TCONS_00011477 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011477
Unique NameTCONS_00011477
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length779

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011477 ID=TCONS_00011477|Name=TCONS_00011477|organism=Clytia hemisphaerica|type=transcript|length=779bp
AGTTAACCAAGGGTTACAGgtttcaagCATCAAATTGATGAAGAATACTG
TAAAAGAAATTGAACAAGGAAATTTCGGTGAAGGAAACAGAGAAAATGGA
CCTCTTCAGCAACTCATCAGAAACTCTCTACGTTTTGGTCGTCGAAATGC
TTGTTCATCTAACCCTTGTTATTATTTGGTGCCATGTTTCAAGACGAATG
ATGAGGCTGGATACCAGTGTGGTAAATGTCCTTTGGGTATGGAAGGTGAT
GGCAAGACTTGTCGCGATATTAATGAATGTTCATTAAATCCTTGTTCACC
ATTGACAACTTGTCAAAACCGTAACCCTGGTTACACTTGTACGCAATGTC
CGCCTGGTTTCCAAGGCAATGCAATCTTTGGACGTGGAAatgattttgcc
aaaaataataAACAGACATGTGTTGATGTAGACGAATGTACACAAACGCC
AAGTGTTTGCCCAAAACATACATTTTGTAATAATACCTATGGTGGATATT
TTTGTACGTCTTGTGAATCCGGATACGCATTCAACAAGTTTGGGAAATGT
GCGCAGATCCGAGAATGTCAAGGAGAACCAAGAAGTGCGCAAAATCCGTG
CTCTGAACATGCAACTTGTTCTTATGAGTTGAACGACCTCAAAGGTGGTG
ATATAAAAGCTTGTCAGtgTAACTTTGGGTATGCTGGTAACGGTTTTGAA
TGTGGAAAAGATTCAGATTTCGATGGATTTCCGGATGAAGATTTGAATTG
TGATCCGAAAATTGCAAGTTGTATAAAGG
Run BLAST on NCBI

transcript from alignment at sc0000128:204619..212532-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011477 ID=TCONS_00011477|Name=TCONS_00011477|organism=Clytia hemisphaerica|type=transcript|length=7914bp|location=Sequence derived from alignment at sc0000128:204619..212532- (Clytia hemisphaerica)
AGTTAACCAAGGGTTACAGGTAGAAATAATAAGTGTCAAATATCAACTAC
TTGAATATACCTTTCAATAATTACCTTCATTTTTCCACCACCTAGCGTTA
ATAGCTCTTTTGGAACCTGCAATTGAGTTTTAAGGCTAAAAGTGTTCTCA
AAATTTATTTATTTTCAGCATTCTATAAGTATTTTTGTGTAACTTTCTAA
TAAAATGCAATTTTTAGAGCTCTAAAGCTTTAAAGTGTTCTTAAACTTTT
TATATAAAAAAACGGTTGTTAGAATATTTATGGTTTATTGACTACTACCA
GTTAGCGTAGACAGGAGGGGCGCAAAATTTGTGTAGGAGAGCAGATTTTC
ACGACACAGTAGTAATTAATCTATTCATAATATAAAAAGATAATTACCGT
GTCATTAAAAATCTGCTCTCCTATACAAATTTTGCGCCCCTCTTGCCTAC
GCTACTGACTACTATAACAAAAACTACTCTCAAGACCTGAATCTCGTTAT
TTCAACACTTTTTTTAGGTTTCAAGCATCAAATTGATGAAGAATACTGTA
AAAGAAATTGAACAAGGAAATTTCGGTATGTCCTCCATATGTTCGTGTCA
ATTCTTGTTCTCCATATCCGGTCATATTTTTTATTATATGCGAAGTTGGG
AGAAGTATACCACAGTGTACTTTCTATTATTCAACGAATCAAGGCATTCT
CCAGCAGCAAAAGGGTATCCATGTACGAGAATTCATGAAAGCAAAGGGTC
TTTTAATATAAAAAGTGTTTTTGAGATTTGTTCATAAAGTTCATCAATCA
GAGGCTTATAGCAGAGAGATTCGATTTATAGAAATAATTTTAGGAGAGTG
TTCCCGGCAGTGGCGTTGTGGCAGGGGGGCCGGGGGGGCATGCCCCCCCC
CCCAGCGGAGCTTTTTTGAAGGGGCGCCAAAAGAAATTTTTTTAAACGCC
CCAATCTTAAAAATCATACTTTATACGCCTTAAATTACGCCCAGGACCAA
TTTTACTGAGATAATTTTAAAATACTTGCAATTTTTTTCGCTCGCTTCGC
TCGCAATACAGTTAATTGGTAACTTCTTTGCAATCTAGCTAATTTTAATT
TTTTTTGTGCATAATATAGCATTATTAAATGAACTGCGCCCCAAGACCAA
TATGCTGACAACAATATTGAAATCATAAAACATCAGTTTTTTCGCTCACT
TCGCTCACATAACACATTGTTTCTTTAAGTTCCTTTTCACTCTAGCAAGT
TTCAAATTTGTCTATTTTTATTTAGTGATTTAGGGTATCTTGGCAGTTGA
TTTAAAAAAAAATTTTCTACCGGGTGCGCCACAAAAAAGTTTCTCTCTTT
AAAACTAATTTTCTAGAAATCTAAAAAATTTAAAAGAACCATTCCAATTT
CATTGGAAAGAAGAAAAATAAACTTAAATTTTGATGGGTCATTTATTAAA
ATCGATTCATTAAAGTCAATTCACGATAAGTGTGCACTCTTTTTTCTTTT
ACCTATAACTTTTGAAGGAATTCTCCAATCTTTATAAATTTGGTATCATT
TGAAAGATATTAGTGAGTGGAACAATTTGAAGTAAAAAAATCTTTAAAAA
AATTCTAAAAATGAAGATGAAAATGAAGAAGAAAAAAAAGAAGATCTTGT
AGAAAAGTGCTATAACTTTCATTTTTACTGGAGAGATTCCTTGATCTTAG
GAGATCATCACTGTGAAAAAGTTTTATTAAAATATTTATTCAATATAAAG
TTATGATACAAAGTTAATAAGTGATTGACCCCAAAAAACAGCAAAAAATT
GCAGAAAACAGCGTTTTTAGACGTCAATGACGTTATAACTTTGTTTGATA
TCTTTTGACTGATTGGTTATTTTTGAGAATTCTTTTCACAGTGATGACGT
TCGATGATCAAGAATTCACTTCAGTGAAAATGATAGTTATAGCACTTTTC
TACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCTTCATTTTTAGAAT
TTTTTCAAAGATATTTTTATTTCAAATTGTTCCACTCACTAATATCTATC
CAATGATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAAG
TAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGATCAAAAG
TTATGCTCAATTGAATGAAAAAGTTGATTTCAGAAAGTGCTCGAAAACGT
TGAAAATCGACCTATCAAATTTTTATTTCAAAATTGGCAATCACAATGGC
CTTTACACGATTAAGAGCATTTTTGCAGTAACTAAACACATAAATTTCGA
AACTGAAAGGTCGAAAGTGTTTTAAAATCTTCATCAAAATCACTTTAATT
TACTTTTACCGATATTCTTCTTAGATTTTTGGTTTTAGATTGGATAAAGT
CTATGTAAGGCTGAATGTACCTCGAAACTTATATTTGGTGTATTTTTATG
AATTTTACCACGTTTTTTGGCCTTTTTCGACGAAGTTTCTGCCTTTTAGT
GAAATTCAGCCTTCTTTATATAACAAAAGGTCATTCATAGTTCGGAAGGG
GGTCACTACCCCCCCTACCCTAGAGCTACCCCCCCCCCCCCCCCCTTTCT
AAAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAG
GGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGG
GGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGG
GGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAG
CTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCT
AGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGG
TAGGGGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGG
GGGGGGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGTAGGGGGG
GGGGGAGCTCTAGGGTAGGGGGGGGGGGAGCTCTAGGGGAGGGGGGGGAG
GGACCCCCTTCCGAACTTTAAAAAACCTTTTTTTTTTTAAAAAAAAAAAG
GTTTTTTAAAGTTCGGAAGGGGGTCACTTCCCCCCCTCCCCTAGAGCTCC
CCCCCCCCCTTTATAAAGGGGGGGGTGCGAACTATGTCATTTATACCGCT
AATTATCATTTTTAATGACTGCGAGACAAAAATAATGATGTATTAAGTAA
TTATGCTTCTTTTTAATTTGATAGGTCGATTTTTAACGTTTTTGAGCACT
TTCAGACAGTAACTTTTTTGTTTAATTGAGCATAACTTTTTATCTAATGA
ATCAAATTTAATAAATGACCCATCAAAATTTAAGTTTATCTTTCTTCTTT
CCAATGAAATAGGAACGGTTCTTCTAAAATTTTTAGATTTTGAGAAAATT
AGTTTTAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTAGTCGGCCCAAA
CCATGTTGGGGCCTGTTTTTCCCTTTTCCGTTCATCAAAGATAAAGTTAC
TCTTTTCCACTAAATATTTCCTTCCTCTTTATGCCTAAGCAAATGAATTT
AGTGAAAGTTTAGAAAATGGTGGGTGGGGACACCACTTTGGAAAATTGGA
GAGGGGGGCGCCATTTAAAAAAATTGACTTTGGCCCCTCCAGAAAAATTT
TCCCACAACGCCACTGGTGGAGTGTTCCTTCTTAACGGGAACTGAAAAAC
TTCGCATTTTAATAAAAGAGATTTGAGTAATAGAAGTTCGAATAAGTGTT
ACTGCACTGTGGAACGTATTTCATTTTTACACAAATGTTTTCATAAGGTG
AAGGAAACAGAGAAAATGGACCTCTTCAGCAACTCATCAGAAACTCTCTA
CGTTTTGGTCGTCGAAATGCTTGTTCATCTAACCCTTGTTATTATTTGGT
GCCATGTTTCAAGACGAATGATGAGGCTGGATACCAGTGTGGTAAATGTC
CTTTGGGTATGGAAGGTGATGGCAAGACTTGTCGCGATATTAATGAAGTA
AGTCTATAAATTGTACAGTAAAATCAATCAAAATATAAAAGCCGCATTCT
TTTTCACCGTTCAACATATAAATTGTACAGTAGATTGCATAGGATTCGCA
TATCTTCGGAGGGAACTCGATATAAAAACGGTCGTGTGTTCGGCCCAAAG
TTAAGCCTGTAAATTTGAACCCAGTGAAGAGAAAATCTAGCCAAATTTGA
GTAAATTTTACTTTTGGTAAAATACCTTAAGTGACCGACGTCGAATTTTC
AGGCATTTTCAACAATCTGAACAGCTCTGCAGCACAGACCCGGTGGAGCA
TCCACCCCACTGAAAAGAAATTGCCAAAAATCGAACAAATACCCTGAAAT
TCAATCTCACTGTGCCCTATGGTTTTATTGGGAATGAAGATTGAGATTTC
GATAAATATTTTCATATCCCCAATGAGTGAGAAATATCCAATGGGACAGA
GGTATACTTAATTTTCATTATTTTGTTATACTTTCAGTGTTCATTAAATC
CTTGTTCACCATTGACAACTTGTCAAAACCGTAACCCTGGTTACACTTGT
ACGCAATGTCCGCCTGGTTTCCAAGGCAATGCAATCTTTGGACGTGGAAA
TGATTTTGCCAAAAATAATAAACAGGTACAACCATAGGATTTGAAGACAC
TTCTTTCCTGCATAGACGAACATTTCCCGGGGGGTATTTTTATATTTTTC
CAGTAGGTCAAAGGTTATTCTAAAATTTCAAGGGGGTCCACCCCTTACTT
TTAAGGTAGGAAAATAATTTTTCAAGACTTCTTTTGCAAATTTTGCCATT
TTCCAGGGGGTATTACCACATTTCTAAAAATCTTTTTTTGCCTTAAAAAG
GTTTGTCCACCCCCACCCCTGTATGGAAATTTAATGGACAACCCATTTGG
CAATATACTGCTTATTAAACTGTAGTATAATAATATTTTCCAAATTCCCT
ATCTTGAAAAAGGTTATCGCAACGTTTGTGCATTTGATTGTTCTTTGAGA
CGTGCGACTGGGAAGTATAATATTCTTCAAAGTGCTAATCTTGAGAAAGG
TTATGGCAGCAGTACAAACATGCATTTGATTGTTCTTTCAGACATGTGTT
GATGTAGACGAATGTACACAAACGCCAAGTGTTTGCCCAAAACATACATT
TTGTAATAATACCTATGTAAGTTATTGGTGAACTAACAAGTGTTTGTCCA
AAACATACATTTTGTAATAATACCTATGTAAGTCATTGGTGAACTAATTA
TCATAATCGCTAATTATGGTTATTTGGTCTAATGTCGACATTCCTCTTCT
TATTTCGACATCCTTCTTTAGATATAGGAATAATAGGAAGGTCGGAATTG
CTGATTGAAACTAATTTTCTCTGCTTAGCAATCAGTTGAGGAGTCCATCA
GTGATTCCGGCCTTTCTATTATTCCTATCTCTAAAGAAGGTTGTTGAAAT
TAGAAGAGGGATGTCGATATTCGACCAACTTACGGTAATTATTATTAAAG
CGAAACCGTAGTGTAAAGGTAAGAGAGGATTCCAATCCAGTATCAAAGGC
TTCAAAATGGGACTTGATGTTTTTCTGCTTAATGCTCAGAATGATCAAGG
GTGACTTTGTAAGTCATTGGTGAACTATTAATTATCATATTCTCTGATTA
TTATTAAAGCAAACCGTAGTGTAAGTAGAGGATTCGGTTTTCTAAGCAAT
AGGGGAGAACGATAGAGGGTTAATGAAACAATCCATGGAGAAAGATGGCG
CCCGCTCGGGTATATAGCTAAGGAGGCTGCGGGTCACCACAGCAAGACTT
ACTATTTAATTATTACTTCCTTTTCTTTTTGAGAGACTTTAAAAGAATTT
GGCTTACATAATTACACGTTTTTTAAGAGAAAGTTTATAAGAAGAATACG
AAGCTAACTTATTGCCAATTACCAAGAACAAATTACGAATAATCGCAGCC
TCGCTTTAAAAAAATGGCTAATGAAATGCTGCTATAAAGCTCATTTTAAA
CCGATAAGGAAATACAGTGCCAAGAGAAATTAAGAACATCCAAGTATGAA
AATAACGAGATAAAACAGCCCCAACCAAAATTTACTATTTCTATTTCTAC
TTATATTTTTATTTGATTGAGTCACAGGAGGCTTCGAGGCCTATTTTCGC
AACTATAGACGCTTTCAATTAGCGCCCCGTCAGCACCTTAGACTGACTAC
CTAACTCCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC
CCCCCACATGGCATGGGTTGACCCGGGCGAAAGTTCATTCACTTGCCAAG
TGAGCCGCTGCGAGTGGGAATCGAACCTCAGTCGCCTGTGCAGCAAGCAA
GGTCAATGACTACTATATCACAGCGCCTTGGTTCCTATATAAAAGGGTGT
ATGTCATTTCTATTTTGTCTCAATGAAAAAATCGAACAATACCGTAGAAA
TTATAAAAACCTTAGCAATCTTTTACTATTTTTTAGGGTGGATATTTTTG
TACGTCTTGTGAATCCGGATACGCATTCAACAAGTTTGGGAAATGTGCGC
AGATCCGAGAATGTCAAGGAGAACCAAGAAGTGCGCAAAATCCGTGCTCT
GAACATGCAACTTGTTCTTATGAGTTGAACGACCTCAAAGGTGGTGATAT
AAAAGCTTGTCAGGTATATAGTAGAGAACAGTTTTCAGATGTACGTTTTT
TTTCTTCTGTTTTTTTCTTCTGGAGAATTTAGTCGCCAGCTTCAAGCAGA
GATGGCCAAGCGGGGAAAGGCTTCAGCACCTCAAATCTCAAATCGCGGTT
CGAATCTCCGCTCCTTCTAATGTTCCGTTCAGTTTATAAAGCTGAGTCAG
CTGGCCGTAAACCCCGTGTAAAAAAGACCGAAGACCGCCTAGAATGTTGG
GCTCTACGTAAAAAATATTGACTCTAAGCTTTAGACACTTGACCAGATCC
GCGACCAGTGAATTATGATAACGATATTCTGTAATTCTAACCTCAATCTT
AGATCTGTATTTGCTGATGAAAAAAAGGTGTTCGTAGATACGACCATATG
CTAAAAAATGTTATTATTATAAATAGCTAAACAATGTTATCGCCTGTAAA
GCTTTATTGGCGAGCAGGAAAATAAGTTGCGGGAGGTTGAAGCCGTTCAT
GGCTGTAGAAAACAATTCTGTAAAAAATACTCCCGTTTTTGCGCTTGCTC
CTTAACTGGCTATTATTAACTCGTGGATGAAACTCGGGATGAAATTAAAA
AGTCTGGTATTTCACGATTGTACTTAACTGAACTCTATAAAAAACATATA
ATCGAATTGGAAATTAAACAAAGTTAAATTCAAGTTAATTCAATATTTTT
AGTGTAACTTTGGGTATGCTGGTAACGGTTTTGAATGTGGAAAAGATTCA
GATTTCGATGGATTTCCGGATGAAGATTTGAATTGTGATCCGAAAATTGC
AAGTTGTATAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006432XLOC_006432Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011477-exon-sc0000128-1575043694:212514..212532TCONS_00011477-exon-sc0000128-1575043694:212514..212532Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1575043694:211958..212015TCONS_00011477-exon-sc0000128-1575043694:211958..212015Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1575043694:208486..208685TCONS_00011477-exon-sc0000128-1575043694:208486..208685Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1575043694:207858..207995TCONS_00011477-exon-sc0000128-1575043694:207858..207995Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1575043694:207317..207391TCONS_00011477-exon-sc0000128-1575043694:207317..207391Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1575043694:205420..205596TCONS_00011477-exon-sc0000128-1575043694:205420..205596Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1575043694:204619..204730TCONS_00011477-exon-sc0000128-1575043694:204619..204730Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:212514..212532TCONS_00011477-exon-sc0000128-1510915933:212514..212532Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:211958..212015TCONS_00011477-exon-sc0000128-1510915933:211958..212015Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:208486..208685TCONS_00011477-exon-sc0000128-1510915933:208486..208685Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:207858..207995TCONS_00011477-exon-sc0000128-1510915933:207858..207995Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:207317..207391TCONS_00011477-exon-sc0000128-1510915933:207317..207391Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:205420..205596TCONS_00011477-exon-sc0000128-1510915933:205420..205596Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1510915933:204619..204730TCONS_00011477-exon-sc0000128-1510915933:204619..204730Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:212514..212532TCONS_00011477-exon-sc0000128-1491911889:212514..212532Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:211958..212015TCONS_00011477-exon-sc0000128-1491911889:211958..212015Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:208486..208685TCONS_00011477-exon-sc0000128-1491911889:208486..208685Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:207858..207995TCONS_00011477-exon-sc0000128-1491911889:207858..207995Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:207317..207391TCONS_00011477-exon-sc0000128-1491911889:207317..207391Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:205420..205596TCONS_00011477-exon-sc0000128-1491911889:205420..205596Clytia hemisphaericaexon
TCONS_00011477-exon-sc0000128-1491911889:204619..204730TCONS_00011477-exon-sc0000128-1491911889:204619..204730Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:204619..212532 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0224195	0.617261	0.218698	0.0778042	0	0.687335	0	0	0.0430696	0.388169	0	0.29873	0.021271	0.287713	0	0	1.67373	0.488924	0	0	1.20471	0.965332	0	0.656166	0	0	0.216696	0	0.117311	0.510779
Blast
[Close]
BLAST of TCONS_00011477 vs. Swiss-Prot (Human)
Match: TSP3 (Thrombospondin-3 OS=Homo sapiens GN=THBS3 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.266e-44
Identity = 94/247 (38.06%), Postives = 133/247 (53.85%), Query Frame = 2 
Query:   17 QVSSIKLMKNTVKEIEQGNFGEGNRENGPLQQLIRNSLRFGRRNACSSNPCYYLVPCFKTNDEAGYQCGKCPLGMEGDGKTCRDINECS-LNPCSPLTTCQNRNPGYTCTQCPPGFQGNAIFGRGNDFAKNNKQTCVDVDECTQ-TPSVCPKHTFCNNTYGGYFCTSCESGYAFNKFGKCAQIRECQGEPRSAQNPCSEHATCSYELNDLKGGDIKACQCNFGYAGNGFECGKDSDFDGFPDEDLNC 751
            QV  + L++NT+ E +   F E                   +R+ CS NPC+  V C +  +  GY+CG CP G++G+G  C DINEC+  +PC P ++C N  PG+ C  CP G++G  + G G D+A+ +KQ C D+DEC       C  ++ C NT G + C  C  G+  N+   C   R C      A +PC  HA C +E N    G + +CQCN G+AGNG  CG D+D DG+PD+ L C
Sbjct:  252 QVKEMSLIRNTIMECQVCGFHE-------------------QRSHCSPNPCFRGVDCMEVYEYPGYRCGPCPPGLQGNGTHCSDINECAHADPCFPGSSCINTMPGFHCEACPRGYKGTQVSGVGIDYARASKQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQSQGCLPARTCHS---PAHSPCHIHAHCLFERN----GAV-SCQCNVGWAGNGNVCGTDTDIDGYPDQALPC 471
The following BLAST results are available for this feature:
BLAST of TCONS_00011477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSP32.266e-4438.06Thrombospondin-3 OS=Homo sapiens GN=THBS3 PE=1 SV=... [more]
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