TCONS_00011558 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011558
Unique NameTCONS_00011558
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1865

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011558 ID=TCONS_00011558|Name=TCONS_00011558|organism=Clytia hemisphaerica|type=transcript|length=1865bp
aagaaaattgtacaaaatcagatttaatttttgtttgaaatttctttatt
tagttcagaaaaagatcaaaaatatgaaaatattgaagatgCCATTGAAC
TTCAAATATATCTGGACATCAAGCTACTTTGGTATTTGGAGAGATGAGAA
TACAATGGAGGTCTTAACAATTTCTCGCGAGATGTTTTCGTTTCCACCAC
GCATGTGCTATCTTCTGGGCGATCTTGTGAAATGCGCTCACGTTTATTGA
TGTACAGGCTAGCTTCGGTTGGTTGGTACGGAACACCGGCTAATTTGCAG
TTCTCAGCGATGCGTGCACGGTTTGACATATCTATCTTCCATGCTGGAGT
GTACAGTTTTGGAATGACTGGATGGACTTTGAAGACGATGGGGCCACTAC
CTTACGGGCCCGTGACCCGCCACGTCAACGCGTCAAATGGGCCGGATAAC
GAACGCGCAAAATTTTACGCCACAGAGTATTCAGTTAGCCATGGTAAATC
TGGCTTCGTAGCGCGACCAGGGAAACACACAGGGACTGGGTATCAAAGCA
ACTTTCGACCTGGCTTATTTTACAGCAGACGGCTCGATGAAATTGACAAC
CCTAAACTTGGAGATGAATTATTGAAGAATTACTCATCGAGCAACTCTTT
CCAATTCCGTAAATCTGCTGGTCCAAACGGGACCGACCAACTGCCCGGAA
AACTTCACATGGCCAAGAACTCTTTCGTTCGTGATCTCCATCCAACGCTA
CCTTGCTCACGACAGATCGGGGAAACGTTGAAAATCAATGCCACCAATAA
GTTCAATAAATCGCCAGCATCGCTTTTAAAACTACGGAGCAATGTAAGAT
CTGGGTTACTTGAAGACCATCCAAAAGCTTCTCTTGCTACAGAGAATACA
ACAGAGTTTGAAGATCGTATCCACGAGCAAACACAACTCACATCTAAACC
AGACATTGGTCCCAAATGTGAATCAGGCTTCACCAATTCTTTAAGCAAGG
AGCCAATCACATACCGGGAAGATGAATGTTATGGAACGCAGAATGTCTGT
CGAAGACCAACAGGTATTTCAAATATGCGAAACTCATTCCAACCTTTACA
CAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGCGAGCCGCTA
ATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAGTATGCGCTA
CATAGACTAGATACCTACACTAAAGCGAACGATCTACAACCTACCATGCT
ACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACGTCTTGTATG
CAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGCCATCCGAAA
CCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGAAGAAACCGG
TTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAACAGGGCAAT
CTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGTAACAAGAAT
TTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGCGTTGATGGA
AAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGCCCATTGGGA
AACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTTGTTCGAAGC
AATGCATCACGGGATCCATCATATGTTAATTAAAGCATTGATTGAAATGA
TTTACTTAGGGAAAGAAAGTtgattaaaaatttaaacaaaaacaatgcTT
TGATAAATTCTTAAACTTAATGCTAAAATCGGCAAGATGTGACACTGGTT
CAGGATCCCTTATTcgttttttttggacctacctggaggtcctataaatt
aacctttgtccgtcc
Run BLAST on NCBI

protein sequence of TCONS_00011558-protein

>TCONS_00011558-protein ID=TCONS_00011558-protein|Name=TCONS_00011558-protein|organism=Clytia hemisphaerica|type=polypeptide|length=483bp
MRSRLLMYRLASVGWYGTPANLQFSAMRARFDISIFHAGVYSFGMTGWTL
KTMGPLPYGPVTRHVNASNGPDNERAKFYATEYSVSHGKSGFVARPGKHT
GTGYQSNFRPGLFYSRRLDEIDNPKLGDELLKNYSSSNSFQFRKSAGPNG
TDQLPGKLHMAKNSFVRDLHPTLPCSRQIGETLKINATNKFNKSPASLLK
LRSNVRSGLLEDHPKASLATENTTEFEDRIHEQTQLTSKPDIGPKCESGF
TNSLSKEPITYREDECYGTQNVCRRPTGISNMRNSFQPLHSADGKEEYIL
LSQRAANVNGYTKSMKPRAEYALHRLDTYTKANDLQPTMLRRLQKNDKGE
FFNVLYAAPFPSMNSASYTRHPKPNSGPEKRRIGPKEETGFTENNCKFIP
TLETGQSLKRFDTHYKARFCNKNLKPVPFTANPGKTALMEKGNGFSKSTR
VHSPIGKRIDFTLPTMHPYVVRSNASRDPSYVN
Run BLAST on NCBI

transcript from alignment at sc0000130:535796..538365+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011558 ID=TCONS_00011558|Name=TCONS_00011558|organism=Clytia hemisphaerica|type=transcript|length=2570bp|location=Sequence derived from alignment at sc0000130:535796..538365+ (Clytia hemisphaerica)
aagaaaattgtacaaaatcagatttaatttttgtttgaaatttctttatt
tagttcagaaaaagatcaaaaatatgaaaatattgaagatgCCATTGAAC
TTCAAATATATCTGGACATCAAGCTACTTTGGTATTTGGAGAGATGAGAA
TACAATGGAGGTCTTAACAATTTCTCGCGAGATGTTTTCGTTTCCACCAC
GCATGTGCTATCTTCTGGGCGATCTTGTGAAATGCGCTCACGTTTATTGA
TGTACAGGCTAGCTTCGGTTGGTTGGTACGGAACACCGGCTAATTTGCAG
TTCTCAGCGATGCGTGCACGGTTTGACATATCTATCTTCCATGCTGGAGT
GTACAGTTTTGGAATGACTGGATGGTAAGCAGAGAATTTGGATGTTTTAT
CCTCCATGTTGGTGTGTTGTACGTTGTCCAAAAGAATTGAGTTTGCAGGT
TGGatttctttttggttttgttagttatttttgacgtcaaattttcttta
aataaaatattttgacgtcaattcttCAAGCTATTTTGAATACAAGACAT
CAGTTTTTTGAACGGAACTGTGAAATCTCGCTGTTAGACTCTATAATTTT
AGGACTTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCA
CGTCAACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCA
CAGAGTATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGG
AAACACACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTA
CAGCAGACGGCTCGATGAAATTGACAACCCTAAACTTGGGTAAGATAACA
TTTcctaattattttcaaactttttgcaTCACTTGGCAATTTTATCTACT
TATTTGCTATCTTGTATAGATATTTCAATAGTCCattagaaactttaatt
ttcaaaaaattaaaagtcttATTCTAGAGTTAGAATTGGGATAGGGAGTT
TTCTTGAGAGAGAAATATGCTTGCTAGTATGCTGAACTCTTCATCATTTT
AGAGATGAATTATTGAAGAATTACTCATCGAGCAACTCTTTCCAATTCCG
TAAATCTGCTGGTCCAAACGGGACCGACCAACTGCCCGGAAAACTTCACA
TGGCCAAGAACTCTTTCGTTCGTGATCTCCATCCAACGCTACCTTGCTCA
CGACAGATCGGGGAAACGTTGAAAATCAATGCCACCAATAAGTTCAATAA
ATCGCCAGCATCGCTTTTAAAACTACGGAGCAATGTAAGATCTGGGTTAC
TTGAAGACCATCCAAAAGCTTCTCTTGCTACAGAGAATACAACAGAGTTT
GAAGATCGTATCCACGAGCAAACACAACTCACATCTAAACCAGACATTGG
TCCCAAATGTGAATCAGGCTTCACCAATTCTTTAAGCAAGGAGCCAATCA
CATACCGGGAAGATGAATGTTATGGAACGCAGAATGTCTGTCGAAGACCA
ACAGGTTCTTTTCACATAAATTCTACTCTTTCCACATTGAAATCAAGTGA
AACAGTCGCTCTATAGTTATCTTCTACTTTGCCATAAGAGCCAGTGAAAC
TCAAACATTTTAGGTACTTTCGCATGATTATGAGTTTTGTCCACTCTACT
TAGTTAAGTCGCTGAGTCCAGTAATTCATAACCTCTCAAAAAGGCGCGGC
AatccttctttaaagattttttgatatAAATTTCGGTTTTAACAACTCTA
AACCTTTCCTCCTTTCAGGTATTTCAAATATGCGAAACTCATTCCAACCT
TTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGCGAGC
CGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAGTATG
CGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTACAACCTACC
ATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACGTCTT
GTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGCCATC
CGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGAAGAA
ACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAACAGG
GCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGTAACA
AGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGCGTTG
ATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGCCCAT
TGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTTGTTC
GAAGCAATGCATCACGGGATCCATCATATGTTAATTAAAGCATTGATTGA
AATGATTTACTTAGGGAAAGAAAGTtgattaaaaatttaaacaaaaacaa
tgcTTTGATAAATTCTTAAACTTAATGCTAAAATCGGCAAGATGTGACAC
TGGTTCAGGATCCCTTATTcgttttttttggacctacctggaggtcctat
aaattaacctttgtccgtcc

Coding sequence (CDS) from alignment at sc0000130:535796..538365+

>TCONS_00011558 ID=TCONS_00011558|Name=TCONS_00011558|organism=Clytia hemisphaerica|type=CDS|length=5808bp|location=Sequence derived from alignment at sc0000130:535796..538365+ (Clytia hemisphaerica)
ATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTGGTACGG
AACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTGACATAT
CTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGGACTTTG
AAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCAACGC
GTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAGTATT
CAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACACACA
GGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCAGACG
GCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAGAATT
ACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAACGGG
ACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCGTTCG
TGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACGTTGA
AAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTTAAAA
CTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAGCTTC
TCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAGCAAA
CACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGGCTTC
ACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAATGTTA
TGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATGCGAA
ACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACATACTG
TTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGAAACC
ACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCGAACG
ATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAA
TTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTGCATC
CTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCG
GACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCG
ACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACAAGGC
ACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTG
GCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGT
GTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAATGCA
CCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTTAATT
AAATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTGGTAC
GGAACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTGACAT
ATCTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGGACTT
TGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCAAC
GCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAGTA
TTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACACA
CAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCAGA
CGGCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAGAA
TTACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAACG
GGACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCGTT
CGTGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACGTT
GAAAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTTAA
AACTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAGCT
TCTCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAGCA
AACACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGGCT
TCACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAATGT
TATGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATGCG
AAACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACATAC
TGTTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGAAA
CCACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCGAA
CGATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGGTG
AATTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTGCA
TCCTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGAAT
CGGACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCATCC
CGACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACAAG
GCACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAATCC
TGGCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCACAC
GTGTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAATG
CACCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTTAA
TTAAATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTGGT
ACGGAACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTGAC
ATATCTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGGAC
TTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCA
ACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAG
TATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACA
CACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCA
GACGGCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAG
AATTACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAA
CGGGACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCG
TTCGTGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACG
TTGAAAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTT
AAAACTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAG
CTTCTCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAG
CAAACACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGG
CTTCACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAAT
GTTATGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATG
CGAAACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACAT
ACTGTTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGA
AACCACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCG
AACGATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGG
TGAATTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTG
CATCCTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGA
ATCGGACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCAT
CCCGACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACA
AGGCACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAAT
CCTGGCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCAC
ACGTGTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAA
TGCACCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTT
AATTAAATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTG
GTACGGAACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTG
ACATATCTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGG
ACTTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGT
CAACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAG
AGTATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAA
CACACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAG
CAGACGGCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGA
AGAATTACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCA
AACGGGACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTT
CGTTCGTGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAA
CGTTGAAAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTT
TTAAAACTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAA
AGCTTCTCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACG
AGCAAACACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCA
GGCTTCACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGA
ATGTTATGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATA
TGCGAAACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATAC
ATACTGTTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCAT
GAAACCACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAG
CGAACGATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAA
GGTGAATTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAG
TGCATCCTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAA
GAATCGGACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTC
ATCCCGACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTA
CAAGGCACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAA
ATCCTGGCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGC
ACACGTGTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCAC
AATGCACCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATG
TTAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006478XLOC_006478Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011558-exon-sc0000130-1491911889:535796..536169TCONS_00011558-exon-sc0000130-1491911889:535796..536169Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1510915933:535796..536169TCONS_00011558-exon-sc0000130-1510915933:535796..536169Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1575043694:535796..536169TCONS_00011558-exon-sc0000130-1575043694:535796..536169Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1491911889:536398..536634TCONS_00011558-exon-sc0000130-1491911889:536398..536634Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1510915933:536398..536634TCONS_00011558-exon-sc0000130-1510915933:536398..536634Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1575043694:536398..536634TCONS_00011558-exon-sc0000130-1575043694:536398..536634Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1491911889:536848..537299TCONS_00011558-exon-sc0000130-1491911889:536848..537299Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1510915933:536848..537299TCONS_00011558-exon-sc0000130-1510915933:536848..537299Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1575043694:536848..537299TCONS_00011558-exon-sc0000130-1575043694:536848..537299Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1491911889:537564..538365TCONS_00011558-exon-sc0000130-1491911889:537564..538365Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1510915933:537564..538365TCONS_00011558-exon-sc0000130-1510915933:537564..538365Clytia hemisphaericaexon
TCONS_00011558-exon-sc0000130-1575043694:537564..538365TCONS_00011558-exon-sc0000130-1575043694:537564..538365Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011558-proteinTCONS_00011558-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:535796..538365 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.389017	0.376422	0.220317	0	0.866493	1.22404	0.443365	1.09611	0.424659	0.508584	3.20322e-10	0.11354	0	0.31182	0.231314	0	0.406313	0.0020198	0.644056	0.52568	0.374531	0.36382	0.762318	0.176062	0.146052	1.78806	0.270554	0	0.286317	0.436971
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR031410PPP1R32
Blast
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BLAST of TCONS_00011558 vs. Swiss-Prot (Human)
Match: PPR32 (Protein phosphatase 1 regulatory subunit 32 OS=Homo sapiens GN=PPP1R32 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.494e-17
Identity = 63/222 (28.38%), Postives = 101/222 (45.50%), Query Frame = 1 
Query:  388 MGPLPYGPVTRHVNASNGPDNERAKFYATEYSVSHGKSGFVARPGKHTGTGYQSNFRPGLFYSRRLDEIDNPKLGDELLKNYSSSNSFQFRKSAGPNGTDQLPGKLHMAKNSFVRDLHPTLPCSRQIGETLKINATNKFNKSPASLLKLRSNVRSGLLEDHPKASLATEN--------TTEFEDRI----HEQTQLTSKPDIGPKCESGFTNSLSKEPITYR 1017
            MG LP G V+ +V  S+G   +  KFYAT Y  ++G+  F  R G H GTGY+SNF+P +     L+ +DNP  G++   ++ S  S  +R    P+G   LP  +    + + R+     P ++   E  K++   +    P ++  L       L +   +  L  EN        T+E+  +      +Q     K  IG K  SGFT    + PI ++
Sbjct:    2 MGKLPLGVVSPYVKMSSGGYTDPLKFYATSYCTAYGREDFKPRVGSHVGTGYKSNFQPVVSCQASLEALDNPARGEQAQDHFQSVASQSYRPLEVPDGKHPLPWSMRQTSSGYGREKPSAGPPTK---EVRKVHFDTQ-EHGPQAITGLEPREVPLLHQQQGQDPLERENFRHGPRFMTSEYNSKYLRDPLDQPDFLQKKSIGAKEGSGFTKQSHQSPIVFQ 219
The following BLAST results are available for this feature:
BLAST of TCONS_00011558 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPR324.494e-1728.38Protein phosphatase 1 regulatory subunit 32 OS=Hom... [more]
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