCCAATGACGTCAAGCCACAA
GTTTGTTTGCGAGATCTCGCAGAACGTGATGTACCAATATATTCTGTTGG
TTGTCTGGTATTTCCTGACAGCAGGGATTATTATTTCCATCACATCATTC
GTGCACTTGTTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCATAACCC
ATCTAATTGTCGTGAGACCATGCATGGAAAAATTCAATCCTTGCTCACAC
TGAGAGAAATCGAGTATTTGGACATCATCAAAACAACAAATATGGCGCTT
TATGGGGATGTGCTGAGAGAGCTGACCAAGGCACGACCTGATTTGTTCGC
GCTCACTAAATACTTCGACAACGAATCTTCTTACATGGCAAGGAGGGTGT
GAGTCGGATATGTGGCTACCAACTTGATTGGTTTCTTCCTGACAAACGCC
ATCTTGGAAGGCCGTTACTATGACTACGGTTACCGTTGGTTACAGTGGAA
TATTTTACCGAACAAAATCGCATATGATATGAAGGAGAGAGATTTCCCGA
AGCCTGGGAACTACTTGTTACCACCTGTTGGGATTTGTGAATTGTTGGCC
GCTATTCGTGATAACAGAGGAACACATGTTAACGAGTACTTTCTTCACTA
TCAATGGCTACCATTTTACATCTGCTCACTCTCCGTTCTGTATTATATCC
CTTACATCTTTTACAAGATGGTAAACAAAGACATCATTTCATTGGTCAAT
AATATTCGTGCACAGCAACACGGAGACAAGATTGCGCGAAATTATTTTAA
CTACCGTGTCAATTCGAAAGTGAAAATCCATTTCATTGTGACCATGAACT
TCTTTGTCAAGGACACTTATGTAGTATGAAAGATCGGAGAGGGGACGGTA
ATCCGAATTGCCACACCCGAATGTCCAAAAGATCTCACCAGACTTCATCC
ATTCGACATGTTGGATCAACGGATTTTTCATCTACAAAGAGATGCATGAG
CGAACCAAGTATTCTCATTTTTATGGAATACCTCAAGATATCGATCGAGA
TGGGCTCACCAAGGATGATGTTCGCCTCCATTTTGAATGTCATCGCTTTC
AAGCAGAAGTCACGTTACGACTACCCATGTGACCAATACACAAGGCTGTT
CATGCCCAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGAATTATT
TCAATGATCAAATCACATGCGCCATCTCCAATGACGTCAAGCCACAAGTT
TGTTTGCGAGATCTCGCAGAACGTGATGTACCAATATATTCTGTTGGTTG
TCTGGTATTTCCTGACAGCAGGGATTATTATTTCCATCACATCATTCGTG
CACTTGTTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCATAACCCATC
TAATTGTCGTGAGACCATGCATGGAAAAATTCAATCCTTGCTCACACTGA
GAGAAATCGAGTATTTGGACATCATCAAAACAACAAATATGGCGCTTTAT
GGGGATGTGCTGAGAGAGCTGACCAAGGCACGACCTGATTTGTTCGCGCT
CACTAAATACTTCGACAACGAATCTTCTTACATGGCAAGGAGGGTGTGAG
TCGGATATGTGGCTACCAACTTGATTGGTTTCTTCCTGACAAACGCCATC
TTGGAAGGCCGTTACTATGACTACGGTTACCGTTGGTTACAGTGGAATAT
TTTACCGAACAAAATCGCATATGATATGAAGGAGAGAGATTTCCCGAAGC
CTGGGAACTACTTGTTACCACCTGTTGGGATTTGTGAATTGTTGGCCGCT
ATTCGTGATAACAGAGGAACACATGTTAACGAGTACTTTCTTCACTATCA
ATGGCTACCATTTTACATCTGCTCACTCTCCGTTCTGTATTATATCCCTT
ACATCTTTTACAAGATGGTAAACAAAGACATCATTTCATTGGTCAATAAT
ATTCGTGCACAGCAACACGGAGACAAGATTGCGCGAAATTATTTTAACTA
CCGTGTCAATTCGAAAGTGAAAATCCATTTCATTGTGACCATGAACTTCT
TTGTCAAGGACACTTATGTAGTATGAAAGATCGGAGAGGGGACGGTAATC
CGAATTGCCACACCCGAATGTCCAAAAGATCTCACCAGACTTCATCCATT
CGACATGTTGGATCAACGGATTTTTCATCTACAAAGAGATGCATGAGCGA
ACCAAGTATTCTCATTTTTATGGAATACCTCAAGATATCGATCGAGATGG
GCTCACCAAGGATGATGTTCGCCTCCATTTTGAATGTCATCGCTTTCAAG
CAGAAGTCACGTTACGACTACCCATGTGACCAATACACAAGGCTGTTCAT
GCCCAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGAATTATTTCA
ATGATCAAATCACATGCGCCATCTCCAATGACGTCAAGCCACAAGTTTGT
TTGCGAGATCTCGCAGAACGTGATGTACCAATATATTCTGTTGGTTGTCT
GGTATTTCCTGACAGCAGGGATTATTATTTCCATCACATCATTCGTGCAC
TTGTTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCATAACCCATCTAA
TTGTCGTGAGACCATGCATGGAAAAATTCAATCCTTGCTCACACTGAGAG
AAATCGAGTATTTGGACATCATCAAAACAACAAATATGGCGCTTTATGGG
GATGTGCTGAGAGAGCTGACCAAGGCACGACCTGATTTGTTCGCGCTCAC
TAAATACTTCGACAACGAATCTTCTTACATGGCAAGGAGGGTGTGAGTCG
GATATGTGGCTACCAACTTGATTGGTTTCTTCCTGACAAACGCCATCTTG
GAAGGCCGTTACTATGACTACGGTTACCGTTGGTTACAGTGGAATATTTT
ACCGAACAAAATCGCATATGATATGAAGGAGAGAGATTTCCCGAAGCCTG
GGAACTACTTGTTACCACCTGTTGGGATTTGTGAATTGTTGGCCGCTATT
CGTGATAACAGAGGAACACATGTTAACGAGTACTTTCTTCACTATCAATG
GCTACCATTTTACATCTGCTCACTCTCCGTTCTGTATTATATCCCTTACA
TCTTTTACAAGATGGTAAACAAAGACATCATTTCATTGGTCAATAATATT
CGTGCACAGCAACACGGAGACAAGATTGCGCGAAATTATTTTAACTACCG
TGTCAATTCGAAAGTGAAAATCCATTTCATTGTGACCATGAACTTCTTTG
TCAAGGACACTTATGTAGTATGAAAGATCGGAGAGGGGACGGTAATCCGA
ATTGCCACACCCGAATGTCCAAAAGATCTCACCAGACTTCATCCATTCGA
CATGTTGGATCAACGGATTTTTCATCTACAAAGAGATGCATGAGCGAACC
AAGTATTCTCATTTTTATGGAATACCTCAAGATATCGATCGAGATGGGCT
CACCAAGGATGATGTTCGCCTCCATTTTGAATGTCATCGCTTTCAAGCAG
AAGTCACGTTACGACTACCCATGTGACCAATACACAAGGCTGTTCATGCC
CAAACTCTTTTTTGCCGCTTCCATCATTATGACGTGGAATTATTTCAATG
ATCAAATCACATGCGCCATCTCCAATGACGTCAAGCCACAAGTTTGTTTG
CGAGATCTCGCAGAACGTGATGTACCAATATATTCTGTTGGTTGTCTGGT
ATTTCCTGACAGCAGGGATTATTATTTCCATCACATCATTCGTGCACTTG
TTCTCTACGTACGTCCGCGCGGTCTTCTGGATGCATAACCCATCTAATTG
TCGTGAGACCATGCATGGAAAAATTCAATCCTTGCTCACACTGAGAGAAA
TCGAGTATTTGGACATCATCAAAACAACAAATATGGCGCTTTATGGGGAT
GTGCTGAGAGAGCTGACCAAGGCACGACCTGATTTGTTCGCGCTCACTAA
ATACTTCGACAACGAATCTTCTTACATGGCAAGGAGGGTGTGAGTCGGAT
ATGTGGCTACCAACTTGATTGGTTTCTTCCTGACAAACGCCATCTTGGAA
GGCCGTTACTATGACTACGGTTACCGTTGGTTACAGTGGAATATTTTACC
GAACAAAATCGCATATGATATGAAGGAGAGAGATTTCCCGAAGCCTGGGA
ACTACTTGTTACCACCTGTTGGGATTTGTGAATTGTTGGCCGCTATTCGT
GATAACAGAGGAACACATGTTAACGAGTACTTTCTTCACTATCAATGGCT
ACCATTTTACATCTGCTCACTCTCCGTTCTGTATTATATCCCTTACATCT
TTTACAAGATGGTAAACAAAGACATCATTTCATTGGTCAATAATATTCGT
GCACAGCAACACGGAGACAAGATTGCGCGAAATTATTTTAACTACCGTGT
CAATTCGAAAGTGAAAATCCATTTCATTGTGACCATGAACTTCTTTGTCA
AGGACACTTATGTAGTATGAAAGATCGGAGAGGGGACGGTAATCCGAATT
GCCACACCCGAATGTCCAAAAGATCTCACCAGACTTCATCCATTCGACAT
GTTGGATCAACGGATTTTTCATCTACAAAGAGATGCATGAGCGAACCAAG
TATTCTCATTTTTATGGAATACCTCAAGATATCGATCGAGATGGGCTCAC
CAAGGATGATGTTCGCCTCCATTTTGAATGTCATCGCTTTCAAGCAGAAG
TCACGTTACGACTACCCATGTGACCAATACACAAGGCTGTTCATGCCCAA
ACTCTTTTTTGCCGCTTCCATCATTATGACGTGGAATTATTTCAATGATC
AAATCACATGCGCCATCTCCAATGACGTCAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006487	XLOC_006487	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00011578-protein	TCONS_00011578-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000130	supercontig	sc0000130:313029..325409 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.786019	0.0691816	0	0	0.807952	0.312641	4.79815	4.30385	2.52952	1.52576	0.562859	1.52757	1.11527e-08	0.64603	0.94372	0.556629	0.804561	2.20501	0.0754151	0.438495	2.3085	1.86564	2.1137	2.44425	5.68184	3.40842	0.804567	1.30949	0.375931	0.3504

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000990	Innexin

Vocabulary: **Cellular Component**
Term	Definition
GO:0005921	gap junction

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005921	gap junction

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00011578 vs. Swiss-Prot (Human)

BLAST of TCONS_00011578 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00011578 (transcript) - C. hemisphaerica