TCONS_00011431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011431
Unique NameTCONS_00011431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2224

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011431 ID=TCONS_00011431|Name=TCONS_00011431|organism=Clytia hemisphaerica|type=transcript|length=2224bp
CTTCACTTTTACAGATCGCTCACTTCACTGACAAAAGAGCATTTCTCTCC
GTAAATCTTTTCTCTAACTTCCGTTCATCTTGccaacaaaataaagaaaa
atggctGCTATGTTACGTGCCATTTCAAAACCATTAAATATGGCTGCTGG
CGTTGGCGCCGCCGCATTGGGTTTGGCCACCGGTGCTATGGGATTTCCTG
AAGCGGCTAACAGTTGCAAATCTCAGGTGAAAAAAGCCTACAGACAATTC
ATGCCGTGTATGGATTATCCTGATTTATCCAAACACAATAACTGCTTGAG
TAAAGTGTTGACACCGCAAATGTATACTAAACTTCGCGATTTGCAAACAC
CATCCGGTTATACACTTGATATGGCAATCCAAACAGGTGTCGACAATCCC
GGACATCCGTTTATTTCAACGGTCGGTGTTGTTGCCGGCGATGAAGAATC
TTATGAAGTCTTCAAAGAATTGATGGACCCCATCATCCAAGACAGACATA
ATGGTTTCGGACCAAATGATCGCCATAAGACTGACCTTGATGCCTCCAAA
ATTAAAgGTGGCAAGTTTGATGAGAAGTATGTTTTGAGTTCTCGCGTGCG
CACAGGACGTTCAATCAAGGGACATTCCCTTCCACCGCACTGCACTCGTG
CTGAACGTCGCAGTGTTGAACACATTGTCACATCCGCTTTGAACTCGTTG
CAAGGTGATCTGTCTGGTACTTATTATCCTTTATCTGGAATGAACGACGA
TGAACAACAACAATTGATCGATGATCATTTCTTGTTTGATAAACCAGTAT
CTCCATTATTGACATGCGCTGGTATGGCACGTGACTGGCCTGATGCACGT
GGTATCTGGCATAACAAAAATAAGAACTTCCTGATCTGGATCAACGAGGA
AGATCACACTCGTGTCATCTCTATGGAGAAGGGTGGAGACATGAAGAAAG
TCTTTGAACGATTCTGCCGTGGATTGAAAGAAGTTGAGAAACATATTGAG
GAACATGGCCATGGATTTATGTGGTCTGAACGTCTTGGATATATCTTGAC
TTGCCCATCAAATCTTGGAACTGGCCTCCGAGCCGGTGTTCACGTGAAAT
TACCAAAGCTGGCTCAAGACAAACGTTTCGATAACATTCTTCAAGCGTAC
CGTTTACAAAAACGTGGAACAGGAGGTGTCGACACTGCTGCTGTTGGTGG
TACCTTTGATATCTCAAACTTGGATCGTCTTGGACATTCTGAAGTTGAAC
TGGTCCAACAAGTCATCGATGGTGTCAATAACTTGATTGGTATGGAAAAA
TCCTTAGAAAAGGGTAAGAAGATTGACAGCCTCTTGCCAAAAAATATGAA
GTCTCAATAGAGACTTCATTAATATGAATCACgtatacttttgaatttta
CATTTATTATAagactttataaaaaaaaaaattaaaaaaaaaattaaaac
aaaaaataaaacaaaaaaaacataaactttctttgcaaaaatacaaaaac
aaaacaaaacaaaaaaagaacataaaatttccttcaaaaatacaaaaaca
aaattttgtcttactttatctttattataaaaTGAAATACTCGGCATAAA
GCCAAAAAACTATGTAAATGGTCATCCGCTCGATAGGAGGTTTAAGTAAT
GCAAGCTTTATCAAAATTATTAAATATAATCAAAACATCATCATTATAAT
GGCCAAAAGTTTATAACCAATGCAAATGTTACCTTACTGCCTAGACTTTC
ACCTTCTTTTCATCTAACAATcttccccctttttttaatccTGTTCGAGT
GTCAAGTTTTAtgcttttttgaaatattgaaatcaGAAATTCTTAGTTAA
GGATCAAGATATATTTACTTAATTCGTAAGTTTGGAAGGGTCAGGATAGT
TTGAGAATTTTCAATAATAAGTCTTTTTGAGTTTATCGAGCCCCGAGGGC
GATGTCAGCTCTAAACGAAAACTGATTTTTTAGGaaacttttgatatttt
tcaaatttccttcagaaagaatgtttaaaaaattgcgTGAAGAAACTTTT
AGGAGAAAGTGTAAAACAACCTCTTCATCTCACTGTAAAATTGTACTTTT
TTCTCGAGAACATGGTCTGTTTATTTGAGTAgttagaaaataaaatcatt
ttacaATTGAAAAGGATTAGGATAGTTTTTAAATTGACAATTTTCAATAA
TAAGTCTTTTTGAGTTTATCGANN
Run BLAST on NCBI

protein sequence of TCONS_00011431-protein

>TCONS_00011431-protein ID=TCONS_00011431-protein|Name=TCONS_00011431-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MAAMLRAISKPLNMAAGVGAAALGLATGAMGFPEAANSCKSQVKKAYRQF
MPCMDYPDLSKHNNCLSKVLTPQMYTKLRDLQTPSGYTLDMAIQTGVDNP
GHPFISTVGVVAGDEESYEVFKELMDPIIQDRHNGFGPNDRHKTDLDASK
IKGGKFDEKYVLSSRVRTGRSIKGHSLPPHCTRAERRSVEHIVTSALNSL
QGDLSGTYYPLSGMNDDEQQQLIDDHFLFDKPVSPLLTCAGMARDWPDAR
GIWHNKNKNFLIWINEEDHTRVISMEKGGDMKKVFERFCRGLKEVEKHIE
EHGHGFMWSERLGYILTCPSNLGTGLRAGVHVKLPKLAQDKRFDNILQAY
RLQKRGTGGVDTAAVGGTFDISNLDRLGHSEVELVQQVIDGVNNLIGMEK
SLEKGKKIDSLLPKNMKSQ
Run BLAST on NCBI

transcript from alignment at sc0000128:24190..30440+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011431 ID=TCONS_00011431|Name=TCONS_00011431|organism=Clytia hemisphaerica|type=transcript|length=6251bp|location=Sequence derived from alignment at sc0000128:24190..30440+ (Clytia hemisphaerica)
CTTCACTTTTACAGATCGCTCACTTCACTGACAAAAGAGCATTTCTCTCC
GTAAATCTTTTCTCTAACGTAAGTATAATTcttgctttgtttttgtttgc
tttgattattttttactttaaacGATTAAAGAAAATGTACATATCTGGAT
CTAGTTTCGTATTCAATTACTTTTGACCTTGGTTAAGTAAGTTCGAGTTG
ATCCTGAGCCACCTTAGTTCAGCTTACCtaattttagccaattttagCTT
ATTCTAGTCTTTTCTACCAAGGCAGGACTACTTTTAATCTACATGCGCTC
CTTTTCAGCTAAGTTTAACTACATTTGAGCTCTCGttgaacatttcaaaa
tatctttGCTACTTTTAAGCAAGTATTTGCCCTATTTGACCTAAGTTTGA
CAACTTTGAGCCTATCCTGGCTcctttttttacaagttttgctACTTTTG
GCTTACCCTAGCTCATTTTGGTCTAAGTTTGACTACTTTGAGCCTTCACT
CAACCTTTTAAGCTAAGTTTTCGTACTTTTGGCCTACCCTAGCTCATTTT
AGTCTAAGTTTGACTACTTTGAGCCTTCATTTTACctttaaacaaaattt
ttataCTTTGAATCTACCCTAGCTCATTTTGGTCTAAGTTTTGCTACTTT
GAGCCTTCACTTAACCTTTTAAGCTAAGTTTTCGTACTTTGAGTCAACCG
TAGCTCATTTTGGCCTAAGTTTGACTACTTTGAGCCTTCACTTTACCTTT
TAAGCTAAGTTTTGCTACTTTTGGCCTACCGTAGCTCATTTTAGTCTAAG
TTTGACTACTTTGAGCCTTCCTTTTACctttaaactaaatttttatACTT
TGAATCTACCCTAGCTCATTTTGGTCTAAGTTTTGCTTCTTTGAGCTTTC
ACTTAACCTTTTAAGCTAAGTTTTCGTACTTTGAGTCAACCGTAGCTCAT
TTTGGCCTAAGTTTGACCACTTTGAGCCTACCCTGGctcatttttgccta
agtttgACTACTTTGAGCCTTCACTTAACCTTTTAAGCTAAGTGTTGCTA
CTTTGAGCCTACCCTGGCTCGTTTTGGCCTAGGTTTGACTACTTTGAGCC
TTCATTTTACctttaaacaaaatttttacaCTTTGAATCTACCCTAGCTC
ATTTTGGTCTAAGTTTGACCACTTTGAGCCTTCACTTAACCTTTTAAGCT
AAGTTTTTCTACTTTTGGCCTACCCTAGCTCATTTTAGTCTAAGTTTGAC
TACTTTGAGTCTACACTTaaccttttgagctaagttgTGCTACCCTTGGC
CTACCCTAGCTCATTTTAGTCAAAGTTTGACTACTTTGAGTCTACACTTa
accttttgagctaagttgTGCTACCCTTGGCCTACCCTAGCTCATTTTAG
TCAAAGTTTGACTACTTTGAGCCTTCACTTAACCTTTTAAGCTAAGTTTT
GCTACTTTTGGCCTACCCTAGCTCATTTTAGTCAAAGTTTGACTACTTTG
AGCCTTCACTTAATCTTTTAAGCTAAGTTTTGCTACTTTTGGCCTACCCT
AGCTCATTTTAGTCTAAGTTTGGTTACTTTGAGCCTACACTTAACCTTTT
AAGCTAAGTTGTGCTACTTTTGGCCTACCCTGACTCATTTTAGTCTAAGT
TTGACTACTTTGAGCCTTCCCTGGCTCCTTTTGGCCTCAGTTTTCGTACA
TGGCTCATTTTTGCTTCTTTAATAAGCTTACACTATTTCTTTATAGTCTA
AGTTTGATTACTTTAAGCCTACACTGGCTCTTTTTGGCCAAGTTTGGTCC
TCCAATGAACCTATTGAAGTAAGTTTTGCTACTTTGAGCCGGTACTGCCT
CTTTTGAACgaagtttttcttcttttgagcaCTCTTTGAGTTGAGTTTAC
AGGGACACTCTTTGAGTTGAGTTTGACTACTTTTACGTCTTCATTTAAGC
TGTATGCTATCCTTCTGAACTAGATGTGACCACTTTACACAGCACGCCGA
GACTTTCTAACACAGCATTGTAACGCTAGCCAACTCataataaacaaaaa
ttccGTTATATTTATAGTTCCGTTCATCTTGccaacaaaataaagaaaaa
tggctGCTATGTTACGTGCCATTTCAAAACCATTAAATATGGCTGCTGGC
GTTGGCGCCGCCGCATTGGGTTTGGCCACCGGTGCTATGGGATTTCCTGA
AGCGGCTAACAGTTGCAAATCTCAGGTGAAAAAAGCCTACAGACAATTCA
TGCCGTGTATGGATTATCCTGATTTATCCAAACACAATAACTGCTTGAGT
AAAGTGTTGACACCGCAAATGTATACTAAACTTCGCGATTTGGTAAGTTG
CTCTATGTTTCTATATTTGTATGTTTTCCAAAACGATTTTTATTAATCTT
CAGTTATAAAACATTTTTACGCGTTTGCCTCCTTACTTATTTAAGATCTA
TGAATATTCTTTAAGTTTACTCGACTTTTGAGTGGTACTGAAATTAATAC
AGCATATAAGTAAATACATATAAGCTTGAAGCTCTCAAGTcaataaagta
gtaaaaatccGAAAGAAATGACATGCAAAAATTCATTCATTACCTTATCG
GCCTATTTTACGTATATATTATCGGCGTTATTTTTTTTCGTCGCTGGCGT
AAGGAACGGAATTAAATTAGGACATTGCTAAAAACGGAAAAATAGAGCTT
GGGTGTAAGAAGTGCCTGCGTAAAAACGACCAGCGTTAAATTAGAGCCAG
CGTAAAAACGGCCGATAAGATACTTCTTTTATATCGAAAAgcctaaaatt
ttccaaatataaaaaatatgtgaGACATGtctttattatatattttctaG
CAAACACCATCCGGTTATACACTTGATATGGCAATCCAAACAGGTGTCGA
CAATCCCGGACATCCGTTTATTTCAACGGTCGGTGTTGTTGCCGGCGATG
AAGAATCTTATGAAGTCTTCAAAGAATTGATGGACCCCATCATCCAAGAC
AGACATAATGGTTTCGGACCAAATGATCGCCATAAGACTGACCTTGATGC
CTCCAAAATTAAAggtacttttttttctttggtcAAATTGAGAAATGATT
TCTTAATATTATGTAAGGCAACAACAAAACATTATACGACCCATAGTAAA
TGATTCTGCTGAAGTTtacagttttgaaaattctaCTGATTACACATTTT
GGAAGATAGTCCTCAATtgagatatttttttccatAGAGACATTCCAAAT
TTTTCTTCCTTGGACGAAACCATGGTTTATACCCGCCAATGTATAAAACA
TATTTCAACCAAATACTATAAGTTTCCTGTATGAAAACAAGCTTAATATC
GCTTCAATGTTCATAAAATAACACTTTTGTTTATGGTCTTATACAGGTGG
CAAGTTTGATGAGAAGTATGTTTTGAGTTCTCGCGTGCGCACAGGACGTT
CAATCAAGGGACATTCCCTTCCACCGCACTGCACTCGTGCTGAACGTCGC
AGTGTTGAACACATTGTCACATCCGCTTTGAACTCGTTGCAAGGTGATCT
GTCTGGTACTTATTATCCTTTATCTGGAATGAACGACGATGAACAACAAC
AATTGATCGATGATCATTTCTTGTTTGATAAACCAGTATCTCCATTATTG
ACATGCGCTGGTATGGCACGTGACTGGCCTGATGCACGTGGTATCTGGCA
TAACAAAAATAAGAACTTCCTGATCTGGATCAACGAGGAAGATCACACTC
GTGTCATCTCTATGGAGAAGGGTGGAGACATGAAGAAAGTCTTTGAACGA
TTCTGCCGTGGATTGAAAGAAGTTGAGAAACATATTGAGGAACATGGCCA
TGGATTTATGTGGTCTGAACGTCTTGGATATATCTTGACTTGCCCATCAA
ATCTTGGAACTGGCCTCCGAGCCGGTAAGTACTTTATATAGAACTATAGA
GGCTAAACGCAATGCTCAAGGATCcgcaacattaaaaaaaaaatctttct
acaTAATACATATATACCATTAAGGCCATTCCAAAGGAATAAAGGGAGGG
AAAACCATCTTTTTCGACTGGGTACCACCAATAGGGACCTGGTGGAATGC
CGCATTCCATGTTCCATTCGATAGCACTCATTGAAGATATCTAAAATCTT
GGGGGTTGTATTTTCGAATTGATCCATTATATTCTTTGGCACGATACTCC
CGAGCTCATATAAGattatttttcagtttcaatATCGTTTTTCGACCACA
GCTTCAAAACCCTTTCCAAATCTCATTCAGGTGTTCACGTGAAATTACCA
AAGCTGGCTCAAGACAAACGTTTCGATAACATTCTTCAAGCGTACCGTTT
ACAAAAACGTGGAACAGGAGGTGTCGACACTGCTGCTGTTGGTGGTACCT
TTGATATCTCAAACTTGGATCGTCTTGGACATTCTGAAGTTGAACTGGTC
CAACAAGTCATCGATGGTGTCAATAACTTGATTGGTATGGAAAAATCCTT
AGAAAAGGGTAAGAAGATTGACAGCCTCTTGCCAAAAAATATGAAGTCTC
AATAGAGACTTCATTAATATGAATCACgtatacttttgaattttaCATTT
ATTATAagactttataaaaaaaaaaattaaaaaaaaaattaaaacaaaaa
ataaaacaaaaaaaacataaactttctttgcaaaaatacaaaaacaaaac
aaaacaaaaaaagaacataaaatttccttcaaaaatacaaaaacaaaatt
ttgtcttactttatctttattataaaaTGAAATACTCGGCATAAAGCCAA
AAAACTATGTAAATGGTCATCCGCTCGATAGGAGGTTTAAGTAATGCAAG
CTTTATCAAAATTATTAAATATAATCAAAACATCATCATTATAATGGCCA
AAAGTTTATAACCAATGCAAATGTTACCTTACTGCCTAGACTTTCACCTT
CTTTTCATCTAACAATcttccccctttttttaatccTGTTCGAGTGTCAA
GTTTTAtgcttttttgaaatattgaaatcaGAAATTCTTAGTTAAGGATC
AAGATATATTTACTTAATTCGTAAGTTTGGAAGGGTCAGGATAGTTTGAG
AATTTTCAATAATAAGTCTTTTTGAGTTTATCGAGCCCCGAGGGCGATGT
CAGCTCTAAACGAAAACTGATTTTTTAGGaaacttttgatatttttcaaa
tttccttcagaaagaatgtttaaaaaattgcgTGAAGAAACTTTTAGGAG
AAAGTGTAAAACAACCTCTTCATCTCACTGTAAAATTGTACTTTTTTCTC
GAGAACATGGTCTGTTTATTTGAGTAgttagaaaataaaatcattttaca
ATTGAAAAGGATTAGGATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATCTAGGAGAAAGTGTAAAACAATCTCTTCATCTCACTGTAAAAT
TGTACTTTTTTCTCGAGAACATGGTNATGgaacttttgatattttcaaac
tTCCTTCAGAAAGgatgtttaaaaaattgcatgaaaaaaacttttaggaG
AAACTGTAAAACAATCTCTTCATCTCACTGTAAAATTGTACTTTTTTCTA
GAGAACATGGTCTGTTTATTTGAGTAgttagaaaataaaatcattttaca
ATTGAAAAGGATTAGATAGTTTTTAAATTGACAATTTTCAATAATAAGTC
TTTTTGAGTTTATCGAGCTCCGAGGGCGGTGTCAGCTCTAaatgaaaact
gattttttatggaacttttgatattttcaaactTCCTTCAGAAAGgatgt
ttaaaaaattgcatgaaaaaaacttttaggaGAAACTGTAAAACAATCTC
TTCATCTCACTGTAAAATTGTACTTTTTTCTAGAGAACATGGTCTGTTTA
TTTGAGTAgttagaaaataaaatcattttacaATTGAAAAGGATTAGGAT
AGTTTTTAAATTGACAATTTTCAATAATAAGTCTTTTTGAGTTTATCGAN
N

Coding sequence (CDS) from alignment at sc0000128:24190..30440+

>TCONS_00011431 ID=TCONS_00011431|Name=TCONS_00011431|organism=Clytia hemisphaerica|type=CDS|length=5040bp|location=Sequence derived from alignment at sc0000128:24190..30440+ (Clytia hemisphaerica)
atggctGCTATGTTACGTGCCATTTCAAAACCATTAAATATGGCTGCTGG
CGTTGGCGCCGCCGCATTGGGTTTGGCCACCGGTGCTATGGGATTTCCTG
AAGCGGCTAACAGTTGCAAATCTCAGGTGAAAAAAGCCTACAGACAATTC
ATGCCGTGTATGGATTATCCTGATTTATCCAAACACAATAACTGCTTGAG
TAAAGTGTTGACACCGCAAATGTATACTAAACTTCGCGATTTGCAAACAC
CATCCGGTTATACACTTGATATGGCAATCCAAACAGGTGTCGACAATCCC
GGACATCCGTTTATTTCAACGGTCGGTGTTGTTGCCGGCGATGAAGAATC
TTATGAAGTCTTCAAAGAATTGATGGACCCCATCATCCAAGACAGACATA
ATGGTTTCGGACCAAATGATCGCCATAAGACTGACCTTGATGCCTCCAAA
ATTAAAgGTGGCAAGTTTGATGAGAAGTATGTTTTGAGTTCTCGCGTGCG
CACAGGACGTTCAATCAAGGGACATTCCCTTCCACCGCACTGCACTCGTG
CTGAACGTCGCAGTGTTGAACACATTGTCACATCCGCTTTGAACTCGTTG
CAAGGTGATCTGTCTGGTACTTATTATCCTTTATCTGGAATGAACGACGA
TGAACAACAACAATTGATCGATGATCATTTCTTGTTTGATAAACCAGTAT
CTCCATTATTGACATGCGCTGGTATGGCACGTGACTGGCCTGATGCACGT
GGTATCTGGCATAACAAAAATAAGAACTTCCTGATCTGGATCAACGAGGA
AGATCACACTCGTGTCATCTCTATGGAGAAGGGTGGAGACATGAAGAAAG
TCTTTGAACGATTCTGCCGTGGATTGAAAGAAGTTGAGAAACATATTGAG
GAACATGGCCATGGATTTATGTGGTCTGAACGTCTTGGATATATCTTGAC
TTGCCCATCAAATCTTGGAACTGGCCTCCGAGCCGGTGTTCACGTGAAAT
TACCAAAGCTGGCTCAAGACAAACGTTTCGATAACATTCTTCAAGCGTAC
CGTTTACAAAAACGTGGAACAGGAGGTGTCGACACTGCTGCTGTTGGTGG
TACCTTTGATATCTCAAACTTGGATCGTCTTGGACATTCTGAAGTTGAAC
TGGTCCAACAAGTCATCGATGGTGTCAATAACTTGATTGGTATGGAAAAA
TCCTTAGAAAAGGGTAAGAAGATTGACAGCCTCTTGCCAAAAAATATGAA
GTCTCAATAGatggctGCTATGTTACGTGCCATTTCAAAACCATTAAATA
TGGCTGCTGGCGTTGGCGCCGCCGCATTGGGTTTGGCCACCGGTGCTATG
GGATTTCCTGAAGCGGCTAACAGTTGCAAATCTCAGGTGAAAAAAGCCTA
CAGACAATTCATGCCGTGTATGGATTATCCTGATTTATCCAAACACAATA
ACTGCTTGAGTAAAGTGTTGACACCGCAAATGTATACTAAACTTCGCGAT
TTGCAAACACCATCCGGTTATACACTTGATATGGCAATCCAAACAGGTGT
CGACAATCCCGGACATCCGTTTATTTCAACGGTCGGTGTTGTTGCCGGCG
ATGAAGAATCTTATGAAGTCTTCAAAGAATTGATGGACCCCATCATCCAA
GACAGACATAATGGTTTCGGACCAAATGATCGCCATAAGACTGACCTTGA
TGCCTCCAAAATTAAAgGTGGCAAGTTTGATGAGAAGTATGTTTTGAGTT
CTCGCGTGCGCACAGGACGTTCAATCAAGGGACATTCCCTTCCACCGCAC
TGCACTCGTGCTGAACGTCGCAGTGTTGAACACATTGTCACATCCGCTTT
GAACTCGTTGCAAGGTGATCTGTCTGGTACTTATTATCCTTTATCTGGAA
TGAACGACGATGAACAACAACAATTGATCGATGATCATTTCTTGTTTGAT
AAACCAGTATCTCCATTATTGACATGCGCTGGTATGGCACGTGACTGGCC
TGATGCACGTGGTATCTGGCATAACAAAAATAAGAACTTCCTGATCTGGA
TCAACGAGGAAGATCACACTCGTGTCATCTCTATGGAGAAGGGTGGAGAC
ATGAAGAAAGTCTTTGAACGATTCTGCCGTGGATTGAAAGAAGTTGAGAA
ACATATTGAGGAACATGGCCATGGATTTATGTGGTCTGAACGTCTTGGAT
ATATCTTGACTTGCCCATCAAATCTTGGAACTGGCCTCCGAGCCGGTGTT
CACGTGAAATTACCAAAGCTGGCTCAAGACAAACGTTTCGATAACATTCT
TCAAGCGTACCGTTTACAAAAACGTGGAACAGGAGGTGTCGACACTGCTG
CTGTTGGTGGTACCTTTGATATCTCAAACTTGGATCGTCTTGGACATTCT
GAAGTTGAACTGGTCCAACAAGTCATCGATGGTGTCAATAACTTGATTGG
TATGGAAAAATCCTTAGAAAAGGGTAAGAAGATTGACAGCCTCTTGCCAA
AAAATATGAAGTCTCAATAGatggctGCTATGTTACGTGCCATTTCAAAA
CCATTAAATATGGCTGCTGGCGTTGGCGCCGCCGCATTGGGTTTGGCCAC
CGGTGCTATGGGATTTCCTGAAGCGGCTAACAGTTGCAAATCTCAGGTGA
AAAAAGCCTACAGACAATTCATGCCGTGTATGGATTATCCTGATTTATCC
AAACACAATAACTGCTTGAGTAAAGTGTTGACACCGCAAATGTATACTAA
ACTTCGCGATTTGCAAACACCATCCGGTTATACACTTGATATGGCAATCC
AAACAGGTGTCGACAATCCCGGACATCCGTTTATTTCAACGGTCGGTGTT
GTTGCCGGCGATGAAGAATCTTATGAAGTCTTCAAAGAATTGATGGACCC
CATCATCCAAGACAGACATAATGGTTTCGGACCAAATGATCGCCATAAGA
CTGACCTTGATGCCTCCAAAATTAAAgGTGGCAAGTTTGATGAGAAGTAT
GTTTTGAGTTCTCGCGTGCGCACAGGACGTTCAATCAAGGGACATTCCCT
TCCACCGCACTGCACTCGTGCTGAACGTCGCAGTGTTGAACACATTGTCA
CATCCGCTTTGAACTCGTTGCAAGGTGATCTGTCTGGTACTTATTATCCT
TTATCTGGAATGAACGACGATGAACAACAACAATTGATCGATGATCATTT
CTTGTTTGATAAACCAGTATCTCCATTATTGACATGCGCTGGTATGGCAC
GTGACTGGCCTGATGCACGTGGTATCTGGCATAACAAAAATAAGAACTTC
CTGATCTGGATCAACGAGGAAGATCACACTCGTGTCATCTCTATGGAGAA
GGGTGGAGACATGAAGAAAGTCTTTGAACGATTCTGCCGTGGATTGAAAG
AAGTTGAGAAACATATTGAGGAACATGGCCATGGATTTATGTGGTCTGAA
CGTCTTGGATATATCTTGACTTGCCCATCAAATCTTGGAACTGGCCTCCG
AGCCGGTGTTCACGTGAAATTACCAAAGCTGGCTCAAGACAAACGTTTCG
ATAACATTCTTCAAGCGTACCGTTTACAAAAACGTGGAACAGGAGGTGTC
GACACTGCTGCTGTTGGTGGTACCTTTGATATCTCAAACTTGGATCGTCT
TGGACATTCTGAAGTTGAACTGGTCCAACAAGTCATCGATGGTGTCAATA
ACTTGATTGGTATGGAAAAATCCTTAGAAAAGGGTAAGAAGATTGACAGC
CTCTTGCCAAAAAATATGAAGTCTCAATAGatggctGCTATGTTACGTGC
CATTTCAAAACCATTAAATATGGCTGCTGGCGTTGGCGCCGCCGCATTGG
GTTTGGCCACCGGTGCTATGGGATTTCCTGAAGCGGCTAACAGTTGCAAA
TCTCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTGTATGGATTATCC
TGATTTATCCAAACACAATAACTGCTTGAGTAAAGTGTTGACACCGCAAA
TGTATACTAAACTTCGCGATTTGCAAACACCATCCGGTTATACACTTGAT
ATGGCAATCCAAACAGGTGTCGACAATCCCGGACATCCGTTTATTTCAAC
GGTCGGTGTTGTTGCCGGCGATGAAGAATCTTATGAAGTCTTCAAAGAAT
TGATGGACCCCATCATCCAAGACAGACATAATGGTTTCGGACCAAATGAT
CGCCATAAGACTGACCTTGATGCCTCCAAAATTAAAgGTGGCAAGTTTGA
TGAGAAGTATGTTTTGAGTTCTCGCGTGCGCACAGGACGTTCAATCAAGG
GACATTCCCTTCCACCGCACTGCACTCGTGCTGAACGTCGCAGTGTTGAA
CACATTGTCACATCCGCTTTGAACTCGTTGCAAGGTGATCTGTCTGGTAC
TTATTATCCTTTATCTGGAATGAACGACGATGAACAACAACAATTGATCG
ATGATCATTTCTTGTTTGATAAACCAGTATCTCCATTATTGACATGCGCT
GGTATGGCACGTGACTGGCCTGATGCACGTGGTATCTGGCATAACAAAAA
TAAGAACTTCCTGATCTGGATCAACGAGGAAGATCACACTCGTGTCATCT
CTATGGAGAAGGGTGGAGACATGAAGAAAGTCTTTGAACGATTCTGCCGT
GGATTGAAAGAAGTTGAGAAACATATTGAGGAACATGGCCATGGATTTAT
GTGGTCTGAACGTCTTGGATATATCTTGACTTGCCCATCAAATCTTGGAA
CTGGCCTCCGAGCCGGTGTTCACGTGAAATTACCAAAGCTGGCTCAAGAC
AAACGTTTCGATAACATTCTTCAAGCGTACCGTTTACAAAAACGTGGAAC
AGGAGGTGTCGACACTGCTGCTGTTGGTGGTACCTTTGATATCTCAAACT
TGGATCGTCTTGGACATTCTGAAGTTGAACTGGTCCAACAAGTCATCGAT
GGTGTCAATAACTTGATTGGTATGGAAAAATCCTTAGAAAAGGGTAAGAA
GATTGACAGCCTCTTGCCAAAAAATATGAAGTCTCAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006414XLOC_006414Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011431-exon-sc0000128-1491911889:24190..24257TCONS_00011431-exon-sc0000128-1491911889:24190..24257Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1510915933:24190..24257TCONS_00011431-exon-sc0000128-1510915933:24190..24257Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1575043694:24190..24257TCONS_00011431-exon-sc0000128-1575043694:24190..24257Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1491911889:26257..26531TCONS_00011431-exon-sc0000128-1491911889:26257..26531Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1510915933:26257..26531TCONS_00011431-exon-sc0000128-1510915933:26257..26531Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1575043694:26257..26531TCONS_00011431-exon-sc0000128-1575043694:26257..26531Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1491911889:27040..27253TCONS_00011431-exon-sc0000128-1491911889:27040..27253Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1510915933:27040..27253TCONS_00011431-exon-sc0000128-1510915933:27040..27253Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1575043694:27040..27253TCONS_00011431-exon-sc0000128-1575043694:27040..27253Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1491911889:27586..28113TCONS_00011431-exon-sc0000128-1491911889:27586..28113Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1510915933:27586..28113TCONS_00011431-exon-sc0000128-1510915933:27586..28113Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1575043694:27586..28113TCONS_00011431-exon-sc0000128-1575043694:27586..28113Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1491911889:28470..29495TCONS_00011431-exon-sc0000128-1491911889:28470..29495Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1510915933:28470..29495TCONS_00011431-exon-sc0000128-1510915933:28470..29495Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1575043694:28470..29495TCONS_00011431-exon-sc0000128-1575043694:28470..29495Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1491911889:30328..30440TCONS_00011431-exon-sc0000128-1491911889:30328..30440Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1510915933:30328..30440TCONS_00011431-exon-sc0000128-1510915933:30328..30440Clytia hemisphaericaexon
TCONS_00011431-exon-sc0000128-1575043694:30328..30440TCONS_00011431-exon-sc0000128-1575043694:30328..30440Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011431-proteinTCONS_00011431-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:24190..30440 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0843102	0.103017	0.313278	0.3133	2.05023	1.62739	0.907257	0.672751	3.63121	3.14453	3.09975	4.80077	0.391114	0.615894	0.0707361	0.0214582	0.0747072	0.0675775	1.80251	1.40921	0.680931	0.818339	0.536171	0.677817	0.967289	1.9562	0.0241424	0	0.0195422	0.0199104
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022413ATP-guanido_PTrfase_N
IPR022414ATP-guanido_PTrfase_cat
IPR014746Gln_synth/guanido_kin_cat_dom
IPR022415ATP-guanido_PTrfase_AS
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0016772transferase activity, transferring phosphorus-containing groups
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0016772 transferase activity, transferring phosphorus-containing groups
Blast
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BLAST of TCONS_00011431 vs. Swiss-Prot (Human)
Match: KCRS (Creatine kinase S-type, mitochondrial OS=Homo sapiens GN=CKMT2 PE=1 SV=2)

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 267/369 (72.36%), Postives = 310/369 (84.01%), Query Frame = 2 
Query:  221 SQVKKAYRQFMPCMDYPDLSKHNNCLSKVLTPQMYTKLRDLQTPSGYTLDMAIQTGVDNPGHPFISTVGVVAGDEESYEVFKELMDPIIQDRHNGFGPND-RHKTDLDASKIKGGKFDEKYVLSSRVRTGRSIKGHSLPPHCTRAERRSVEHIVTSALNSLQGDLSGTYYPLSGMNDDEQQQLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNKNKNFLIWINEEDHTRVISMEKGGDMKKVFERFCRGLKEVEKHIEEHGHGFMWSERLGYILTCPSNLGTGLRAGVHVKLPKLAQDKRFDNILQAYRLQKRXXXXXXXXXXXXXFDISNLDRLGHSEVELVQQVIDGVNNLIGMEKSLEKGKKI 1324
            ++V++  R F P  DYPDL KHNNC+++ LTP +Y KLR+  TP+GYTLD  IQTGVDNPGHPFI TVG+VAGDEESYEVF +L DP+I+ RHNG+ P   +H TDLDASKI  G+FDE YVLSSRVRTGRSI+G SLPP CTRAERR VE++  +AL  L+GDL+G YY LS M + +QQ+LIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHN +K FLIWINEEDHTRVISMEKGG+MK+VFERFCRGLKEVE+ I+E G  FMW+ERLGYILTCPSNLGTGLRAGVHV++PKL++D RF  IL+  RLQKRGTGGVDTAAV   +DISN+DR+G SEVELVQ VIDGVN L+  EK LE+G+ I
Sbjct:   39 AEVREQPRLFPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQFDEHYVLSSRVRTGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDPRFSKILENLRLQKRGTGGVDTAAVADVYDISNIDRIGRSEVELVQIVIDGVNYLVDCEKKLERGQDI 407
The following BLAST results are available for this feature:
BLAST of TCONS_00011431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCRS0.000e+072.36Creatine kinase S-type, mitochondrial OS=Homo sapi... [more]
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