|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011474 ID=TCONS_00011474|Name=TCONS_00011474|organism=Clytia hemisphaerica|type=transcript|length=522bp
TAAATAGAAACGAAAGTCAATTCATGATAGATTTGGCACGAGTCAGAAGC
CGAAGCCAAGAATCATGCATTTCAACCATCACATTTATGCACTGAAAATC
TTTCACTAATGCACATCCCACTGATTTCCACATTCGATACAAAACAATAT
CGGTTTCCAATcgaaaattgaataaaagaagaccCTGGAAGAAGAATCTC
TGCAACAGCACCAGACAGTTGTAAGGCATCATAATTACCACATCGTTTGC
CTGCTCTCGCTACAGACAGACGTACTTTGAAGGCATTTTAGAAAAATGTG
GACTCCTAGGTAAAAAGGCGGAGTTTCATTTTATGTAAATattgtatcat
tttttaaagaatttcgaAACTTGTAACAAgatataacttttcaaattagG
AAAGATGAATCTAGATTCCAAGAATGATTCTGCGCATAAGACTAAACTTC
ACATTTGTTTTATGATCGGGCTCTTCGAGAAAATGTTCTTCAGCCAACAG
TGGAGGATACATTGTCAAAGGG Run BLAST on NCBI transcript from alignment at sc0000128:189859..191066- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011474 ID=TCONS_00011474|Name=TCONS_00011474|organism=Clytia hemisphaerica|type=transcript|length=1208bp|location=Sequence derived from alignment at sc0000128:189859..191066- (Clytia hemisphaerica)
TAAATAGAAACGAAAGTCAATTCATGATAGATTTGGCACGAGTCAGAAGC
CGAAGCCAAGAATCATGCATTTCAACCATCACATTTATGCACTGAAAATC
TTTCACTAATGCACATCCCACTGATTTCCACATTCGATACAAAACAATAT
CGGTTTCCGTAAGACGCAATTTCATTCATACATTTATACACACGTTTTGG
TATAATCATGTTTACAAGGACAAAACCTTATTAAGAAAAGTTAGTGTTAA
GTCAAGGGAGTTTAGGGTACACGTTTGTATATCTACATTGTTTTGCCTAT
GTGAGAGTTTGACAGTTTATTCTCACAAGGGGCCGTCTACATAGTACTAA
CGCACTAAAATGTCGAAAATCGAGTACCCCTTCCCCCTGTACGAAAGCGT
ACGCAAATGGCTATACCCCCTGGTAAGTACGTACTTTTTCATTCACCCCC
CTCCTCGGTTGAAGAAAATTTCGCTTGGTTCGGACCTTTATTTCATACAT
GAAACTCAATGTTTATTAAAAAAACTTTTTCTTTTTCTGCGTATAAGAAG
CGTGAAAGTCGGCAAAAAAGGGCTATAAAAATTTTCTCTGCGTACGTACA
TTTTCCTTCGACCCCTCCTCTCCCCCTGTACGCAAGCATACGCTTTTGGG
AAGACCCCCCCCCTTAGTGCGTACGTACTATGTGGACGGCCCCCAATCTC
TGATGAGAGTTTTTGTTTAATCTACAAAGGAGTGTACAAATGAGAATGTT
TTTACTATTCACCTTCGAAGGTGGACCGAGACCTTCTTCGACTTTCTCAT
TATTACTTACATAGGAGGTAAAGATAATTCATTCATAATTTTAGAATCGA
AAATTGAATAAAAGAAGACCCTGGAAGAAGAATCTCTGCAACAGCACCAG
ACAGTTGTAAGGCATCATAATTACCACATCGTTTGCCTGCTCTCGCTACA
GACAGACGTACTTTGAAGGCATTTTAGAAAAATGTGGACTCCTAGGTAAA
AAGGCGGAGTTTCATTTTATGTAAATATTGTATCATTTTTTAAAGAATTT
CGAAACTTGTAACAAGATATAACTTTTCAAATTAGGAAAGATGAATCTAG
ATTCCAAGAATGATTCTGCGCATAAGACTAAACTTCACATTTGTTTTATG
ATCGGGCTCTTCGAGAAAATGTTCTTCAGCCAACAGTGGAGGATACATTG
TCAAAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011474-exon-sc0000128-1575043694:190909..191066 | TCONS_00011474-exon-sc0000128-1575043694:190909..191066 | Clytia hemisphaerica | exon |
| TCONS_00011474-exon-sc0000128-1575043694:189859..190222 | TCONS_00011474-exon-sc0000128-1575043694:189859..190222 | Clytia hemisphaerica | exon |
| TCONS_00011474-exon-sc0000128-1510915933:190909..191066 | TCONS_00011474-exon-sc0000128-1510915933:190909..191066 | Clytia hemisphaerica | exon |
| TCONS_00011474-exon-sc0000128-1510915933:189859..190222 | TCONS_00011474-exon-sc0000128-1510915933:189859..190222 | Clytia hemisphaerica | exon |
| TCONS_00011474-exon-sc0000128-1491911889:190909..191066 | TCONS_00011474-exon-sc0000128-1491911889:190909..191066 | Clytia hemisphaerica | exon |
| TCONS_00011474-exon-sc0000128-1491911889:189859..190222 | TCONS_00011474-exon-sc0000128-1491911889:189859..190222 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128 | supercontig | sc0000128:189859..191066 - |
Blast
The following BLAST results are available for this feature:
|
