TCONS_00011408 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011408
Unique NameTCONS_00011408
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011408 ID=TCONS_00011408|Name=TCONS_00011408|organism=Clytia hemisphaerica|type=transcript|length=163bp
CCATCATCGATGGACATAACAAAGCAGTACTCAAAAAGCAAGACATCGTA
CAACCAACCAAAACATGCAACTGCATCGTCAAAAATCAATGCCCCATGAA
CGGTAACTGCTTAGCTAAAAACACTGTTTACGAAGCCACACTGACAACAG
ACGACGAGAATTT
Run BLAST on NCBI

transcript from alignment at sc0000127:35067..35229

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011408 ID=TCONS_00011408|Name=TCONS_00011408|organism=Clytia hemisphaerica|type=transcript|length=163bp|location=Sequence derived from alignment at sc0000127:35067..35229 (Clytia hemisphaerica)
AAATTCTCGTCGTCTGTTGTCAGTGTGGCTTCGTAAACAGTGTTTTTAGC
TAAGCAGTTACCGTTCATGGGGCATTGATTTTTGACGATGCAGTTGCATG
TTTTGGTTGGTTGTACGATGTCTTGCTTTTTGAGTACTGCTTTGTTATGT
CCATCGATGATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006394XLOC_006394Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011408-exon-sc0000127-1491911889:35067..35229TCONS_00011408-exon-sc0000127-1491911889:35067..35229Clytia hemisphaericaexon
TCONS_00011408-exon-sc0000127-1510915933:35067..35229TCONS_00011408-exon-sc0000127-1510915933:35067..35229Clytia hemisphaericaexon
TCONS_00011408-exon-sc0000127-1575043694:35067..35229TCONS_00011408-exon-sc0000127-1575043694:35067..35229Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:35067..35229 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011408 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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