TCONS_00011533 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011533
Unique NameTCONS_00011533
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2075

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011533 ID=TCONS_00011533|Name=TCONS_00011533|organism=Clytia hemisphaerica|type=transcript|length=2075bp
aaatgaaaaaactccaAGGAAGGCAGATGTCcatattctttttctttcta
ataaatattattttcaaataatttttttgagaaattaaatcATTAGTTTT
GAGTCTTACTGTACATTTAAACATTATTTCAGAGACACAGTAACGGCAGA
ATGCCTATCGCCAAAGTCCCAGTTATTCACAAGTTTGGAATCATTTCCAG
AACACATCAAGAGTCGATAAAGCAGAGAATTCTAGAAAGAGAGGCTGGTA
AAATACCAGGATTTATCTCTCGAATACCGAGATCATCATCAGCTCCTGAA
ACAAACATGATTACAAGCCATGAAAGTTTAGAAGAAGTAATATTTCAGcT
TCAAAACGAAAAGGAGGAGCTAGTACTgatgcatcatgaaaaagtagcca
aagaaattttaaagaaaattaagTTCAAACTAACGTCTATTGAGAAAAAA
GATATAGTGCAAACATTGCAGATATGTTGGAGAGAGCTTGCCATGTTGAT
CAGCTGCAACCATTGCAGGATTGTCGAAGAATCACTCAACTTGCTGAAAG
TTTCAATGATTATATCTCCACTTTCGAAGCAAATTATTCCaagTCTTCTT
GACGTGTCACTGGCCATTCAACAAGCCCTTCTACTAATGGATAATGCTGA
TATTTCGACAAAAGAACACAGTTTAAATGAGTTGTTAGCTGAGACATCTT
TTTATGTTTTCGTGAGAGTATTTTATCACCACATGGCATCTGATTTAGAA
CAGCTGCCAGGGAGTCATCAGATGGAAGGGTTATACTTAATCAACAAAGG
ATTGTCGAAGCTGCTTGTACAGTATGAAGAGAAACCGACTATTTGGATGT
ACATGAATGCTACAAATCATATTGTATCACAAATATCTAAAAGTTCAGCG
CACAAAGTCGAAGATTTCATTTCAAATCTAGAGAAAGCAGAACAGGATGC
GCCCAAATCAGATGATTCTCACCCGCCAGACGAGTCAGCAAAAGAGGGAA
ACGACACACGCAAAAATTCCATTTCAACTTTATTATGGAACACTTTATGT
GTTTGGAAAAGTTTATCACGtcaaaataaactttcaaaacatgtGCTGGA
TGAtatcaaaagttttgatttctCAACCATAACAACCAAACATCAACACT
GGATGGAAGTGGTGAtatcaattttcattctttcTGAGTGTGCGAAAGTT
AAGATGGAATATCTCTCCTTGTTGGTGGCTATCGGACCACAAGCCATCTT
GCGAAAGAAATCAGAGATGACGTGGTCGACCACACTACAATGCTTCTACT
TGCGAGCACTTGCTGATGTTGGCCTTCACGGTTTGACCACGGACATCATC
ACACAAGCTTTACTCGGTGATCGAAATAAGGACGGTTTAGCAAATTTCCT
TCAAAGAGCTGGCGATGATAAATGTAGTTGTGGTGTACGTTACCTAGCAC
ACCAATACCTTCATGACATTTATCTACACTACAAGAAAGATTCCCTCAAA
GAAGCCGTTCGAAATGCATTGTGGGAAACACTGGAAAAGTTTCGGGACAA
AGAAAAGAATCCCTTAGTCCTTTGCATCAACAAGTCAGAGGAAAAGGAAT
CGTCAACATCGTTAGAGAACCTGGTCTTGAAGAAGATTTCCACAAACCTT
TCCATCATTTATTTACCTCTGGAGAATGATAAACGAagaaaaacacccaa
aaaagaaagaaagtgtCTACCTAATAAAACGGGCGCCAAGGAAAGCCCGA
GACACAATGTTAAACCAAAGATAAATTCTCGTTCGTCCACGGACCATGTG
TCGTCATCTTCGGGAGAAGAGGCCTGGTTGAACATGCAATGCATCGCAAG
CGATCAGTATGGAGCAGAAAACCATCAAACGGAAGAAAAGGACAAAACAA
GAGCTTTAAGAGAGAAAACTTTCGCGGAATAAATTCcccgaaaaattttt
gttcaattgCGCCAACTAATTTTAGGAAAGTATTTAGTTTAATGTAAGTG
AAAATTGTAAAGCTGGAATTTGGCTTTCTGTTTCATAAAAATTAGtgata
atttgaaaaagaaaacaaatcaaac
Run BLAST on NCBI

transcript from alignment at sc0000130:150087..165533+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011533 ID=TCONS_00011533|Name=TCONS_00011533|organism=Clytia hemisphaerica|type=transcript|length=15447bp|location=Sequence derived from alignment at sc0000130:150087..165533+ (Clytia hemisphaerica)
aaatgaaaaaactccaAGGAAGGCAGATGTCcatattctttttctttcta
ataaatattattttcaaataatttttttgagaaattaaatcATTAGTTTT
GAGTCTTACTGTACATTTAAACATTATTTCAGAGACACAGTAACGGCAGA
ATGCCTATCGCCAAAGTCCCAGTTATTCACAAGTTTGGAATCATTTCCAG
AACACATCAAGAGTCGATAAAGCAGAGAATTCTAGAAAGAGAGGCTGGTA
AAATACCAGGATTTATCTCTCGAATACCGAGATCATCATCAGCTCCTGAA
ACAAACATGATTACAAGGTAAATCCCTTAACTTTACTAAACTATAGATTc
cttcataaaataaaatacaaaaaagatttGCTCGGCCATTCTCACTTCAA
TCAACAAACTAGCTTGGTCAACAATATGAAACAGTACTTAGATACTTAAT
TTTTAAGctacatttttttctcaattggtTCAgtagttgcaggaggcttt
gaagCCTATGGCTATAAAAGCCTATTTTTcacaactatagacgctttcat
tGGAGTGCTCTGTCAGCACAtggactacccaattcccctcacatggcatg
ggttgacccgggcaaaggttcattcacttgccaagtgaacagctgcgagt
gggaatcgaacctcagttgCCTGTGCAGCAAAGTCTATGACCACTATACC
GCCACAGCGCCTATTATAGTaacaggccatattttagaaaggcaagtAGA
CAGCGTCCATTGATGGccaaaagggcactttttccagtatttttccacta
aaatggctatttttagcaatattttagtaatttcaggaGAGGCAGTTCAG
GTTATCGGACAATAACCGGACACTTAGCGTCTTaggggcatgaaaaatgg
cctgagTAAGTGCTGCTTTATTGCCTTTGCTTAAACATGTTTAGTAATAG
ACAATTTGCTAGTTAGAATGTCCtaatgaataattaaaaactccagtgtC
TCAATCAACAGGAGTCtcaattttggaaaatcctAAAGAACAGATCAAGA
ACAATCACAGCCATCGATCATGGCTAAGAAAATGCTGAAGTTAAAGGGGC
GACAAAGCTATTTAAGTATAATAATATGTACATTTAGCATTGACTGGTAg
caaaaaatacttttaaaagcaaCCACAATATCGAAAACATAAGTGTTGAT
CTTAACATTGCCAGAACAGTCCATTACAGCCGAAAAAGGagtttttttgc
aatttctcaAGAAATTTTTAACATCAATGAAAAACAACAATATTTTTGgg
tgaaaatattgaaaatatgtcGGAAAAATGTAATCCTGTAATTTCTCCAT
GTTCTATTATGCactttcctgattttttgcttaaaattcattttagcAAT
ATATGTAAACTTTAgattttttattggaattttttcGGATGTATATCTTC
TTGTTGTCAGAACTTTTTAAAAGTCAATCTAACAGTAAATTATATAACTG
GTAAAAATTAGTTGTTAACCTTCTTTCAAGTTTTTATTCATTTCagcttt
tttctgtttttttttcttgtttttctaaTTCAACATCACCACATAAGTTC
TTTTTGTACTAggtataccgggtgacccacgaaaaagtttgGACAGTTTT
CGGCGTctcgaggccgaacaaatgtctcacagtgcttgaaattttaatat
gtagaaagtagatattctaacttaaagtttgacctattactttttaaatt
tgacccacAAGTtccctacttatgagcttttaaaagtcaaaattcacttt
tcggaaagagcgaaattacgtcaaaaaagaggtatcaaattgttttatta
tcaatcaatcaagcaaGGTCGTTAAATCGTTAGAAAAGAGCatgttagat
atttttattcaattttaaaactttttttagattctttactttcacaaaat
ttattaaTAAGTTATTCGTTCAGAAAAGAACCACTACCATGCACTTTCTA
GCATAATCGAGGCAAACCCACACTCTCTGTTCTTTCATAAGACGCgacat
tttcataaagaaggcaaattttgcctatttgcaaaatatttttgataaaa
atatttacgataaatttatataaatctacttcgtcgttaatttattattt
tacaaactttaaTTACCTACAACACTAATTAACGAGGTCGTAAAACATCA
GCACACTCGAAAAACACAATGTTAAAGATAAAGAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAACACTAATTAACGAGGTCGTAAAACATCAGCACACTCGAAAA
ACACAAtgttaaagataaagaaaacaattataattttatacctcattttt
gacgtgttttttcacTTTCCaataattgaattttgactttaaaagctcat
aaatgaagaaccactgaaccaaatttaagAAGTAATAGCTCAAAGTTATT
ATTAGAGCATCctgtatctttaaaaaaaaagattgactttatattacttt
tatttcagACCTTAGCCAACGAAAACCGTcggaactttttcgtgggtcac
ccggtatataaattgaaattttttttttggatgatATCACTGATCATGTC
TAGTTCTAGTTCTCTATTGAATTATCACATAATACATTATGtacaatttt
tgtgattttaaacataaaggataaaataaaataaataagttaaaaaaatt
aGCGCAGATgttgtgagaactttttaatagtCATTCTAACagtaaaaatt
agtttttaacCTTCTTTCGAGTTTTTATTCATTTCAGTTTTTTGTCTAAG
ATGAGCAAAAATTTCCCTTTTAAAGCCATTACAAACTATAAGCATAATGA
TAAGTTCCCTGAGATCAAAAGGCTCATTTTATCCTAAGTACTCAGCTAGc
ttttcaaaggttttcaaCAATATagttgacattaaaaataaaaatgtcct
gaaaatgtgtcaatttttatACCTACTCTGACAACAGTCAGAGAAACATT
TTACATTTACAGGCTGATGTGATGGGCGGGTTAAACCAAATAATTAAGTC
ATTAGTCAAGTGTGGGCGGCAAGATGAATATATTTTTGGCTTTTTAAGAT
CATTATCATCCTCATTATTTCTGTTATATCTTGAGAAAGTTAAATGATTA
AACAATTACTTACTCAAAGTCAACTCTTGACAGAGGGGTACTCAATCTGT
GTATGTGACCCCAAAATCAGCCCTCTAGACTCCAGAGAAAATTTACCCTG
ATTTTAGTAAATTTGTGCgaacaaacctttttttaaaggagAAGTGCATT
TTGTTGAAATATTAGtccattttaaggcattttaaGGCAAAGAATCCTCA
GATTTTCCAAACTTTGTCACAAAAAGctatatattttcttttcttcctaT
AGCCATGAAAGTTTAGAAGAAGTAATATTTCAGGTATTGCATATTTTATA
CTTGTTTTAACTGTCAATGTTAAagaattttgatcattttttttaCTGAC
AAGCTGTCCCTCACGATAACCCTACAATATATACTTCTTGCTTGAACTAA
CTTAAAGAAATGACTTAATTGAGGTCTGTCTTACAAAAATCTGCAGCTAA
GATGAAAattgttgtaactttttgtCGGTTGTCCCAGCCAGCTTTGTTAT
TGTTGAAATTATCATCAAGAATGGAATGTTATATCAAATAGataaaaaca
attctaaaaaaaaaaatggaaaaaggaGATGGGAAGTGAAGAAGAAATCA
ATTATTATCAATGATTGTGCTATGATTGTTTGATTCATATTTATAAAGAA
CATTTTCACTCTTAAAGAATGTCatcactttgaaaaatattcatattcaa
agcttttgtccattttacccggggggggggggcactcgtatgatctggcc
tacgtcatgtgccgcgttTAAGGGGGggttttcagcatcccaaaatgcac
tgtaagggtgtgtatttgtgagattgcactgcaagggtcgaattttgaaa
cgaattccaaataattgttaaaaagaaaggtttttacttctcgtttgttt
gaaaaagtttctattgtctgataattacagctgacaagaataattttctc
agtttttctttgaaacagaaaatttcccaagcttctttttttcacgcaga
tttacagctgagaaatatagtgcactataaagGTTGGGTAAATCAATAGA
AAATGCAGGTAatttttcagccatattgaactgcactgtaagtgtacgat
tttgaaaagcagattttgcgcggcacataccgtcgtttcgaaatcgagtg
gcCCCCGGGCTATTTTACTATGAAAAAGggttcttttgttctttttgtga
tgattttaaagttaatcagtGATGATTAATGAGATCTTTCAATTGAatta
atatttaaaaatattttttcacagtTATGATTCTCCAAGTTTAAAAAATA
GCAATGATAGCACAATTTTATCAAGACATGAATTTCTTCCTTCTTCGtta
ttcatcttcatttttcaatctttttgaattttgtctCATTGATAATGTTT
CATTTCTGAGTattttttcaacaagcacaagaCCACAATTTAAGTTAATT
TAGTTGctgttaatttttcattttttctaatttttagcTTCAAAACGAAA
AGGAGGAGCTAGTACTgatgcatcatgaaaaagtagccaaagaaatttta
aagaaaattaagGTAAGAAgattttattatcaattttttttatatgttta
aTGAAGTCTGTTTAATGTACTTATTAGTTTTCGTGATTTAGCCCTTCTTC
TAGCTGTTTCTTTAACACCATGTCCTCCATTATTCTTCACAATCTATAAA
AAACGTATTCTATTTCTCTATAGTTCAAACTAACGTCTATTGAGAAAAAA
GATATAGTGCAAACATTGCAGATATGTTGGAGAGAGCTTGCCATGTTGAT
CAGCTGCAACCATTGCAGGATTGTCGAAGGTACCATTAAATTGCTTTATA
GTAGTGCATCCTAAATGTGACTTTTCAACTCATATATAAATAAACGCAAA
TAAAAGGTGCTAGCTCAGCTAGTCATTGATGTTGAAAATCAATCATCTTT
CATTTTAGAATCACTCAACTTGCTGAAAGTTTCAATGATTATATCTCCAC
TTTCGAAGCAAATTATTCCaaggtattatcattttgctTTGACACGGTCC
CCTCAAGAAATTTAAAGgagtaatagttatcgcacggtaccgagtgcaat
atgggatatatttttcgggttcagatttttcgtcataTTCTTTTAGCGTT
TAGGCGAAAACTATATATTCCATATATATTCCATATTGTGATAAATGgtt
tatcgtcaacttgaaaattatcatttttaaactttctttcttttatttta
acgTGTAAAACATAAAATACAGCACTTATatacgcgtttttagccaatca
gattgctcatatttttcatgttgacgataagaaaccatttgtcttttatt
tcaatttttcttcgcCTTTTAGTCTTCTTGACGTGTCACTGGCCATTCAA
CAAGCCCTTCTACTAATGGATAATGCTGATATTTCGACAAAAGAACACAG
TTTAAATGAGTTGTTAGCTGAGGTATGTCCTAATTTGACGttacaaaata
atttaaaattttctttgggtattatactaaaaaaatttttttaatgcttt
aagcatcaaatgttgaattttagtgtttttggtTTCTTCAGTTTTAGGAT
AACTTAAATTTTCTTTACTCGCTATTTCATTTCTAGACATCTTTTTATGT
TTTCGTGAGAGTATTTTATCACCACATGGCATCTGATTTAGAACAGGTTA
GTGGAAGTGGAAGTGGaatgttctgattttttgctttttctagAAATCCC
GTTATTCAGTGCCCACTgtatttgaaaataaacaacaaaCTCTAACAGTC
TAAGGTTATAGAAATGTTTAAGTCAGTGTTCAATTTTACATTGTGACAGT
ACAACTATATGTGGGGAAGCTCTTCTCAACAGCATAAAAATGCGTTAGTA
AAACATTCTTTACGCTCTTTTGCATTATTTTTTTATCTCTATCTTAGCTG
CCAGGGAGTCATCAGATGGAAGGGTTATACTTAATCAACAAAGGTAAACT
TCTAAAGTTACATAACTACCCGGgtgtactagggttgcgagctgacgggg
ggggggggggcgcccgactttcgacctttggacccttaccgagactaaaa
agaagaaaacaaacgaaaattttgggaattttacgacccttagcgggaca
aatttgctaaatttcgaccaaatttcgatctttccgggggtaataagttg
aaattttcctatttttccgacccttagtgggactgaaatttgattttctg
atttttctgacccttagcgggacttttgaaatccaaaaaaggtaccccta
AGGGCGGCacaagggcggcacataccgtaccctctatttgcctaagtacc
cccccccccggcataACTAATATGatattttgacaatattttaaCCTTTA
TTTTCATACTACACGATTTCATCTTCTGGGCATATAATATTATTTAAAGT
TGGTTCCCTTTTGCGTAGGATTGTCGAAGCTGCTTGTACAGTATGAAGAG
AAACCGACTATTTGGATGTACATGAATGCTACAAATCATATTGTAAGTTT
CTCTAAAATTATCCCTCTAACTTTCATTTCATTGCGACCGCGTTCACACC
CTACTTTGCTTTGAAACGAAACGGCTCCAAAGCACTGTGtgaattcgtca
aaattggaaacgtcaaaaaagaagacgttataAAGCAAAAAACAGTTCgg
ctccactattttcatcggaacggaactgctccgttttcttgctctgAACA
TTCCGAAATGAGTATGAACACTTCCTATCCGTAACAAATACTATTCCGGA
GCGATACGAAACCCTAACGTCTTAACATGGTCTGAGACTCTTTCAGACCA
TTATAAACGAGAAATGCTAAGAAAATTTATGTTACTCAAATAAGAGGGGT
TAAAAGTGTGTTAACTTACTTATGCGGTCTAGACCGCCATCGAAAACTCC
TCCAACAATGAATTTAACTTGATTTAAATTGAGGCTAGAAAAGGTGCCTG
ACAAAAGAACTCTCAAATGGATGTTTTTTTCGAAACCATCTACTGCAAAA
TGATTGGTTGTTTTTACAGGTATCACAAATATCTAAAAGTTCAGCGCACA
AAGTCGAAGATTTCATTTCAAATCTAGAGAAAGCAGAACAGGATGCGCCC
AAATCAGATGATTCTCACCCGCCAGACGAGGTAAACAAAGTTTTCTTATA
CATGAAGCTATTACTTCTATCATTTCTTGGGCCTACATCAGCATTTCTTT
TGTGTTGAAAATTCATAGATtgtcttttatttatatttttgcaGTCAGCA
AAAGAGGGAAACGACACACGCAAAAATTCCATTTCAACTTTATTATGGAA
CACTTTATGTGTTTGGAAAAGTTTATCACGtcaaaataaactttcaaaac
atgtGCTGGATGAtatcaaaagttttgatttctCAACCATAACAACCAAA
CATCAACACTGGTGAGTTCAATTAAAGtcaattaaatgttttttttatat
gtaAATGTCTACCCCGATGTCTATATCAGgttcgcattatgcttagcatt
ctattgttcttaaacaatagagccattgtttaggtgcCAAAAACTGAGCC
TTTATTTGCTTATAAAtgttatgcttatagaaaaaaacatgtacatacTA
TCATTGATCACACTAGAAATGCAAGCTATTTGAATATTGTCATACAGTGC
AGTTTCCATAACCCGAATCTCTATAGCTCGAATGGCTCCTTTACTCAGAA
AAGTAAACCATACCATGCAAAccatactccataactcgagcaATGTTGCT
TTAACCGTGTGTGTTCAAGCAATAGAGACTCGACTCTCTTACAAGACATT
ACCAGTCGGCAAATAATATCATCCCACATCACCTATTATAGATAACaaat
aaattgaatttcttCAATATAACGTACTTCTTTATTTATATGAAGTGttc
aaagttttaaaactcAGTCTCAGTCGGATTACCGTCTCGGCGAAGTAAAA
ACAGAGATTTTTCTGCccttagaatttaaaaaattttaagaaattattca
aaatctagtcttttttatttttgagatgaaaaaaaaatgctttgATCATT
GTATATGTCTTTTTCATTATTTCGCAGGATGGAAGTGGTGAtatcaattt
tcattctttcTGAGTGTGCGAAAGTTAAGATGGAATATCTCTCCTTGTTG
GTGGCTATCGGACCACAAGCCATCTTGCGAAAGAAATCAGGTGTGTGACC
TCTCGTTATTCTTAACCTTTCCTGCGCACaccatgttttgaaaaatttga
ggatttcaaactttttttaaatccaaAACTTCAAATTGGTATAAGAGCTT
GTAGCTTGAGAATTAAGAAATGGTTTTGGTAGTCTACACAATaaacagct
ccaggcttttagttTCACGCtcaaaacgaaggaagatatgacgtagccta
ttgttttggtaccattgaaaaagtatttttatactctttctGTCCCTTTT
AATCAAGTGATAAGGAGTTATAGCGATATATCGGCAAATTCAAAACATGT
ACCTATGAGCCCCTCCCCCCTAATTGACCTTCAATTCCCGCAATCACGCA
AAAATGtttcccaaattcacgcattcacgcaatattttcttaattttcac
gCATGATCACGCAATTGAAaacctagcctgggaatccaagctcataatct
tagaaaaaacaaaaaatacctcacctcacaaagttctaagattatagagc
ttggtgcaggtagatttagtctgacacagaatgttataaacagtctgtgt
gtgaacagactttctgaactttggaaacccaggcaaacacacataatcaa
cttaccataaaaactctttcacaagctctaaagactttcaaaactactaa
aacccacaccaaaacatcagccacatgtatttagacttccagccaacagc
cattttgtttcgaaataaatctatgttttcattttcatttgttttccttt
tttctgcagagtcagctttttccataaattatgcgcgcgcatcgaaatta
tcaaaatgcgcGCGAAAGTACTGCTAAGTAgtacacacccctgtctcagt
gacccggtggcttttaaaatttcaccggggataaaaaattttctttggaa
atccagttgggatttttcaaagacagaaaATACCAGTGGGGACACAGAAT
gagaataaaaatttcagtggggatttcgaaattttcttttttttccaagt
ttgttgaaACGTACAGTAAGTGTGATAAGCatacaattttatttcaatct
ttatgtaattatatggatatgcataatgcataataaaATGTTTCTTTCCT
CCCAGTCTTAATTGGGTCATTAAGTTGAATTACTTATATATCATTTCCTC
CCTAAGttcattttgccaaattttccaaacaTAGACATAGACCTTTCATC
TTGAACGGGTAGAATATAGCAACTATTTGCTAACATGACAGCTATAACAA
GAAATAGACAAGCTGTATTGGAGTGGCTACTTCCCTAGGACAGTTGCCAT
ATATATTTGATGAGATCAACTTATCCTCATGATCTCGGACATAAATTTTG
TATACCATGATCCTAATGAGCAGCCTAGCTCAATGGTACAAGATCGAGCA
ATCGACTCTCAATTTAATATTACCTCCCTTTTTTCGGattcgattgtatt
tgattacgttTACAGGGGGGtttaggatttaaaaagagTAGTGTATCTCT
AGTATTATGACGTAGCGGCTAcataagtgtctaaggaggcgccaccatgg
tttgGGCCGACgggctggaaaatttttgagtagtttaaaattttttcata
cTCAGGTCTAGAGTTCCTAAGCCAAGTTGCTTTTaggccattttgaggcc
tgagccctttaGCACTGCGTTGCTTATAAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNcaattaacaaaataataagacaATCACAATAAATGGAGTCCG
CCAACTTATTTCTTTGATAtgagaatttcatactcaatgtgatgcagatG
ACATGAAAGGACATAAAAAGAGACCAACATGACAGCCATATTCTTGCTAC
AGAGTGGTTTTAGAGCAAATACAAAACTATACAGGTCTTTATTTTCCTCT
CGCGGCGATCTAAAATCTGGtctgcaatatttttagagtactccaatagg
tactccattggagtactccatggagctaCTCCATGTTTTACAACTCCCTA
TCAAAACCTctgtgagagaaaaaaaaagttatgttgaagcttttttgagt
caaagttgttcatttgttttgaaaaataaaaatctattatCAAACTTTAA
TGAAGCTTAtggacatttttcaacaaaattaaatatgaaataaaatgtaa
aaactagAAAAACAATAATATAATGCCTCTACATTCATTTCTCCTTATGT
CACTTTCACTAAAATTCCAAGAGACACCagccaaaacataaaataattca
caataataattccaaaaaaatgaaaaacatttctcagtcaagcaaatgaa
ttcttggtacttattttaaatcatagcttgggtttctttactttgtGTAT
ATGTATGTCAGGATGATAGCGGAACAGGAAtataatccatcaaaaatgaa
tttaaaacatatttcCAAGTTAGTTCAAGAAATGTCGTTTGATGTTTGAG
CTCTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTATTTTGCAGGCCATGGG
TCATGCTGTATCAtgatggacaaaataaaatcctccaAAAATTCCTCACA
ACAAGATTCAAAGCAAATCATTCCCATAAATTTTAAGTTTCTACAATGAC
AATATCCATTCTCTCCCTTGTATAAATTTCGTCTCAtgactgttcttttt
tcttgaggTAGAAATAAATCCAGACAAAATGTCCCTCTCAGGACTCAGCT
TCTTgtaaagttttccaagtttgttttctCTCTGTCTTCCTTTTCATCAT
AATCACAACAGTTTACAAAACATCAAACTGACACTAATAAAAATCCATTA
AAGTATTCTCAGGGTCAACAGAAGTCTATTTTCAACccattttaatcatc
aaaacTCCATAAAACTGCATGAAGAGCACAAAGGTTTAAAACCACTGTAA
ACAGTTTTTCCCGTGTCTCACATTCTAGACAGGCCTgttcataacaaaaa
aatcGGGATTTTCTAGTCAAGCTGAGCGCGTACtacttaggtaaagaaat
ctgtCAGTTTCTTTCGCTTAGCTTGCGAGCgtgcaaaatatatatttaaa
ggtatttcaaaatcaaaacaaatatggtagacaATCTAAATTGGATGTTA
ATAAAAATTGGCTGGCTGGATGAAGTTGCTTGACAATGAACAGTCAGTCT
TCTTAAAGATAAAGATTATCAGTTAAGAGTTAATCAAAGATAGAATAGCA
GTTTTAGCAGTTTTTTAACATAAGTTTTCAAACTAAAGTTTTGTATAAAT
TCTGTTGATGTTTTTGAGCATAGGCGGGTAGCGaggttttctcaaaatct
tcaagtttCAGTGGGGACTGGcggggaaataaaaattttgaagagctact
tagtggggatctagaaaaattagaagttttcagtggggattccCCGGAGG
CAAATTTAGCCCGTTTTTTtccccggggacaaaattttgggctttttttt
cagcgggtgggggtgcccagcaggtctgtgacacgggggtgtTAGTACGC
CGAaggctggccaatcaggccgaacctgcattgcagggaaaaatctccct
gcaggcgagttatctgcgccaagcgttaaacaagcagcaaaagtatcata
aactagactgtaaaaaaagtttaacgcttggattcccaggctattgAAAA
CcacattcacgcattcacgcattcacgcaaatcgCTGTGGGGGAGGCATG
TATACACATCTGCCAGGTTTGAAGAGTTAACAACAGTTTTTCGGACCAGT
ATgtttcactttatttttaagATCCTAAAGATTGATAGATTGTATTCACA
TTCAATTGAGTTTATTGTGAAATCTTTTTATATCTAGAGATGACGTGGTC
GACCACACTACAATGCTTCTACTTGCGAGCACTTGCTGATGTTGGCCTTC
ACGGTTTGACCACGGACATCATCACACAAGCTTTACTCGGTGATCGAAAT
AAGGACGGTTTAGCAAATTTCCTTCAAAGAGCTGGCGATGATAGTAAGTG
AAAAAGATGAGAAGTAAATTCTTCGGTGTAGGGTATGATTTGTATAAGGA
GAGTAGAATTGATTTGCACTGTAATCAGTATGAGTGTCATAAAAATACTA
TAGTACTATAATATACTGACTAgagtaagaaaaagtgaagcttttAAGAT
ATGTTTTTGGAATCAACTGATTGAGTCTGTTGCTTTCCTTGTTTTCATGT
TGCCTATTTTTTTAAACTGGCAATgagtttttctttcaatttggCGTTTG
TATACCACGCAGGTCACGCTTTGCCGATGGGAGAAGAGTGACTTCATTTC
TCATCCAAAAATCGATGTTTTAAACCTAATATTATTATGTGAAAAGAGGA
ATTCTACTGCATTGTTCTAATTAATATGACCATTTATAGCAAcagaaaaa
aagtgaatttttgaatcAATGTGCTTCTTCTTATAGAATGTAGTTGTGGT
GTACGTTACCTAGCACACCAATACCTTCATGACATTTATCTACACTACAA
GAAAGATTCCCTCAAAGAAGCCGTTCGAAATGCATTGTGGGAAACACTGG
AAAAGTTTCGGGACAAAGAAAAGAATCCCTTAGTCCTTTGCATCAACAAG
TCAGAGGAAAAGGTTGGATCGCTTTACAGTAATATCATTCAAGATTTTAC
TTTACATTGTTATTAGCTTTAAAAGCTCTTTGGTTTTAGTTGCTATTGCC
TTTTTTTCACATTGCTTGTGCAATAGGGTCTCATTTTACTAACCTACCAC
CTTGGATGACCATACAGTATGTTGGAACCCACTTATCTTCCCTGCTTTTC
TTTCCAGGAATCGTCAACATCGTTAGAGAACCTGGTCTTGAAGAAGATTT
CCACAAACCTTTCCATCATTTATTTACCTCTGGAGAATGATAAACGAaga
aaaacacccaaaaaagaaagaaagtgtCTACCTAATAAAACGGGCGCCAA
GGAAAGCCCGAGACACAATGTTAAACCAAAGTatgtaaaaaatgtgtatt
gtaTTATTGCTCAAATGATGATGCACAATGCAGTtgaatgtttatatttt
taagtGTGAGCTACACATAGTGATTTTTCGTAAACGACCGGGCTATGAAT
CTTACCCTTACCAATCTTTTAGGATAAATTCTCGTTCGTCCACGGACCAT
GTGTCGTCATCTTCGGGAGAAGAGGCCTGGTTGAACATGCAATGCATCGC
AAGCGATCAGTATGGAGCAGAAAACCATCAAACGGAAGAAAAGGTGATGG
AAATAAGAAACAATTTACGTGGCATGGGTCTCGACATCAAGGAAACGCTG
GAACTTCCTGTCACCGCTACACTGCCAGATCCTCAGGACATATCTCTCCA
TAAATTCGACAAACCTGATAAATCTTGGTATGAGTAAGAAATAGCTGGTC
CTTTTTGATGGTCCTATAATCATACGGCAAAGTCATTAGAAACTGTTAAA
AAAGTCTTTCTCAAACAAATTTGACCCCAAAATTCTAATAACTCCAATCA
CCATACAACTTAGAAGGAGATAATTATTTATTGCCCTGGTATCTAAATAT
TATACGACTTGTTTCTATGTAGCAATGCATTTTGAATTACTCGAATGCAT
TTTTAACGTCTACcttttaatgattttaatatTGCTTCGACGGTCTTGTG
GCCAGATCTAAAGAATGTTGCAACATATTATTCACTAAACTGAAAAGAAC
ATAATTATAAACAAACTGAAACCTGCTACTGCGAATTCTCTAAGTTTTTT
CCTTACCCTTAGGACAAAACAAGAGCTTTAAGAGAGAAAACTTTCGCGGA
ATAAATTCcccgaaaaatttttgttcaattgCGCCAACTAATTTTAGGAA
AGTATTTAGTTTAATGTAAGTGAAAATTGTAAAGCTGGAATTTGGCTTTC
TGTTTCATAAAAATTAGtgataatttgaaaaagaaaacaaatcaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006463XLOC_006463Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011533-exon-sc0000130-1491911889:150087..150403TCONS_00011533-exon-sc0000130-1491911889:150087..150403Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:150087..150403TCONS_00011533-exon-sc0000130-1510915933:150087..150403Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:150087..150403TCONS_00011533-exon-sc0000130-1575043694:150087..150403Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:153539..153569TCONS_00011533-exon-sc0000130-1491911889:153539..153569Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:153539..153569TCONS_00011533-exon-sc0000130-1510915933:153539..153569Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:153539..153569TCONS_00011533-exon-sc0000130-1575043694:153539..153569Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:154774..154848TCONS_00011533-exon-sc0000130-1491911889:154774..154848Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:154774..154848TCONS_00011533-exon-sc0000130-1510915933:154774..154848Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:154774..154848TCONS_00011533-exon-sc0000130-1575043694:154774..154848Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:155010..155115TCONS_00011533-exon-sc0000130-1491911889:155010..155115Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:155010..155115TCONS_00011533-exon-sc0000130-1510915933:155010..155115Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:155010..155115TCONS_00011533-exon-sc0000130-1575043694:155010..155115Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:155245..155308TCONS_00011533-exon-sc0000130-1491911889:155245..155308Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:155245..155308TCONS_00011533-exon-sc0000130-1510915933:155245..155308Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:155245..155308TCONS_00011533-exon-sc0000130-1575043694:155245..155308Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:155659..155758TCONS_00011533-exon-sc0000130-1491911889:155659..155758Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:155659..155758TCONS_00011533-exon-sc0000130-1510915933:155659..155758Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:155659..155758TCONS_00011533-exon-sc0000130-1575043694:155659..155758Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:155923..155982TCONS_00011533-exon-sc0000130-1491911889:155923..155982Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:155923..155982TCONS_00011533-exon-sc0000130-1510915933:155923..155982Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:155923..155982TCONS_00011533-exon-sc0000130-1575043694:155923..155982Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:156234..156279TCONS_00011533-exon-sc0000130-1491911889:156234..156279Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:156234..156279TCONS_00011533-exon-sc0000130-1510915933:156234..156279Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:156234..156279TCONS_00011533-exon-sc0000130-1575043694:156234..156279Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:156755..156828TCONS_00011533-exon-sc0000130-1491911889:156755..156828Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:156755..156828TCONS_00011533-exon-sc0000130-1510915933:156755..156828Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:156755..156828TCONS_00011533-exon-sc0000130-1575043694:156755..156828Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:157356..157466TCONS_00011533-exon-sc0000130-1491911889:157356..157466Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:157356..157466TCONS_00011533-exon-sc0000130-1510915933:157356..157466Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:157356..157466TCONS_00011533-exon-sc0000130-1575043694:157356..157466Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:157581..157747TCONS_00011533-exon-sc0000130-1491911889:157581..157747Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:157581..157747TCONS_00011533-exon-sc0000130-1510915933:157581..157747Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:157581..157747TCONS_00011533-exon-sc0000130-1575043694:157581..157747Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:158414..158526TCONS_00011533-exon-sc0000130-1491911889:158414..158526Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:158414..158526TCONS_00011533-exon-sc0000130-1510915933:158414..158526Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:158414..158526TCONS_00011533-exon-sc0000130-1575043694:158414..158526Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:163424..163579TCONS_00011533-exon-sc0000130-1491911889:163424..163579Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:163424..163579TCONS_00011533-exon-sc0000130-1510915933:163424..163579Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:163424..163579TCONS_00011533-exon-sc0000130-1575043694:163424..163579Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:164023..164198TCONS_00011533-exon-sc0000130-1491911889:164023..164198Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:164023..164198TCONS_00011533-exon-sc0000130-1510915933:164023..164198Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:164023..164198TCONS_00011533-exon-sc0000130-1575043694:164023..164198Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:164394..164566TCONS_00011533-exon-sc0000130-1491911889:164394..164566Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:164394..164566TCONS_00011533-exon-sc0000130-1510915933:164394..164566Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:164394..164566TCONS_00011533-exon-sc0000130-1575043694:164394..164566Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:164709..164829TCONS_00011533-exon-sc0000130-1491911889:164709..164829Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:164709..164829TCONS_00011533-exon-sc0000130-1510915933:164709..164829Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:164709..164829TCONS_00011533-exon-sc0000130-1575043694:164709..164829Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1491911889:165349..165533TCONS_00011533-exon-sc0000130-1491911889:165349..165533Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1510915933:165349..165533TCONS_00011533-exon-sc0000130-1510915933:165349..165533Clytia hemisphaericaexon
TCONS_00011533-exon-sc0000130-1575043694:165349..165533TCONS_00011533-exon-sc0000130-1575043694:165349..165533Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:150087..165533 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.47912	1.30258	0.447069	0.917927	0	0	0	0.519123	0	0	0	0.144782	0	0.160332	0	0	0	0	0	0	0	0	1.21511	0	0	0.589185
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011533 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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