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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011412 ID=TCONS_00011412|Name=TCONS_00011412|organism=Clytia hemisphaerica|type=transcript|length=933bp
cttttgttttcaagtcagaaaattcagtggggacgGGGAAATTAGTGACG
GTGGGAAATTcttgccaatttttccagtgggaagggttcccagtgggtct
gtgagaagggggtgtttttggaattttacttttctcaaacttttcaagaa
tattttttgCGTTCATAAACTTTCACCTAAGTTGTTTGATGTTTCATTCA
TACTTCAAGTTTCAAGGCTCAGTGCAATGAGtagttaaatattttttatc
tagTAAAATCAATTTACCTTTTTTTAAGTTCGTTAGttcaaattttttgt
atttttataagatttcataaattacttaATTAGGGTATGATAATGATACT
TAGTTTTTTATCTAATTATATTAATTAGTTTAGGTTTTTCAGTTGGAAAC
CTGGGTACATCTGGTCTAATATTTTATGATGATAAGTCCTCCTGTTTAAT
CTACTTGGAAATTGGCcagggggcagtgggtttactaAAAGACTCTTAAA
GTTGCGCCTTTACAGCAAAACAATCTGAATTTTCGAGCAATAATGTGCAA
TTTCTCctggatttgctgaaatttccactcTTATAGTGCATTTATCGAAA
GTTAACCCTTACACTGCATTTCATTTCTGCTTTCTTGAAAAAACATACAC
TTTGTGCGGCGGGCACATATCCGTCGGTCAATTTTGCCTGACCCATCCAC
CGGGGTAATTAACGCATTCACACAATGAATCGCTAGAAATGGAAACTTCC
CCTTAtgttttaaaatacttttttcacaCGCATCAACGTTATGacgttat
ttgttttttttaagattcttCAAATATTAATCAAATTGTTTTCTccaatg
aaatttattttctgaaaCTTGGATTTATATGTAGTCCTGAAGTCCTCTTC
CAGCATAAACCTCTGATTGAATAAGAAaggatt Run BLAST on NCBI transcript from alignment at sc0000127:127789..128721 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011412 ID=TCONS_00011412|Name=TCONS_00011412|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at sc0000127:127789..128721 (Clytia hemisphaerica)
aatcctTTCTTATTCAATCAGAGGTTTATGCTGGAAGAGGACTTCAGGAC
TACATATAAATCCAAGtttcagaaaataaatttcattggAGAAAACAATT
TGATTAATATTTGaagaatcttaaaaaaaacaaataacgtCATAACGTTG
ATGCGtgtgaaaaaagtattttaaaacaTAAGGGGAAGTTTCCATTTCTA
GCGATTCATTGTGTGAATGCGTTAATTACCCCGGTGGATGGGTCAGGCAA
AATTGACCGACGGATATGTGCCCGCCGCACAAAGTGTATGTTTTTTCAAG
AAAGCAGAAATGAAATGCAGTGTAAGGGTTAACTTTCGATAAATGCACTA
TAAgagtggaaatttcagcaaatccagGAGAAATTGCACATTATTGCTCG
AAAATTCAGATTGTTTTGCTGTAAAGGCGCAACTTTAAGAGTCTTTtagt
aaacccactgccccctgGCCAATTTCCAAGTAGATTAAACAGGAGGACTT
ATCATCATAAAATATTAGACCAGATGTACCCAGGTTTCCAACTGAAAAAC
CTAAACTAATTAATATAATTAGATAAAAAACTAAGTATCATTATCATACC
CTAATtaagtaatttatgaaatcttataaaaatacaaaaaatttgaaCTA
ACGAACTTAAAAAAAGGTAAATTGATTTTActagataaaaaatatttaac
taCTCATTGCACTGAGCCTTGAAACTTGAAGTATGAATGAAACATCAAAC
AACTTAGGTGAAAGTTTATGAACGcaaaaaatattcttgaaaagtttgag
aaaagtaaaattccaaaaacacccccttctcacagacccactgggaaccc
ttcccactggaaaaattggcaagAATTTCCCACCGTCACTAATTTCCCcg
tccccactgaattttctgacttgaaaacaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011412-exon-sc0000127-1491911889:127789..128721 | TCONS_00011412-exon-sc0000127-1491911889:127789..128721 | Clytia hemisphaerica | exon |
| TCONS_00011412-exon-sc0000127-1510915933:127789..128721 | TCONS_00011412-exon-sc0000127-1510915933:127789..128721 | Clytia hemisphaerica | exon |
| TCONS_00011412-exon-sc0000127-1575043694:127789..128721 | TCONS_00011412-exon-sc0000127-1575043694:127789..128721 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127 | supercontig | sc0000127:127789..128721 . |
Blast
The following BLAST results are available for this feature:
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