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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011328 ID=TCONS_00011328|Name=TCONS_00011328|organism=Clytia hemisphaerica|type=transcript|length=884bp
gGATTGGGGTGTAAATCAGGAATGGCTAAATCTTGCCCTAACAGAGAGGC
TtagaagattttttgaaaatgctgtCCTGAGCTCTGCTAGAACCACCAAA
GTAATGTAACCAGTGTTTAGAAACCTGAGTCGCTAACCACTNCCTGAGCT
CTGCTAGAACCACTAAAGTAATGTAACCAGTGTTTAGAAACCTGAGTCGC
TAACCACTAGCTACCAAAGCCGCTTGAAATTCTGTAGATTGAGTGAAATT
ATGAAGTGACTTTTTGTCCTTCCTTTGTCTGTCAACCTGTGTCAACATTG
ATCATatactttcaaaactactcTTCCAACCAAAAACACTTTTCNATTGA
TCATACTTTCAAAACTAATCTTCCAACCAAAAACACTTTTCTTCTCAAAA
TAAATCCAATTTAACTTTGTTAAGTTGTCATGGACTAGACACTAGCTTGC
TACAATCATGACCTCCTTCTCGACCTCGTTTTGAAagccaatgccttatc
cactgcgccacggattcatgccaggatagcgattctgacggctatttata
ttgtacaaactgcagaccagactgtattaagaaaaaatcacaaaagagtg
cttgtttcgagctccaaccctaaccctaactgataataacccaattccta
gccaatctgatacgtaaccacaccaaAACCACACCCAttcccaaccctac
caggtcgcctgcaggttctgacactattcccgcataccggatccgaaaaa
tagatacatgtctttcagttagtcacactaggaaatctagctttcagaaa
aaacaacatcagtcatctacaggatgcattgcacaacaaggatgagagtt
acctgaatcaagttcgcaagacaattaattaaaa Run BLAST on NCBI transcript from alignment at sc0000124:250636..251519 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011328 ID=TCONS_00011328|Name=TCONS_00011328|organism=Clytia hemisphaerica|type=transcript|length=884bp|location=Sequence derived from alignment at sc0000124:250636..251519 (Clytia hemisphaerica)
ttttaattaattgtcttgcgaacttgattcaggtaactctcatccttgtt
gtgcaatgcatcctgtagatgactgatgttgttttttctgaaagctagat
ttcctagtgtgactaactgaaagacatgtatctatttttcggatccggta
tgcgggaatagtgtcagaacctgcaggcgacctggtagggttgggaaTGG
GTGTGGTTttggtgtggttacgtatcagattggctaggaattgggttatt
atcagttagggttagggttggagctcgaaacaagcactcttttgtgattt
tttcttaatacagtctggtctgcagtttgtacaatataaatagccgtcag
aatcgctatcctggcatgaatccgtggcgcagtggataaggcattggctT
TCAAAACGAGGTCGAGAAGGAGGTCATGATTGTAGCAAGCTAGTGTCTAG
TCCATGACAACTTAACAAAGTTAAATTGGATTTATTTTGAGAAGAAAAGT
GTTTTTGGTTGGAAGATTAGTTTTGAAAGTATGATCAATNGAAAAGTGTT
TTTGGTTGGAAgagtagttttgaaagtatATGATCAATGTTGACACAGGT
TGACAGACAAAGGAAGGACAAAAAGTCACTTCATAATTTCACTCAATCTA
CAGAATTTCAAGCGGCTTTGGTAGCTAGTGGTTAGCGACTCAGGTTTCTA
AACACTGGTTACATTACTTTAGTGGTTCTAGCAGAGCTCAGGNAGTGGTT
AGCGACTCAGGTTTCTAAACACTGGTTACATTACTTTGGTGGTTCTAGCA
GAGCTCAGGacagcattttcaaaaaatcttctaAGCCTCTCTGTTAGGGC
AAGATTTAGCCATTCCTGATTTACACCCCAATCc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011328-exon-sc0000124-1491911889:250636..251519 | TCONS_00011328-exon-sc0000124-1491911889:250636..251519 | Clytia hemisphaerica | exon |
| TCONS_00011328-exon-sc0000124-1510915933:250636..251519 | TCONS_00011328-exon-sc0000124-1510915933:250636..251519 | Clytia hemisphaerica | exon |
| TCONS_00011328-exon-sc0000124-1575043694:250636..251519 | TCONS_00011328-exon-sc0000124-1575043694:250636..251519 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124 | supercontig | sc0000124:250636..251519 . |
Blast
The following BLAST results are available for this feature:
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