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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011237 ID=TCONS_00011237|Name=TCONS_00011237|organism=Clytia hemisphaerica|type=transcript|length=844bp
CAGGAAACTTCGAAAGGAAACGAGTCGCTGAAAAAAACTGGTTAAAATTC
AAAtatgttcaaaaataaagaaagcaCAAACTGAAAACCAAGGGAATAAC
ATAACATATAATGATATACATCTAAACTAAATCTAAATAAATATTactca
aaaagtaaaaagttttggTCCTCAATGTTTCGGTCATTACAAAGTTAGGT
CCCTATACGAGCCCCCCAAGcagttttcgtgatggcgtgatgagGACTTT
TTTCTAGCgagattacACTTACCGCTGGGGGCTCCTATACACATGTCAAT
CTATGGTAGACGCACAAGATATAATTTTCACGGATAAAACCATTTGCATG
TGGTCAAAAACTGCTATCTACTCACAACTCACGTCAAAttgaaatttcat
aaatttctagaAATAATTGTCACAAAAAATTATNTTTGTGTTCCAAAAGA
GTGAGCCTAtaattttatatcttttttaatTCGTCTTCTTTtgtatattt
atcattttaaaaCCCGTACAACTAAGACTGATTGATAATTCTGACTTTCT
TCTATCATAAAAACCATCCATGACATTTCCAAATATCCCAGCATTCCCTG
CATGGATAGACAACATGTGGGGCCAAATGACTTGACAGACTCTCGCTTCC
TTTGAATATGGCGCTCGTCGTTTTAAAAACTTCCAAAACTGCTCTTCCTC
TCGATTGATTTTAGAATAGATGTTCAAGAAATTCATTCCATGAGTGCTCA
TCAAGGAGAGGGAGAGCCCCGGGTGATACGTCAATGAGTCCAAGTAAAAT
CATCACGAAAAAGATCATCATGAAAAGCAGTATGGTTGTAATGA Run BLAST on NCBI transcript from alignment at sc0000122:472040..473056- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011237 ID=TCONS_00011237|Name=TCONS_00011237|organism=Clytia hemisphaerica|type=transcript|length=1017bp|location=Sequence derived from alignment at sc0000122:472040..473056- (Clytia hemisphaerica)
CAGGAAACTTCGAAAGGAAACGAGTCGCTGAAAAAAACTGGTTAAAATTC
AAATATGTTCAAAAATAAAGAAAGCACAAACTGAAAACCAAGGGAATAAC
ATAACATATAATGATATACATCTAAACTAAATCTAAATAAATATTACTCA
AAAAGTAAAAAGTTTTGGTCCTCAATGTTTCGGTCATTACAAAGTTAGGT
CCCTATACGAGCCCCCCAAGCAGTTTTCGTGATGGCGTGATGAGGACTTT
TTTCTAGCGAGATTACGTGATTTGGATTTTTTTTTTTCGTGATTGCGTGA
TCAGAGGTCAAAACGTTGATCGTGATTTGAAAAAATTTGAGCCATAATGC
GTGATTTAGACTTTTTCAAAGGGATGCATGATTATCCAATTTTTTTGCTG
TTTATTGAAGACAAAGAAAATGCGTGATATCGTGATTAGACTTACCGCTG
GGGGCTCCTATACACATGTCAATCTATGGTAGACGCACAAGATATAATTT
TCACGGATAAAACCATTTGCATGTGGTCAAAAACTGCTATCTACTCACAA
CTCACGTCAAATTGAAATTTCATAAATTTCTAGAAATAATTGTCACAAAA
AATTATNTTTGTGTTCCAAAAGAGTGAGCCTATAATTTTATATCTTTTTT
AATTCGTCTTCTTTTGTATATTTATCATTTTAAAACCCGTACAACTAAGA
CTGATTGATAATTCTGACTTTCTTCTATCATAAAAACCATCCATGACATT
TCCAAATATCCCAGCATTCCCTGCATGGATAGACAACATGTGGGGCCAAA
TGACTTGACAGACTCTCGCTTCCTTTGAATATGGCGCTCGTCGTTTTAAA
AACTTCCAAAACTGCTCTTCCTCTCGATTGATTTTAGAATAGATGTTCAA
GAAATTCATTCCATGAGTGCTCATCAAGGAGAGGGAGAGCCCCGGGTGAT
ACGTCAATGAGTCCAAGTAAAATCATCACGAAAAAGATCATCATGAAAAG
CAGTATGGTTGTAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011237-exon-sc0000122-1575043694:472791..473056 | TCONS_00011237-exon-sc0000122-1575043694:472791..473056 | Clytia hemisphaerica | exon |
| TCONS_00011237-exon-sc0000122-1575043694:472040..472617 | TCONS_00011237-exon-sc0000122-1575043694:472040..472617 | Clytia hemisphaerica | exon |
| TCONS_00011237-exon-sc0000122-1510915933:472791..473056 | TCONS_00011237-exon-sc0000122-1510915933:472791..473056 | Clytia hemisphaerica | exon |
| TCONS_00011237-exon-sc0000122-1510915933:472040..472617 | TCONS_00011237-exon-sc0000122-1510915933:472040..472617 | Clytia hemisphaerica | exon |
| TCONS_00011237-exon-sc0000122-1491911889:472791..473056 | TCONS_00011237-exon-sc0000122-1491911889:472791..473056 | Clytia hemisphaerica | exon |
| TCONS_00011237-exon-sc0000122-1491911889:472040..472617 | TCONS_00011237-exon-sc0000122-1491911889:472040..472617 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:472040..473056 - |
Blast
The following BLAST results are available for this feature:
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