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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011248 ID=TCONS_00011248|Name=TCONS_00011248|organism=Clytia hemisphaerica|type=transcript|length=884bp
GTGTGACACATACAGATTTTTCTGGATgctgatttttggtatattacttc
aaaatgatgtatagattgataaatagccaaagactggttttttaattaac
ttccccccacttttttttgctctagaagtgaaaaatgcaaaaaaagtgac
attaccgcaaaacgtgaaaaaaaactgtgNCACAACTTCTTCCGCTCCAC
CACCAGCAACACGGTCGATCGATCCCCGAAATTCTTGGCTCATAACGATG
TCCTGATTACAGCTTATATGGATCAAAATGATGGCAAGAACCACATAACA
GCcacatggaattattatgaTGACATTTAGCATTCCTTATGGGCGAAAGA
GACCAGATTTGATAGCAATGAATTTGCCTCAAAAGGCTTAcggtttttgg
aaactttgcaaCTGCCGCCGACTATGCCATCTAGTTTCACGGTAGCCGAT
ACCCTTCAAAAGCTTCAGGAGCTAAGAATACTGACTGAAAGTGTTGTTTA
GATAGTTGGGGNTTGAGTTATGATcaaataactgaacatgtctattttct
gaaaaaatgttgcgcgctgacagcgtgaaaatttaaaaagttgcgcgctg
gaaaggttaagcaAGGGGTTAATTATTTTAAAtcataatttaataaaatt
ctaGTTTAACTCAAAAATTATAACATTGTAATAAAACAAAAGCCAAAAAA
TATAACTTACTTCTAAAGCTaacaatatataaaaaaacaaagaaaatatt
aaagtaGTATGTGCTATCCTCTAATATGATGTTCTGCTATGTTTAAAACA
GACACTATTTAATTCCtgatttttagaaaaacagctttcGCTCACGATAT
CAGCTTCTCAATTGTAACAGGGAAATGTATTGGT Run BLAST on NCBI transcript from alignment at sc0000122:393073..393956 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011248 ID=TCONS_00011248|Name=TCONS_00011248|organism=Clytia hemisphaerica|type=transcript|length=884bp|location=Sequence derived from alignment at sc0000122:393073..393956 (Clytia hemisphaerica)
ACCAATACATTTCCCTGTTACAATTGAGAAGCTGATATCGTGAGCgaaag
ctgtttttctaaaaatcaGGAATTAAATAGTGTCTGTTTTAAACATAGCA
GAACATCATATTAGAGGATAGCACATACtactttaatattttctttgttt
ttttatatattgttAGCTTTAGAAGTAAGTTATATTTTTTGGCTTTTGTT
TTATTACAATGTTATAATTTTTGAGTTAAACtagaattttattaaattat
gaTTTAAAATAATTAACCCCTtgcttaacctttccagcgcgcaacttttt
aaattttcacgctgtcagcgcgcaacattttttcagaaaatagacatgtt
cagttatttgATCATAACTCAANCCCCAACTATCTAAACAACACTTTCAG
TCAGTATTCTTAGCTCCTGAAGCTTTTGAAGGGTATCGGCTACCGTGAAA
CTAGATGGCATAGTCGGCGGCAGttgcaaagtttccaaaaaccgTAAGCC
TTTTGAGGCAAATTCATTGCTATCAAATCTGGTCTCTTTCGCCCATAAGG
AATGCTAAATGTCAtcataataattccatgtgGCTGTTATGTGGTTCTTG
CCATCATTTTGATCCATATAAGCTGTAATCAGGACATCGTTATGAGCCAA
GAATTTCGGGGATCGATCGACCGTGTTGCTGGTGGTGGAGCGGAAGAAGT
TGTGNcacagttttttttcacgttttgcggtaatgtcactttttttgcat
ttttcacttctagagcaaaaaaaagtggggggaagttaattaaaaaacca
gtctttggctatttatcaatctatacatcattttgaagtaatataccaaa
aatcagcATCCAGAAAAATCTGTATGTGTCACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011248-exon-sc0000122-1491911889:393073..393956 | TCONS_00011248-exon-sc0000122-1491911889:393073..393956 | Clytia hemisphaerica | exon |
| TCONS_00011248-exon-sc0000122-1510915933:393073..393956 | TCONS_00011248-exon-sc0000122-1510915933:393073..393956 | Clytia hemisphaerica | exon |
| TCONS_00011248-exon-sc0000122-1575043694:393073..393956 | TCONS_00011248-exon-sc0000122-1575043694:393073..393956 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:393073..393956 . |
Blast
The following BLAST results are available for this feature:
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