TCONS_00011478 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011478
Unique NameTCONS_00011478
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1573

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011478 ID=TCONS_00011478|Name=TCONS_00011478|organism=Clytia hemisphaerica|type=transcript|length=1573bp
TTTCAGCGGGCGGATATGAAGTTTATACAATATTTAGTTTTGGTTTTCTG
TATGTGTTACACCACTACTTTCGATTTGACTGGAAAAACAGttcaacTTG
ATGTCCAAGATGGTAAGGAAGGGATTGTGGGAAATGACTTCATCACCAGC
TTTTTCACAGATTCACCACATAGTTTTATGAGAGTACAATTCTTCTTCAA
AGAACCTCTTCATCCGATCAACGTTTTTCGTTTGGAAACTACCAACACTG
ATGGGGAACCAGTATCGTTATCTCTAAAGATTTTGGATGATTTGGTGGTT
TTGGAAGCGAGAGCGAGTTCTACCAAGACTTCTAATCAAATATTGGGAAC
ACTGAAACAAAACAGCATTCAAAATTTGACCATACACTTTTTCAACGATC
GAATCTCATTGTACAATTTTTGTGATCTTCTTTCAACCAAAAAATTGGAT
CGAAACTTCCTTGATGTTTTGAAAGACATGAGATATGTATTGAAAACATT
TTACGGACAAACTAACCCAGAGCATCGCTCTTATGGAGAAATCAGTCGAT
TCGATTTATCAACATCATTAATGGATGAAATAGTTTACCAACACCATTGC
TACAAACAAAAAACGGTCAAAACGGATGGTTACAGAAAACCTCAAGCGAT
CGGGGAACATGCTGCATCATTCACGTCAGACTTTGAATCATCGTCTCATT
CTGAAGAAAATGCACCAGCAGAAAAAGAAGAAGGTCGCATACTGACACCT
TTGGATAAATTAAACCAAGCTCTTGAGCTGTTGAAAGAAGTCAAAGTTAA
CCAAGGGTTACAGgtttcaagCATCAAATTGATGAAGAATACTGTAAAAG
AAATTGAACAAGGAAATTTCGGTGAAGGAAACAGAGAAAATGGACCTCTT
CAGCAACTCATCAGAAACTCTCTACGTTTTGGTCGTCGAAATGCTTGTTC
ATCTAACCCTTGTTATTATTTGGTGCCATGTTTCAAGACGAATGATGAGG
CTGGATACCAGTGTGGTAAATGTCCTTTGGGTATGGAAGGTGATGGCAAG
ACTTGTCGCGATATTAATGAATGTTCATTAAATCCTTGTTCACCATTGAC
AACTTGTCAAAACCGTAACCCTGGTTACACTTGTACGCAATGTCCGCCTG
GTTTCCAAGGCAATGCAATCTTTGGACGTGGAAatgattttgccaaaaat
aataAACAGACATGTGTTGATGTAGACGAATGTACACAAACGCCAAGTGT
TTGCCCAAAACATACATTTTGTAATAATACCTATGGTGGATATTTTTGTA
CGTCTTGTGAATCCGGATACGCATTCAACAAGTTTGGGAAATGTGCGCAG
ATCCGAGAATGTCAAGGAGAACCAAGAAGTGCGCAAAATCCGTGCTCTGA
ACATGCAACTTGTTCTTATGAGTTGAACGACCTCAAAGGTGGTGATATAA
AAGCTTGTCAGtgTAACTTTGGGTATGCTGGTAACGGTTTTGAATGTGGA
AAAGATTCAGATTTCGATGGATTTCCGGATGAAGATTTGAATTGTGATCC
GAAAATTGCAAGTTGTATAAAGG
Run BLAST on NCBI

transcript from alignment at sc0000128:204619..219752-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011478 ID=TCONS_00011478|Name=TCONS_00011478|organism=Clytia hemisphaerica|type=transcript|length=15134bp|location=Sequence derived from alignment at sc0000128:204619..219752- (Clytia hemisphaerica)
TTTCAGCGGGCGGATATGAAGTTTATACAATATTTAGTTTTGGTTTTCTG
TATGTGTTACACCACTACTTTCGATTTGACTGGAAAAACAGGTATATTGA
TTTTACCATTTATTGACTTTTTCTTCTTCTTGCGCTTAGACAGCAAAATG
TCACTAAAAAGAGAAAACGGAGGTTAGGTCAGGGCAGAGTAAGCAGTTGC
GGAGATGTTTACAGTGTTTGTTCCAAACTCTACCGCTGCTTTCTTTCCGT
CTACCTCCCGCTACGGCTGTAAACTCCGTGCATATATATTTTTCCACTTT
ACTATCTCTCTAACGGACGATAATTTAGTTCTCGAGTTGCAGAGTTAAGA
AACTTTCGATACTTGACGACAAAGAACGGGGTTATTTCAGCCTTTGTTAG
CGCCAAGGCACTTTTCTACAGGGCTAAGTCTAATGCAAGGTGGACATGTC
CTGCAAAAAGTATCACAAGCACAAAAAAAAGAAGTAAAGATGACACTTTT
TGAACCAAGAAAAATCTCATTACAGTGGTGTCTCTATAACTCGAGCACGT
TCAGGAAACTTAAATTTGTTCGAGTTATGGAGATTGATTTTGAAGGCATT
GTTCATTGAAGGGACGATTAAACTTGTTCGGAGATGTTTGGGTAATAGAG
GTTCGAGTTCTAGAGATTCAACTGTAATCGAAGAATACGACGCCTGTGCT
TATTTTCCTCCTTCGATAAAAAGCAAAAAGGATCCTGCTCTTTAAACAAT
TCTCCAAGAATCCCCCTGTAGTATCATAAAATAGATATGTCTTATCCGGG
AAAAAGGTTGGAATTTATTTTATAAAGGTGTCTGGATTTTGCAATGACAT
AGGTGTCTTTTTCATAAAAGACTGGAACAGGGTATCATAACCAACTCTTC
CTATTTTTTTTTTTAGTTCAACTTGATGTCCAAGATGGTAAGGAAGGGAT
TGTGGGAAATGACTTCATCACCAGCTTTTTCACAGATTCACCACATAGTT
TTATGAGAGTACAATTCTTCTTCAAAGAACCTCTTCATCCGATCAACGTT
TTTCGTTTGGAAACTACCAACACTGATGGTGAGTTTGCCTAGAAGACTTT
TCCATTTATATCAGACCATGCTCGAACGTGACGGTTCCGTTTCGCTCCAA
AACGAAATGAAGCCATTATATTAGTTAGAAGTGACGCTGACACTTAAATG
TAACCAATAGAACGGCTTCATTTCGTCTAGGAGCGAAACGGAACCGTCAC
GTTCGAACATGGTCTCAATATACGTATCAACCATCAACCTTTAGATCACG
ATCACATACTACGGTTCCGTTTCCCTCCGAAACAAAATGAAGCCATTCTG
TTGGTTAAATTCAATATTTACATCACTTCTAACCAATAGAATGGCTTCAT
TTTGTTTCGGAGTGAAACGGAACCGTTACGTGAGACAACATGATCTCAAA
ACGTGAGGAGGCTGGGCTCGATTTTACCATGAGGAATGACATCAAAATGT
CTGAAACCATTACCTTGGCATGCCCAAAGATAAACAATTTAAATTCAATT
TCTTGTAAATTCACTACCAGTCACCTTATATCTGGCATATAGAGGTAGCT
GTTAAAATATCTATTTGGGGAATTCGCCTCCCTAATTTACCCCAATTTTG
GTCGACCCACCATGCTTCGAAGACTACTGAATCATCCATCTATATAAGGG
TTATGTACGTGACATCTAGTAAACCGCAACTCGCTTTTCAAAACCAATCT
TCTCAATAAGTTCTTATAGCTTTGGTTAAATGATGTCTTTACTGTCACAC
TTTCTGGTCATATTTGATCCTTTAAGTAATCAGTAATCGAAATCTTTTTA
TCTGAAATTGTTATACTACTCTTCTCGTTTGTATATTTGCCAAGTTTTCG
AGTCTTTTCTTTGGCTAGATCGAAAGTTATGGACTGATGTTACCGACATG
AAAACGGATTCTATAATAGTTCTCTACCCGAGCCATTTAGGACCCCCTAC
TCGCGACCCTCTGGAGACCAAAAGCCCCCTTAAAACAATATTTACCTCTT
TAATCCATAAACACGAAAATTGTTTGATAATACGGATTTTCCAGAGGGAT
GCTGAAAAGACGTGCTCTAAGATTCTTCAGGTCCTGATCTCCTTATACGT
TTTCAAAGAGCCTGAAGCTAATTTACATTTGAATAAAATTTTTCAGGGGA
ACCAGTATCGTTATCTCTAAAGATTTTGGATGATTTGGTGGTTTTGGAAG
CGAGAGCGAGTTCTACCAAGACTTCTAATCAAATATTGGGAAGTAAGTAT
CTTTCAAAATCTTGTGAGATTCCGAAATGCGTCTCATTTTGCGCGATCAT
TGACAAGGAAATACTTCGTCCAAGACAATCATTAGTTTAGAGGATCGCAA
TCTAGAATCCAGGGTCATTTGCATCGCTTTGAGACCAAGAATTCTCTTCC
AATTACGAAAAGTTTTTTATTTGACTTTCCAGGTTGAGGGGACCAATCTT
TTAGTTCGAATTACAGAAAGATGCGAGGTTCGAATTAGAGAGTGTTGACT
GTATTACTCGGATGTGATGCAATCTATCGTGAGCGCTGTCGTCAACAAAC
AAGCTAAGGACCTGGGTACGAGTTTGTAGAAAGTATAATAACACCTTACT
AAAGAAAGGATATATCAAAATATCAAGTAGACACCCAACTTAAATTTCAA
AATTATGTTTCTATTTTCAGCACTGAAACAAAACAGCATTCAAAATTTGA
CCATACACTTTTTCAACGATCGAATCTCATTGTACAATTTTTGTGATCTT
CTTTCAACCAAAAAATTGGATCGAAACTTCCTTGATGTTTTGAAAGACAT
GAGATATGTATTGAAAACATTTTACGGACAAACTAACCCAGAGCATCGCT
CTTATGTAAGGATGAGTTCGCCATTTCCCCCGGAGGAGGGGGGTACTTAG
GTAAATGGAGGGTACGGGTATGTGCTGCCCTTACGGGTACCTTTTTTGGA
CTTCCAAAATCCCACTAACGGTTGGGAAAATAGGAAGATTTAAACTTTTT
TCCTCTTTTTTAGTTCGGCTAAGGGTCCGAGGGTGGAAAGTCGGGCTACA
CGTCAGCTTGCAACCCTAGTACCCCCTGGGGCCATTCATATTTTCTCTCG
TTTCTCTCATTAAATTTAATTTCCTAAATTTTTCATCTAGTGCCACTCCT
TCAAATCCAATCATAAACCGTGATTTTTTTTCGAATTTGAGACCATGTTC
AGACGTTACGGTTTCGTATCACTCCGGTATAGTATTTGTTTCGGGAAGGA
AGTGTTCATACTGATTTTGGAACGTTTCGGAGCAAGAAAACGGAGCAGTT
CCGTTCCGATGAAAATAGTGGAGCGAAACCGTTTTGATCTGTTTTGCTTT
GTAACGTCTTCTTTCTTGACGTTTCAAATTTTGACGTTCACAAGTGGGAC
CATTTCGTTCCGAAACGGCACGGAACCAATATGAACACTCTCGATCTGTA
ACAGAAACCATATCGGAGCAGATACGGAACCGTAACGTCTGGACATGGTC
TAACAGTGGTTTGAATTACGGAGAGTTATTTCGAATTTTAGAAAGGGTAA
GCTGTATTTCATTTCAATCCCGGCCTCATAAAAACAATGCAGTCCAAGAT
TTACTTGGGGTATTATACGTATTCATAATAAATTTATTAAATTTGAAACT
TAACTATTTGTTTTTGTCTTGATACAAAGGGAGAAATCAGTCGATTCGAT
TTATCAACATCATTAATGGATGAAATAGTTTACCAACACCATTGCTACAA
ACAAAGTAAGTTAAGAGATGTTGCCAAAAGACACCCTTCTACTTTAATGG
GATAAATTTTCGCGGGGATTAAATTTCGCGGTTGAGCTCATCCGCGAAAT
TTTAAGATTTCGCGGGGATTAATTTTCGCGGATGAGGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAGAGGGTGTTTTGGAATAGGGCGAGGAGATATGTATT
ACAACTATCAAAAGTTGAATTTGAACTTCCATGGTGCGGAGCTAAATTTT
CACAGCCTATTTGGGTAAAAAAGCGGAAGAGAAATTCGGGATAAGAAAAC
TAAATTGAAAATAAATTCTTTTGTTTTCCGTTTTCCCTCCTTTTCTTACA
TATCCTTTTAAATGTTTAATTTCAAGCCAGTTGGATTACCCCTGGATTAC
CCTCTTGCATTGAAAAGCTTTTAACAATAAGCGATCACTTTAGATAAAAA
TTTTTCCAATACCTCTTCCAAGTTTGTAAATTTGTGAAGAAAATTTTGAG
GAAAACGATTTTTTGCTAACAAGCATATCGAGGATTTGACCTTTTTCGAG
GGTTGCGTGCCCTCAAAAAAAAATAAAAAACGATAAAAATAGAAATTTCG
CGGATTGTAAAAAAAAATCAAATTTTTCGCGGAAACTAATTTTCGCGGAT
GGGCCTTTTTCAAATTTCCAATGGGACTTATTTTCACGGATGACACCCGA
ATCCGCGAAATCCGCGAAAATTAATCCCCGCGAAAATTTATCCCATTAAA
GTATGTCACAGACCCGTTGTCACCCCTGCTCCACTGCAAAGTTTTGCAAA
AATTCGTCCCGGGTAGCAAAAATACTCTACGATTTCAGCCCTATTGGAGA
ATGGACTTTGATTTCATCCCCATTTTAAATTTAATGGAAAATATTTTAAT
TCAAAACCACACCCACTAGATTTTTTGAGCTGTGATCAAAAGAATCCCCG
ATTTTTATGCCCGATGTGAGAAAAAGTTCCACTGGGGCTGCGAGTAGTAA
TTCATCAGCTAAACAACTTCTTGTGTCTTCAATTATCTGGAAAGAGATAT
ATCATAGCGTAATCTGAATCATCTCTGAATGTTTTTCTGTGCCAACAATG
TCAATGCAGTTGAAAGTTGACGTTCATTAAAACTTTTTTGGTCAATGTTA
ATCGAACTGATGTCAAATTTCACTTGTTTTTAGAAACGGTCAAAACGGAT
GGTTACAGAAAACCTCAAGCGATCGGTAAGGCATATTAGCTTCACATTGA
AATCAACGAAATCTTACTTTTCGTCTTTCAGCACTTTTGCGTCGTAGTCT
CAATCCCGCTAGAAATAACGCCTTTAGCTTGGTATTTAATTGCTCTGTAG
CTTTCTACTGTGATTCTGATCGAACACCTCAAAATAAAATTTGACCTCTT
GGAATTTCATTGAAATTTCCACTTTCAGAGGCCCTCAGTTTTGCTTCAAA
CGTCGTATACACCAATCGACGCCGAATTTCACGTCGATTTCAAAAATGTA
GTAAAAAAGCAAACAAAAGCTTCTCTATCAAAAGTTATGGACCTTTGAAG
TACTACCGGTTTTGTCACCCTCCTCTTTATGAGTACATTGTAGTTGGGCC
GGTGTAAAGGCCGGCGCAAATGAATCCAACATTTGATCCAACATTTCAAA
TTCATTGTTGGACGAAATGTTGGACGAAAAGTCACGTGGAAAAATTCGAA
AAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGGAAAAATTCGAAAA
GTTGCATGAAAAGTCATTTGCGCAAAAACGTCAAACATTTTCATCCAACA
TGATTACGCAAATGCATCCAACATTGAAGCCAACATAAAAGTGACGTAAA
TCTTATAAAAAATGTTGGATGAAAAGTTTGACGGCGATCAAACTTCATCC
AACATNCTGATCGAACACCTCAAAATAAAATTTGACCTCTTGGAATTTCA
TTGACATTTCCACTTTCAGAGGCCCTCAGTTTTGCTTCAAACGTCGTATA
CACCAATCGACGCCGAATTTTACGTCGATTTCAAAAATGTAGTAAAAAAG
CAAAGAAAAGCTTCTCTATCAAAGGTTATGAACCTTTGAAGTACTACCGG
TATTTTCACCCTTCTCTTTATGAGTACATTGTAGTTGGCAATGAATGTGT
AATATCAAGGTGCGATAGAAGAACGAAGAGAGATAATTGTTATAGTTAGT
TAACTTTTTCAGGGGAACATGCTGCATCATTCACGTCAGACTTTGAATCA
TCGTCTCATTCTGAAGAAAATGCACCAGCAGAAAAAGAAGAAGGTCGCAT
ACTGACACCTTTGGATAAATTAAACCAAGCTCTTGAGCTGTTGAAAGAAG
TCAAAGTTAACCAAGGGTTACAGGTAGAAATAATAAGTGTCAAATATCAA
CTACTTGAATATACCTTTCAATAATTACCTTCATTTTTCCACCACCTAGC
GTTAATAGCTCTTTTGGAACCTGCAATTGAGTTTTAAGGCTAAAAGTGTT
CTCAAAATTTATTTATTTTCAGCATTCTATAAGTATTTTTGTGTAACTTT
CTAATAAAATGCAATTTTTAGAGCTCTAAAGCTTTAAAGTGTTCTTAAAC
TTTTTATATAAAAAAACGGTTGTTAGAATATTTATGGTTTATTGACTACT
ACCAGTTAGCGTAGACAGGAGGGGCGCAAAATTTGTGTAGGAGAGCAGAT
TTTCACGACACAGTAGTAATTAATCTATTCATAATATAAAAAGATAATTA
CCTTGTCATTAAAAATCTGCTCTCCTATACAAATTTTGCGCCCCTCTTGC
CTACGCTACTGACTACTATAACAAAAACTACTCTCAAGACCTGAATCTCG
TTATTTCAACACTTTTTTTAGGTTTCAAGCATCAAATTGATGAAGAATAC
TGTAAAAGAAATTGAACAAGGAAATTTCGGTATGTCCTCCATATGTTCGT
GTCAATTCTTGTTCTCCATATCCGGTCATATTTTTTATTATATGCGAAGT
TGGGAGAAGTATACCACAGTGTACTTTCTATTATTCAACGAATCAAGGCA
TTCTCCAGCAGCAAAAGGGTATCCATGTACGAGAATTCATGAAAGCAAAG
GGTCTTTTAATATAAAAAGTGTTTTTGAGATTTGTTCATAAAGTTCATCA
ATCAGAGGCTTATAGCNCAAAGTTAACCAAGGGTTACAGGTAGAAATAAT
AAGTGTCAAATATCAACTACTTGAATATACCTTTCAATAATTACCTTCAT
TTTTCCACCACCTAGCGTTAATAGCTCTTTTGGAACCTGCAATTGAGTTT
TAAGGCTAAAAGTGTTCTCAAAATTTATTTATTTTCAGCATTCTATAAGT
ATTTTTGTGTAACTTTCTAATAAAATGCAATTTTTAGAGCTCTAAAGCTT
TAAAGTGTTCTTAAACTTTTTATATAAAAAAACGGTTGTTAGAATATTTA
TGGTTTATTGACTACTACCAGTTAGCGTAGACAGGAGGGGCGCAAAATTT
GTGTAGGAGAGCAGATTTTCACGACACAGTAGTAATTAATCTATTCATAA
TATAAAAAGATAATTACCGTGTCATTAAAAATCTGCTCTCCTATACAAAT
TTTGCGCCCCTCTTGCCTACGCTACTGACTACTATAACAAAAACTACTCT
CAAGACCTGAATCTCGTTATTTCAACACTTTTTTTAGGTTTCAAGCATCA
AATTGATGAAGAATACTGTAAAAGAAATTGAACAAGGAAATTTCGGTATG
TCCTCCATATGTTCGTGTCAATTCTTGTTCTCCATATCCGGTCATATTTT
TTATTATATGCGAAGTTGGGAGAAGTATACCACAGTGTACTTTCTATTAT
TCAACGAATCAAGGCATTCTCCAGCAGCAAAAGGGTATCCATGTACGAGA
ATTCATGAAAGCAAAGGGTCTTTTAATATAAAAAGTGTTTTTGAGATTTG
TTCATAAAGTTCATCAATCAGAGGCTTATAGCAGAGAGATTCGATTTATA
GAAATAATTTTAGGAGAGTGTTCCCGGCAGTGGCGTTGTGGCAGGGGGGC
CGGGGGGGCATGCCCCCCCCCCCAGCGGAGCTTTTTTGAAGGGGCGCCAA
AAGAAATTTTTTTAAACGCCCCAATCTTAAAAATCATACTTTATACGCCT
TAAATTACGCCCAGGACCAATTTTACTGAGATAATTTTAAAATACTTGCA
ATTTTTTTCGCTCGCTTCGCTCGCAATACAGTTAATTGGTAACTTCTTTG
CAATCTAGCTAATTTTAATTTTTTTTGTGCATAATATAGCATTATTAAAT
GAACTGCGCCCCAAGACCAATATGCTGACAACAATATTGAAATCATAAAA
CATCAGTTTTTTCGCTCACTTCGCTCACATAACACATTGTTTCTTTAAGT
TCCTTTTCACTCTAGCAAGTTTCAAATTTGTCTATTTTTATTTAGTGATT
TAGGGTATCTTGGCAGTTGATTTAAAAAAAAATTTTCTACCGGGTGCGCC
ACAAAAAAGTTTCTCTCTTTAAAACTAATTTTCTAGAAATCTAAAAAATT
TAAAAGAACCATTCCAATTTCATTGGAAAGAAGAAAAATAAACTTAAATT
TTGATGGGTCATTTATTAAAATCGATTCATTAAAGTCAATTCACGATAAG
TGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTCCAATC
TTTATAAATTTGGTATCATTTGAAAGATATTAGTGAGTGGAACAATTTGA
AGTAAAAAAATCTTTAAAAAAATTCTAAAAATGAAGATGAAAATGAAGAA
GAAAAAAAAGAAGATCTTGTAGAAAAGTGCTATAACTTTCATTTTTACTG
GAGAGATTCCTTGATCTTAGGAGATCATCACTGTGAAAAAGTTTTATTAA
AATATTTATTCAATATAAAGTTATGATACAAAGTTAATAAGTGATTGACC
CCAAAAAACAGCAAAAAATTGCAGAAAACAGCGTTTTTAGACGTCAATGA
CGTTATAACTTTGTTTGATATCTTTTGACTGATTGGTTATTTTTGAGAAT
TCTTTTCACAGTGATGACGTTCGATGATCAAGAATTCACTTCAGTGAAAA
TGATAGTTATAGCACTTTTCTACAAGATCTTCATTTTTTTCTTCTTCATT
TTCATCTTCATTTTTAGAATTTTTTCAAAGATATTTTTATTTCAAATTGT
TCCACTCACTAATATCTATCCAATGATACCAAATTTATAAAGATTGAAGA
ATTCCTTCAAAAGTTATAAGTAAAAGAAAAAAGAGTGCACACTTATCGTG
AATAGACTTTAGATCAAAAGTTATGCTCAATTGAATGAAAAAGTTGATTT
CAGAAAGTGCTCGAAAACGTTGAAAATCGACCTATCAAATTTTTATTTCA
AAATTGGCAATCACAATGGCCTTTACACGATTAAGAGCATTTTTGCAGTA
ACTAAACACATAAATTTCGAAACTGAAAGGTCGAAAGTGTTTTAAAATCT
TCATCAAAATCACTTTAATTTACTTTTACCGATATTCTTCTTAGATTTTT
GGTTTTAGATTGGATAAAGTCTATGTAAGGCTGAATGTACCTCGAAACTT
ATATTTGGTGTATTTTTATGAATTTTACCACGTTTTTTGGCCTTTTTCGA
CGAAGTTTCTGCCTTTTAGTGAAATTCAGCCTTCTTTATATAACAAAAGG
TCATTCATAGTTCGGAAGGGGGTCACTACCCCCCCTACCCTAGAGCTACC
CCCCCCCCCCCCCCCTTTCTAAAGGGGGGGGGGGAGCTCTAGGGTAGGGG
GGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGG
GGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGA
GCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTC
TAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGG
GTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAG
GGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGG
GGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGG
GGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAG
CTCTAGGGGAGGGGGGGGAGGGACCCCCTTCCGAACTTTAAAAAACCTTT
TTTTTTTTAAAAAAAAAAAGGTTTTTTAAAGTTCGGAAGGGGGTCACTTC
CCCCCCTCCCCTAGAGCTCCCCCCCCCCCTTTATAAAGGGGGGGGTGCGA
ACTATGTCATTTATACCGCTAATTATCATTTTTAATGACTGCGAGACAAA
AATAATGATGTATTAAGTAATTATGCTTCTTTTTAATTTGATAGGTCGAT
TTTTAACGTTTTTGAGCACTTTCAGACAGTAACTTTTTTGTTTAATTGAG
CATAACTTTTTATCTAATGAATCAAATTTAATAAATGACCCATCAAAATT
TAAGTTTATCTTTCTTCTTTCCAATGAAATAGGAACGGTTCTTCTAAAAT
TTTTAGATTTTGAGAAAATTAGTTTTAAAGAGAGAAACTTTTTTGTGGCG
CACCCGGTAGTCGGCCCAAACCATGTTGGGGCCTGTTTTTCCCTTTTCCG
TTCATCAAAGATAAAGTTACTCTTTTCCACTAAATATTTCCTTCCTCTTT
ATGCCTAAGCAAATGAATTTAGTGAAAGTTTAGAAAATGGTGGGTGGGGA
CACCACTTTGGAAAATTGGAGAGGGGGGCGCCATTTAAAAAAATTGACTT
TGGCCCCTCCAGAAAAATTTTCCCACAACGCCACTGGTGGAGTGTTCCTT
CTTAACGGGAACTGAAAAACTTCGCATTTTAATAAAAGAGATTTGAGTAA
TAGAAGTTCGAATAAGTGTTACTGCACTGTGGAACGTATTTCATTTTTAC
ACAAATGTTTTCATAAGGTGAAGGAAACAGAGAAAATGGACCTCTTCAGC
AACTCATCAGAAACTCTCTACGTTTTGGTCGTCGAAATGCTTGTTCATCT
AACCCTTGTTATTATTTGGTGCCATGTTTCAAGACGAATGATGAGGCTGG
ATACCAGTGTGGTAAATGTCCTTTGGGTATGGAAGGTGATGGCAAGACTT
GTCGCGATATTAATGAAGTAAGTCTATAAATTGTACAGTAAAATCAATCA
AAATATAAAAGCCGCATTCTTTTTCACCGTTCAACATATAAATTGTACAG
TAGATTGCATAGGATTCGCATATCTTCGGAGGGAACTCGATATAAAAACG
GTCGTGTGTTCGGCCCAAAGTTAAGCCTGTAAATTTGAACCCAGTGAAGA
GAAAATCTAGCCAAATTTGAGTAAATTTTACTTTTGGTAAAATACCTTAA
GTGACCGACGTCGAATTTTCAGGCATTTTCAACAATCTGAACAGCTCTGC
AGCACAGACCCGGTGGAGCATCCACCCCACTGAAAAGAAATTGCCAAAAA
TCGAACAAATACCCTGAAATTCAATCTCACTGTGCCCTATGGTTTTATTG
GGAATGAAGATTGAGATTTCGATAAATATTTTCATATCCCCAATGAGTGA
GAAATATCCAATGGGACAGAGGTATACTTAATTTTCATTATTTTGTTATA
CTTTCAGTGTTCATTAAATCCTTGTTCACCATTGACAACTTGTCAAAACC
GTAACCCTGGTTACACTTGTACGCAATGTCCGCCTGGTTTCCAAGGCAAT
GCAATCTTTGGACGTGGAAATGATTTTGCCAAAAATAATAAACAGGTACA
ACCATAGGATTTGAAGACACTTCTTTCCTGCATAGACGAACATTTCCCGG
GGGGTATTTTTATATTTTTCCAGTAGGTCAAAGGTTATTCTAAAATTTCA
AGGGGGTCCACCCCTTACTTTTAAGGTAGGAAAATAATTTTTCAAGACTT
CTTTTGCAAATTTTGCCATTTTCCAGGGGGTATTACCACATTTCTAAAAA
TCTTTTTTTGCCTTAAAAAGGTTTGTCCACCCCCACCCCTGTATGGAAAT
TTAATGGACAACCCATTTGGCAATATACTGCTTATTAAACTGTAGTATAA
TAATATTTTCCAAATTCCCTATCTTGAAAAAGGTTATCGCAACGTTTGTG
CATTTGATTGTTCTTTGAGACGTGCGACTGGGAAGTATAATATTCTTCAA
AGTGCTAATCTTGAGAAAGGTTATGGCAGCAGTACAAACATGCATTTGAT
TGTTCTTTCAGACATGTGTTGATGTAGACGAATGTACACAAACGCCAAGT
GTTTGCCCAAAACATACATTTTGTAATAATACCTATGTAAGTTATTGGTG
AACTAACAAGTGTTTGTCCAAAACATACATTTTGTAATAATACCTATGTA
AGTCATTGGTGAACTAATTATCATAATCGCTAATTATGGTTATTTGGTCT
AATGTCGACATTCCTCTTCTTATTTCGACATCCTTCTTTAGATATAGGAA
TAATAGGAAGGTCGGAATTGCTGATTGAAACTAATTTTCTCTGCTTAGCA
ATCAGTTGAGGAGTCCATCAGTGATTCCGGCCTTTCTATTATTCCTATCT
CTAAAGAAGGTTGTTGAAATTAGAAGAGGGATGTCGATATTCGACCAACT
TACGGTAATTATTATTAAAGCGAAACCGTAGTGTAAAGGTAAGAGAGGAT
TCCAATCCAGTATCAAAGGCTTCAAAATGGGACTTGATGTTTTTCTGCTT
AATGCTCAGAATGATCAAGGGTGACTTTGTAAGTCATTGGTGAACTATTA
ATTATCATATTCTCTGATTATTATTAAAGCAAACCGTAGTGTAAGTAGAG
GATTCGGTTTTCTAAGCAATAGGGGAGAACGATAGAGGGTTAATGAAACA
ATCCATGGAGAAAGATGGCGCCCGCTCGGGTATATAGCTAAGGAGGCTGC
GGGTCACCACAGCAAGACTTACTATTTAATTATTACTTCCTTTTCTTTTT
GAGAGACTTTAAAAGAATTTGGCTTACATAATTACACGTTTTTTAAGAGA
AAGTTTATAAGAAGAATACGAAGCTAACTTATTGCCAATTACCAAGAACA
AATTACGAATAATCGCAGCCTCGCTTTAAAAAAATGGCTAATGAAATGCT
GCTATAAAGCTCATTTTAAACCGATAAGGAAATACAGTGCCAAGAGAAAT
TAAGAACATCCAAGTATGAAAATAACGAGATAAAACAGCCCCAACCAAAA
TTTACTATTTCTATTTCTACTTATATTTTTATTTGATTGAGTCACAGGAG
GCTTCGAGGCCTATTTTCGCAACTATAGACGCTTTCAATTAGCGCCCCGT
CAGCACCTTAGACTGACTACCTAACTCCCCTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCCCCCCCCCCCCCCACATGGCATGGGTTGACCCGGGCGA
AAGTTCATTCACTTGCCAAGTGAGCCGCTGCGAGTGGGAATCGAACCTCA
GTCGCCTGTGCAGCAAGCAAGGTCAATGACTACTATATCACAGCGCCTTG
GTTCCTATATAAAAGGGTGTATGTCATTTCTATTTTGTCTCAATGAAAAA
ATCGAACAATACCGTAGAAATTATAAAAACCTTAGCAATCTTTTACTATT
TTTTAGGGTGGATATTTTTGTACGTCTTGTGAATCCGGATACGCATTCAA
CAAGTTTGGGAAATGTGCGCAGATCCGAGAATGTCAAGGAGAACCAAGAA
GTGCGCAAAATCCGTGCTCTGAACATGCAACTTGTTCTTATGAGTTGAAC
GACCTCAAAGGTGGTGATATAAAAGCTTGTCAGGTATATAGTAGAGAACA
GTTTTCAGATGTACGTTTTTTTTCTTCTGTTTTTTTCTTCTGGAGAATTT
AGTCGCCAGCTTCAAGCAGAGATGGCCAAGCGGGGAAAGGCTTCAGCACC
TCAAATCTCAAATCGCGGTTCGAATCTCCGCTCCTTCTAATGTTCCGTTC
AGTTTATAAAGCTGAGTCAGCTGGCCGTAAACCCCGTGTAAAAAAGACCG
AAGACCGCCTAGAATGTTGGGCTCTACGTAAAAAATATTGACTCTAAGCT
TTAGACACTTGACCAGATCCGCGACCAGTGAATTATGATAACGATATTCT
GTAATTCTAACCTCAATCTTAGATCTGTATTTGCTGATGAAAAAAAGGTG
TTCGTAGATACGACCATATGCTAAAAAATGTTATTATTATAAATAGCTAA
ACAATGTTATCGCCTGTAAAGCTTTATTGGCGAGCAGGAAAATAAGTTGC
GGGAGGTTGAAGCCGTTCATGGCTGTAGAAAACAATTCTGTAAAAAATAC
TCCCGTTTTTGCGCTTGCTCCTTAACTGGCTATTATTAACTCGTGGATGA
AACTCGGGATGAAATTAAAAAGTCTGGTATTTCACGATTGTACTTAACTG
AACTCTATAAAAAACATATAATCGAATTGGAAATTAAACAAAGTTAAATT
CAAGTTAATTCAATATTTTTAGTGTAACTTTGGGTATGCTGGTAACGGTT
TTGAATGTGGAAAAGATTCAGATTTCGATGGATTTCCGGATGAAGATTTG
AATTGTGATCCGAAAATTGCAAGTTGTATAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006432XLOC_006432Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011478-exon-sc0000128-1575043694:219662..219752TCONS_00011478-exon-sc0000128-1575043694:219662..219752Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:218675..218836TCONS_00011478-exon-sc0000128-1575043694:218675..218836Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:217461..217556TCONS_00011478-exon-sc0000128-1575043694:217461..217556Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:216848..217032TCONS_00011478-exon-sc0000128-1575043694:216848..217032Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:215948..216023TCONS_00011478-exon-sc0000128-1575043694:215948..216023Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:214528..214569TCONS_00011478-exon-sc0000128-1575043694:214528..214569Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:213330..213490TCONS_00011478-exon-sc0000128-1575043694:213330..213490Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:212774..212831TCONS_00011478-exon-sc0000128-1575043694:212774..212831Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:208486..208685TCONS_00011478-exon-sc0000128-1575043694:208486..208685Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:207858..207995TCONS_00011478-exon-sc0000128-1575043694:207858..207995Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:207317..207391TCONS_00011478-exon-sc0000128-1575043694:207317..207391Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:205420..205596TCONS_00011478-exon-sc0000128-1575043694:205420..205596Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1575043694:204619..204730TCONS_00011478-exon-sc0000128-1575043694:204619..204730Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:219662..219752TCONS_00011478-exon-sc0000128-1510915933:219662..219752Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:218675..218836TCONS_00011478-exon-sc0000128-1510915933:218675..218836Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:217461..217556TCONS_00011478-exon-sc0000128-1510915933:217461..217556Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:216848..217032TCONS_00011478-exon-sc0000128-1510915933:216848..217032Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:215948..216023TCONS_00011478-exon-sc0000128-1510915933:215948..216023Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:214528..214569TCONS_00011478-exon-sc0000128-1510915933:214528..214569Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:213330..213490TCONS_00011478-exon-sc0000128-1510915933:213330..213490Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:212774..212831TCONS_00011478-exon-sc0000128-1510915933:212774..212831Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:208486..208685TCONS_00011478-exon-sc0000128-1510915933:208486..208685Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:207858..207995TCONS_00011478-exon-sc0000128-1510915933:207858..207995Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:207317..207391TCONS_00011478-exon-sc0000128-1510915933:207317..207391Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:205420..205596TCONS_00011478-exon-sc0000128-1510915933:205420..205596Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1510915933:204619..204730TCONS_00011478-exon-sc0000128-1510915933:204619..204730Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:219662..219752TCONS_00011478-exon-sc0000128-1491911889:219662..219752Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:218675..218836TCONS_00011478-exon-sc0000128-1491911889:218675..218836Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:217461..217556TCONS_00011478-exon-sc0000128-1491911889:217461..217556Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:216848..217032TCONS_00011478-exon-sc0000128-1491911889:216848..217032Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:215948..216023TCONS_00011478-exon-sc0000128-1491911889:215948..216023Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:214528..214569TCONS_00011478-exon-sc0000128-1491911889:214528..214569Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:213330..213490TCONS_00011478-exon-sc0000128-1491911889:213330..213490Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:212774..212831TCONS_00011478-exon-sc0000128-1491911889:212774..212831Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:208486..208685TCONS_00011478-exon-sc0000128-1491911889:208486..208685Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:207858..207995TCONS_00011478-exon-sc0000128-1491911889:207858..207995Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:207317..207391TCONS_00011478-exon-sc0000128-1491911889:207317..207391Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:205420..205596TCONS_00011478-exon-sc0000128-1491911889:205420..205596Clytia hemisphaericaexon
TCONS_00011478-exon-sc0000128-1491911889:204619..204730TCONS_00011478-exon-sc0000128-1491911889:204619..204730Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:204619..219752 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.212241	0.17951	0.139127	0.049496	0.97336	0.690426	0.259108	0.305235	0.0941323	0.0816186	0.179719	0.16367	0.118867	0.0462918	0.162463	0.240759	3.41298	0.5243	0.0276493	0.057866	3.64053	3.30305	1.37184	1.9446	2.15727	1.99385	0.137854	0.0707965	0.0742972	0.101057
Blast
[Close]
BLAST of TCONS_00011478 vs. Swiss-Prot (Human)
Match: TSP3 (Thrombospondin-3 OS=Homo sapiens GN=THBS3 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.936e-46
Identity = 99/271 (36.53%), Postives = 143/271 (52.77%), Query Frame = 1 
Query:  739 ILTPLDKLNQALELLKEVKVNQGLQVSSIKLMKNTVKEIEQGNFGEGNRENGPLQQLIRNSLRFGRRNACSSNPCYYLVPCFKTNDEAGYQCGKCPLGMEGDGKTCRDINECS-LNPCSPLTTCQNRNPGYTCTQCPPGFQGNAIFGRGNDFAKNNKQTCVDVDECTQ-TPSVCPKHTFCNNTYGGYFCTSCESGYAFNKFGKCAQIRECQGEPRSAQNPCSEHATCSYELNDLKGGDIKACQCNFGYAGNGFECGKDSDFDGFPDEDLNC 1545
            ++T L   NQ   +L E++ +   QV  + L++NT+ E +   F E                   +R+ CS NPC+  V C +  +  GY+CG CP G++G+G  C DINEC+  +PC P ++C N  PG+ C  CP G++G  + G G D+A+ +KQ C D+DEC       C  ++ C NT G + C  C  G+  N+   C   R C      A +PC  HA C +E N        +CQCN G+AGNG  CG D+D DG+PD+ L C
Sbjct:  231 LVTQLTLFNQ---ILVELRDDIRDQVKEMSLIRNTIMECQVCGFHE-------------------QRSHCSPNPCFRGVDCMEVYEYPGYRCGPCPPGLQGNGTHCSDINECAHADPCFPGSSCINTMPGFHCEACPRGYKGTQVSGVGIDYARASKQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQSQGCLPARTCH---SPAHSPCHIHAHCLFERN-----GAVSCQCNVGWAGNGNVCGTDTDIDGYPDQALPC 471
The following BLAST results are available for this feature:
BLAST of TCONS_00011478 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSP32.936e-4636.53Thrombospondin-3 OS=Homo sapiens GN=THBS3 PE=1 SV=... [more]
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