TCONS_00011549 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011549
Unique NameTCONS_00011549
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011549 ID=TCONS_00011549|Name=TCONS_00011549|organism=Clytia hemisphaerica|type=transcript|length=1160bp
ttttgataatttttcttagatttttatttattcCATTACATGCGAACTGG
AAGCTAATTTGGATAAAGgaagcttctagtgtagctagaatGATTTGCTG
CCAAGCGAGGAACAATTTCACCCTCAAAATGTTAGTTTCAGGGCTGTTGT
TATCAGTATCAGTATTGCCGCTCTTAACACTTGCTTCAAACTCTGTGACA
TACGAATTGGATACGTTCACTAAAGGTCACGTGTTTACTGTTCAAAAAGA
TCAAGAAGTTATTCTTAAGAGCAAGAGCCGTTATTATCTCATACAAATCA
ACGGTCAAAATCATGCGATGCCTCTTCGACTCGACACTGGTGGATACGGG
ACCATCACTGTACTAGCTTTCTTTACTCCCTACTCAAAAGACACATTCTA
CATCCAAATTGATGACCATGTTGAATATACCAAGCTCTCAGATAACGAAC
TTCTCCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTGACGATGGCTTTG
GAAAGTGAAGAAGGTGCTCAATTGTACCAACTCACAGATGAAGAACTTGA
TAATTCGGACCGATTTATGGCTATGAAGATCACGGTGGAGAATGATATTT
CCGGTGCTCCCTTCGACGCAAGCATCACCGTCATCGAAGAAGACGCATTG
AGGAGTAAAATCAACGTTAACTTCACCTCCTACAAAGAATTTCGTGATAT
TTTCATCAGTTACGAGACTTCAGAGATGGAAATCTATTTCATTTACGACC
ATCCTTTACCATATACTCCGGTTACCGTATCATGCGTTGCCACTGATTAT
TTCACCGGCGAAACCCGACAAACGTTCGACTTATCGAACATACCGCTAAA
TTCAGTACCGAATGCTCCTAATGGATATTTACGATTCGCCTTCACCGCTG
CTCAATACTCGGACATGAGTTTATACACCATCAAATGTGGTGATAGTTTT
ACCAAGACTATCTTTATCGATCCTTTAGGGTTGGGTTACATCAGAATACG
AGGAGCTGATGTTGCTTCACAAGAAAGCGAAGAGATGTTCCAAATAACTT
TCAATGAGACTTTCTACATCGGAGGGCTATTCATATTTTATTCAATCGAT
GGTCAGTACCAAAACGAGGCTATATACACTTTAGAAGGAGGTCAAATATC
TCTCCNatca
Run BLAST on NCBI

protein sequence of TCONS_00011549-protein

>TCONS_00011549-protein ID=TCONS_00011549-protein|Name=TCONS_00011549-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
LIIFLRFLFIPLHANWKLIWIKEASSVARMICCQARNNFTLKMLVSGLLL
SVSVLPLLTLASNSVTYELDTFTKGHVFTVQKDQEVILKSKSRYYLIQIN
GQNHAMPLRLDTGGYGTITVLAFFTPYSKDTFYIQIDDHVEYTKLSDNEL
LLGVEGGNDVFLTMALESEEGAQLYQLTDEELDNSDRFMAMKITVENDIS
GAPFDASITVIEEDALRSKINVNFTSYKEFRDIFISYETSEMEIYFIYDH
PLPYTPVTVSCVATDYFTGETRQTFDLSNIPLNSVPNAPNGYLRFAFTAA
QYSDMSLYTIKCGDSFTKTIFIDPLGLGYIRIRGADVASQESEEMFQITF
NETFYIGGLFIFYSIDGQYQNEAIYTLEGGQISLXS
Run BLAST on NCBI

transcript from alignment at sc0000130:425970..432528+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011549 ID=TCONS_00011549|Name=TCONS_00011549|organism=Clytia hemisphaerica|type=transcript|length=6559bp|location=Sequence derived from alignment at sc0000130:425970..432528+ (Clytia hemisphaerica)
ttttgataatttttcttagatttttatttattcCATTACATGCGAACTGG
AAGCTAATTTGGATAAAGGTAAGATTAGTGTATGAACATTTGCAcgtcat
tgaagagtgtgattaaagattaaaattgctctctacagtgtgcaattaac
gattaattgctcttttgaaggcgcgccaaatgagaaaaaataagcCATCG
TGCGATTAGTTTTATAACCTGCTATGGGTAGCTCAAGTCACCTGAACTTT
GATATCCCCCAGGGAAATAGCAAAACAAAACATATCAGTCTACAATGAAA
CAATCAATATCTTTTATGCAAGGGTAAAACTTTTCCCAACGAGGCATAAA
ATGATACCGCTCACAACTTATTTCTGCTAAGATAACTCGAACAACATACA
TCATTTTGATTACCTCGCTTTCGACCTTTTCACTACATTGTGTATCGTAT
TAAGTTAAGCActgaataaaaaatgtttttttgtttctttaggaagcttc
tagtgtagctagaatGATTTGCTGCCAAGCGAGGAACAATTTCACCCTCA
AAATGTTAGGTACGTAACTGTAAAGGCAAATCTTCGATGGTTTCCTTCTA
ATTAatgttcaaaaaaaaagaatggtGAAAACTTGTTGCAACTGAACACA
GTAGAACCTCCATTTTTTtaatgaggatttgactagtaAATGACCGGGGA
AAATAAAATTGTCTGCtgatcagaggtgtccgccttttagactGTCCGTT
AATTGGAGATTTTTACTGTAATCTTAGgatgaaaattaaaagattttggc
TTTCACTATCAGATCTTATTCGTAAACTTGAAGTTAAAATCGCTCAAAAC
AGTTGTCGGCATGTGCCTACATCTGGTAAATGGGTCGAACCGTTTTTGAA
AGGGTTTTAGGAACAAAGAAATATCTTCGTAAGGGCGGGGATGCTTCTTT
TCTGTCTTTGATTTACAGTGAAGTTAACGGTGCAAATTTTATAACATGAC
TCATTTATTTAGTTTCAGGGCTGTTGTTATCAGTATCAGTATTGCCGCTC
TTAACACTTGCTTCAAACTCTGTGACATACGAATTGGATACGTTCACTAA
AGGTCACGTGTTTACTGTTCAAAAAGATCAAGAAGTTATTCTTAAGAGGT
ATGGGAACGAAGTTGATAagagccaaactacagtcaactctctctaactc
GATCTTCACGGGACCaaaattttattcgaattacaaaaagtGTAATTTCC
TTCTCTTTTTTTATGGCAACAGTTATTTAAACTTAATTACATATTACACA
TCGCaatacacgttcttttttataagaacaagttaagaacatttttatgg
actctaaaacacccaattttctTAGGAAATAGCTCAAAGATACACtccta
aaatgataaaaataagaacacttttagaCTTGAAGCtcaagaagttaaga
acatccaaaggcttcaacaattcaggacgttcttataaaagaaacgtgtT
TTCGGGACACACTGTATCTACTCCCTTTTTTTTTCAGCAAGAGCCGTTAT
TATCTCATACAAATCAACGGTCAAAATCATGCGATGCCTCTTCGACTCGA
CACTGGTGGATACGGGACCATCACTGTACTAGCTTTCTTTACTCCCTACT
CAAAAGACACATTCTACATCCAAATTGATGACCATGTTGAATATACCAAG
CTCTCAGATAACGAAGTGAGTTGACTGTTTAGAAAAACATGCTTATGCCT
AGCACGCGAATCCCTTTGATTGAAGATGAAAATTTGATTACTTTAATGTA
GATAAATTTTCGTATGCAGATATTTTCGTCAAAAATAATTTAATTTTCGC
GGGACTTATTTTCGCGGATCGTCCCCTTTTTCAACTAATTTCTTCGATCT
TTCTATGGGTTTTGGCTAAAATCTAAGGTTTTTGTCAAAGAAACGGTTGT
TACTATAACGAGGAACAAGAAGTAACGAGTGCTTAAAAATGGAAGTAACG
AGTACTAGACCTAAGTAACGAGTACTTTAGTCGCGAAATTGACGCTCAAA
TGTCTTGCTTTTGTCACCAGTCACTTGTTTTAAGGTTTATGACGTCTTTG
CTAGATTTTTTTTCGGTCACCTTTTTCTCGTGATTGGCTTGTCCTTTCAA
ATTTGGCATGTGACTCTTTGACAATAATGGAAATTAACCTAATTAGTTTT
TGTCAACTTTTGGTGATAACGTCATCACTTAAGCCTTTTTTCGCAACTTG
CGAAATGTAATTCTCGCGAAAACCAATCCACTTTAGATAGGCTGAAAGGG
AAAAACTATTCGGTGTAATGACACATTGAGCCCAGCTTCTTTAGAGTTCC
TTCCATTTTCACCCAACTCTGAATTGTAACACTTTTCACTTTAAAACACG
GCATTATCTCCTAATATATCTTACTCGCTTTATCTTGCATTGCATGTTCT
CCCTATCAGAACAGCTTGTAAATGTCATTTCACATTTTCTTTCAGCTTCT
CCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTGACGATGGCTTTGGAAA
GTGAAGAAGGTGCTCAATTGTACCAACTCACAGATGAAGAACTTGATAAT
TCGGACCGATTTATGGCTATGAAGATCACGGTGGAGAATGATATTTCCGG
TGAGTAATGTGTTTCTGTATACAGCCCCCATGTGCTATAAGGGCCCACTT
AATGATCATACATTTATAACTCGTCGGCCATCtgcaatgaaaattttcaa
tcgtTAACAATATTAAAAGGGATATTAATCTTTCAGAATTATCCTATCTa
aagttttcattaaaaacaagttttaaatAGGTAGAAAGTTGGCCGTGAAT
tgaaatttgcttctttttattttattggacctacctggaggtcctatgaa
ttaacctgtgtgttttggactttgttataAATCTGTTCATTAGTTTCTCC
TAAGTTTTTGTACAAAGACTATGAAAAAGCTCATTTTTCGGAAAATAATA
TTGTTTCATTGAAACCTTGAAATCGTTTTGGAAATAAATACACGTAGTGC
ACCAGATAGTGGTCTTTAAGTATCCAGTTCACGCATACGTGTGTCGTCTT
CTTCTTATGTTGGTTGTTTACGTAGAAAGTATCGTACTTGGGCTTTCTCT
TTGATCAATCTGTGATCGTAAAACTATATCGAAACAACATTCATTTATGA
ACGTTCAAATGGTCATTCttcatataatttttattttaaacaatatttcg
acctccTTAGTGGAGGTCTTCGTCAGGTTTACAAACGTTCAGTTGAAATC
AttgttttgacgtcaaatgacATGTTGGCAATGACCTCAACCTGATATGC
TAGAGCATTGGTTTCCAGAACCTAGACGTCACATACTGACCATTGTCTAG
ATTTAGAACATGTTCACTATGTGGCACCGTCTCACGGAACTGGATCTTAA
ATGCTTCTCTTACCTTTCTATCAAATTTCTTATGTAGGTGCTCCCTTCGA
CGCAAGCATCACCGTCATCGAAGAAGACGCATTGAGGAGTAAAATCAACG
TTAACTTCACCTCCTACAAAGAATTTCGTGATATTTTCATCAGTTACGAG
GTGTGCTTTCAATTCCTCTTCCCTCGGCTGCCGGCAAATTCCAATTATTT
TACAATACATGGACCATAGATTTaaaaagcccaaagggctaaatgtcgtg
ctttaagccatcgcaggtaaaaagtgaatatcggaaaaaatattgttgct
attgttttcgaaaacccgcgaatcTTCTGATTGATCAAGCGCTGAAATGC
TATTGTATTGTCActtgacttaggtaggatttcctacctaacagGCACAT
ATTTCAGCAAAACCCTACAtccagcccttcgggctttataaatctttgaC
ATGAACCCTTCAACGAACGATTTTCTCTGCCAACAATACTGCGTGAGTTC
AGAAATCTTGTGGTTCGATTTTTGTGATTCGACTTAATAATAGCTTTACT
GCGTGAGTTTAAAATCCATGACAGAACCGAATTCCTAGAGAACTCAACGA
AACGTTCTTTGCGGGTTTGCGACAACCTGCTTAACCTCGTCAATGTCATG
TCGAGAGAAACGCCTATTTTCTGTAAGAATTGCGATGACGGGCTAGTCAA
TACTAGGCTGTACACATCCCCTGGTATGTTTTGATAAAGGGGGTTTGTAT
CGTCTACAATATTTCTGTCCCAacccccgtcttttcttttgtcattttcg
attatgcgtcatagcaatacagcgacttcttttttttctttgttctattt
tgaatttttttttctccttagACTTCAGAGATGGAAATCTATTTCATTTA
CGACCATCCTTTACCATATACTCCGGTTACCGTATCATGCGTTGCCACTG
ATTATTTCACCGGCGAAACCCGACAAACGTTCGACTTATCGAACATACCG
CTAAATTCAGTACCGAATGCTCCTAATGGATATTTACGATTCGCCTTCAC
CGCTGCTCAATACTCGGACATGAGTTTATACACCATCAAATGTGGTGATA
GTTTTACCAAGACTATCTTTATCGATCCTTTAGGTAAGAAGGTTTCGTTC
AataattcttttcttttgaagcACCAACACATCAGTAATGATGAAGTGGC
AAGATGGTTATTGAATAGCACGTTTTGTTTGTCCCCATCAAGAGAtagta
ccgagtttatgtatcggaggatatcgagggcgacggtaagtgaaaccgat
acaaaacaaagtcgatagttgatgtacggctccatatcgcctttgctcac
ctaaacagacgacggtattttggtgtttttacggTCATCGATCAAAGTGG
ACGGCAATTTCGGCcccatgtcaactttgctttataccgcccccctcgat
ttatctcgaatactaAACTcgctacaatcagggacaaaatacttggcaca
aaagggaaattcaccggggtgttttgaaaccacaatcgatttgtaagtgc
tctaaagtagttTCGAAGGGTagattttaactctgagttttaacgctaga
cttaagacttagaaccTTAGGATGTgtggatccaaaagttcaaaaatggt
ccagtagggcttgaaatatagcctagaaaccaataaatccctcccagatc
gaaatacttgatgaaatcaagtcgaaggcctaaaaattgacattcccGCT
CGagcttcaattttcaaaaaattgtaaattagccaaaagtgccaatatat
tatgacactGATTGTAGTATGTTACGAAAGCAGCctgcgaggcgaccttt
tttcctATGTGTTTCAGCTAGACATTTTGATCCGTTCTGATTGGGGCTTC
GTAAATCCGTCGGCTAGAAatgatgatgtgttctgatgagacaggggtat
attcAATGTCGTCTAAcatgttcttgttgtctaggtaacttTAAAGGTTT
CCttgaaatcagaacacatcatttgtataaaaaattgaaggtcATAACAT
GTAGTCTCCTATAAGAAAAGAgcacattatttcaaaaaaattgtttcgcC
GGCTGCTCCTGATGTTAGTCTTACACATCTAACTTTTGGATTATGAAAGC
TGGGTGTTGATGTAGTATAGAACTTGATCTGGAATCCAAATTTacttgtt
tcaaaaaaggctGTCTCCAATTTCATGTTAGTGTATGCCAACTTGTTTAT
AAATCTTACCTACCCTGTTCGTTTATGCTAACTTCTTctcaaattttcct
tttaagGGTTGGGTTACAATACCCTTTTCGTTTATGCTAGCTTCTTCGCA
AATCTTCCTTTTAAGGGTTGGGTTACACGACCATGTTCGTTTATGCTAAC
TTCTTCGCAAATCTTCCTTTTAAGGGTTGGGTTACACTACCCTTTTCGTT
TATGCTAGCTTCTTCGCAAATCTTCCTTTTAAGGGTTGGGTTACACGACC
ATGTTCGTTTATGCTAACTTCTTCGCAAANAAGTGACTTGGTTTTATGTT
CATGATTGACGTTTGCTATTGGTGCGATTTCGCTTTATAacgtggtcgtg
ttacaaaaatacatgCTGTttataggaaaaaaataagatctaccTGAAAT
TTTCTCCAGAACTTTCTCCATCCTCTATAGGATGctaacatccctttttt
gggcaatttcttttttccccaggcaaaaccttAAGggcgaatttttttga
aaatNATTGGGCTACACTACCCTCTGTTCGTTTATGCTAACTTCTTCACA
AATCTTCCTTTTAAGGGTTGGGTTACATCAGAATACGAGGAGCTGATGTT
GCTTCACAAGAAAGCGAAGAGATGTTCCAAATAACTTTCAATGAGACTTT
CTACATCGGAGGTATAATAATCAatctgaaattgttttgttaatctTTCA
AGTCTCAGTATATCATTAGAAAACAAGTCATCAACGACCTCGTAAATTCT
GTTCAATTTTTGTCTTTTCATAGGGCTATTCATATTTTATTCAATCGATG
GTCAGTACCAAAACGAGGCTATATACACTTTAGAAGGAGGTCAAATATCT
CTCCNatca

Coding sequence (CDS) from alignment at sc0000130:425970..432528+

>TCONS_00011549 ID=TCONS_00011549|Name=TCONS_00011549|organism=Clytia hemisphaerica|type=CDS|length=10422bp|location=Sequence derived from alignment at sc0000130:425970..432528+ (Clytia hemisphaerica)
ttgataatttttcttagatttttatttattcCATTACATGCGAACTGGAA
GCTAATTTGGATAAAGgaagcttctagtgtagctagaatGATTTGCTGCC
AAGCGAGGAACAATTTCACCCTCAAAATGTTAGTTTCAGGGCTGTTGTTA
TCAGTATCAGTATTGCCGCTCTTAACACTTGCTTCAAACTCTGTGACATA
CGAATTGGATACGTTCACTAAAGGTCACGTGTTTACTGTTCAAAAAGATC
AAGAAGTTATTCTTAAGAGCAAGAGCCGTTATTATCTCATACAAATCAAC
GGTCAAAATCATGCGATGCCTCTTCGACTCGACACTGGTGGATACGGGAC
CATCACTGTACTAGCTTTCTTTACTCCCTACTCAAAAGACACATTCTACA
TCCAAATTGATGACCATGTTGAATATACCAAGCTCTCAGATAACGAACTT
CTCCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTGACGATGGCTTTGGA
AAGTGAAGAAGGTGCTCAATTGTACCAACTCACAGATGAAGAACTTGATA
ATTCGGACCGATTTATGGCTATGAAGATCACGGTGGAGAATGATATTTCC
GGTGCTCCCTTCGACGCAAGCATCACCGTCATCGAAGAAGACGCATTGAG
GAGTAAAATCAACGTTAACTTCACCTCCTACAAAGAATTTCGTGATATTT
TCATCAGTTACGAGACTTCAGAGATGGAAATCTATTTCATTTACGACCAT
CCTTTACCATATACTCCGGTTACCGTATCATGCGTTGCCACTGATTATTT
CACCGGCGAAACCCGACAAACGTTCGACTTATCGAACATACCGCTAAATT
CAGTACCGAATGCTCCTAATGGATATTTACGATTCGCCTTCACCGCTGCT
CAATACTCGGACATGAGTTTATACACCATCAAATGTGGTGATAGTTTTAC
CAAGACTATCTTTATCGATCCTTTAGGGTTGGGTTACATCAGAATACGAG
GAGCTGATGTTGCTTCACAAGAAAGCGAAGAGATGTTCCAAATAACTTTC
AATGAGACTTTCTACATCGGAGGGCTATTCATATTTTATTCAATCGATGG
TCAGTACCAAAACGAGGCTATATACACTTTAGAAGGAGGTCAAATATCTC
TCCNatcattgataatttttcttagatttttatttattcCATTACATGCG
AACTGGAAGCTAATTTGGATAAAGgaagcttctagtgtagctagaatGAT
TTGCTGCCAAGCGAGGAACAATTTCACCCTCAAAATGTTAGTTTCAGGGC
TGTTGTTATCAGTATCAGTATTGCCGCTCTTAACACTTGCTTCAAACTCT
GTGACATACGAATTGGATACGTTCACTAAAGGTCACGTGTTTACTGTTCA
AAAAGATCAAGAAGTTATTCTTAAGAGCAAGAGCCGTTATTATCTCATAC
AAATCAACGGTCAAAATCATGCGATGCCTCTTCGACTCGACACTGGTGGA
TACGGGACCATCACTGTACTAGCTTTCTTTACTCCCTACTCAAAAGACAC
ATTCTACATCCAAATTGATGACCATGTTGAATATACCAAGCTCTCAGATA
ACGAACTTCTCCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTGACGATG
GCTTTGGAAAGTGAAGAAGGTGCTCAATTGTACCAACTCACAGATGAAGA
ACTTGATAATTCGGACCGATTTATGGCTATGAAGATCACGGTGGAGAATG
ATATTTCCGGTGCTCCCTTCGACGCAAGCATCACCGTCATCGAAGAAGAC
GCATTGAGGAGTAAAATCAACGTTAACTTCACCTCCTACAAAGAATTTCG
TGATATTTTCATCAGTTACGAGACTTCAGAGATGGAAATCTATTTCATTT
ACGACCATCCTTTACCATATACTCCGGTTACCGTATCATGCGTTGCCACT
GATTATTTCACCGGCGAAACCCGACAAACGTTCGACTTATCGAACATACC
GCTAAATTCAGTACCGAATGCTCCTAATGGATATTTACGATTCGCCTTCA
CCGCTGCTCAATACTCGGACATGAGTTTATACACCATCAAATGTGGTGAT
AGTTTTACCAAGACTATCTTTATCGATCCTTTAGGGTTGGGTTACATCAG
AATACGAGGAGCTGATGTTGCTTCACAAGAAAGCGAAGAGATGTTCCAAA
TAACTTTCAATGAGACTTTCTACATCGGAGGGCTATTCATATTTTATTCA
ATCGATGGTCAGTACCAAAACGAGGCTATATACACTTTAGAAGGAGGTCA
AATATCTCTCCNatcattgataatttttcttagatttttatttattcCAT
TACATGCGAACTGGAAGCTAATTTGGATAAAGgaagcttctagtgtagct
agaatGATTTGCTGCCAAGCGAGGAACAATTTCACCCTCAAAATGTTAGT
TTCAGGGCTGTTGTTATCAGTATCAGTATTGCCGCTCTTAACACTTGCTT
CAAACTCTGTGACATACGAATTGGATACGTTCACTAAAGGTCACGTGTTT
ACTGTTCAAAAAGATCAAGAAGTTATTCTTAAGAGCAAGAGCCGTTATTA
TCTCATACAAATCAACGGTCAAAATCATGCGATGCCTCTTCGACTCGACA
CTGGTGGATACGGGACCATCACTGTACTAGCTTTCTTTACTCCCTACTCA
AAAGACACATTCTACATCCAAATTGATGACCATGTTGAATATACCAAGCT
CTCAGATAACGAACTTCTCCTAGGAGTAGAAGGTGGGAATGATGTCTTTT
TGACGATGGCTTTGGAAAGTGAAGAAGGTGCTCAATTGTACCAACTCACA
GATGAAGAACTTGATAATTCGGACCGATTTATGGCTATGAAGATCACGGT
GGAGAATGATATTTCCGGTGCTCCCTTCGACGCAAGCATCACCGTCATCG
AAGAAGACGCATTGAGGAGTAAAATCAACGTTAACTTCACCTCCTACAAA
GAATTTCGTGATATTTTCATCAGTTACGAGACTTCAGAGATGGAAATCTA
TTTCATTTACGACCATCCTTTACCATATACTCCGGTTACCGTATCATGCG
TTGCCACTGATTATTTCACCGGCGAAACCCGACAAACGTTCGACTTATCG
AACATACCGCTAAATTCAGTACCGAATGCTCCTAATGGATATTTACGATT
CGCCTTCACCGCTGCTCAATACTCGGACATGAGTTTATACACCATCAAAT
GTGGTGATAGTTTTACCAAGACTATCTTTATCGATCCTTTAGGGTTGGGT
TACATCAGAATACGAGGAGCTGATGTTGCTTCACAAGAAAGCGAAGAGAT
GTTCCAAATAACTTTCAATGAGACTTTCTACATCGGAGGGCTATTCATAT
TTTATTCAATCGATGGTCAGTACCAAAACGAGGCTATATACACTTTAGAA
GGAGGTCAAATATCTCTCCNatcattgataatttttcttagatttttatt
tattcCATTACATGCGAACTGGAAGCTAATTTGGATAAAGgaagcttcta
gtgtagctagaatGATTTGCTGCCAAGCGAGGAACAATTTCACCCTCAAA
ATGTTAGTTTCAGGGCTGTTGTTATCAGTATCAGTATTGCCGCTCTTAAC
ACTTGCTTCAAACTCTGTGACATACGAATTGGATACGTTCACTAAAGGTC
ACGTGTTTACTGTTCAAAAAGATCAAGAAGTTATTCTTAAGAGCAAGAGC
CGTTATTATCTCATACAAATCAACGGTCAAAATCATGCGATGCCTCTTCG
ACTCGACACTGGTGGATACGGGACCATCACTGTACTAGCTTTCTTTACTC
CCTACTCAAAAGACACATTCTACATCCAAATTGATGACCATGTTGAATAT
ACCAAGCTCTCAGATAACGAACTTCTCCTAGGAGTAGAAGGTGGGAATGA
TGTCTTTTTGACGATGGCTTTGGAAAGTGAAGAAGGTGCTCAATTGTACC
AACTCACAGATGAAGAACTTGATAATTCGGACCGATTTATGGCTATGAAG
ATCACGGTGGAGAATGATATTTCCGGTGCTCCCTTCGACGCAAGCATCAC
CGTCATCGAAGAAGACGCATTGAGGAGTAAAATCAACGTTAACTTCACCT
CCTACAAAGAATTTCGTGATATTTTCATCAGTTACGAGACTTCAGAGATG
GAAATCTATTTCATTTACGACCATCCTTTACCATATACTCCGGTTACCGT
ATCATGCGTTGCCACTGATTATTTCACCGGCGAAACCCGACAAACGTTCG
ACTTATCGAACATACCGCTAAATTCAGTACCGAATGCTCCTAATGGATAT
TTACGATTCGCCTTCACCGCTGCTCAATACTCGGACATGAGTTTATACAC
CATCAAATGTGGTGATAGTTTTACCAAGACTATCTTTATCGATCCTTTAG
GGTTGGGTTACATCAGAATACGAGGAGCTGATGTTGCTTCACAAGAAAGC
GAAGAGATGTTCCAAATAACTTTCAATGAGACTTTCTACATCGGAGGGCT
ATTCATATTTTATTCAATCGATGGTCAGTACCAAAACGAGGCTATATACA
CTTTAGAAGGAGGTCAAATATCTCTCCNatcattgataatttttcttaga
tttttatttattcCATTACATGCGAACTGGAAGCTAATTTGGATAAAGga
agcttctagtgtagctagaatGATTTGCTGCCAAGCGAGGAACAATTTCA
CCCTCAAAATGTTAGTTTCAGGGCTGTTGTTATCAGTATCAGTATTGCCG
CTCTTAACACTTGCTTCAAACTCTGTGACATACGAATTGGATACGTTCAC
TAAAGGTCACGTGTTTACTGTTCAAAAAGATCAAGAAGTTATTCTTAAGA
GCAAGAGCCGTTATTATCTCATACAAATCAACGGTCAAAATCATGCGATG
CCTCTTCGACTCGACACTGGTGGATACGGGACCATCACTGTACTAGCTTT
CTTTACTCCCTACTCAAAAGACACATTCTACATCCAAATTGATGACCATG
TTGAATATACCAAGCTCTCAGATAACGAACTTCTCCTAGGAGTAGAAGGT
GGGAATGATGTCTTTTTGACGATGGCTTTGGAAAGTGAAGAAGGTGCTCA
ATTGTACCAACTCACAGATGAAGAACTTGATAATTCGGACCGATTTATGG
CTATGAAGATCACGGTGGAGAATGATATTTCCGGTGCTCCCTTCGACGCA
AGCATCACCGTCATCGAAGAAGACGCATTGAGGAGTAAAATCAACGTTAA
CTTCACCTCCTACAAAGAATTTCGTGATATTTTCATCAGTTACGAGACTT
CAGAGATGGAAATCTATTTCATTTACGACCATCCTTTACCATATACTCCG
GTTACCGTATCATGCGTTGCCACTGATTATTTCACCGGCGAAACCCGACA
AACGTTCGACTTATCGAACATACCGCTAAATTCAGTACCGAATGCTCCTA
ATGGATATTTACGATTCGCCTTCACCGCTGCTCAATACTCGGACATGAGT
TTATACACCATCAAATGTGGTGATAGTTTTACCAAGACTATCTTTATCGA
TCCTTTAGGGTTGGGTTACATCAGAATACGAGGAGCTGATGTTGCTTCAC
AAGAAAGCGAAGAGATGTTCCAAATAACTTTCAATGAGACTTTCTACATC
GGAGGGCTATTCATATTTTATTCAATCGATGGTCAGTACCAAAACGAGGC
TATATACACTTTAGAAGGAGGTCAAATATCTCTCCNatcattgataattt
ttcttagatttttatttattcCATTACATGCGAACTGGAAGCTAATTTGG
ATAAAGgaagcttctagtgtagctagaatGATTTGCTGCCAAGCGAGGAA
CAATTTCACCCTCAAAATGTTAGTTTCAGGGCTGTTGTTATCAGTATCAG
TATTGCCGCTCTTAACACTTGCTTCAAACTCTGTGACATACGAATTGGAT
ACGTTCACTAAAGGTCACGTGTTTACTGTTCAAAAAGATCAAGAAGTTAT
TCTTAAGAGCAAGAGCCGTTATTATCTCATACAAATCAACGGTCAAAATC
ATGCGATGCCTCTTCGACTCGACACTGGTGGATACGGGACCATCACTGTA
CTAGCTTTCTTTACTCCCTACTCAAAAGACACATTCTACATCCAAATTGA
TGACCATGTTGAATATACCAAGCTCTCAGATAACGAACTTCTCCTAGGAG
TAGAAGGTGGGAATGATGTCTTTTTGACGATGGCTTTGGAAAGTGAAGAA
GGTGCTCAATTGTACCAACTCACAGATGAAGAACTTGATAATTCGGACCG
ATTTATGGCTATGAAGATCACGGTGGAGAATGATATTTCCGGTGCTCCCT
TCGACGCAAGCATCACCGTCATCGAAGAAGACGCATTGAGGAGTAAAATC
AACGTTAACTTCACCTCCTACAAAGAATTTCGTGATATTTTCATCAGTTA
CGAGACTTCAGAGATGGAAATCTATTTCATTTACGACCATCCTTTACCAT
ATACTCCGGTTACCGTATCATGCGTTGCCACTGATTATTTCACCGGCGAA
ACCCGACAAACGTTCGACTTATCGAACATACCGCTAAATTCAGTACCGAA
TGCTCCTAATGGATATTTACGATTCGCCTTCACCGCTGCTCAATACTCGG
ACATGAGTTTATACACCATCAAATGTGGTGATAGTTTTACCAAGACTATC
TTTATCGATCCTTTAGGGTTGGGTTACATCAGAATACGAGGAGCTGATGT
TGCTTCACAAGAAAGCGAAGAGATGTTCCAAATAACTTTCAATGAGACTT
TCTACATCGGAGGGCTATTCATATTTTATTCAATCGATGGTCAGTACCAA
AACGAGGCTATATACACTTTAGAAGGAGGTCAAATATCTCTCCNatcatt
gataatttttcttagatttttatttattcCATTACATGCGAACTGGAAGC
TAATTTGGATAAAGgaagcttctagtgtagctagaatGATTTGCTGCCAA
GCGAGGAACAATTTCACCCTCAAAATGTTAGTTTCAGGGCTGTTGTTATC
AGTATCAGTATTGCCGCTCTTAACACTTGCTTCAAACTCTGTGACATACG
AATTGGATACGTTCACTAAAGGTCACGTGTTTACTGTTCAAAAAGATCAA
GAAGTTATTCTTAAGAGCAAGAGCCGTTATTATCTCATACAAATCAACGG
TCAAAATCATGCGATGCCTCTTCGACTCGACACTGGTGGATACGGGACCA
TCACTGTACTAGCTTTCTTTACTCCCTACTCAAAAGACACATTCTACATC
CAAATTGATGACCATGTTGAATATACCAAGCTCTCAGATAACGAACTTCT
CCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTGACGATGGCTTTGGAAA
GTGAAGAAGGTGCTCAATTGTACCAACTCACAGATGAAGAACTTGATAAT
TCGGACCGATTTATGGCTATGAAGATCACGGTGGAGAATGATATTTCCGG
TGCTCCCTTCGACGCAAGCATCACCGTCATCGAAGAAGACGCATTGAGGA
GTAAAATCAACGTTAACTTCACCTCCTACAAAGAATTTCGTGATATTTTC
ATCAGTTACGAGACTTCAGAGATGGAAATCTATTTCATTTACGACCATCC
TTTACCATATACTCCGGTTACCGTATCATGCGTTGCCACTGATTATTTCA
CCGGCGAAACCCGACAAACGTTCGACTTATCGAACATACCGCTAAATTCA
GTACCGAATGCTCCTAATGGATATTTACGATTCGCCTTCACCGCTGCTCA
ATACTCGGACATGAGTTTATACACCATCAAATGTGGTGATAGTTTTACCA
AGACTATCTTTATCGATCCTTTAGGGTTGGGTTACATCAGAATACGAGGA
GCTGATGTTGCTTCACAAGAAAGCGAAGAGATGTTCCAAATAACTTTCAA
TGAGACTTTCTACATCGGAGGGCTATTCATATTTTATTCAATCGATGGTC
AGTACCAAAACGAGGCTATATACACTTTAGAAGGAGGTCAAATATCTCTC
CNatcattgataatttttcttagatttttatttattcCATTACATGCGAA
CTGGAAGCTAATTTGGATAAAGgaagcttctagtgtagctagaatGATTT
GCTGCCAAGCGAGGAACAATTTCACCCTCAAAATGTTAGTTTCAGGGCTG
TTGTTATCAGTATCAGTATTGCCGCTCTTAACACTTGCTTCAAACTCTGT
GACATACGAATTGGATACGTTCACTAAAGGTCACGTGTTTACTGTTCAAA
AAGATCAAGAAGTTATTCTTAAGAGCAAGAGCCGTTATTATCTCATACAA
ATCAACGGTCAAAATCATGCGATGCCTCTTCGACTCGACACTGGTGGATA
CGGGACCATCACTGTACTAGCTTTCTTTACTCCCTACTCAAAAGACACAT
TCTACATCCAAATTGATGACCATGTTGAATATACCAAGCTCTCAGATAAC
GAACTTCTCCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTGACGATGGC
TTTGGAAAGTGAAGAAGGTGCTCAATTGTACCAACTCACAGATGAAGAAC
TTGATAATTCGGACCGATTTATGGCTATGAAGATCACGGTGGAGAATGAT
ATTTCCGGTGCTCCCTTCGACGCAAGCATCACCGTCATCGAAGAAGACGC
ATTGAGGAGTAAAATCAACGTTAACTTCACCTCCTACAAAGAATTTCGTG
ATATTTTCATCAGTTACGAGACTTCAGAGATGGAAATCTATTTCATTTAC
GACCATCCTTTACCATATACTCCGGTTACCGTATCATGCGTTGCCACTGA
TTATTTCACCGGCGAAACCCGACAAACGTTCGACTTATCGAACATACCGC
TAAATTCAGTACCGAATGCTCCTAATGGATATTTACGATTCGCCTTCACC
GCTGCTCAATACTCGGACATGAGTTTATACACCATCAAATGTGGTGATAG
TTTTACCAAGACTATCTTTATCGATCCTTTAGGGTTGGGTTACATCAGAA
TACGAGGAGCTGATGTTGCTTCACAAGAAAGCGAAGAGATGTTCCAAATA
ACTTTCAATGAGACTTTCTACATCGGAGGGCTATTCATATTTTATTCAAT
CGATGGTCAGTACCAAAACGAGGCTATATACACTTTAGAAGGAGGTCAAA
TATCTCTCCNatcattgataatttttcttagatttttatttattcCATTA
CATGCGAACTGGAAGCTAATTTGGATAAAGgaagcttctagtgtagctag
aatGATTTGCTGCCAAGCGAGGAACAATTTCACCCTCAAAATGTTAGTTT
CAGGGCTGTTGTTATCAGTATCAGTATTGCCGCTCTTAACACTTGCTTCA
AACTCTGTGACATACGAATTGGATACGTTCACTAAAGGTCACGTGTTTAC
TGTTCAAAAAGATCAAGAAGTTATTCTTAAGAGCAAGAGCCGTTATTATC
TCATACAAATCAACGGTCAAAATCATGCGATGCCTCTTCGACTCGACACT
GGTGGATACGGGACCATCACTGTACTAGCTTTCTTTACTCCCTACTCAAA
AGACACATTCTACATCCAAATTGATGACCATGTTGAATATACCAAGCTCT
CAGATAACGAACTTCTCCTAGGAGTAGAAGGTGGGAATGATGTCTTTTTG
ACGATGGCTTTGGAAAGTGAAGAAGGTGCTCAATTGTACCAACTCACAGA
TGAAGAACTTGATAATTCGGACCGATTTATGGCTATGAAGATCACGGTGG
AGAATGATATTTCCGGTGCTCCCTTCGACGCAAGCATCACCGTCATCGAA
GAAGACGCATTGAGGAGTAAAATCAACGTTAACTTCACCTCCTACAAAGA
ATTTCGTGATATTTTCATCAGTTACGAGACTTCAGAGATGGAAATCTATT
TCATTTACGACCATCCTTTACCATATACTCCGGTTACCGTATCATGCGTT
GCCACTGATTATTTCACCGGCGAAACCCGACAAACGTTCGACTTATCGAA
CATACCGCTAAATTCAGTACCGAATGCTCCTAATGGATATTTACGATTCG
CCTTCACCGCTGCTCAATACTCGGACATGAGTTTATACACCATCAAATGT
GGTGATAGTTTTACCAAGACTATCTTTATCGATCCTTTAGGGTTGGGTTA
CATCAGAATACGAGGAGCTGATGTTGCTTCACAAGAAAGCGAAGAGATGT
TCCAAATAACTTTCAATGAGACTTTCTACATCGGAGGGCTATTCATATTT
TATTCAATCGATGGTCAGTACCAAAACGAGGCTATATACACTTTAGAAGG
AGGTCAAATATCTCTCCNatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006471XLOC_006471Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011549-proteinTCONS_00011549-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011549-exon-sc0000130-1491911889:425970..426037TCONS_00011549-exon-sc0000130-1491911889:425970..426037Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:425970..426037TCONS_00011549-exon-sc0000130-1510915933:425970..426037Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:425970..426037TCONS_00011549-exon-sc0000130-1575043694:425970..426037Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:426462..426528TCONS_00011549-exon-sc0000130-1491911889:426462..426528Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:426462..426528TCONS_00011549-exon-sc0000130-1510915933:426462..426528Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:426462..426528TCONS_00011549-exon-sc0000130-1575043694:426462..426528Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:426982..427117TCONS_00011549-exon-sc0000130-1491911889:426982..427117Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:426982..427117TCONS_00011549-exon-sc0000130-1510915933:426982..427117Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:426982..427117TCONS_00011549-exon-sc0000130-1575043694:426982..427117Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:427507..427684TCONS_00011549-exon-sc0000130-1491911889:427507..427684Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:427507..427684TCONS_00011549-exon-sc0000130-1510915933:427507..427684Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:427507..427684TCONS_00011549-exon-sc0000130-1575043694:427507..427684Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:428465..428618TCONS_00011549-exon-sc0000130-1491911889:428465..428618Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:428465..428618TCONS_00011549-exon-sc0000130-1510915933:428465..428618Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:428465..428618TCONS_00011549-exon-sc0000130-1575043694:428465..428618Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:429457..429569TCONS_00011549-exon-sc0000130-1491911889:429457..429569Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:429457..429569TCONS_00011549-exon-sc0000130-1510915933:429457..429569Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:429457..429569TCONS_00011549-exon-sc0000130-1575043694:429457..429569Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:430291..430552TCONS_00011549-exon-sc0000130-1491911889:430291..430552Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:430291..430552TCONS_00011549-exon-sc0000130-1510915933:430291..430552Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:430291..430552TCONS_00011549-exon-sc0000130-1575043694:430291..430552Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:432235..432330TCONS_00011549-exon-sc0000130-1491911889:432235..432330Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:432235..432330TCONS_00011549-exon-sc0000130-1510915933:432235..432330Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:432235..432330TCONS_00011549-exon-sc0000130-1575043694:432235..432330Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1491911889:432443..432528TCONS_00011549-exon-sc0000130-1491911889:432443..432528Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1510915933:432443..432528TCONS_00011549-exon-sc0000130-1510915933:432443..432528Clytia hemisphaericaexon
TCONS_00011549-exon-sc0000130-1575043694:432443..432528TCONS_00011549-exon-sc0000130-1575043694:432443..432528Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:425970..432528 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0373057	0.036379	0.168958	0.165299	0.150927	0	0.143887	0	0.0628736	0.0389396	0.0755914	0	0.0496217	0	0.0635503	0.0454661	0	0.143522	0.0793136	0.041498	0.973871	0.5278	0.42774	1.39996	2.72364	4.39686	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011549 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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