TCONS_00011230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011230
Unique NameTCONS_00011230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2264

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011230 ID=TCONS_00011230|Name=TCONS_00011230|organism=Clytia hemisphaerica|type=transcript|length=2264bp
gcagaAATTCATTAatcataaaaatataaacatacaTGATACCATGATGG
AGCTGTTAACAGAGTAGCAAGTACTAGTACCAAAATCTATGGCAAAAGAG
GTGACAGTTGTCAAAATCATCAGCCATGTATTTCAATCGAAGACTGATGA
GAAGACAAAGGAAGCTGGTTTTATGCTCAGCTTTGCTGCTCATATTCATT
ATGGTCTACATCATCATCTTTGTGGAGGACCATAACATCAAAGAAGACCA
TTTCCATCCGTTTTCTGAAAGATGTATTTCCAACACAGCACAGAATATGA
TCACTGAGCTGTGTCTAAACTATACAATGGGAATTGCTTATGGATCCCTT
TGTCCTTCAATATGTATCGAGAGATCGGTGAGGATTAACTCTTGTATTCA
CCATGGGACTACGTATGTACTTGTCGGTGAACACAATGGTGAAAATATCG
tattaaagaaaaagaagccACATCGCCTTGAAATGAGTGTACAAATTTTT
GAAGAATCGATTAAGCGAACAAGCACGATGGAGGAAGTACACCAAGCTTA
CATTGATCGTTTTTCGGACGATGTACGATCCATTTTCGGACAAGACagtc
aaaaactttttcttaaGAACTTCAAGAAAATCTCTCGACTTTTATTTGGT
TTACAAGTGGAACGGTTAACTCTGGATCAGCTCAGAAATTCATGGTACCT
AATAGGTCAGGATGAATTAGTCGTGATGGCAATACACCAAGATATGGATA
GTTTCCCAAAGCTACTGGGCACATGCGGTCCTGTATACGGCATGGAAAGA
ATACAACCTTATTCAGACTTTTTCCCGCAGCTGACTCCATCGATGCCTTG
GAAAAAACGTGTCAGAATTGCCAAGAATTTCCTACACCTCATCATGGAGT
TTGAACGTTCAGGAGTAGGCCGGTTACACCATTGTGATGTGCAAGAAGCG
AATTTTGGATTAACCAGAGATTTGAATGTCAAGGCTATTGATGTGGATTT
GATNGAATTTTGGATTAACCAGAGATTTGAATGTCAAGGCTATTGATGTG
GATTTGATATACTCGCCAGATCGGATTGAGGAGATTCTAGTTCAACCAGA
CTGCAATAGTGATTCAGATTGTGATTTCTTCAAATGTAATGGACAGTGCG
ACGTTGAAAAAGGGAAATGTACTGCCAAACAACTGACCAATAATTTGATG
ACGATATGCCGTGAGATCTTTTTACCGAGGTGGCCCAACAATGGATTGTT
AACACATTTCCAACCTACTCATATCAAGAAACAGTTGACCACATTATTAG
AAGATTGTAGCTCACGAACTTTCGGTACTTTATCTATGGACCATCACACC
GTCAAAAGAGTTTTGTATGATCTTGAAAAACTCCTGGATTTGTCCCTGGA
GACACTTAGGTAGTTGTAATAAATGGATTTTAGTTCATCCACCCTTCTTT
TAAGGTATAAAGTAGAATTTTCTTCGAGGGATGTTGAATTTGGAGTTTGT
GtcatcttttcaaatttttccaatccGTACACTTTCAAGGCATTCTTTTG
ACCCAAAAATCGTCTTCCACCCCTGTATCTAGGTGATAATTAGAGCTAAT
CTGATGTGATTAATTGCAATTGCAATTTGAACAAACAAATCTTGCCTGGA
CGACTTTGTGGCTTCTCGATTTTTGGTTAAAGAGAAGGCGTGTATTACTG
TTAGCTATCTAATAGCTGGCGttagaaaaatttccaaaagcTAATAAACA
GGGATGTGGTCCTATGGCATGCTCCCCCGCCCAAAAAGTAAAGTAAATTC
AAGCTAAAATTAGACTATTTGGGAGCAAAATAAGGCACGGTAATTAACAG
ACGCTAATAATAAGGCCCGGGCGAGAGgttgtttaaaaatttaaaattaa
caGACAGGCCATTTATTATATTATTACAGCCTAGggtttagtttttttta
cttgttcaaaaagttaaaatagtATTATTCGGTTTTAGATTTCTTTAAAC
GCATTGTTAATAGTAATATGAGAGGTTTTGATATATTTGGTATTTTGTAT
ATGATAGTATTTGAATTGTATGTAATAACTTTAGGtagatatttttttaa
tatttcgaaTCAATTTATCGGTGTTTTCTATGAaaaactgcacataaaaa
tCACACAAAACTATTTTGTTTTCATGCATCAGCTGGACCCCTGTGATTTA
TAAATAATACATTTTCACTGGAGTTATTTGTTCCGAAAGTACAAATCTAC
AATTTTAATCGTGC
Run BLAST on NCBI

protein sequence of TCONS_00011230-protein

>TCONS_00011230-protein ID=TCONS_00011230-protein|Name=TCONS_00011230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
MYFNRRLMRRQRKLVLCSALLLIFIMVYIIIFVEDHNIKEDHFHPFSERC
ISNTAQNMITELCLNYTMGIAYGSLCPSICIERSVRINSCIHHGTTYVLV
GEHNGENIVLKKKKPHRLEMSVQIFEESIKRTSTMEEVHQAYIDRFSDDV
RSIFGQDSQKLFLKNFKKISRLLFGLQVERLTLDQLRNSWYLIGQDELVV
MAIHQDMDSFPKLLGTCGPVYGMERIQPYSDFFPQLTPSMPWKKRVRIAK
NFLHLIMEFERSGVGRLHHCDVQEANFGLTRDLNVKAIDVDLXEFWINQR
FECQGY
Run BLAST on NCBI

transcript from alignment at sc0000122:169413..180199-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011230 ID=TCONS_00011230|Name=TCONS_00011230|organism=Clytia hemisphaerica|type=transcript|length=10787bp|location=Sequence derived from alignment at sc0000122:169413..180199- (Clytia hemisphaerica)
GCAGAAATTCATTAATCATAAAAATATAAACATACATGATACCATGATGG AGCTGTTAACAGAGTAGCAAGTACTAGTACCAAAATCTATGGCAAAAGAG GTGACAGTTGTCAAAATCATCAGCCATGTATTTCAATCGAAGACTGATGA GAAGACAAAGGAAGCTGGTTTTATGCTCAGCTTTGCTGCTCATATTCATT ATGGTCTACATCATCATCTTTGTGGAGGACCATAACATCAAAGAAGACCA TTTCCATCCGTTTTCTGAAAGATGTATTTCCAACACAGCACAGAATATGA TCACTGAGCTGGTGAGCGTTTTCCGCAATTTGATTTTGTCTACAGGTGTT CTTCTATGAGAACATTAGATGTTATGAGAACATTAAGATGTTCTTAACTT TTGAGTTTTTTTTAAGCATAAAACTGCATGAAAATTTCATTATTTTCACC GTTTTGTGAGTATTTTTGTCCACTTTCCTATGTAAGGAGTCGGATGTCGA ATCCTTATATTCTTATAAAGTTTGTTCTCATAAAAAAACATGTTTATCGC TAAAAATAAACGTTCCTCGGATCTCTTGAGTATTTTGATCTAAATAGCCT GATTTTACTTTATATTTAGTTTTTTTTTGTATCCCAAGGAACAATTCTTA ACCACTCGTTTGTTTACTTATTGCTCAACATTCTAATTTCTTGGAAAACT TATCTTATGGGGAGTAATTTTGGTATGACCCAAGGTTGAGAGAATGCATT TGCAAGAATAAATTTTGATTATTTGACAATCTGTCTATATCAGACTAAAC TAAGCAAAACTAAGTATCTTTATAATCAGATTGGTTGAGACCTTTGCTCT GTAGATCTTTTCCATGGTCCTGAGAAAAATCTCCTTTTGTTATCTTATTA TTTTCCAAAGTTGAAAAGGACAATGGGTTCTTACACGGCTGTAACGTAGA AATCCTATTGTTGTCTGCCTTAAGCCAAAAACTTTTAAATTAAATATCTT AATTAAACTTGGGAAAAAATTTGCAGGTTTTTTTTTCAGGACCATAGAAG GAATTTTCTGGACCAAAAATCTGAAACCATTTTGATTTTCTCCCTTTAAA AATTGAATTGCTTCTTTTCTTATTCTCATATATACAGTGTCTAAACTATA CAATGGGAATTGCTTATGGATCCCTTTGTCCTTCAATATGTATCGAGAGA TCGGTGAGGATTAACTCTTGTATTCACCATGGGACTACGTATGTACTTGT CGGTGAACACAATGGTGAAAATATCGTATTAAAGAAAAAGAAGCCACATC GCCTTGAAATGAGTGTACAAATTTTTGAAGGTAGGTTTCAGAGTGTGTTA CAATTTTCCGGTCTCTTAGTCTGTATGACCAGTGGCCTGTGTCTATGACC TGTGACCTGTGTTTATGACCTGTGTCTATGACCTGTGACCTGTGTTTCGA ACTATACGGTAGGTTAGGTATAATACCCTACCGTATTCTTAGATTCGATG GACGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTATT AACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACTCGTCATTTT TATTACTTCAAATGACCAATTATTAAAGTATCTTATAAAAACTCCATTTC ATATGTTTTTGATTTGTCAATAGAGTCACAGGATCTTCTTTTAAGTGAAT TTTTAAGCTTTTTGAAAAGTACCAAGACCTAAGTGATCTAAAAATCACGA GCTTACTTTCTGAATCCAGCTGCTCCTTCCCAAGTTCGATTCATTAAAAA AAACTGAAGAAGGACCGTTCTAAATACTCTAGAGATTACTTGTTATCAAT AGGGTCAGTGAGAATGCATAATATACAAGAATCCTTTTAAAACCCTAGAA AGAATCTTCAATTTTAAACCATCCCGTCCTGAATTTCTTCACATGAAATG ATTTAAGAGTTTTTATAATCGTTATCTATTTCAGAATCGATTAAGCGAAC AAGCACGATGGAGGAAGTACACCAAGCTTACATTGATCGTTTTTCGGACG ATGTACGATCCATTTTCGGACAAGACAGTCAAAAACTTTTTCTTAAGAAC TTCAAGAAAATCTCTCGACTTTTATTTGGTTTACAAGTGGAACGGTTAAC TCTGGATCAGCTCAGAAATTCATGGTACCTAATAGGTCAGGATGAATTAG TCGTGATGGCAATACACCAAGATATGGATAGTTTCCCAAAGCTACTGGGC ACATGCGGTCCTGTATACGGCATGGAAAGAATACAACCTTATTCAGACTT TTTCCCGCAGCTGACTCCATCGATGCCTTGGAAAAAACGTGTCAGAATTG CCAAGAATTTCCTACACCTCATCATGGAGTTTGAACGTTCAGGAGTAGGC CGGTTACACCATTGTGATGTGCAAGAAGCGAATTTTGGATTAACCAGAGA TTTGAATGTCAAGGCTATTGATGTGGATTTGATNGAATTTTGGATTAACC AGAGATTTGAATGTCAAGGCTATTGATGTGGATTTGATATACTCGCCAGA TCGGATTGAGGAGATTCTAGTTCAACCAGACTGCAATAGTGATTCAGATT GTGATTTCTTCAAATGTAATGGACAGTGCGACGTTGAAAAAGGGAAATGT ACTGCCAAACAACTGACCAATAATTTGATGGTAAGTTCACACTTCTTCTT TTTTTATTTCAGTTGTACGTACACTCTATCATCGTGGGCCCCGTCAACTT TTTTGCAGACCATGCCATATTGAAACTTATGTACATTAGAACAACTTTTA ACAGACCAAATGAAACCATAAAAACTATTATTTTCCCCAATTAGATAACC TTTTAAGATGTTTTGAGGGTGTAAAAAGTGAAAAATCTTTTTCCTCGCCA AAACATGGTGGGCGACATTTTTTTCAAAAATATTGGCCACTCTACCACTC AAAATGGCTCGCCGGGGCCCATGATCATTGCTATTTCAAGGGCCTGAACT GCGAGCTGCCAAGTTTCTTTCTTGAAATTAAATATGATTCCGAAAAGAAC AATTTGTTGTAGAAGATATCAGAATTTTTACCTGAAGCCCTCCGAATGCA TTCAGAATGGGTCCTACCCATGAAGGAGTAGGAATCACGGTGCTGATAGA CACTGCGACTTGACAGACGCGAGCTGCCAAGCCATGGCGTGTACCATTTG AACGACACTAGGAGAGCGATGCTCACGCGAGACCGAACCTTATGAGTGCT ACGGCACGTCATAATGTCTGTCTATCCTACCCACACTCTTGTATCAGAGT AATGGTACCCTATTCCCCTCACATGGCATAAGTTGCCAAGTGAATCGTAG AGACACGGTGGGTATCGAACTCGGGTCTCCCGACGGGAATCAACGATGAT AACCACTATACCACTAAACCTTATCAGAGTGATTAGAAATACAAAAATTG AGAATTCAAACATCTAACTTCAGTCTTTATTCGTAGTCTGCAATTCTATT AAGATCATTGTTCTATTATATACAAGTTCCTTAGTTGAGTGAAATGTTCA GTATACAAACTTGTCAGAAATAGTCTCGATTTCCAGAACATCATTCTTCT ATATACTTTTTTTAAAAGATTTGTTTGCACAAATATCGTAAATGCGTGAA TTTCGAAGAAAAAAAATGCACGTATGTATCTCAGCGCGAGGTGCTCATTC ATGCGCCTTCCGTCCGGGGATTTATTTAAAGTGAAAAACATATTTTATCT GCCTTGGTAGAACTTTTCAATGAAGAAGTTCATATAAATGGTTTTTCTAA AATCTTTAGATTTGTCAGGTTGTTCATTTTGACCCATAACCTTCATTTTC CATTTTATTCATCGCCTACGATCCCACGTTTTACAATTTCATTCTTCCAT TTTATAATGTACTTTTTAAAGGTTTCTATTGCGAACCAGAGATATTTATA GGCCAATTCTAATCCAACTCTATGGACATTGTAATGCTTTTTTAATAAAG ACTCTAAAGCATGCATTCTCTAAGAAAATCTATACAACATGGCACTGAAA ATTCTCTCTTTCATCATGTTGGTATTTTTGCAGTGAACTAACTTGTGATC TAAATTTTTACTTAATCCCACGTTTTCCAGATTTTTGGACCTACCTCGGA GGTGCTTTAGTTTAAATTAACCGATGTTCATCCGTTGGTTGGTTCGTCCG TTCGTTCGTTCGTCCGATTATTGGCTCTTTAGTTTTTGCTGATTTTTTGC ACACTGATGCAGAATGGTGATGCCCAAAAAGTGACGGAGCCCGATTTTGG AAAAAAAAAAGAATTTCAATCGAAAATACCGGAAATATGCTTGATAAACT GGGTTTTTGGCATTTTCTCGAGATTTCATCATTAGTTTTATTAATTGCGT ATTAGCAATGTCCAAAATGTGGCTGAGTCGGATTTTCGAGTAAAATTTTT TCCGGCCGGAAATACCGGAAATATGCCGGAAATCGCGGTTTTTGCAGATT TTCATTGGACTTTTTCCTAATATTTCTTTATTTTTTTCACACAAAAATCT AATAGATAGCAATGCCCACCATCAAGCATGATTCAATCGTCAATAAAACG GATTTTTTGCAANAAATATGCCGGAAATCGCGGTTTTTTCAGATTTTCAT TGGACTTTTTCCTAATATTTCCCCGGAACTTTCTATTTCTTTTTTCCCTA CTCTCCTTCCTTCTCCCCCATCAACAATCAATGATGAAATTTGATTCGTT ATGCATTTTCGCTAAATGCAATATTTTCTTTGTTTTATTTTTCTCCTTCT TGCTATCTAACTTTCATCGTTAGGTAGGTCCATTCAGCATCTAGCTTGTT TATATTGCTCTATTTTTAACTCGAATCCATTTTGATGTTATTCAATCGCC TTTATCCCATTGTCTCTAAATAATTATTTGAAGTTTTACTTTGGCACGAA GCGGCAGATGTTTTTGAGACAACACACCAAACCCACGTGTCTTCTAACCT TGGATAAATATACAATTTAATGGTTTTCATCATCAGTTTCATTTGTATAA TTTGTTCTTTAAACATCAGTGGTATCTGTAGGCTGCTGGCATCCACTAAC GGATTGGTGCTCCTTATACTACCTTCGGTTCTGTAGAGATCATATGATAG ATAGATAGATAGATAGAATCGATATTTTACGTGGATAGCCCAGTAATCTA GGACTTTTAGACAGTCTTTCAATTGTTTTCACGGGGTCCACGGTCAGCTG GCTCGGCTATCTATGAACTGAACAGAACATTGGAAGGAGCGGGGATTTGA ACCGCGAACCCCTTAGTTTAAGACGCTGACGCCTTTGACCACCATCGCTC CTTAGATATATGTTGGTTATCTATTACTTTTGTCTTTGTTTACATTTTTT GGTGGCAATTCGAACTTTTCAAGAAAAATGGAATGTATGAGGTTCTTATT CAATGATGGTACCAATCGAACTAGAAAGTTGATTCAGGTTCTTGAAATTG ATAACAGTCACCGCGGAATGGACAAACCTTATCCCTCATTATTATGTGTA TTCGCCTCGTGCATCACAGCCGTCAATTTTCTTCTTGTTATCGGGTTGAG GAAAACAAACACCAAATTAACCCTATCGCAGAAATTATACACTTATCTTT CGATCACTGACTGTTTAGTGGGCGTTGTTTGTCTGCCTTACATTTTGACA ATTGATTTTGTATCCACGTTTCATAATTGCACCACGAGGAGTCTGGGGCT AGCTTTAGGGACTTACGTAAGCAGTATTGGAATGGGATCGTTTTTACTTA TTTCTGTCATTCGTTATATAGCCATATTGAAACCGTTCCTAAGAATCGAC ATCAAGTGGATTAAACTGTATATTATTTTCTGGAACATTTTTGTGCTTTT CTTAGCCTTTTTTACGTTTTTCACTTACTCTGACTTGCATTCATTTTTCC ACTTATACTTTGTTTATTGGCTGGTCATGGCTCTCTGCATTATCCTGAAT GTGGTTGTGATTCTACTGATAAACCGACATTCTTACCAGGCTTTGATCAA CAATAATCAACATCCGACCAATGCTGCAATCTCGCGAAACGCTGCTAATG CAACCCTAGAAGTACGAAGGAAACGTAACCTAGTGGCTGTTCGAACTTTA CGAATGATCTCGATAACGTATGCTGTTTGTTACTTACCAAACAGCCTCTA TTATTTGTTGCTTGGCACCATGATATCGAATTACAAGGGAAACGAGATTT TGCTGTCACGAATTTACGACACGTTTGCCGTTTTTCATTTACCATTGTTT TTGTGCTCTGGTATCAATGCATTGATATATATTGTGAAAGATAAACGCAT TGTGAACTACTATAAACGCAAATTGTGTTACATGCGTGACCAAATTGAAA ATCATAACAGCGTTCTTGAAACTCAGTTTTGATGTGAATACGCTACACTC TTTTGCTTTTATATTAAAAATGAGACTCAAAAAATGTCAAAAAACGAGAA TGAGTTATGAACAAACATTTACAGTATTACTATCACTCTGACGATGCTTT TGTTGTGAAGCGAAATATTAGTTTTTCAAATAGAAAATAAAGATTTTGTT GTTTGTGATCTGACTCCACATAGATCCGGATGGCAAAATCAATTTTCGAA TTAAGTTTTATCTTGTTTTTACTGAAGCTGTCATATGGTCAAAGTTTTTA GTTATGAACAATTTAGAAGAATAAGATGCTTCAATTTTCCCTTAAAGAGT AAGAACAGGATAAGAACAATTTCAGGCTCAAAGTGGCAAAACAGTAATAT ATAAGGGGAGTCGAGCCAAAGTTACTGATTCAATTTTTGTTGTTGAATTT TTTAAGTCCTTGGATCCCTTGAGTTACAAATTCTTCTTCTTGACAAATCA GACTCGTTTGATTATGTTTGTTACTGCTGACGATAACATTTATAATCAAA TCATATCAAATCAAATCAGTTAGTACTCTCGGGTACCTAATAGCCGGGGG GCCCCGCTAATTAATTTTTCGAAAATTTTCCACCCAGGATATTCTTATTC CAACCCATTTTGCCATTATTTAAAGAAAATATATATTTTTTAAATTAAAG CGACAAACTGTTAGTGAGAACAAACTAACTTTTTTAAATGATCAATTAGG TCCATAAGATCACAAAAACGAGTGTGAGAAAAATTTGACAATTTTGCTGG TCCCCATGTGACGTCATCACTTTTGCTGGGGCTTGAAAGTGAAAGTGGAA ATTAGAAGCTCAAATATGGCTCAAATGAAAGATATTTATCCAAGGATTCC AAAAAGTATCACAACGTATACCTAAAAATCAATATTTGAGAAGTTATGGG ACAAGCTGGAGTTTTTACAAGCTCACATTTGATTTGGTTGGTCGTTAAGA TGTAATAAAAGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATC ACTTTAAATGACCAATTAGTGAAGTATCTTGTAAAAACTCCAGCTCATCC CGAAGTTATAAAGGAAAATAGCTTAAAAAATGACGTCATCTATGACGTCA TCGACAATCAAAAAATCTTCAAAATCGAAAAAATTTTGTTTCGTTTGAAA GAGGACCATCTAGTGAACAATAGTGTTTTGCCACAACAAAGCTTTGCTGC AAATCTTGCAATAAACAATATCGCTCTTGATGAAGCCAAAATCTTAGCTC TCATTCGCGCACTTACATCTAACAAAGCGCATGGTTGGGATGACATCTCC ATACAGATATTAAGATATTTTTGGTACCTTCCTCCCGGCGGTATAATGTA GGGTTTTCAGCGGGAGGGTAGGAACCTTGAGTGTTGTATATTTGTTTAAA ACCTATTATATTACAGTGGAGTCTTTTTAGCTCGAATCACTAAATCTCGA ACAGGCCCGGTGAAAGCAGGAAGACTGATGAGACTTCAGCCTCCCCACTT TTGAGCGAATGAGATTTTTTTTCTCAAATTTCTAGCACATATTATCTCAT TTTGAAACTTCAGCCTCCCCACTTTAACGCTTGTTCCGCTGGGCCTGTCG AAGGTCTCTTTAACTCGAACAAGTTTCAAGGTTACTTTAGTTAACAATGC CTTACAAATCTTGTGTTTCATAACGGGGAATTTTCTTATCTCGAACAGAT TTGCTTTCCATGTGCGTTTTCGAGTTATTGACACTCTACAGACTCAAGTT AATTTTATTAGCGAGAATTTCTTTTGGCGAGGCAATTATTCAAATTTTTG CGAACTTCCTACAAATCAAATTCTCACAAAAATGTTTCTTCCTTCTTTCT TCTTTCTTCCAGATTAGCACAGTATAAAAAGTGAGGTCTGAATATCTGAT TGATCTTTTTGACAAAAGAATGTCTTTAGACCATTAATAACAGTTCGGCA GATTGCATAGATCTGCAACGTTGTAGACTGGAGTCGTTTATGATGCGTGT AATACTAATAATACCAATACTAATAATAATAATACGGGATTTAGTTTGTA TAAACGACTGGAAGAATCCGGTGTTCCAGCCTTGTAGATACCCCGGCTAG CCACGCAGAAACTTGCGTAGCGAGAAAGCAATTTATTATCAAGCAATAAC AAACTCTCAAAACAAAATCAACTCAAATGAAAAACTTTCAATACACAAAT CCACACACATTTTTTTTTTCAAGATTTTTTTTGAGCGGGAAAAAATTATA ATTGCAATATTGACACTTTTCTTTTGTTTGGAGTTAGTGCACAAAGCTTT CTAGACGACTAAAATTGCTCCATTCATTACTTTTTGCTTTATTTCTACTA TGTATAAATTAGTCGTCTAGCTTGCTAGACTAGCAGCAACGTTGCAATAT TCCGCAACGTTGCGGTTTTTCACAGCGTTTCCCCAGGGTTGCGCTGCTAT TTTATGCAATGCTTCCAATTGAAGCTTGTGATTTAAAAAAATATGAGCGC CTACCAATTTTCTTCTAAACACATACAAAATCAGGCAAAAACTTGCTTTC TTGAACAAAGTAGCGCTTTTTTGAACGGAGTGGCATTTCTTCCAAGAATG ATTGTGAATAATCGCTAGGTAGGAAATTAAAATGCTAGGGTGAAAAGTTT CCTTTTGGGTTGTTCTTCAAAATGCACATTATTTTGGGACCCCGGTCCAG GCCCTGCGATGCCGATTTTGGTCCAAAGGCTAGAGCTGCGAAATTATGCA GCAGTAAAGCTGCGGAATTTCGCAACGTTGCGGAATATCACAACGCTAAA GATGCAGAATTTCGCAGCGTTGCGGATCTGTGCAATTTGCCGAACTGATA AGAATGGAAACGAATGCTCTAAATTTCTACACCCCCTTCTCACAGACCCA TTGGGACCCCTTCCCACTAGAAAAATATCGTCTCCGGTGGAAAGTCTTAC TCTAATTTTCGTCCTCACTGAAAATAATCAGATAAAACCATTCCTCGCTG CAAATTGTTGTGTTATTTTTCCATCCCCAGTGAATTTTCTTGCTCAAAAA CAGTGGACTTCGAATCCCCAGTCATGAGCAAAATGAGAATACCAATCCCC ATCGAGCTTTGGTCCGCTATTTTTATAAAAATCTTTAGTATGGCTTTTGC AAGGCCTGCTTCATATTTGTATAGATTGTATTTTCTTTCTCTCATTCACA GACGATATGCCGTGAGATCTTTTTACCGAGGTGGCCCAACAATGGATTGT TAACACATTTCCAACCTACTCATATCAAGAAACAGTTGACCACATTATTA GAAGATTGTAGCTCACGAACTTTCGGTACTTTATCTATGGACCATCACAC CGTCAAAAGAGTTTTGTATGATCTTGAAAAACTCCTGGATTTGTCCCTGG AGACACTTAGGTAGTTGTAATAAATGGATTTTAGTTCATCCACCCTTCTT TTAAGGTATAAAGTAGAATTTTCTTCGAGGGATGTTGAATTTGGAGTTTG TGTCATCTTTTCAAATTTTTCCAATCCGTACACTTTCAAGGCATTCTTTT GACCCAAAAATCGTCTTCCACCCCTGTATCTAGGTGATAATTAGAGCTAA TCTGATGTGATTAATTGCAATTGCAATTTGAACAAACAAATCTTGCCTGG ACGACTTTGTGGCTTCTCGATTTTTGGTTAAAGAGAAGGCGTGTATTACT GTTAGCTATCTAATAGCTGGCGTTAGAAAAATTTCCAAAAGCTAATAAAC AGGGATGTGGTCCTATGGCATGCTCCCCCGCCCAAAAAGTAAAGTAAATT CAAGCTAAAATTAGACTATTTGGGAGCAAAATAAGGCACGGTAATTAACA GACGCTAATAATAAGGCCCGGGCGAGAGGTTGTATAAAAATGAAAAATTA ACAGCNGGCACGGTAATTAACAAACGCTAATAATAAGGCCCGGGCGAGAG GTTGTTTAAAAATTTAAAATTAACAGACAGGCCATTTATTATATTATTAC AGCCTAGGGTTTAGTTTTTTTTACTTGTTCAAAAAGTTAAAATAGTATTA TTCGGTTTTAGATTTCTTTAAACGCATTGTTAATAGTAATATGAGAGGTT TTGATATATTTGGTATTTTGTATATGATAGTATTTGAATTGTATGTAATA ACTTTAGGTAGATATTTTTTTAATATTTCGAATCAATTTATCGGTGTTTT CTATGAAAAACTGCACATAAAAATCACACAAAACTATTTTGTTTTCATGC ATCAGCTGGACCCCTGTGATTTATAAATAATACATTTTCACTGGAGTTAT TTGTTCCGAAAGTACAAATCTACAATTTTAATCGTGC

Coding sequence (CDS) from alignment at sc0000122:169413..180199-

>TCONS_00011230 ID=TCONS_00011230|Name=TCONS_00011230|organism=Clytia hemisphaerica|type=CDS|length=2763bp|location=Sequence derived from alignment at sc0000122:169413..180199- (Clytia hemisphaerica)
AATCGATTAAGCGAACAAGCACGATGGAGGAAGTACACCAAGCTTACATT
GATCGTTTTTCGGACGATGTACGATCCATTTTCGGACAAGACAGTCAAAA
ACTTTTTCTTAAGAACTTCAAGAAAATCTCTCGACTTTTATTTGGTTTAC
AAGTGGAACGGTTAACTCTGGATCAGCTCAGAAATTCATGGTACCTAATA
GGTCAGGATGAATTAGTCGTGATGGCAATACACCAAGATATGGATAGTTT
CCCAAAGCTACTGGGCACATGCGGTCCTGTATACGGCATGGAAAGAATAC
AACCTTATTCAGACTTTTTCCCGCAGCTGACTCCATCGATGCCTTGGAAA
AAACGTGTCAGAATTGCCAAGAATTTCCTACACCTCATCATGGAGTTTGA
ACGTTCAGGAGTAGGCCGGTTACACCATTGTGATGTGCAAGAAGCGAATT
TTGGATTAACCAGAGATTTGAATGTCAAGGCTATTGATGTGGATTTGATN
GAATTTTGGATTAACCAGAGATTTGAATGTCAAGGCTATTGATGTCTAAA
CTATACAATGGGAATTGCTTATGGATCCCTTTGTCCTTCAATATGTATCG
AGAGATCGGTGAGGATTAACTCTTGTATTCACCATGGGACTACGTATGTA
CTTGTCGGTGAACACAATGGTGAAAATATCGTATTAAAGAAAAAGAAGCC
ACATCGCCTTGAAATGAGTGTACAAATTTTTGAAGATGTATTTCAATCGA
AGACTGATGAGAAGACAAAGGAAGCTGGTTTTATGCTCAGCTTTGCTGCT
CATATTCATTATGGTCTACATCATCATCTTTGTGGAGGACCATAACATCA
AAGAAGACCATTTCCATCCGTTTTCTGAAAGATGTATTTCCAACACAGCA
CAGAATATGATCACTGAGCTGAATCGATTAAGCGAACAAGCACGATGGAG
GAAGTACACCAAGCTTACATTGATCGTTTTTCGGACGATGTACGATCCAT
TTTCGGACAAGACAGTCAAAAACTTTTTCTTAAGAACTTCAAGAAAATCT
CTCGACTTTTATTTGGTTTACAAGTGGAACGGTTAACTCTGGATCAGCTC
AGAAATTCATGGTACCTAATAGGTCAGGATGAATTAGTCGTGATGGCAAT
ACACCAAGATATGGATAGTTTCCCAAAGCTACTGGGCACATGCGGTCCTG
TATACGGCATGGAAAGAATACAACCTTATTCAGACTTTTTCCCGCAGCTG
ACTCCATCGATGCCTTGGAAAAAACGTGTCAGAATTGCCAAGAATTTCCT
ACACCTCATCATGGAGTTTGAACGTTCAGGAGTAGGCCGGTTACACCATT
GTGATGTGCAAGAAGCGAATTTTGGATTAACCAGAGATTTGAATGTCAAG
GCTATTGATGTGGATTTGATNGAATTTTGGATTAACCAGAGATTTGAATG
TCAAGGCTATTGATGTCTAAACTATACAATGGGAATTGCTTATGGATCCC
TTTGTCCTTCAATATGTATCGAGAGATCGGTGAGGATTAACTCTTGTATT
CACCATGGGACTACGTATGTACTTGTCGGTGAACACAATGGTGAAAATAT
CGTATTAAAGAAAAAGAAGCCACATCGCCTTGAAATGAGTGTACAAATTT
TTGAAGATGTATTTCAATCGAAGACTGATGAGAAGACAAAGGAAGCTGGT
TTTATGCTCAGCTTTGCTGCTCATATTCATTATGGTCTACATCATCATCT
TTGTGGAGGACCATAACATCAAAGAAGACCATTTCCATCCGTTTTCTGAA
AGATGTATTTCCAACACAGCACAGAATATGATCACTGAGCTGAATCGATT
AAGCGAACAAGCACGATGGAGGAAGTACACCAAGCTTACATTGATCGTTT
TTCGGACGATGTACGATCCATTTTCGGACAAGACAGTCAAAAACTTTTTC
TTAAGAACTTCAAGAAAATCTCTCGACTTTTATTTGGTTTACAAGTGGAA
CGGTTAACTCTGGATCAGCTCAGAAATTCATGGTACCTAATAGGTCAGGA
TGAATTAGTCGTGATGGCAATACACCAAGATATGGATAGTTTCCCAAAGC
TACTGGGCACATGCGGTCCTGTATACGGCATGGAAAGAATACAACCTTAT
TCAGACTTTTTCCCGCAGCTGACTCCATCGATGCCTTGGAAAAAACGTGT
CAGAATTGCCAAGAATTTCCTACACCTCATCATGGAGTTTGAACGTTCAG
GAGTAGGCCGGTTACACCATTGTGATGTGCAAGAAGCGAATTTTGGATTA
ACCAGAGATTTGAATGTCAAGGCTATTGATGTGGATTTGATNGAATTTTG
GATTAACCAGAGATTTGAATGTCAAGGCTATTGATGTCTAAACTATACAA
TGGGAATTGCTTATGGATCCCTTTGTCCTTCAATATGTATCGAGAGATCG
GTGAGGATTAACTCTTGTATTCACCATGGGACTACGTATGTACTTGTCGG
TGAACACAATGGTGAAAATATCGTATTAAAGAAAAAGAAGCCACATCGCC
TTGAAATGAGTGTACAAATTTTTGAAGATGTATTTCAATCGAAGACTGAT
GAGAAGACAAAGGAAGCTGGTTTTATGCTCAGCTTTGCTGCTCATATTCA
TTATGGTCTACATCATCATCTTTGTGGAGGACCATAACATCAAAGAAGAC
CATTTCCATCCGTTTTCTGAAAGATGTATTTCCAACACAGCACAGAATAT
GATCACTGAGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006285XLOC_006285Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011230-proteinTCONS_00011230-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011230-exon-sc0000122-1575043694:179889..180199TCONS_00011230-exon-sc0000122-1575043694:179889..180199Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1575043694:178870..179062TCONS_00011230-exon-sc0000122-1575043694:178870..179062Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1575043694:177520..178215TCONS_00011230-exon-sc0000122-1575043694:177520..178215Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1575043694:169872..170548TCONS_00011230-exon-sc0000122-1575043694:169872..170548Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1575043694:169413..169799TCONS_00011230-exon-sc0000122-1575043694:169413..169799Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1510915933:179889..180199TCONS_00011230-exon-sc0000122-1510915933:179889..180199Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1510915933:178870..179062TCONS_00011230-exon-sc0000122-1510915933:178870..179062Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1510915933:177520..178215TCONS_00011230-exon-sc0000122-1510915933:177520..178215Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1510915933:169872..170548TCONS_00011230-exon-sc0000122-1510915933:169872..170548Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1510915933:169413..169799TCONS_00011230-exon-sc0000122-1510915933:169413..169799Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1491911889:179889..180199TCONS_00011230-exon-sc0000122-1491911889:179889..180199Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1491911889:178870..179062TCONS_00011230-exon-sc0000122-1491911889:178870..179062Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1491911889:177520..178215TCONS_00011230-exon-sc0000122-1491911889:177520..178215Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1491911889:169872..170548TCONS_00011230-exon-sc0000122-1491911889:169872..170548Clytia hemisphaericaexon
TCONS_00011230-exon-sc0000122-1491911889:169413..169799TCONS_00011230-exon-sc0000122-1491911889:169413..169799Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:169413..180199 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.60546 2.70974 1.40127 0.691982 5.44009 4.4303 5.02547 5.75486 3.8493 5.56 4.57788 3.25355 4.10022 2.65143 3.82402 4.15351 5.12256 4.20989 3.27447 4.22891 4.2405 4.23615 4.75424 5.64945 8.95358 8.04583 4.13514 2.90006 7.05305 6.08803
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029244FAM69_N
IPR022049FAM69_kinase_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top