TCONS_00011557 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011557
Unique NameTCONS_00011557
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2113

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011557 ID=TCONS_00011557|Name=TCONS_00011557|organism=Clytia hemisphaerica|type=transcript|length=2113bp
AAGATCATTCATCCTCCTGCCTAATGAGATGAACTATTTTTCAACCTTCC
AGCTTGAGATTTCCCTTCAATCGAAGAATTTGTGATcttaaaaaaaacaa
agcataACAATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAA
TGAAAGCTATGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAAT
ATTCAAGTCGTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGT
GAGGGAACTGGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAG
AAAACTTGATGAGCTAGATAATCCTACAATGGGgAAAATTGTTGACAAGA
ATTACAAATCGTTGACTCATAAAGATTACCAACCATCAAGAGGACACAGT
GGAAAAGAACCTTTGCCCCTCTCTACTCAAACTGCTTCAACAGGGTTCTC
TAAAGAACATCAAACAGTCCCAACTGAGCGAGAAGCTTATGCTATGTTTC
CTAATCTGGCCATGTCAAGCTACAAAGAGAAAACACCTCTACTTCACACT
TTAAAAAACAAAGATCCCATAGCAGCTGAAAATGCCAGAAGCGGCCCTGC
ATATAGTTCAACAGAAAGCCATACACAATTTACAAAGAAACATTCTCATA
TAGAGACTGATGATAAAATCACAGGACCTCTTGAGAACACAGGCTTTACA
CGTGCCAAGAACCCTGAACCAGTCACCCACTACCCTGAAGCAAACCACAA
AAGTGTGCAACCAACATTAAAATCCTACTTGAATCCGATTGTACCGAGTA
TCATGAAGACTTCGTATCAACCACACCAACACAGTGATGGACGTGAAAGA
TTGAGTGGCATTTCAAAACATGCAAACCCTGATACCGGATTCACAAGATT
CATCCAGCCTACAGGTGCTCACACTGCTGCTAAAGGGAAAGTTTACACCA
CACTGGGAGAAGTTGACAACCCGTTCACGGTGGAGCGAACCAAGAAATCA
GATCCTGCTGAATATCTCAATATGACAAACCCACATCCTTATCCGAGTTT
GAGTAAATCAATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATG
AAAAACTCGGTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACG
GacaacaacaaaagtttttggtCGACACCCAATGATTCTGAACAGTACAA
AACTGTCTATAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCG
AGCGTTCTCGTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGG
TTCACAAAGAGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGG
GAGCCAATTGAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCAC
GTGACCCATTTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTg
cttttagcttgaaaatttcaagtcagaTATTCGGAGTTAATGAAAGAGTT
TTATGCTTAGGGTTGTCAGGATATGTCAGCATTTATTCGAATTCGTACTA
GAAAAAGTTGGGtcgattttcaatttcatgtaTCTGATTTAGAGTAACTC
GAttgtttttattacaaatttCAGTTACTACTCATTCTTCAGGATTGGAA
TGAAAACTTTGACCCTTAATATTTGAATATTGCGGAAACTTACCCGGCCT
AGATATGACCAAAACTCTTCGGAATTCGAGAAATTATGGATTGTTTATCG
CGTTTCCTTCGGTCctatttttttcgtttttgatttttattgattttata
aagGAATGAGGAATgaggtttttgaatttttttttatggaaataattttt
tgaatgattttatttttgtacatagcaaatttatttttataatttaactg
taaaattttgaaggggctgaaaaatattattctctactttaggcgtacaa
actttcgcgagcagaaactttcacaaggtcgaaaaatcgcgaaattcacg
acatttactttcgcgtaTCATCCTGTTAAGAAAATTCAAAgacattaact
ttcgcgaaaaaggccaagtttctgctcgcgaaagtttgttcTTCATCAGA
ACCAGTAATTCTT
Run BLAST on NCBI

protein sequence of TCONS_00011557-protein

>TCONS_00011557-protein ID=TCONS_00011557-protein|Name=TCONS_00011557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
MSRQQIGKPNKHVNESYGAGNNIMKFYITEYSSRLGIDDFTPQKGSCEGT
GYKSNFRPGVYYTRKLDELDNPTMGKIVDKNYKSLTHKDYQPSRGHSGKE
PLPLSTQTASTGFSKEHQTVPTEREAYAMFPNLAMSSYKEKTPLLHTLKN
KDPIAAENARSGPAYSSTESHTQFTKKHSHIETDDKITGPLENTGFTRAK
NPEPVTHYPEANHKSVQPTLKSYLNPIVPSIMKTSYQPHQHSDGRERLSG
ISKHANPDTGFTRFIQPTGAHTAAKGKVYTTLGEVDNPFTVERTKKSDPA
EYLNMTNPHPYPSLSKSIYNGQQTNEPALNEKLGNVSIGRKENTGHTDNN
KSFWSTPNDSEQYKTVYNDTFFDKNRIPETERSRINDDCTRDLQGDGFTK
SEKLHPALGSYDEGSQLRFLHPYVNRSIKARDPFYGETKYAHKSRPLLLA
Run BLAST on NCBI

transcript from alignment at sc0000130:529367..535626+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011557 ID=TCONS_00011557|Name=TCONS_00011557|organism=Clytia hemisphaerica|type=transcript|length=6260bp|location=Sequence derived from alignment at sc0000130:529367..535626+ (Clytia hemisphaerica)
AAGATCATTCATCCTCCTGCCTAATGAGATGAACTATTTTTCAACCTTCC
AGCTTGAGATTTCCCTTCAATCGAAGAATTTGTGATGCAAGTATAAAGTT
TTttaatcatttcaatttttcatcaacAGGGAATGCGCCCATGAAGCTTG
AAACCATCATGGTAGCATCTTTTTCATTTCTGTAATTTTTACGTAGAATT
TGCAAGATTAGGCTTCATTTTCTTAATGCAAATACAATACTAGACCTAGA
ACTAGAATCTACATGCTCGTTTTTGGATTATGATGTCGGTTTATAATGAC
Ataggtttgaagatgtgatttatatagcaaattttcgcttgggatagaag
ttactacgtgcacacaatatagcaaaactgcttcgctcataaattcgctt
cgcaaaaatcttcaataatGCCAAAGCAAAGtcgcaaaaatgaaaaaaaa
aactatgcGTGTTTTAATCCCTATTGGGCCACAATCACAAAAACTTGCAT
TTATAGCTAGTAAGGTATATACCATCAaccagttagccacactagcgtcc
cgccaaaatgcgtatcaaagattaatgctgcgaaagcgctatatcgttta
cttgactctcaagcaaaaaaatgcaccgcaaaacttctaaaggaaaaaat
gaaaaaataacccggtgctttttaatgaaattaacattttcaaaaacttt
gagaaattgcctaaaatttgagccatagatgaaaaaaattgagccaagcc
aaccttgaaaactaatttgaagatcaacttaccaagaaaaagatctacgg
gggaggcggaacccacctagatccgcgcactgccggataagctatctccc
ggaaattttgccggacctcaaacaatgacccatttacatgtgcataATTG
TTTTatctttagcgtataaacaaggccttaaaaattgaagcgctgtctcg
ggaattgaatgacaaattttggttggttgatttttgctgctgcacgtttt
attttgtttccaactttcaagttttaattaatattgtcttgcgaacttga
ttcaggtaactctcatccttgttgttgaaatgtatcctgtagatgactga
tgttgttttttctgaaagctagatttcctagtgtgactaactgtcaactg
ctctaacttgggacgattggtcaaaacatgggactggttgatatctggcc
tgtatgttcacttactgttaaatctcttaaAATtgacaacaatttttttt
gataactccaccaggtttatcaatcatacttcttcgttcctcttagagtg
cacagacactcccagacgatctcaatcgaacggaatcgacgatcgaacca
gtcgaaacaaatcgaatgcaatcgaccgattgaaattcgattgtcgaacg
caaaagaggtgcaaaagagaaatcgtgtattttttgatacgccgttcatt
aactgaaatcaaatgactttggggGTTTGgtgaattgccgtcccatgaaA
TAATCATTTCAATAAATATTCCAGGAGATAatagtatttcaaatttttgc
tgacgtcaacaacagcaaaaagtgttttgctttaaatttcccaaaatagc
tgaaacagaatttttggcccagggctttttggaaaggtattaatatgaag
agtgaaaataacgaaaaattttcccataaaAAGGGGTGGAACAACTGGCC
GTCACGATTTATCAAATCTTTTGCACAGGCCGTAACTTGCATGAGTAATC
AAATGCAATCAAATAATCAAACAATCGAACGGCCAATTCCtaggtaatat
tcaattgtgttTGATTGCATTCAAGTAGGGTTAGATTGTTTcaattgata
gttgactatgttcgattgattgtcaattacattagattaatctttgattt
cgttcgattacgattatgttcgatgagtttgattgcgattaaattaaatt
agatCACTTacgttagagctttttagcatGGGCAGTCAAGCGCTTAAGTA
CCGTAAGAAAGCAAAtaaaatcaatcgaacgtaatcaaacataatcaaat
acaatcagtatagacttaaacttgtatatcaagattacaggatttcgagt
acgggctgattttactttcgttttgagtggtttaattttcaatttcaagc
taacatattagcaacggggtgctcgcccatagttacaggggtttgtgcaa
aaaactaaacataggaaattttccaaatcctcCATTTCGATTAATATgca
attaaaaatgaaacttttctatgtttcacttttttgcacttATTCTtcag
aataaaaatatttcagattttaagttcttcttttattcaacgatttttac
gtcactttgttgacaatctaactctcgcatcaaattcccgctctcttcag
taaattgaagatgggattgaaacaaatgtatgaagggtgggattttacag
ccgctcgttgtgcaaggcactgagaggccacgggtgccaaaaaaaAGGGC
CTTTTGAAATgcggcaatctcattggtggaaatttgctAAACAACTGCAA
AAGAGCgccgggaagcaatcagtagaagaaaccactttcgtttttgttgc
agatttcgatataaactttttctttacagggattacttgtcacggtattg
tgtcaacttgtcagtattgtattgttgcaaagggaaagataaaagaggta
agactagcctagtttctaatcctgatataggagtttaagcttagactgac
aatcgaacgtaattgaagcaatcgaatggcaaatcctgggtaatattcga
ttgcgttcaacaatcgaattgcaattattcgattgtgttcaactgcattc
aattgcgttcaatttatattcggcgttcgatttgtTCGGTTGACACCGTC
TGGGTATAAAGTTTGTGGATATCAGTGTCAGGATGATTTATCAATAACTC
AAtactcattccattgttttgacgaaAGACTTTTCATTTAGCCTGGAAAC
CTGGCAAAAAAACCCATATTCATGAACGCTGAACGATGAATTataaaata
cacaatttctctttcacactgagtaggcttttaaggggtcactcacatat
cgattcttacCACGACTAACATCAAATTGACGctaatttgaaaacccccc
acccccacctcttcacgtcaaagtttaaaaataatcaaaaatcgatgaaa
ctctaaattttctccttcactttcattgttatttcgtcagccatctttat
ttttgctaagcctcaaatatttttcatttaaaaaataacggatataattt
ctaaacttttttacCAATAATCCcagatttttttatctgtatatAAGAGC
CGTTGATggtatatttttcatgaaaaatgacCTTTATTCTGGCTTCttaa
caatttcttttttttttaattttcaaatcttttcattGTTCACTTTcagc
ttaaaaaaaacaaagcataACAATGAGCCGACAGCAAATAGGTAAACCAA
ATAAGCATGTCAATGAAAGCTATGGTGCAGGAAACAATATCATGAAGTTT
TATATCACAGAATATTCAAGTCGTCTTGGTATAGACGATTTCACTCCTCA
AAAAGGAAGTTGTGAGGGAACTGGCTACAAAAGCAACTTTCGCCCAGGCG
TTTATTACACAAGAAAACTTGATGAGCTAGATAATCCTACAATGGGGTAA
TAACACCTTTTGTCCAGTAGTTTATAGTTGAAATTGAGTTGAATTTATCT
TAAAACCTACTTAAAAACTACGTTTTTACTAACGTAAATTTTTAACATTA
ACTTTATCATTTGCCAAAAATGAAGCACAATAGCTTAGAAAGTCTGTCAA
GGAAAATAAAATCCTGCTTTTTAAAATATGAAGGCATAATCCACCTATTT
CAGCTTCTGAAAGATTGATAATgatccaaattttttactttaggAAAATT
GTTGACAAGAATTACAAATCGTTGACTCATAAAGATTACCAACCATCAAG
AGGACACAGTGGAAAAGAACCTTTGCCCCTCTCTACTCAAACTGCTTCAA
CAGGGTTCTCTAAAGAACATCAAACAGTCCCAACTGAGCGAGAAGCTTAT
GCTATGTTTCCTAATCTGGCCATGTCAAGCTACAAAGAGAAAACACCTCT
ACTTCACACTTTAAAAAACAAAGATCCCATAGCAGCTGAAAATGCCAGAA
GCGGCCCTGCATATAGTTCAACAGAAAGCCATACACAATTTACAAAGAAA
CATTCTCATATAGAGACTGATGATAAAATCACAGGACCTCTTGAGAACAC
AGGCTTTACACGTGCCAAGAACCCTGAACCAGTCACCCACTACCCTGAAG
CAAACCACAAAAGTGTGCAACCAACATTAAAATCCTACTTGAATCCGATT
GTACCGAGTATCATGAAGACTTCGTATCAACCACACCAACACAGTGATGG
ACGTGAAAGATTGAGTGGCATTTCAAAACATGCAAACCCTGATACCGGAT
TCACAAGATTCATCCAGCCTACAGGTGCTCACACTGCTGCTAAAGGGAAA
GTATGTCATTCTAAACTTCATATTTGAGAatatactttcaaaaaaacgaa
caattTATTCTTCAGATATGATTGAATATTGGCTACCATTCCGCTCCAAG
AAACCCGAATTTTCCCACATCTTTGACCTACAGACTTCATTGTTTTTGAT
CTTTTAGTTATCGATATCGATTTCCTTTCTAACAAAATTCCAGAATATTG
CTTTCGAAAACTATCCTAGACTTTTATTGTGATATCTCATTATATTTTCA
CAAACACTTCAGGTTTACACCACACTGGGAGAAGTTGACAACCCGTTCAC
GGTGGAGCGAACCAAGAAATCAGATCCTGCTGAATATCTCAATATGACAA
ACCCACATCCTTATCCGAGGTAATTCAATATCCAAAAATTACCAACTTAA
CCCATTAATTTGATCGGTTTATAATGTATGATACAAAAACATAATGAACA
AATCTAACCTGAATATGAGTTTGTTTCTCCACTATTTTTTCTATATTTGC
ATAAATTCGTACGAGTTATTCGCAACAACTTTCACTATGTATTGAGTTTC
TCGGCCATTCTCGGTTTTTCCTGGCAATTATAAGTAAGCAATTATCGATC
TTAGAATTTAGggtgtttataattttttttctgtttcacAATAGTTTGAG
TAAATCAATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATGAAA
AACTCGGTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACGGac
aacaacaaaagtttttggtCGACACCCAATGATTCTGAACAGTACAAAAC
TGTCTATAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCGAGC
GTTCTCGTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGGTTC
ACAAAGAGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGGGAG
CCAATTGAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCACGTG
ACCCATTTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTgctt
ttagcttgaaaatttcaagtcagaTATTCGGAGTTAATGAAAGAGTTTTA
TGCTTAGGGTTGTCAGGATATGTCAGCATTTATTCGAATTCGTACTAGAA
AAAGTTGGGtcgattttcaatttcatgtaTCTGATTTAGAGTAACTCGAt
tgtttttattacaaatttCAGTTACTACTCATTCTTCAGGATTGGAATGA
AAACTTTGACCCTTAATATTTGAATATTGCGGAAACTTACCCGGCCTAGA
TATGACCAAAACTCTTCGGAATTCGAGAAATTATGGATTGTTTATCGCGT
TTCCTTCGGTCctatttttttcgtttttgatttttattgattttataaag
GAATGAGGAATgaggtttttgaatttttttttatggaaataattttttga
atgattttatttttgtacatagcaaatttatttttataatttaactgtaa
aattttgaaggggctgaaaaatattattctctactttaggcgtacaaact
ttcgcgagcagaaactttcacaaggtcgaaaaatcgcgaaattcacgaca
tttactttcgcgtaTCATCCTGTTAAGAAAATTCAAAgacattaactttc
gcgaaaaaggccaagtttctgctcgcgaaagtttgttcTTCATCAGAACC
AGTAATTCTT

Coding sequence (CDS) from alignment at sc0000130:529367..535626+

>TCONS_00011557 ID=TCONS_00011557|Name=TCONS_00011557|organism=Clytia hemisphaerica|type=CDS|length=5412bp|location=Sequence derived from alignment at sc0000130:529367..535626+ (Clytia hemisphaerica)
ATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAATGAAAGCTA
TGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAATATTCAAGTC
GTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGTGAGGGAACT
GGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAGAAAACTTGA
TGAGCTAGATAATCCTACAATGGGgAAAATTGTTGACAAGAATTACAAAT
CGTTGACTCATAAAGATTACCAACCATCAAGAGGACACAGTGGAAAAGAA
CCTTTGCCCCTCTCTACTCAAACTGCTTCAACAGGGTTCTCTAAAGAACA
TCAAACAGTCCCAACTGAGCGAGAAGCTTATGCTATGTTTCCTAATCTGG
CCATGTCAAGCTACAAAGAGAAAACACCTCTACTTCACACTTTAAAAAAC
AAAGATCCCATAGCAGCTGAAAATGCCAGAAGCGGCCCTGCATATAGTTC
AACAGAAAGCCATACACAATTTACAAAGAAACATTCTCATATAGAGACTG
ATGATAAAATCACAGGACCTCTTGAGAACACAGGCTTTACACGTGCCAAG
AACCCTGAACCAGTCACCCACTACCCTGAAGCAAACCACAAAAGTGTGCA
ACCAACATTAAAATCCTACTTGAATCCGATTGTACCGAGTATCATGAAGA
CTTCGTATCAACCACACCAACACAGTGATGGACGTGAAAGATTGAGTGGC
ATTTCAAAACATGCAAACCCTGATACCGGATTCACAAGATTCATCCAGCC
TACAGGTGCTCACACTGCTGCTAAAGGGAAAGTTTACACCACACTGGGAG
AAGTTGACAACCCGTTCACGGTGGAGCGAACCAAGAAATCAGATCCTGCT
GAATATCTCAATATGACAAACCCACATCCTTATCCGAGTTTGAGTAAATC
AATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATGAAAAACTCG
GTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACGGacaacaac
aaaagtttttggtCGACACCCAATGATTCTGAACAGTACAAAACTGTCTA
TAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCGAGCGTTCTC
GTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGGTTCACAAAG
AGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGGGAGCCAATT
GAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCACGTGACCCAT
TTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTgcttttagct
tgaATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAATGAAAG
CTATGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAATATTCAA
GTCGTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGTGAGGGA
ACTGGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAGAAAACT
TGATGAGCTAGATAATCCTACAATGGGgAAAATTGTTGACAAGAATTACA
AATCGTTGACTCATAAAGATTACCAACCATCAAGAGGACACAGTGGAAAA
GAACCTTTGCCCCTCTCTACTCAAACTGCTTCAACAGGGTTCTCTAAAGA
ACATCAAACAGTCCCAACTGAGCGAGAAGCTTATGCTATGTTTCCTAATC
TGGCCATGTCAAGCTACAAAGAGAAAACACCTCTACTTCACACTTTAAAA
AACAAAGATCCCATAGCAGCTGAAAATGCCAGAAGCGGCCCTGCATATAG
TTCAACAGAAAGCCATACACAATTTACAAAGAAACATTCTCATATAGAGA
CTGATGATAAAATCACAGGACCTCTTGAGAACACAGGCTTTACACGTGCC
AAGAACCCTGAACCAGTCACCCACTACCCTGAAGCAAACCACAAAAGTGT
GCAACCAACATTAAAATCCTACTTGAATCCGATTGTACCGAGTATCATGA
AGACTTCGTATCAACCACACCAACACAGTGATGGACGTGAAAGATTGAGT
GGCATTTCAAAACATGCAAACCCTGATACCGGATTCACAAGATTCATCCA
GCCTACAGGTGCTCACACTGCTGCTAAAGGGAAAGTTTACACCACACTGG
GAGAAGTTGACAACCCGTTCACGGTGGAGCGAACCAAGAAATCAGATCCT
GCTGAATATCTCAATATGACAAACCCACATCCTTATCCGAGTTTGAGTAA
ATCAATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATGAAAAAC
TCGGTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACGGacaac
aacaaaagtttttggtCGACACCCAATGATTCTGAACAGTACAAAACTGT
CTATAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCGAGCGTT
CTCGTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGGTTCACA
AAGAGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGGGAGCCA
ATTGAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCACGTGACC
CATTTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTgctttta
gcttgaATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAATGA
AAGCTATGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAATATT
CAAGTCGTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGTGAG
GGAACTGGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAGAAA
ACTTGATGAGCTAGATAATCCTACAATGGGgAAAATTGTTGACAAGAATT
ACAAATCGTTGACTCATAAAGATTACCAACCATCAAGAGGACACAGTGGA
AAAGAACCTTTGCCCCTCTCTACTCAAACTGCTTCAACAGGGTTCTCTAA
AGAACATCAAACAGTCCCAACTGAGCGAGAAGCTTATGCTATGTTTCCTA
ATCTGGCCATGTCAAGCTACAAAGAGAAAACACCTCTACTTCACACTTTA
AAAAACAAAGATCCCATAGCAGCTGAAAATGCCAGAAGCGGCCCTGCATA
TAGTTCAACAGAAAGCCATACACAATTTACAAAGAAACATTCTCATATAG
AGACTGATGATAAAATCACAGGACCTCTTGAGAACACAGGCTTTACACGT
GCCAAGAACCCTGAACCAGTCACCCACTACCCTGAAGCAAACCACAAAAG
TGTGCAACCAACATTAAAATCCTACTTGAATCCGATTGTACCGAGTATCA
TGAAGACTTCGTATCAACCACACCAACACAGTGATGGACGTGAAAGATTG
AGTGGCATTTCAAAACATGCAAACCCTGATACCGGATTCACAAGATTCAT
CCAGCCTACAGGTGCTCACACTGCTGCTAAAGGGAAAGTTTACACCACAC
TGGGAGAAGTTGACAACCCGTTCACGGTGGAGCGAACCAAGAAATCAGAT
CCTGCTGAATATCTCAATATGACAAACCCACATCCTTATCCGAGTTTGAG
TAAATCAATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATGAAA
AACTCGGTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACGGac
aacaacaaaagtttttggtCGACACCCAATGATTCTGAACAGTACAAAAC
TGTCTATAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCGAGC
GTTCTCGTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGGTTC
ACAAAGAGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGGGAG
CCAATTGAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCACGTG
ACCCATTTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTgctt
ttagcttgaATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAA
TGAAAGCTATGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAAT
ATTCAAGTCGTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGT
GAGGGAACTGGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAG
AAAACTTGATGAGCTAGATAATCCTACAATGGGgAAAATTGTTGACAAGA
ATTACAAATCGTTGACTCATAAAGATTACCAACCATCAAGAGGACACAGT
GGAAAAGAACCTTTGCCCCTCTCTACTCAAACTGCTTCAACAGGGTTCTC
TAAAGAACATCAAACAGTCCCAACTGAGCGAGAAGCTTATGCTATGTTTC
CTAATCTGGCCATGTCAAGCTACAAAGAGAAAACACCTCTACTTCACACT
TTAAAAAACAAAGATCCCATAGCAGCTGAAAATGCCAGAAGCGGCCCTGC
ATATAGTTCAACAGAAAGCCATACACAATTTACAAAGAAACATTCTCATA
TAGAGACTGATGATAAAATCACAGGACCTCTTGAGAACACAGGCTTTACA
CGTGCCAAGAACCCTGAACCAGTCACCCACTACCCTGAAGCAAACCACAA
AAGTGTGCAACCAACATTAAAATCCTACTTGAATCCGATTGTACCGAGTA
TCATGAAGACTTCGTATCAACCACACCAACACAGTGATGGACGTGAAAGA
TTGAGTGGCATTTCAAAACATGCAAACCCTGATACCGGATTCACAAGATT
CATCCAGCCTACAGGTGCTCACACTGCTGCTAAAGGGAAAGTTTACACCA
CACTGGGAGAAGTTGACAACCCGTTCACGGTGGAGCGAACCAAGAAATCA
GATCCTGCTGAATATCTCAATATGACAAACCCACATCCTTATCCGAGTTT
GAGTAAATCAATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATG
AAAAACTCGGTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACG
GacaacaacaaaagtttttggtCGACACCCAATGATTCTGAACAGTACAA
AACTGTCTATAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCG
AGCGTTCTCGTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGG
TTCACAAAGAGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGG
GAGCCAATTGAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCAC
GTGACCCATTTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTg
cttttagcttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006477XLOC_006477Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011557-exon-sc0000130-1491911889:529367..529452TCONS_00011557-exon-sc0000130-1491911889:529367..529452Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1510915933:529367..529452TCONS_00011557-exon-sc0000130-1510915933:529367..529452Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1575043694:529367..529452TCONS_00011557-exon-sc0000130-1575043694:529367..529452Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1491911889:532816..533062TCONS_00011557-exon-sc0000130-1491911889:532816..533062Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1510915933:532816..533062TCONS_00011557-exon-sc0000130-1510915933:532816..533062Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1575043694:532816..533062TCONS_00011557-exon-sc0000130-1575043694:532816..533062Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1491911889:533310..533916TCONS_00011557-exon-sc0000130-1491911889:533310..533916Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1510915933:533310..533916TCONS_00011557-exon-sc0000130-1510915933:533310..533916Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1575043694:533310..533916TCONS_00011557-exon-sc0000130-1575043694:533310..533916Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1491911889:534179..534285TCONS_00011557-exon-sc0000130-1491911889:534179..534285Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1510915933:534179..534285TCONS_00011557-exon-sc0000130-1510915933:534179..534285Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1575043694:534179..534285TCONS_00011557-exon-sc0000130-1575043694:534179..534285Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1491911889:534561..535626TCONS_00011557-exon-sc0000130-1491911889:534561..535626Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1510915933:534561..535626TCONS_00011557-exon-sc0000130-1510915933:534561..535626Clytia hemisphaericaexon
TCONS_00011557-exon-sc0000130-1575043694:534561..535626TCONS_00011557-exon-sc0000130-1575043694:534561..535626Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011557-proteinTCONS_00011557-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:529367..535626 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.0002	5.41559	3.50413	2.71726	126.117	93.0754	46.6408	46.5634	19.5979	33.0338	18.2406	14.9419	3.80471	3.21761	2.79335	5.33763	4.46224	5.27922	4.65517	5.12663	3.53905	4.24489	4.98261	4.54527	6.06201	7.97379	18.2682	19.8508	4.15698	4.55161
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR031410PPP1R32
Blast
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BLAST of TCONS_00011557 vs. Swiss-Prot (Human)
Match: PPR32 (Protein phosphatase 1 regulatory subunit 32 OS=Homo sapiens GN=PPP1R32 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.899e-36
Identity = 122/462 (26.41%), Postives = 208/462 (45.02%), Query Frame = 2 
Query:  110 MSRQQIGKPNKHVNESYGAGNNIMKFYITEYSSRLGIDDFTPQKGSCEGTGYKSNFRPGVYYTRKLDELDNPTMGKIVDKNYKSLTHKDYQPSRGHSGKEPLPLSTQTASTGFSKEHQTV--PTEREAYAMF------PNLAMSSYKEKTPLLHTLKNKDPIAAENARSGPAYSSTESHTQFTKKHSHIETDD----KITGPLENTGFTRAKNPEPVTHYPEANHKSVQPTLKSYLNPIVP--SIMKTSYQPHQHSDGRERLSGISKHANPDTGFTRFIQPTGAHTAAKGKVYTTLGEVDNPFTVERTKKSDPAEYLNMTNPHPYPSLSKSIYNGQQTNEPALNEKLGNVSIGRKENTGHTDNNKSFWSTPND---SEQYKTVYNDTFFDKNRIPE-TERSRINDDCTRDLQGDGFTKSEKLHPALGSYDEGSQLRFLHPYVNRSIKARDPFYGETKYAHKS 1441
            M +  +G  + +V  S G   + +KFY T Y +  G +DF P+ GS  GTGYKSNF+P V     L+ LDNP  G+    +++S+  + Y+P     GK PLP S +  S+G+ +E  +   PT+      F      P         + PLLH  + +DP+  EN R GP + ++E ++++ +    ++  D    K  G  E +GFT+  +  P+   P +      P L       +P  S+ K+ + P  H  G E L  +++ +  +T F+R  +                  + NP       +     +             + ++  QQTN  AL   LG  ++G+KE TG + NN  +  +P D    ++Y T YN  +F+   IP+  ++        +     G+  S+ +     + +    LR LHP+V R++ + DPFY  T ++ + 
Sbjct:    2 MGKLPLGVVSPYVKMSSGGYTDPLKFYATSYCTAYGREDFKPRVGSHVGTGYKSNFQPVVSCQASLEALDNPARGEQAQDHFQSVASQSYRPLEVPDGKHPLPWSMRQTSSGYGREKPSAGPPTKEVRKVHFDTQEHGPQAITGLEPREVPLLHQQQGQDPLERENFRHGPRFMTSEYNSKYLR--DPLDQPDFLQKKSIGAKEGSGFTKQSHQSPIVFQPPSQALPGDPAL-------LPGQSVTKSDFLPKTHLHGDEFLPVLARGSKRETAFSRGNE-----------------RILNPRVPPPCPEPSSVSHQQF----------QPLHRMQQTNV-AL---LGRETVGKKEPTGFSLNNPMYVRSPCDPDRDQRYLTTYNQGYFEN--IPKGLDQEGWTRGGIQPQMPGGYALSQPVSCMEATPNPMESLRHLHPHVGRTLTSADPFYQNTPHSSRC 421
The following BLAST results are available for this feature:
BLAST of TCONS_00011557 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPR322.899e-3626.41Protein phosphatase 1 regulatory subunit 32 OS=Hom... [more]
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