TCONS_00011348 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011348
Unique NameTCONS_00011348
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length935

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011348 ID=TCONS_00011348|Name=TCONS_00011348|organism=Clytia hemisphaerica|type=transcript|length=935bp
AATAGATTAAAATCATATAAACAGATACATGATAGATCATTGATGTTTGA
ATTGATCGAATTTCTCGAACAAGATCTTTACAAAAATGGGTTCTTCCTTG
GAAAATGACATGGTGTGTCTCTTAGAGTCAATACAATGCCTTGGAAATGA
CAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCTGAaatggttttgc
aagATGAAGGTGCtacaatattttacaaattgaaTGGTATCAGCCTCATT
CATAAGTTGgcatttcaaaagaaaacaacaaGCTCCATTGTACAAAAGGC
CTTGATACTCCTCGGAAATTCTTCACTGTCGAATTATGAGAACAAGAATG
CTTTGTGCAATGATCAAATTATGGATTACTTGAAAAACAAGATCTTTGGT
GATCCGCCTAACTCCAAGATGATTGCTTCAGGATCTTATTTTATTGCGTG
TCTTTGTTCTGCAAATGataAAGTACAGAACAAAGCAAGGAATTCAAAGC
TTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCCATCCGAAAGGAGAA
ATACAGAACAATGTATCTAAAGAACAATGGTTTGAGAAAGCATCATCCAA
CTGTCCTGTTGTTCTCACTCATATCTCACATGCACTAAAGTCTTTGATGA
ATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTTCACGGTTGTTAAAC
TTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAGAAGATGCCAGGAT
AGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAGAATGAGAAGACac
aaaacatattcaatatgaTTGGTGGAATGAGAATCTTGTCTCAAGTCCTC
AAAACTGAGATGAAAAATGAATGCGACAACAAAGCTAAGAGGAATTTGGA
GTTAACCAAGACCTTATTGGATACAGTAACGGTCG
Run BLAST on NCBI

protein sequence of TCONS_00011348-protein

>TCONS_00011348-protein ID=TCONS_00011348-protein|Name=TCONS_00011348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MGSSLENDMVCLLESIQCLGNDKSQIIQALEHLAEMVLQDEGATIFYKLN
GISLIHKLAFQKKTTSSIVQKALILLGNSSLSNYENKNALCNDQIMDYLK
NKIFGDPPNSKMIASGSYFIACLCSANDKVQNKARNSKLLDKLVLLYRSF
HPKGEIQNNVSKEQWFEKASSNCPVVLTHISHALKSLMNKPRNVENQIVC
SRLLNLALSTLASGKYAEDARIEALQFIADCLYENEKTQNIFNMIGGMRI
LSQVLKTEMKNECDNKAKRNLELTKTLLDTVTV
Run BLAST on NCBI

transcript from alignment at sc0000127:264343..267404+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011348 ID=TCONS_00011348|Name=TCONS_00011348|organism=Clytia hemisphaerica|type=transcript|length=3062bp|location=Sequence derived from alignment at sc0000127:264343..267404+ (Clytia hemisphaerica)
AATAGATTAAAATCATATAAACAGATACATGATAGATCATTGATGTTTGA
ATTGATCGAATTTCTCGAACAAGATCTTTACAAAAATGGGTTCTTCCTTG
GAAAATGACATGGTGTGTCTCTTAGAGTCAATACAATGCCTTGGAAATGA
CAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCTGAaatggttttgc
aaggtaaagtaaaaaaattatgatgagGTTTTGAATTTTACTATACAGAA
AATAGGATATGTACGTATTTGaaagtaaattattttattttattttgtta
gttCGCTTTCACTATCTGGTCATTTATGTGATGTTTAAAGTCCATAATGT
CCTTATcaaattttttgtccattttagtaatttttttctgtGTTAGTTAT
TCTGTTATGTTATGTGGATAACTCAATCTAAAAACTATCATTTGCGGGCA
AAAGTTTCTCAAAATTGGGCCTGTGCAAAGAAAATTAAGCCTAACTCAAg
gtgtatttttttaaacttttcattcattttaataaggcaaaaaagttatt
tttcgcTGTTTTTACCTTTACAATGTACTTTCTCTTATTACATCCTTACT
GCGCAACCTTACTTCTGAACTAAGATTAATCTGTCCTGTCCTTCTGCTTA
TTTTTATAGATGAAGGTGCtacaatattttacaaattgaaTGGTATCAGC
CTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCCATTGTACA
AAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTGTAAGTAGA
TGCTGAGGATGAAAAAATTCCATGCTTTAACCAAGGAAATCGTTGatcct
tttttgtttgtttttttacattGAGTGAGAAACCAAGATTCGAATACTAA
AGTATTGTTGAAATTTAATGTTTACGAGAATCAGATTTTAATTTACCCGT
ATCCTGCCAGTCTTGAAATCTTTCATAAAAAAAGGaacgtttttttttca
gtttacaATGTCTGTTCTTTTTCCTTTGGAAAAggcagttttttttaaat
cgacattcaaattacaaacaaatgatattttttttaatcatatgAGCGAA
TCCTCTCTAATTCTTACAGATGAGAACAAGAATGCTTTGTGCAATGATCA
AATTATGGATTACTTGAAAAACAAGATCTTTGGTGATCCGCCTAACTCCA
AGATGATTGCTTCAGGATCTTATTTTATTGCGTGTCTTTGTTCTGCAAAT
GGTACAGTATCATgatttttatttatgatttctCTTGAAATGGCCTATTT
GTATCTATTGGTTTTGGTATTTTCTTTAGTTTGGTTTCGTGCTGTTTCGT
GACAAGTTTTGACACAATCTTACAATTAGTATCCAGTTAAGTGATTATAG
TTTTAATTATTCTTCATTTAGGTTCATTTTTTTGAACGTTTACATGCGAT
TTATAAGAGATTTTAATACAAAGTTTATCCaagtaaattttcattttaga
taAAGTACAGAACAAAGCAAGGAATTCAAAGCTTCTAGATAAATTAGTCT
TACTTTACAGGTTTGTAACATAAATTAGTTGCTCAGTGAATTGCATGAAT
TGTATGATAGTTGGTTGCCTTAGTCAAGTGACATGGTAATGAGAACTACA
TTGTATAGGTTGCAGATTtcacttcaaaaaaaaagaatcccGTAGAAACC
ATGACCTTCATGACGGGAATATTTTTGAGTATTGTACATTCTTTGACAAG
aagaataattatttttatgtGCTACTAAGATTCAAGATATAGGTATCATC
CAATGGTCCTGTGATTTTTTTGATGTTGGCTATATACTTTGAAATAAAGC
CAGAATTTTAACTTTTGGCAAATTCTTTTCTAGGAGTTTCCATCCGAAAG
GAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAGAAAGCATCA
TCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACTAAAGTCTTT
GATGAATAAACCTCGCAATGGTTCGTATAGTTTAAAGGACATTTTTTTTA
CTACTGtattaatgaaattgaatggATATCCAACATTGATCTAATATTTC
ATGTAATAGTATGTACTGTATTACTTCGAATGAACGCCCCCTTTTTTAAA
CGGCCcttttgaataaacgcccctcctaaaatccaaaaaaattgataaac
gcCCGGgtcgtttattcgaagtaatacggtattagCTTAGATTGATCAGG
CGAAAATCTTTTCAACGTTattttttccttgatttctttttttaaaacgT
ATTTCAGCAGAATGTTTCACTACAGCCTCTAGAACTGTTAATGTATCTGT
TAGTTTTCCTCCTCATATTGCTGCAATGTACTATGtatctgaaaaattat
ttttgaataatttgtttACAGTGGAAAACCAAATAGTCTGTTCACGGTTG
TTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAGAAGATGC
CAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAGAATGGTT
TGTCTAGAAATTCCGCTTCTTTTTTAACGTAAAGCTTTTTTTTCATAACC
CTGACAAAAGAATGTTAATTCATAACATGCGGAATGAGGATGTTCTCTGC
TAATTAAAATGTTTACCAGGTACCATAATCTACAAGTCTCATTCTTAATA
AGTTAAACAGCTCTGAGATATCATCGAGCACTTTTCTCACTAAAAAGAAC
AGGAATAATGATATGCAATCTAAGGTCTAatttaaaagcaaaagtcaatc
CTTAGGGTAAAACTTTCATGTGCATTATATTCCATATCTAGAGTATTCTG
CAGTTGTATTAGGTAGGATTCAACAAGGTTAGAGTCATTAGATAATccat
tttattctttttttgcagAGAAGACacaaaacatattcaatatgaTTGGT
GGAATGAGAATCTTGTCTCAAGTCCTCAAAACTGAGATGAAAAATGAATG
CGACAACAAAGCTAAGAGGAATTTGGAGTTAACCAAGACCTTATTGGATA
CAGTAACGGTCG

Coding sequence (CDS) from alignment at sc0000127:264343..267404+

>TCONS_00011348 ID=TCONS_00011348|Name=TCONS_00011348|organism=Clytia hemisphaerica|type=CDS|length=5943bp|location=Sequence derived from alignment at sc0000127:264343..267404+ (Clytia hemisphaerica)
ATGGGTTCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACA
ATGCCTTGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAG
CTGAaatggttttgcaagATGAAGGTGCtacaatattttacaaattgaaT
GGTATCAGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTC
CATTGTACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATT
ATGAGAACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAA
AACAAGATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATC
TTATTTTATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAG
CAAGGAATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTC
CATCCGAAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGA
GAAAGCATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCAC
TAAAGTCTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGT
TCACGGTTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGC
AGAAGATGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATG
AGAATGAGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATC
TTGTCTCAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGC
TAAGAGGAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTCA
TGGGTTCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACAA
TGCCTTGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGC
TGAaatggttttgcaagATGAAGGTGCtacaatattttacaaattgaaTG
GTATCAGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCC
ATTGTACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTA
TGAGAACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAAA
ACAAGATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATCT
TATTTTATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAGC
AAGGAATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCC
ATCCGAAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAG
AAAGCATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACT
AAAGTCTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTT
CACGGTTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCA
GAAGATGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGA
GAATGAGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATCT
TGTCTCAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGCT
AAGAGGAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTCAT
GGGTTCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACAAT
GCCTTGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCT
GAaatggttttgcaagATGAAGGTGCtacaatattttacaaattgaaTGG
TATCAGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCCA
TTGTACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTAT
GAGAACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAAAA
CAAGATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATCTT
ATTTTATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAGCA
AGGAATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCCA
TCCGAAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAGA
AAGCATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACTA
AAGTCTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTTC
ACGGTTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAG
AAGATGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAG
AATGAGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATCTT
GTCTCAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGCTA
AGAGGAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTCATG
GGTTCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACAATG
CCTTGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCTG
AaatggttttgcaagATGAAGGTGCtacaatattttacaaattgaaTGGT
ATCAGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCCAT
TGTACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTATG
AGAACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAAAAC
AAGATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATCTTA
TTTTATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAGCAA
GGAATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCCAT
CCGAAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAGAA
AGCATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACTAA
AGTCTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTTCA
CGGTTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAGA
AGATGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAGA
ATGAGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATCTTG
TCTCAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGCTAA
GAGGAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTCATGG
GTTCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACAATGC
CTTGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCTGA
aatggttttgcaagATGAAGGTGCtacaatattttacaaattgaaTGGTA
TCAGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCCATT
GTACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTATGA
GAACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAAAACA
AGATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATCTTAT
TTTATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAGCAAG
GAATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCCATC
CGAAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAGAAA
GCATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACTAAA
GTCTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTTCAC
GGTTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAGAA
GATGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAGAA
TGAGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATCTTGT
CTCAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGCTAAG
AGGAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTCATGGG
TTCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACAATGCC
TTGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCTGAa
atggttttgcaagATGAAGGTGCtacaatattttacaaattgaaTGGTAT
CAGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCCATTG
TACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTATGAG
AACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAAAACAA
GATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATCTTATT
TTATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAGCAAGG
AATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCCATCC
GAAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAGAAAG
CATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACTAAAG
TCTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTTCACG
GTTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAGAAG
ATGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAGAAT
GAGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATCTTGTC
TCAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGCTAAGA
GGAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTCATGGGT
TCTTCCTTGGAAAATGACATGGTGTGTCTCTTAGAGTCAATACAATGCCT
TGGAAATGACAAAAGCCAGATTATCCAAGCACTGGAGCATTTAGCTGAaa
tggttttgcaagATGAAGGTGCtacaatattttacaaattgaaTGGTATC
AGCCTCATTCATAAGTTGgcatttcaaaagaaaacaacaaGCTCCATTGT
ACAAAAGGCCTTGATACTCCTCGGAAATTCTTCACTGTCGAATTATGAGA
ACAAGAATGCTTTGTGCAATGATCAAATTATGGATTACTTGAAAAACAAG
ATCTTTGGTGATCCGCCTAACTCCAAGATGATTGCTTCAGGATCTTATTT
TATTGCGTGTCTTTGTTCTGCAAATGataAAGTACAGAACAAAGCAAGGA
ATTCAAAGCTTCTAGATAAATTAGTCTTACTTTACAGGAGTTTCCATCCG
AAAGGAGAAATACAGAACAATGTATCTAAAGAACAATGGTTTGAGAAAGC
ATCATCCAACTGTCCTGTTGTTCTCACTCATATCTCACATGCACTAAAGT
CTTTGATGAATAAACCTCGCAATGTGGAAAACCAAATAGTCTGTTCACGG
TTGTTAAACTTGGCTTTATCGACATTGGCAAGTGGCAAATATGCAGAAGA
TGCCAGGATAGAGGCTTTGCAATTTATTGCTGATTGTTTGTATGAGAATG
AGAAGACacaaaacatattcaatatgaTTGGTGGAATGAGAATCTTGTCT
CAAGTCCTCAAAACTGAGATGAAAAATGAATGCGACAACAAAGCTAAGAG
GAATTTGGAGTTAACCAAGACCTTATTGGATACAGTAACGGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006362XLOC_006362Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011348-proteinTCONS_00011348-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011348-exon-sc0000127-1491911889:264343..264545TCONS_00011348-exon-sc0000127-1491911889:264343..264545Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:264343..264545TCONS_00011348-exon-sc0000127-1510915933:264343..264545Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:264343..264545TCONS_00011348-exon-sc0000127-1575043694:264343..264545Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1491911889:265002..265133TCONS_00011348-exon-sc0000127-1491911889:265002..265133Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:265002..265133TCONS_00011348-exon-sc0000127-1510915933:265002..265133Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:265002..265133TCONS_00011348-exon-sc0000127-1575043694:265002..265133Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1491911889:265462..265593TCONS_00011348-exon-sc0000127-1491911889:265462..265593Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:265462..265593TCONS_00011348-exon-sc0000127-1510915933:265462..265593Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:265462..265593TCONS_00011348-exon-sc0000127-1575043694:265462..265593Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1491911889:265842..265902TCONS_00011348-exon-sc0000127-1491911889:265842..265902Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:265842..265902TCONS_00011348-exon-sc0000127-1510915933:265842..265902Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:265842..265902TCONS_00011348-exon-sc0000127-1575043694:265842..265902Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1491911889:266226..266362TCONS_00011348-exon-sc0000127-1491911889:266226..266362Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:266226..266362TCONS_00011348-exon-sc0000127-1510915933:266226..266362Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:266226..266362TCONS_00011348-exon-sc0000127-1575043694:266226..266362Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1491911889:266764..266889TCONS_00011348-exon-sc0000127-1491911889:266764..266889Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:266764..266889TCONS_00011348-exon-sc0000127-1510915933:266764..266889Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:266764..266889TCONS_00011348-exon-sc0000127-1575043694:266764..266889Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1491911889:267261..267404TCONS_00011348-exon-sc0000127-1491911889:267261..267404Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1510915933:267261..267404TCONS_00011348-exon-sc0000127-1510915933:267261..267404Clytia hemisphaericaexon
TCONS_00011348-exon-sc0000127-1575043694:267261..267404TCONS_00011348-exon-sc0000127-1575043694:267261..267404Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:264343..267404 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11552	2.23659	0.65852	0	2.35297	1.56783	0.802235	0.887091	0.58855	0.880272	0	0.387344	0	0	0.548611	0	0	0.357403	0.467524	0	0.519726	0	1.23267	0	37.5137	30.0619	0	0.0715116	0.257778	0.718393
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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