TCONS_00011377 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011377
Unique NameTCONS_00011377
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3072

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011377 ID=TCONS_00011377|Name=TCONS_00011377|organism=Clytia hemisphaerica|type=transcript|length=3072bp
TTATTTTTCACTACACCATGTTtgcaaaattcgcaaaattgcTTTCTact
aaatcaaaacattttattttcagaaataaTTTAAACATTGTATTTATGTC
TTTGTTAGGTTTCTAATTACTGAGAAAAATGTCCGCTAATTTTATTAGGT
CTCTTGGTAATATTTTGTAATTCATTCATGACACAGTCTTCCCAAGATTC
GTTTGGAAAACTTAAatacttacttttttcttttgttttagattGTCGGC
CAAATTGCAAGTTTGTGTCAACAGGCCGTGATACAGCATgcatcaaaata
ttgaaagaagTTGAAATAGGGGAAGAATTAGTTTGTAACTATGGGGACGA
CTTCTTTGGGGATGATAACTGTTTTTGTGAATGCATCACTTGTGAGAGGC
GAGGAACAGGTGCATTTTCGAAAGAGACAAATGAAGAAggtaaagaagaa
gaaaagaagattGGGAAATATGGTTTACGTGACACTGACAAACGAATATC
CAGGTTGAAACGCTTGAAAGAAGaAGTCTCAACGGACGAAGAATCACTCA
GTCAAAGTAATTCTCCAACTTCATTTAGCAAGACCTACTTGATGCGAACC
AGGAACACCTTAGAACAGAAGAAAAAACGAGAAGAGAAACAAATCACTGC
TGAACTCAAAATGAAATATGGCACATACATTGATTTAATACCTGACTTGA
AAGACCTTCCATATTTTGAGTTGCTATTTGTTGAACGCGAAAACCGTAAT
CGTCCTGTTAGTATTCCAATTATAGATAAAATGAAGGCTAATGAACAAAT
GCCAAAGAGATTTTCACTGCCTTACGGGAACAAGCCAAGTGGTTCTGGCG
GTACGAAAATGGAAGATCGTGTGAGCACTTTGAAAAGAACTTGGTCATCT
AGCAATATATCTGAAGTTTCAACTTCTAGTGCTGATACCTCTGATATTGA
TGACGACTCTTATGACTACCACCGTCGATCTCCTTTAATAAGGCGTGAAT
TCACATCCTCTGTTTCCAGCGAGAGCTTGAAATTGACAATTAAACTGAAA
CCGACAGTGACCTCCCGAAACAGAAAAGCGTCTTCCAGCAGTGAAACGTC
TGTAGAGTCTTCACACAGCTCATATCAAAAACGAAAATCGATTTGTACCC
CGAAAGGAGTTCGCTCGTCCGCAAGATTAAGATCGGGGTTGGTAAGAGAT
CAGGTACCAGATAGCTCTCATTCCCATTCATTTACCTCCTCAAAGCACCA
CCACCATAAACATTACACCACTTCTTTGTCTAAGCGAAATCGTATTATCA
TCCAAAAGAAATGTGCTTGTTGTCATTGAGAAATTACTGTAATTAATTCA
CGTGGATCTGTGCGTCGTAAGAGATTTCATTCATAATTGGCACTTTAGTT
TACTATGATGAGGTACTGTTTATTTTGTCGCGCTCACTCGTTTCCaagaa
atgggaatcttatcaCGAAAAGTGAGCTTGTATTTGTCTTTGGAAACCAT
GTCAATAACGAGTGCACACTTAACATGAATACTTCAATagaaaatcaaaa
tgatgaaaaaggaaaacattaattttattggttaaatagtatattttcaa
tttctttcccacttcctgattttttgcaacACATGCGATGATATTCACTT
TTAGGGTTTTGCTGTACAGCATTGTTCCTAAGGTATTTTCAGCtttctga
tgtttttttttggaggGGTCGATCAGTATCGTGAATGTAGCTTGAAATAC
ATGGGGATAAGAgacgtcgcatcaaaataaaaaagctttaagtccatttt
tgttatttttccttaaatcctgaaaaaccattaacatttgaaatattttt
tgtgttaGAAAAGCCATTAGTCCAAAATTGTTTCCACTCTGGACTTCAGG
CTTTTTTGCCCTAAATTGATGTGAATTAAAGCTTTTTTACcctgaaaata
aagtgaaaattcttatttttctaaaagctgtAAATTAGGCCACTTTTGGT
TGGTTTTTGTTggatttgagccaaaaaatcgacaaaaaatggggtgtaaa
gcatcggtaaggtcataactcaattttccaaaaaatggacttaaagcttt
tttattttgatgtgatGGATTGGTGAATAATCACTTTTCTATGATCATTT
ATTTCGCTTGAACTTTACCAtattttttgaccttttttatttttaacaat
agCTGCCTACTCCTTGCGCTTTTTCCAACAAAAATACCTTATGGAATAAT
CCCTCAAAATTGTTTCTTTTCTCCATTCTTCCCTTTTGGCATTTTCTTTT
CCGTACTTactcttttatttctttttttactttaagTACAACTTTTTCAT
CTAGTTTTTATGGATAAAGTATTTCTATCGAGACTACTTTTATTTCGTCG
ATTATATTACGAGGTGTAAACAAATCAATTTATGAAACTTCTTACCTAAT
ATTTATTTTGTACAGTTTATTATGATGCATTATTTTACAATGGATAACAT
ACTACTACTATAATTATATAGTAAAGCAAAATTAAAGTTACTTTTTTTGG
GAGCTCAAATCCGTTCCATAAGAATTGGCAGTCTGCACAATTTTAAATAT
TGCTCTTGAAGGAGAATTATATTATTAAaagtaatacacgtttttttttt
ataaggaaccttaactttgctctgagcctggagttccttatttttacaga
gaatttcagtctcaaagttccttatcgtgttccttactacataggaaatt
ttgaactttttgccccttgaaggatcaaaatttggtcaaattagtcccat
tattttacattattttcaaatccacttattctcagcctgagcagttcctt
aacaattccttattttttgaaccattttcagcctcgagttccttataaac
gtgttccttataataaaaaaaaaagtaccTCGTTGAAAAGGTCATCTTAA
GCGGATCATTTTAAGAGTTCAGAATTATATCTTTTCTCCTTCAAGACCAa
tgtacacgtgtttttataaaaacatccaaaatttttgaagccttcggatg
ttcttaactttttgagttttaa
Run BLAST on NCBI

protein sequence of TCONS_00011377-protein

>TCONS_00011377-protein ID=TCONS_00011377-protein|Name=TCONS_00011377-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
MTQSSQDSFGKLKYLLFSFVLDCRPNCKFVSTGRDTACIKILKEVEIGEE
LVCNYGDDFFGDDNCFCECITCERRGTGAFSKETNEEGKEEEKKIGKYGL
RDTDKRISRLKRLKEEVSTDEESLSQSNSPTSFSKTYLMRTRNTLEQKKK
REEKQITAELKMKYGTYIDLIPDLKDLPYFELLFVERENRNRPVSIPIID
KMKANEQMPKRFSLPYGNKPSGSGGTKMEDRVSTLKRTWSSSNISEVSTS
SADTSDIDDDSYDYHRRSPLIRREFTSSVSSESLKLTIKLKPTVTSRNRK
ASSSSETSVESSHSSYQKRKSICTPKGVRSSARLRSGLVRDQVPDSSHSH
SFTSSKHHHHKHYTTSLSKRNRIIIQKKCACCH
Run BLAST on NCBI

transcript from alignment at sc0000127:100973..106946-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011377 ID=TCONS_00011377|Name=TCONS_00011377|organism=Clytia hemisphaerica|type=transcript|length=5974bp|location=Sequence derived from alignment at sc0000127:100973..106946- (Clytia hemisphaerica)
TTATTTTTCACTACACCATGTTTGCAAAATTCGCAAAATTGCTTTCTACT
AAATCAAAACATTTTATTTTCAGAAATAATTTAAACATTGTATTTATGTC
TTTGTTAGGTTTCTAATTACTGAGAAAAATGTCCGCTAATTTTATTAGGT
CTCTTGGTAATATTTTGTAATTCATTCATGACACAGTCTTCCCAAGATTC
GTTTGGAAAACTTAAATACTTACTTTTTTCTTTTGTTTTAGATTGTCGGC
CAAATTGCAAGGTAAGATTATCAAATCTAACAATTTCCCGTACAATTATA
ATCTTTGAGCATGAAATTATTTCTAGTTCTTCTCTAGTTATTGTAGAGTT
TTCACAGTTAGGCACACACTGGGACTCTAACCCGATTGTCTTAAAATCAT
GTTGTTTCCGTAACTCCTCGAAAATTGCCAGAATGCCGAAAACCGACATA
AAACGGGTTTCCTTCATTTTTTCTCGATTCTTACTCAACAAATTTTCGTG
AGTTTTTGCACAATTTAGCAAAATGTGACAGAGCCAGCCTGATTTCCAAA
AAAAGAATCTTTTGCAATCGCCAGATCCAGCAATGTCAATTAGAAAATGT
TTTTTGGGATTTTCTCATTAGTTTTCACTGTTCTTTTGTTTTGTTTTTTT
TAATTTATAGTTTCTGTTGAATAGCAAGGAAGGTCTATAAAAATGTCACT
TGTAAATAATAAAATTCTAAGTTGAAATTCTTCTATTCTTGTCTTTAGTT
TGTGTCAACAGGCCGTGATACAGCATGCATCAAAATATTGAAAGAAGTTG
AAATAGGGGAAGAATTAGTTTGTAACTATGGGGACGACTTCTTTGGGGAT
GATAACTGTTTTTGTGAATGCATCACTTGTGAGAGGTACGATAATATACC
ACCATCTTATGTTAGGAATTCATTTAGTTGAGAACCTGTGAGAACTCCTT
TTTTTATTTATTTGGAACAAACATTGCAAATTTTAGGTCTTGCCAAAAGA
TATAGGTGAACTGTAATCAAGCTTGTAAGATTCAGAAAATTTCAAATTCA
TTTTAATGGCAGTATATTACCTTTGTCTGTTTAAATAAAGGACTTTAATA
AATCACTATTTCGTTAGCCAATAAAGGGATCAAACTAAGCACATGGCGGT
ATCCCTCGAATTTTAAGGGGGCACCCCCTACTGGAGAAAAATGCACATGG
CTCTGATCTCCAAAATTATCAAAGGGGTAATTTTTGCAGGACTTAATTTT
GCAGATAAGATTGTCGAATACAATATTTTGCAAATTCAGTGTCAAACTCA
CTGTTGATATTTATTAATGAAAACCGCTAATTTGCACTTATTGACACCAG
TGAGCCAGTGATACCAGTAATAATTTCTTTTGAGAATTTTACAAATAGAA
ACCACCTGAAATCCAAAATATTTCATCTTCAATCCTTTATCTCATTGAAG
TAATTAATTGGTGTTGTTTCTACTCAGGCGAGGAACAGGCGCATTTTCGA
AAGNAATTAATTGGTGTTGTTTCTACTCAGGCGAGGAACAGGTGCATTTT
CGAAAGAGACAAATGAAGAAGGTAAAGAAGAAGAAAAGAAGATTGGGAAA
TATGGTTTACGTGACACTGACAAACGAATATCCAGGTTGAAACGCTTGAA
AGAAGGTCGGTATTGACAACCCTGTAAGGGGTTTGAGAAAGTCTCAATTA
TTATTGGGCTTTTAGTCTTAGGGGGGGGCTCAAACCTTTTTACCAAATAG
ATTTATCATTTTGTGTCATTTTGTGTTTTTTTGCTTGCTTTTTGGACCTA
CCACCGGTGGTCCTATAAATTAACCCCTGTCCGTTCGTCCGTCCGTCTGT
TACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGGAC
TATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAG
AAAAAATTTATTTGGGCAAATTTGTGCCAAAAACTACCTAAAAATAGGGT
TTTTTGGACTTTGTGCAAAATCCTGTGATTACTTTTTTCTGATTTTTTGT
ACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTATTTCC
CGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAA
TTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTTACTCATT
ATTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATG
TGTCGGAGCCCGATTTTCGAAAAAAAAAATGTTTGGGGAAATTTGGGCCA
AAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTATCAT
TACTTTTTTCTGATTTTTTTTACAAAGATGGAGGGCAAGATTCTCTAAAG
AATGACTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTATTCGCCTTAAAAG
ACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATAT
AGCTTTTCTCAATGTTGACTCATTATTTTTTCAGATTTTTTGCACAATGA
TGCAAAATAAAAATACCTAAAATGTGACGAAGCCCGATTTTCAAAAAACA
TTTTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACTGGTTTTTT
GGCATTTTCTCAAGATTTTATCATTAGTTTTTTCTAATTTTTTGCTTAAA
GATGCGTATTAACAATGCCCAAAACATGGGCGAGTTCAATTTTTGACAAA
AAAAATTTTCCGGTTGAAAATGCCAGAAATCGCCGTGTTTGCAGATTTTC
ATTGGATTTTTTCCTTATATTCATTTCTATGTTTTTTACACAAAAAAATT
ATTGATAACAATGCTCACCATCAACCATGATTCAATTGTCAATAAAACTG
ATTTTTGCGACCAGAACTTTCTATTTATTTTTTCCCTACAACCCTTCCCT
CTCCCCCCATCAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAACGCTATATTTTCTGACTGATTTTTTTTCATTTTT
CTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCAT
CTAGCTTGTTTTGTTTCTAGCGATATGTTCTTTGAAAAGAAAAATAGTTT
TCAGTTTAAATAGCCTGCTATATTTTGATACTGTAGTCTTCGGCTGTTAA
CAGTTCCCTCATTTCTTTCTTTTAGAAGTCTCAACGGACGAAGAATCACT
CAGTCAAAGTAATTCTCCAACTTCATTTAGCAAGACCTACTTGATGCGAA
CCAGGAACACCTTAGAACAGAAGAAAAAACGAGAAGAGAAACAAATCACT
GCTGAACTCAAAATGAAATATGGCACATACATTGATTTAATACCTGACTT
GAAAGACCTTCCATATTTTGAGTTGCTATTTGTTGAACGCGAAAACCGTA
ATCGTCCTGTTAGTATTCCAATTATAGATAAAATGAAGGCTAATGAACAA
ATGCCAAAGAGATTTTCACTGCCTTACGGGAACAAGCCAAGTGGTTCTGG
CGGTACGAAAATGGAAGATCGTGTGAGCACTTTGAAAAGAACTTGGTCAT
CTAGCAATATATCTGAAGTTTCAACTTCTAGTGCTGATACCTCTGATATT
GATGACGACTCTTATGACTACCACCGTCGATCTCCTTTAATAAGGCGTGA
ATTCACATCCTCTGTTTCCAGCGAGAGCTTGAAATTGACAATTAAACTGA
AACCGACAGTGACCTCCCGAAACAGAAAAGCGTCTTCCAGCAGTGAAACG
TCTGTAGAGTCTTCACACAGCTCATATCAAAAACGAAAATCGATTTGTAC
CCCGAAAGGAGTTCGCTCGTCCGCAAGATTAAGATCGGGGTTGGTAAGAG
ATCAGGTACCAGATAGCTCTCATTCCCATTCATTTACCTCCTCAAAGCAC
CACCACCATAAACATTACACCACTTCTTTGTCTAAGCGAAATCGTATTAT
CATCCAAAAGAAATGTGCTTGTTGTCATTGAGAAATTACTGTAATTAATT
CACGTGGATCTGTGCGTCGTAAGAGATTTCATTCATAATTGGCACTTTAG
TTTACTATGATGAGGTACTGTTTATTTTGTCGCGCTCACTCGTTTCCAAG
AAATGGGAATCTTATCACGAAAAGTGAGCTTGTATTTGTCTTTGGAAACC
ATGTCAATAACGAGTGCACACTTAACATGAATACTTCAATAGAAAATCAA
AATGATGAAAAAGGAAAACATTAATTTTATTGGTTAAATAGTATATTTTC
AATTTCTTTCCCACTTCCTGATTTTTTGCAACACATGCGATGATATTCAC
TTTTAGGGTTTTGCTGTACAGCATTGTTCCTAAGGTATTTTCAGCTTTCT
GATGTTTTTTTTTGGAGGGGTCGATCAGTATCGTGAATGTAGCTTGAAAT
ACATGGGGATAAGAGACGTCGCATCAAAATAAAAAAGCTTTAAGTCCATT
TTTGTTATTTTTCCTTAAATCCTGAAAAACCATTAACATTTGAAATATTT
TTTGTGTTAGAAAAGCCATTAGTCCAAAATTGTTTCCACTCTGGACTTCA
GGCTTTTTTGCCCTAAATTGATGTGAATTAAAGCTTTTTTACCCTGAAAA
TAAAGTGAAAATTCTTATTTTTCTAAAAGCTGTAAATTAGGCCACTTTTG
GTTGGTTTTTGTTGGATTTGAGCCAAAAAATCGACAAAAAATGGGGTGTA
AAGCATCGGTAAGGTCATAACTCAATTTTCCAAAAAATGGACTTAAAGCT
TTTTTATTTTGATGTGATGGATTGGTGAATAATCACTTTTCTATGATCAT
TTATTTCGCTTGAACTTTACCATATTTTTTGACCTTTTTTATTTTTAACA
ATAGCTGCCTACTCCTTGCGCTTTTTCCAACAAAAATACCTTATGGAATA
ATCCCTCAAAATTGTTTCTTTTCTCCATTCTTCCCTTTTGGCATTTTCTT
TTCCGTACTTACTCTTTTATTTCTTTTTTTACTTTAAGTACAACTTTTTC
ATCTAGTTTTTATGGATAAAGTATTTCTATCGAGACTACTTTTATTTCGT
CGATTATATTACGAGGTGTAAACAAATCAATTTATGAAACTTCTTACCTA
ATATTTATTTTGTACAGTTTATTATGATGCATTATTTTACAATGGATAAC
ATACTACTACTATAATTATATAGTAAAGCAAAATTAAAGTTACTTTTTTT
GGGAGCTCAAATCCGTTCCATAAGAATTGGCAGTCTGCACAATTTTAAAT
ATTGCTCTTGAAGGAGAATTATATTATTAAAAGTAATACACGTTTTTTTT
TTATAAGGAACCTTAACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTACA
GAGAATTTCAGTCTCAAAGTTCCTTATCGTGTTCCTTACTACATAGGAAA
TTTTGAACTTTTTGCCCCTTGAAGGATCAAAATTTGGTCAAATTAGTCCC
ATTATTTTACATTATTTTCAAATCCACTTATTCTCAGCCTGAGCAGTTCC
TTAACAATTCCTTATTTTTTGAACCATTTTCAGCCTCGAGTTCCTTATAA
ACGTGTTCCTTATAATAAAAAAAAAAGTACCTCGTTGAAAAGGTCATCTT
AAGCGGATCATTTTAAGAGTTCAGAATTATATCTTTTCTCCTTCAAGACC
AATGTACACGTGTTTTTATAAAAACATCCAAAATTTTTGAAGCCTTCGGA
TGTTCTTAACTTTTTGAGTTTTAA

Coding sequence (CDS) from alignment at sc0000127:100973..106946-

>TCONS_00011377 ID=TCONS_00011377|Name=TCONS_00011377|organism=Clytia hemisphaerica|type=CDS|length=4608bp|location=Sequence derived from alignment at sc0000127:100973..106946- (Clytia hemisphaerica)
AAGTCTCAACGGACGAAGAATCACTCAGTCAAAGTAATTCTCCAACTTCA
TTTAGCAAGACCTACTTGATGCGAACCAGGAACACCTTAGAACAGAAGAA
AAAACGAGAAGAGAAACAAATCACTGCTGAACTCAAAATGAAATATGGCA
CATACATTGATTTAATACCTGACTTGAAAGACCTTCCATATTTTGAGTTG
CTATTTGTTGAACGCGAAAACCGTAATCGTCCTGTTAGTATTCCAATTAT
AGATAAAATGAAGGCTAATGAACAAATGCCAAAGAGATTTTCACTGCCTT
ACGGGAACAAGCCAAGTGGTTCTGGCGGTACGAAAATGGAAGATCGTGTG
AGCACTTTGAAAAGAACTTGGTCATCTAGCAATATATCTGAAGTTTCAAC
TTCTAGTGCTGATACCTCTGATATTGATGACGACTCTTATGACTACCACC
GTCGATCTCCTTTAATAAGGCGTGAATTCACATCCTCTGTTTCCAGCGAG
AGCTTGAAATTGACAATTAAACTGAAACCGACAGTGACCTCCCGAAACAG
AAAAGCGTCTTCCAGCAGTGAAACGTCTGTAGAGTCTTCACACAGCTCAT
ATCAAAAACGAAAATCGATTTGTACCCCGAAAGGAGTTCGCTCGTCCGCA
AGATTAAGATCGGGGTTGGTAAGAGATCAGGTACCAGATAGCTCTCATTC
CCATTCATTTACCTCCTCAAAGCACCACCACCATAAACATTACACCACTT
CTTTGTCTAAGCGAAATCGTATTATCATCCAAAAGAAATGTGCTTGTTGT
CATTGAGCGAGGAACAGGTGCATTTTCGAAAGAGACAAATGAAGAAGGTA
AAGAAGAAGAAAAGAAGATTGGGAAATATGGTTTACGTGACACTGACAAA
CGAATATCCAGGTTGAAACGCTTGAAAGAAGTTTGTGTCAACAGGCCGTG
ATACAGCATGCATCAAAATATTGAAAGAAGTTGAAATAGGGGAAGAATTA
GTTTGTAACTATGGGGACGACTTCTTTGGGGATGATAACTGTTTTTGTGA
ATGCATCACTTGTGAGAGATGACACAGTCTTCCCAAGATTCGTTTGGAAA
ACTTAAATACTTACTTTTTTCTTTTGTTTTAGATTGTCGGCCAAATTGCA
AGAAGTCTCAACGGACGAAGAATCACTCAGTCAAAGTAATTCTCCAACTT
CATTTAGCAAGACCTACTTGATGCGAACCAGGAACACCTTAGAACAGAAG
AAAAAACGAGAAGAGAAACAAATCACTGCTGAACTCAAAATGAAATATGG
CACATACATTGATTTAATACCTGACTTGAAAGACCTTCCATATTTTGAGT
TGCTATTTGTTGAACGCGAAAACCGTAATCGTCCTGTTAGTATTCCAATT
ATAGATAAAATGAAGGCTAATGAACAAATGCCAAAGAGATTTTCACTGCC
TTACGGGAACAAGCCAAGTGGTTCTGGCGGTACGAAAATGGAAGATCGTG
TGAGCACTTTGAAAAGAACTTGGTCATCTAGCAATATATCTGAAGTTTCA
ACTTCTAGTGCTGATACCTCTGATATTGATGACGACTCTTATGACTACCA
CCGTCGATCTCCTTTAATAAGGCGTGAATTCACATCCTCTGTTTCCAGCG
AGAGCTTGAAATTGACAATTAAACTGAAACCGACAGTGACCTCCCGAAAC
AGAAAAGCGTCTTCCAGCAGTGAAACGTCTGTAGAGTCTTCACACAGCTC
ATATCAAAAACGAAAATCGATTTGTACCCCGAAAGGAGTTCGCTCGTCCG
CAAGATTAAGATCGGGGTTGGTAAGAGATCAGGTACCAGATAGCTCTCAT
TCCCATTCATTTACCTCCTCAAAGCACCACCACCATAAACATTACACCAC
TTCTTTGTCTAAGCGAAATCGTATTATCATCCAAAAGAAATGTGCTTGTT
GTCATTGAGCGAGGAACAGGTGCATTTTCGAAAGAGACAAATGAAGAAGG
TAAAGAAGAAGAAAAGAAGATTGGGAAATATGGTTTACGTGACACTGACA
AACGAATATCCAGGTTGAAACGCTTGAAAGAAGTTTGTGTCAACAGGCCG
TGATACAGCATGCATCAAAATATTGAAAGAAGTTGAAATAGGGGAAGAAT
TAGTTTGTAACTATGGGGACGACTTCTTTGGGGATGATAACTGTTTTTGT
GAATGCATCACTTGTGAGAGATGACACAGTCTTCCCAAGATTCGTTTGGA
AAACTTAAATACTTACTTTTTTCTTTTGTTTTAGATTGTCGGCCAAATTG
CAAGAAGTCTCAACGGACGAAGAATCACTCAGTCAAAGTAATTCTCCAAC
TTCATTTAGCAAGACCTACTTGATGCGAACCAGGAACACCTTAGAACAGA
AGAAAAAACGAGAAGAGAAACAAATCACTGCTGAACTCAAAATGAAATAT
GGCACATACATTGATTTAATACCTGACTTGAAAGACCTTCCATATTTTGA
GTTGCTATTTGTTGAACGCGAAAACCGTAATCGTCCTGTTAGTATTCCAA
TTATAGATAAAATGAAGGCTAATGAACAAATGCCAAAGAGATTTTCACTG
CCTTACGGGAACAAGCCAAGTGGTTCTGGCGGTACGAAAATGGAAGATCG
TGTGAGCACTTTGAAAAGAACTTGGTCATCTAGCAATATATCTGAAGTTT
CAACTTCTAGTGCTGATACCTCTGATATTGATGACGACTCTTATGACTAC
CACCGTCGATCTCCTTTAATAAGGCGTGAATTCACATCCTCTGTTTCCAG
CGAGAGCTTGAAATTGACAATTAAACTGAAACCGACAGTGACCTCCCGAA
ACAGAAAAGCGTCTTCCAGCAGTGAAACGTCTGTAGAGTCTTCACACAGC
TCATATCAAAAACGAAAATCGATTTGTACCCCGAAAGGAGTTCGCTCGTC
CGCAAGATTAAGATCGGGGTTGGTAAGAGATCAGGTACCAGATAGCTCTC
ATTCCCATTCATTTACCTCCTCAAAGCACCACCACCATAAACATTACACC
ACTTCTTTGTCTAAGCGAAATCGTATTATCATCCAAAAGAAATGTGCTTG
TTGTCATTGAGCGAGGAACAGGTGCATTTTCGAAAGAGACAAATGAAGAA
GGTAAAGAAGAAGAAAAGAAGATTGGGAAATATGGTTTACGTGACACTGA
CAAACGAATATCCAGGTTGAAACGCTTGAAAGAAGTTTGTGTCAACAGGC
CGTGATACAGCATGCATCAAAATATTGAAAGAAGTTGAAATAGGGGAAGA
ATTAGTTTGTAACTATGGGGACGACTTCTTTGGGGATGATAACTGTTTTT
GTGAATGCATCACTTGTGAGAGATGACACAGTCTTCCCAAGATTCGTTTG
GAAAACTTAAATACTTACTTTTTTCTTTTGTTTTAGATTGTCGGCCAAAT
TGCAAGAAGTCTCAACGGACGAAGAATCACTCAGTCAAAGTAATTCTCCA
ACTTCATTTAGCAAGACCTACTTGATGCGAACCAGGAACACCTTAGAACA
GAAGAAAAAACGAGAAGAGAAACAAATCACTGCTGAACTCAAAATGAAAT
ATGGCACATACATTGATTTAATACCTGACTTGAAAGACCTTCCATATTTT
GAGTTGCTATTTGTTGAACGCGAAAACCGTAATCGTCCTGTTAGTATTCC
AATTATAGATAAAATGAAGGCTAATGAACAAATGCCAAAGAGATTTTCAC
TGCCTTACGGGAACAAGCCAAGTGGTTCTGGCGGTACGAAAATGGAAGAT
CGTGTGAGCACTTTGAAAAGAACTTGGTCATCTAGCAATATATCTGAAGT
TTCAACTTCTAGTGCTGATACCTCTGATATTGATGACGACTCTTATGACT
ACCACCGTCGATCTCCTTTAATAAGGCGTGAATTCACATCCTCTGTTTCC
AGCGAGAGCTTGAAATTGACAATTAAACTGAAACCGACAGTGACCTCCCG
AAACAGAAAAGCGTCTTCCAGCAGTGAAACGTCTGTAGAGTCTTCACACA
GCTCATATCAAAAACGAAAATCGATTTGTACCCCGAAAGGAGTTCGCTCG
TCCGCAAGATTAAGATCGGGGTTGGTAAGAGATCAGGTACCAGATAGCTC
TCATTCCCATTCATTTACCTCCTCAAAGCACCACCACCATAAACATTACA
CCACTTCTTTGTCTAAGCGAAATCGTATTATCATCCAAAAGAAATGTGCT
TGTTGTCATTGAGCGAGGAACAGGTGCATTTTCGAAAGAGACAAATGAAG
AAGGTAAAGAAGAAGAAAAGAAGATTGGGAAATATGGTTTACGTGACACT
GACAAACGAATATCCAGGTTGAAACGCTTGAAAGAAGTTTGTGTCAACAG
GCCGTGATACAGCATGCATCAAAATATTGAAAGAAGTTGAAATAGGGGAA
GAATTAGTTTGTAACTATGGGGACGACTTCTTTGGGGATGATAACTGTTT
TTGTGAATGCATCACTTGTGAGAGATGACACAGTCTTCCCAAGATTCGTT
TGGAAAACTTAAATACTTACTTTTTTCTTTTGTTTTAGATTGTCGGCCAA
ATTGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006379XLOC_006379Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011377-exon-sc0000127-1575043694:106686..106946TCONS_00011377-exon-sc0000127-1575043694:106686..106946Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1575043694:106062..106198TCONS_00011377-exon-sc0000127-1575043694:106062..106198Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1575043694:105292..105416TCONS_00011377-exon-sc0000127-1575043694:105292..105416Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1575043694:100973..103521TCONS_00011377-exon-sc0000127-1575043694:100973..103521Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1510915933:106686..106946TCONS_00011377-exon-sc0000127-1510915933:106686..106946Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1510915933:106062..106198TCONS_00011377-exon-sc0000127-1510915933:106062..106198Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1510915933:105292..105416TCONS_00011377-exon-sc0000127-1510915933:105292..105416Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1510915933:100973..103521TCONS_00011377-exon-sc0000127-1510915933:100973..103521Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1491911889:106686..106946TCONS_00011377-exon-sc0000127-1491911889:106686..106946Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1491911889:106062..106198TCONS_00011377-exon-sc0000127-1491911889:106062..106198Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1491911889:105292..105416TCONS_00011377-exon-sc0000127-1491911889:105292..105416Clytia hemisphaericaexon
TCONS_00011377-exon-sc0000127-1491911889:100973..103521TCONS_00011377-exon-sc0000127-1491911889:100973..103521Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011377-proteinTCONS_00011377-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:100973..106946 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.2085	20.306	4.27038	2.02703	14.9785	11.6635	15.4834	15.9919	7.60239	9.46944	8.94532	8.37423	8.90854	9.77588	7.45769	8.71656	8.00181	9.26817	9.03024	8.55757	8.70586	8.94528	30.5502	30.2711	11.457	12.4038	8.86722	8.30847	24.3615	27.0816
Blast
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BLAST of TCONS_00011377 vs. Swiss-Prot (Human)
Match: KMT5B (Histone-lysine N-methyltransferase KMT5B OS=Homo sapiens GN=KMT5B PE=1 SV=4)

HSP 1 Score: 105.145 bits (261), Expect = 6.840e-23
Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:  241 DCRPNCKFVSTGRDTACIKILKEVEIGEELVCNYXXXXXXXXNCFCECITCERRGTGAFSXXXXXXXXXXXXXXXXXXLRDTDKRISRLKRLKE----------EVSTDEESLSQSNSPTSFSKTYLMRTRNT 609
            DCRPNCKFVSTGRDTAC+K L+++E GEE+ C YGD FFG++N FCEC TCERRGTGAF K              KYGLR+TDKR++RLK+L +            +TD ++  + N+ TS  K+ +   +N+
Sbjct:  274 DCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGAF-KSRVGLPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDSQSVSSNTDADTTQEKNNATSNRKSSVGVKKNS 405
The following BLAST results are available for this feature:
BLAST of TCONS_00011377 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KMT5B6.840e-2349.62Histone-lysine N-methyltransferase KMT5B OS=Homo s... [more]
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