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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011219 ID=TCONS_00011219|Name=TCONS_00011219|organism=Clytia hemisphaerica|type=transcript|length=2638bp
CAATAATATCAACACATAAATAATCCAACAGCAATCTTTCCTTTTCTATT
TCAGCAAATTTAGGGAGACACATTGATTTGAGTAAAAATGGGACAGGAGG
AGACAGCTGGCAAAGAGAGTATGACTCGGCAACAGCTATCCATCCTCCCT
GGATTATTGAGAATGATTTTGAAGAAGTTTGCATCAAAGATGAACGCAAT
TGTGTGGTGGTTGAGATTACCATAGACGGAGAGACAATCACCAAAATGGA
AGGATTTCCTCATTTAGCACAAACAGTGGAAGCCGTACACTACCTTTATC
GTCGGATATTGGGAAGATGTCGTGTCAAAATGTGCAGTGAAAATCATGTG
GCGCATTTCTGTCAGTTATGTTTAAGTGAGGATTCTGACCATCTCACCAA
GCATTGTCCGAAAGGAGTACCACTCTATCATGTCGTTACCGGTATTGTGG
ATCACCTAAATGATTCAGAAGGGTATTTAGGAGGTGGGGTTTATTTCATT
AATAATTTCGATCAAGCCAAACAAATTGCAAAATGTCGTGCCACACAAAA
AGGCGAAAAAACATGGGCGGTATTACACTGTCGTGTGGACTTGGGCGTAC
ACGTTGATCTTGGTGAAGAGTCTGGAAACGAATGGCAGAAAAACTTTGAT
TCTGCGACTTCCCTGCATCCACGAATAGAAGCAACTGAGACGGCCTATCA
AGAAACATGTGTCAAAGATCGATCCAAGTGTTTCGTTATGGAGATAACGC
AAGAAGGTGAAAAGACACAGACACAGGAAGACGGCTTCAGTAGCCCAGAG
ATAAAGAAAGATATCAACCCAGAGATAACGAGAGATACCAACCTAGAAAC
ACCATCACCAATAAGGCGATCCGTGGCCGTGTTTAAGGTCTACATTGGCT
GTGGTGAACAAAACGAAGGATACAAGTCTGATTCCTCTGCAGACGATGAC
ACCGttagagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagtggCGATTCTCTACGTAGCAGTGCTCAGAACAACAAAGAACTTTA
AATCATCCATCGAAATGACAACTTGCACAGGAACTTTGGGCAATGGTTAT
TATTTCTACCAACGAAAAGAGGAAATCAAAGTCACCAGTGAAGAACATGT
CATATTGGAATGCCGTGTCAAGTTGAGCAAACACGTCCGTTTTGAAGACA
AAGCAGTGACAGCTAACTGGCAAAGAGAGTTTAACTCAGCAAGGCAACTC
AATGTAATTTGCTTGAAGGAGGAACTTCGTCAATCGTGCGTTGAAATTGT
GGCTTTTACATACCAGGAGGAGGTGACCGTCAGAAACCAACAAGGCCTCT
CAATTAGTGAGATTGGAGAAATGATAGATAACATAAGACCACTTAGATAT
TATCTGAAACGTTTTTGGTATATCTATGTTATTCAGATAATCATGTTTAT
CTTCCATTCTACGATCGGTATAANAACGTTTTTGGTACATCTATGTTATT
CAGATAATCATGTTTATCTTCCATTCTACTATCGGTATAATGTCTTTGGA
ACATCTTTTCTCAAAAGGTCGTTTGCAGGACAACGAAAATATGAAATCAT
CGCTCATCTCGTTCGCATTCTTCTTTGCAATATCACTTCTTGTTAAAATA
TGTTCCATGatttattgttgtttttcaCGATGGCGTACACTAAATTATGT
GTTAGTAGTAAATGGTTGCAGCGCCTTCATCTTAGAAATGCCCATGCTGG
TTTCACAAACGTGCGCTATGAAGGGGATGAAAAATATCGTATGGCAAGAC
CATTTGAAAGATATGATGGTGTCTTTCGCCTTCGTTGCCAATATTGTAAT
CATAACATGTGTGTGCTCTTCTGTTCTGTTATggttgaagaaaaaagaac
tcgcaatcatttctattgttttgcCGGTACCGATTTGCTTCTTATTTATG
ACACCTGTTTACATTGCACGCTTCGGATTGTTATTTCTACCAGACCACGC
GACATTTTTGTTCGATGGCCAAAAGGTTAATGATTCATTTGCCGTGTTGC
TGATGCAATTAACTGTGTACCTAGGCTTGATCGGCTTATGGATATGGGTC
TTCATTCTTGCGATAGCTGGCGTCATGTTGATAGCAGCAACCTGCAAATT
TGTTTACAAAACTCTTGCAAAAGACTTCAGACGCGGTTTCTTGATCATga
ttattcttattttgttgaatttcgcAAGCACCATTTCTGCTATTGTTGAC
GTCAACCAGTATAGCTATTTGCGTGCCTTTGATTCCGCCGTCACTTTTTT
CGTTCTCTTGACGTTAGCAAGAATATCATATTGCATAAAGAGTTTCCAAA
TGCAAGATCAGCCTATTATCATTATCAACCAAAAATACCCAGGCTTACTT
TACTTTGTAATGACATTCATTTTGGAGATGCCCATGCTACTAAGTTATGT
TGTTATGATAAAACAAATCAAGGAAATCGATGCAGGATGGAAACCCAACG
TACCGGAAAAGCTCCTCCATTATGAGTTTATCTGCAACTATCTTGTGCTC
GTATTCTTGCAGTACATATTGGCTTGGGAAAAAGGAACATGTTCACTAGG
GGATAAAGCATTACATATTGCTCTCCTGATGATATCAT Run BLAST on NCBI protein sequence of TCONS_00011219-protein >TCONS_00011219-protein ID=TCONS_00011219-protein|Name=TCONS_00011219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MEGFPHLAQTVEAVHYLYRRILGRCRVKMCSENHVAHFCQLCLSEDSDHL
TKHCPKGVPLYHVVTGIVDHLNDSEGYLGGGVYFINNFDQAKQIAKCRAT
QKGEKTWAVLHCRVDLGVHVDLGEESGNEWQKNFDSATSLHPRIEATETA
YQETCVKDRSKCFVMEITQEGEKTQTQEDGFSSPEIKKDINPEITRDTNL
ETPSPIRRSVAVFKVYIGCGEQNEGYKSDSSADDDTVREEEEEEEEEEEE
EEEVAILYVAVLRTTKNFKSSIEMTTCTGTLGNGYYFYQRKEEIKVTSEE
HVILECRVKLSKHVRFEDKAVTANWQREFNSARQLNVICLKEELRQSCVE
IVAFTYQEEVTVRNQQGLSISEIGEMIDNIRPLRYYLKRFWYIYVIQIIM
FIFHSTIGIXTFLVHLCYSDNHVYLPFYYRYNVFGTSFLKRSFAGQRKYE
IIAHLVRILLCNITSC Run BLAST on NCBI transcript from alignment at sc0000122:495392..509488+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011219 ID=TCONS_00011219|Name=TCONS_00011219|organism=Clytia hemisphaerica|type=transcript|length=14097bp|location=Sequence derived from alignment at sc0000122:495392..509488+ (Clytia hemisphaerica)
CAATAATATCAACACATAAATAATCCAACAGCAATCTTTCCTTTTCTATT
TCAGCAAATTTAGGGAGACACATTGATTTGAGTAAAAATGGGACAGGAGG
AGACAGCTGGCAAAGAGAGTATGACTCGGCAACAGCTATCCATCCTCCCT
GGATTATTGAGAATGATTTTGAAGAAGTTTGCATCAAAGATGAACGCAAT
TGTGTGGTGGTTGAGATTACCATAGACGGAGAGACAATCACCAAAATGGA
AGGATTTCCTCATTTAGCACAAACAGTGGAAGCCGTACACTACCTTTATC
GTCGGATATTGGGAAGATGTCGTGTCAAAATGTGCAGTGAAAATCATGTG
GCGCATTTCTGTCAGTTATGTTTAAGTGAGGATTCTGACCATCTCACCAA
GCATTGTCCGAAAGGAGTACCACTCTATCATGTCGTTACCGGTATTGTGG
ATCACCTAAATGATTCAGAAGGGTATTTAGGAGGTGGGGTTTATTTCATT
AATAATTTCGATCAAGCCAAACAAATTGCAAAATGTCGTGCCACACAAAA
AGGCGAAAAAACATGGGCGGTATTACACTGTCGTGTGGACTTGGGCGTAC
ACGTTGATCTTGGTGAAGAGTCTGGAAACGAATGGCAGAAAAACTTTGAT
TCTGCGACTTCCCTGCATCCACGAATAGAAGCAACTGAGACGGCCTATCA
AGAAACATGTGTCAAAGATCGATCCAAGTGTTTCGTTATGGAGATAACGC
AAGAAGGTGAAAAGACACAGACACAGGAAGACGGCTTCAGTAGCCCAGAG
ATAAAGAAAGATATCAACCCAGAGATAACGAGAGATACCAACCTAGAAAC
ACCATCACCAATAAGGCGATCCGTGGCCGTGTTTAAGGTCTACATTGGCT
GTGGTGAACAAAACGAAGGATACAAGTCTGATTCCTCTGCAGACGATGAC
GTAAGCTTTTTCTCAGATGGTTGGAGATTTTCAAATGGTTTTGAGAGAAc
ctccaaatcttttttttaagggAAGTTACGACAATATCTCTGATAAGGTT
TTTAAATTAAGATTCCGTTATTTGATTTCTTGCTAAAAGTCATGTTGACA
ATTTTAGGTATTTTAACGTTTCGCCGATCGAATCTTAAGTTTGGGTAAGA
AAAATACGATTTCAACACTTTATATCATTGGATACATCGATTTCAGGAGG
GGCCCAGTgccttctaggctatattttcAGTCTCGTTTgaacatttttga
acttttggatcctgagatcctaaatAAGTCTCAAGTAGAACCAAAATTGC
TCTCTGACATGCGGTTTACTCTATCTCAACCTATCTCACTTTTTCGCTGA
TTTTGTGAGAGGTGGTCTCCAGAGTTCTTCACATAGCCGACATACTCCAa
tcataataaaataataacgGATAACGGGATATGATTAACTGATTCgtgtt
ttctttatttcttttaatAAGAACTAATCAATATATTTCTGATTCCAGAC
CGttagagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagtggCGATTCTCTACGTAGCAGTGCTCAGAACAACAAAGAACTTTAAA
TCATCCATCGAAATGACAACTTGCACAGGAACTTTGGGCAATGGTTATTA
TTTCTACCAACGAAAAGAGGAAATCAAAGTCACCAGTGAAGAACATGTCA
TATTGGAATGCCGTGTCAAGTTGAGCAAACACGTCCGTTTTGAAGACAAA
GCAGTGACAGCTAACTGGCAAAGAGAGTTTAACTCAGCAAGGTACACtaa
ttgtttaaaaattgctaCAAGGAAAAATAATTCGTAatcttgttggaaag
ataatctcTTAAGTTCATTAATGAATGggtttaaactttgaaaaactttg
aaaaataaagaagaaaaaagaagaaaaaaaagaaaaaaaggttttctaAG
GTTTTTTCTGAGACTTTAAGACGCTGATTTCTTTCAagttactttaggcg
tacaaaaacaccaaaatagaaaaatcagtccctggTAGGGAGCCTCGTaa
gaaaatttggggaaaaattagcaaatttgaaaaaaatttggaatttcagt
cccattcagagtcacttttttcgcaaatttcggcaaaaaaaagtccattt
tttgaacctcagcggagcacccccgtcagtcggcaagggtagtaccccct
cTTGGGTTCTTAACAGGGCGATtcgtgaaagtttatgctcgcgaaaaatt
atcgaaaaatttcgaaatctataaaacctcgaaatcgtaataaatatcaa
atttttggcaTATTTTTATCCTTTGATGCCTTTTTAAGAGCAACTGTCTT
AATCGGATTTAAGGAAtacttttcacttttaaggcacTTTTCATTCGAGc
attaaaatttttatccaatGTTTCGTGAAAGTTAATGCtggcgaaaaaca
ttttttcctcaaatttgcgaaagtaaTTGTCGTAATTTTCGCAATCCCTC
GACCTAGCGAAAGTctctgctcgcaaaagtttgtacgacTGAAGTAAGCT
CTGAAAACTTTCGTGGAAAGTCTATTACGGCCATTTTGAATCATAGATTA
TAGCCGGTTTGattaaatcaaacaaaaaaagccaaagatagcacagaaaa
atgtttttgatttctaaggttggaaatttcaagatttcttaGTTGGGAAa
tagataaaatccaatggaaaatccagcGTGGAAACTGTGGACACTCTCCA
AGgatggaaattttgcattttccatggcttggaattctcaaaaatccagg
ttgaaaaaatccACAATCCATCCAAACTAAACaaacttggaattttcaaa
aatccaggttgaataaagccaaaatccaagctaaaaatgttggaattttc
aaaaatccaggttaaaaaaagccaaaatccaaaaagtgatgacagAGATG
Cggaaaaagagatcttaaacaaggtttttgtttttgtgaacagtcactcg
ctagcctaggctcgatggctcccggtcaatctctcgttattgttcgcaca
gttacgtggttgatcttagatcactcacacagctcagcagNTTCTTTAGA
ttactcacacagctcagcagggcaccatttgaaactatgacacaagtaca
tTATGTGCTTagctgtgcgaactcactgcgattgaccgaggccgctccga
agagacACCTCACTTGAcagaaacttacagcttgactgctcacattatgg
GACAaactggagtttttacaagctctcgtttgatttggttggtcgttaac
ctgtactaaaacaattttgttactttttctaaagaacgcgtcatctctat
taatacaaataaccaattagtgaagtctcttgtaaaaactccagcccatC
CCCACATTATAGCCTAATTAATATCTAGGTTAGATATACATCACGACAGT
TCTGCGCAAAAAGTGATTTTCtcaaaggacatgcgcagaaaatggtacaa
aaacgtaatttccacatgggtTTTTaccgttttccaaactgtttgcaGAA
ACACACATTTCCAACGCAAAAAGACTAGTTTTCCAAGGAGGAGTCTCAAT
TTCACAATAATGTAATCCACATGAATTTTTAACGCTTTCCAGACTCaaaa
ttgaatttccaaccttggaaatcgaagttttgtaaatatggaaatgtGAC
TTTGCTTTCCAAAGTTGTGGAAATaccatatttcatgatatttccaaatc
tgaaaatcatattttcaaaatatttccaacttttggaaatatgatatttc
aaaaattggaaatatcttgaaaatatgatgttttaatGCACATCACAACT
TTGGTTGTGTTCTATAGTTCCAGGATTgaaaatctcttatttcgcccagt
gaaaaataaaagacaTTTTCTCCTTTTCTCCTTTAGGCAACTCAATGTAA
TTTGCTTGAAGGAGGAACTTCGTCAATCGTGCGTTGAAATTGTGGCTTTT
ACATACCAGGAGGAGGTGACCGTCAGAAACCAACAAGGCCTCTCAATTAG
TGAGATTGGAGAAATGATAGATAACATAAGACCACTTAGATATTATCTGA
AACGTTTTTGGTATATCTATGTTATTCAGATAATCATGTTTATCTTCCAT
TCTACGATCGGTATAANAACGTTTTTGGTACATCTATGTTATTCAGATAA
TCATGTTTATCTTCCATTCTACTATCGGTATAATGTCTTTGGAACATCTT
TTCTCAAAAGGTCGTTTGCAGGACAACGAAAATATGAAATCATCGCTCAT
CTCGTTCGCATTCTTCTTTGCAATATCACTTCTTGTTAAAATATGTTCCA
TGatttattgttgtttttcaCGATGGCGTACACTAAATTATGTGTTAGTA
GTAAATGGTTGCAGCGCCTTCATCTTAGAAATGCCCATGCTGGTTTCACA
AACGTGCGCTATGAAGGGGATGAAAAATATCGTATGGCAAGACCATTTGA
AAGATATGATGGTGTCTTTCGCCTTCGTTGCCAATATTGTAATCATAACA
TGTGTGTGCTCTTCTGTTCTGTTATggttgaagaaaaaagaactcgcaat
catttctattgttttgcCGGTACCGATTTGCTTCTTATTTATGACACCTG
TTTACATTGCACGCTTCGGATTGTTATTTCTACCAGACCACGCGACATTT
TTGTTCGATGGCCAAAAGGTTAATGATTCATTTGCCGTGTTGCTGATGCA
ATTAACTGTGTACCTAGGCTTGATCGGCTTATGGATATGGGTCTTCATTC
TTGCGATAGCTGGCGTCATGTTGATAGCAGCAACCTGCAAATTTGTTTAC
AAAACTCTTGCAAAAGACTTCAGACGCGGTTTCTTGATCATgattattct
tattttgttgaatttcgcAAGCACCATTTCTGCTATTGTTGACGTCAACC
AGTATAGCTATTTGCGTGCCTTTGATTCCGCCGTCACTTTTTTCGTTCTC
TTGACGTTAGCAAGAATATCATATTGCATAAAGAGTTTCCAAATGCAAGA
TCAGCCTATTATCATTATCAACCAAAAATACCCAGGCTTACTTTACTTTG
TAATGACATTCATTTTGGAGATGCCCATGCTACTAAGTTATGTTGTTATG
ATAAAACAAATCAAGGAAATCGATGCAGGATGGAAACCCAACGTACCGGA
AAAGCTCCTCCATTATGAGTTTATCTGCAACTATCTTGTGCTCGTATTCT
TGCAGTACATATTGGCTTGGGAAAAAGGAACATGTTCACTAGGGGATAAA
GCATTACATATTCTTCTTCTGATGATATCATGTCCATTTTGCTATTACCC
AGCATACGTCACAGAAAATGGATTTGATACAGTCAGCCAGCAGAATAATA
TCAATAATGCCCCGttcttgaccatttttggtTTAATAGGATTTTACGTT
GCACAAACGGTAATTGTGGTGTCactgttttgtttattttttcggTATTG
TGTCAAGAATGATGACCCTAGTCCGAATCACAGATTTCGACAATACCGCA
GACCTCGACAATAAAACCACATACAATAGGTCTGCTTAATTTACTACCCG
CTTTCTGGTTcggtttttcatttcaatgaattttaCAGAAGCTTTGAAGA
GTTTATTATTTGATTTACATCGAGGTGAAAACAATAACAATCGCTGCCTC
GTAAAATAGCAAAGCCTGGGGTAAGACCTAATAAGACCAGGGGGTAACGT
ACTATATTTTTCTTTGAGCAGATATTCCTAGAGTTATAAATAATTTCAAC
TAAACACTTTTGGCACATAGTTTGGAAGAAACTAAAGactaatcaaaatt
atttttgaaaaatttatttcaggGAGTCTGGAAACTAAACTTTGTAAATC
TTGAGCTTCAGAAGAAGTGAAACACAAGGCTGACTTTtttcaatcctgag
aaatttCCACTAAATCGCTTGCAAACCACCTGAAACGCATTTAAAGAATT
ATAAAGAGTTCAGAAATAGGAAGCACACTCGATATTTTATTTATAGGAGT
ACCCCAAGGGTCTATTCTTTGGCCATTACttttaaatatatttataaACG
ATCTATTTTATAtcatagatgaaattttaaattttgcagatgatAATACT
TTATGTTCTTCTGGATCAAACTTAGATGAAGTTAACGCAAACCTTTTACA
CCAACTAAGCATTGTTTTTGATTGGTTTAAGCATAACTCAATGATTGCAA
TCTCTTCTAAGTTTCAACTAATTCACCCAGTACTTTTAACGTCGACGTTT
CTCTTCCTGTTGGTAAAAACCATATTAAGAACGTCGACTTTGTGAAACTT
CTGGGTATTataattcaatgaaaaattatcttttatttCTCACGTCCCGA
ACTTTGTAAAAGAACTAACCAAAAACTAAGTGCATTGAGAAGGATGGGAC
GACACTTTCTATACGAAGATCAAACAAAGCTTCTTATATAATAAATTCCT
ATATTTGTATTTGGtgtactcttgggtacctaatagccggggggggtttg
gaataagccgggggaattggaaaaaatctcaaaaattaatacgcggggga
gggggggttggaataaaaatgtcccgggtggaagatttttgaaaaggagg
ctaatacagcagaattaagacaaaagtgggaactttcaaaagcattttcc
gaaaaattaataagcgggcggggggacggctattaggtacccgagagtaa
acaCATTTgactttaaagctattttaaccTGGAACAAACTACCATACTCT
ATTAAGTCgctttaaaatttagaatttaaaattttagcATTTAAGAATTC
TCTAAAAAAGGTCTTACCTGTCTGCACTTGTAAAAATTGTAAGTAGTTTT
TCTTTAGGCtcgttcttcatttttttcactagatattttttaatgttttt
atgacAGTTGGATTTAATTACTTGTAATTTGCTAGATACCACCTGattta
aaataaagaataaataaacaaaggcaaaagaaaaagaaaacgcaATTTTT
TAGGACAAAATGCATAGTTGTCCCTTTTTTTCAGCCTTTTTAACTGTATT
TGTAAAACAACCCACATAAGCAgtgtaaaaatcaaaaacgtCCAAAATCC
TTgcattttttccctttttcgtGTTGCGCCAAATTACATTAAAggagaaa
atttggcggatttgttaaaaaaatgtctttcgtctgccaaatttaatttt
tcaaaaatttcttcctaaggaagaaattttggcgtttggcgggaacttaa
tttggcggatttggtcgAAATCTGccaaatagacgatatcggcttaacga
aattctccccgaatgattacccatggtgcattgcgcaaaaaaattcagta
agtcaatatagtccgtgaatttttttgcgcaatgtatcatgggtaatcat
tcggggagaattcgttaagccgatatcgtctattaaatccccgccaaatt
taatttattcattctcagcctcagcatgtttcttagatgttttcttaaga
aaaaaacgtgtacatctaACTTCAACAATTTCTCCCCCCAATTAATATCC
CGAAACCCCTATCCCCCCATTATGGTGAAAATATTCACTTCACATGAATG
GATTTTcgaaatcgagagtcaaatattgtccaaattttaccaattttaag
tgctctttattttgcatgatattgtcgatttagagaagtctgaaaattat
aagaacgcatctaagaatatttcaggctgaaaattgctaaaataataagc
acatccaggctcagccaaattttaggtgttctaataaaaaaacaaacgtg
tactCTTCGGAATATGCgaactgctcttgttttgaatattgaatttctcc
AGATACATCGCATATGCACTAGGGTTTTAGCgcgaaacaatagagagttt
cgaagcctaagccaatcagctgtgttttaaacattcttttatttgaaatc
tctattgataaagttcttttgttaaaaacttcTATTAAACGCTATTATGC
TTAATccaattaaaaagcaaattcccGGTGGGGGCAACTAGTGGCCGCAT
agagcagtgcctatagaccaagagtagaaggcctaaaagcctggaacTGT
ATAATATGTAGACTAAGATTATAGCCGGTTTGattaaatcaaacaaaaaa
gctAAAGATCACAGgataaaattttcgatttccaaggttggaaattttaa
gttttcttttagttagcctccgtctcagaacgcggtcagaaaattttgcg
gataatttcacagcgaaaatgcatccagtgaaatgtgagtaatgtatcat
gattcaagtcgactgacatagtTATACACAtgatacatgttacaagttct
gcctacggtttctcaagctcggctataataaaactattacatgttaatag
cagacccgactgaccaatgttatgtagcaggttgaaacatgagtttctgc
tggaaagatgcagtttgttttcaagttaaatcttcaaaataaaNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttat
gaactttctagaacaataatcttgctccaatcatgagaaacactggaaaa
ataggttagcattctctgccataatttcacagatttcctctgctttctgc
ttgaaaacgctgtcgcatagccgaaaacgaaagtgaaactgtgaaaacgt
ccgcaaattcgggcccagtcctcttccgagacggaggctagttggaaaaa
aagataaaatccaatggaaaatccaacctggaaatgtgggacattctcca
aggttggaaattttcattttccatggcttgaaattttaaaaaatccaggt
tgaaaaatgccaaaatccaaatttaataaggctggaattttttaaaattc
agttggaaaaaagccaaaatccaaagtaaacaaacttggaattttcaaaa
atccaggttgaataaagccaaaatccaagctaaaaaaggttggaattttc
aaaaattcaggttgaaagaagccaaaatccaaaaagtgatttcagagatg
tggaaaaagagatcttaaacaaggtttttgtttttgtgaacagtcactcg
ctagcctaggctcgatggctcccggtcaatctctcgttattgttCGCACA
GATACATGGTTGATCTTAGATCACTAAcacacacagctcagcagggcacc
atttgaaactatgacacgaataccctatgtgcttcactgtgcgaactcac
tgcgattgaccaaggccgctccgaagggacgcctcacctgacggacaCCT
ACAGCTTGACTACTCACATTATAGCCTGATgtctaggttagctatacatc
aaaacagttttgagcgaaaaattgcttgtggttttctcaaaggacatgcg
cagaaaatggtacaaaaacGTAATTTTCACCAgggatacatgtttttttt
tataagcaagtgtatgccccttggtcaggctcgagtatgcttaagctttc
aaaTTATCCAGACATAgaatatgcttattatatgcttaagaattattatg
cttttgattcacccaaccaaattttttagtaaaatctttaaaaatttttg
ttaatattcgattcaaaaagcatttaaatttttgagcagtggaatgtggc
tAGCCGCGGaatgtatttttttacttgaccacttgCAAACCTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAGGCTagcgtatatgcttatgttatgcttaggaaatctgcaaatctgag
ccttcatatgcttataagcgttatgcttataaaaaaaaaacatgtatcat
aTCCCTGTTTTcacaaactgtttggagaaacacacaTTTCCAACGCAAAA
AGACTAGTTTTCCAAGGAAGAgtctcaatttcacaaaaatgtaatttcca
catcgatttttgcatttttgacgCTTTTTCAATTcacaaactgtttggaa
aaataaTAATGTTCCACCCAAAAAGTAATcttttccaaccttggaaaatt
gtcatttctacattgtttttttttttttgcacttgatttttcaagggcat
tggtttactctacaaaacctatgggtaatttacgttttccaaatcagctt
aaagtaataaatttccaaccttagttataaaaccaaaatttccaacccaa
aaatattgaatctcCAAcattggaaatcgaaaattattTCCTGTGTAGTA
TAAACCGGAAAATTTAATACGTAAAACGCATTTTCTTTCAATGTTTACAG
ATCTTTATCGAGTTTGTTAAGTTATCGCCTATTCGGATATCTTAAGCCTT
AAGCAGgctgtattttttatttataaagaaaagaaaaagctgTAGGgaaa
cactgggcgaaataaaagatttcaaatcctggaaatatcttgaaaatatg
atatttccatattcttttgtaaatatggaaatatgactttgctatatttc
caaagttgtggaaataccatatttcatgatatttccaaatctgaaaaatc
atattttcaaaaaatttccaacttttggaaatatcttgaaaatatgatgt
ttcaatgcACATCACAACTTTGGTTGTGTTCTATAgttccaggattggaa
atctcttatttcgcccagtgaaaaataaaagacaTTTTCTCCCTTTCTCC
TTTAGACAACTCAATGTAATTTGCTTGAAGGAGGAACTTCGTCAATCGTG
CGTTGAAATTGTGGCTTTTACATACCAGGAGGAGGTGACCGTCAGAAATC
AACAAGGCCTCTCAATtagggggggcgtacgggatatcggtacatcggta
ttggcctttttttaggtcggtaaatcggtattacagGAAAAAAATGATCG
GTACTCGGTATTTCAAAATCATCTCGGTATCGGTAAAAGACCCATTTtta
tgtcggtatttcggtattttcggNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcggt
atttcggtattttcggTCAACCATCGGTATCAAAGATCATGAGCCATTGC
GCCCCAAGACCAAATTTGGtgagataaattttaaaatcttgcaatttctt
tcgctcgcttcgctcgcaataaagttcTTTCACAATCtaccaatacactc
ttctcgagatgcataaataagcattgcaggcctcgttttcaaatattGTT
GCCTAAGTAACTCAACGTCATTTGACATGTAATTATCTTTTTGTAAATGT
GCgtgcttttgttttaaaactgatAACTTCCTTTTGGAAATGCATTTACG
TCTAcgtaaattgaatgttgaataattattctgCTTGCGAACGAGGCCAG
CAATGCtttctcgagaagagtgtatttggcgaacacaaaatttaaaacaa
aaaaattaattttttttgctcgcttCTTCTATATCTTCTTGATAAGTATC
AAATTCATGGTTTTTTTAGAGTTTATGTTATTTGGTTGACTTtcacaaat
tttctatttggcttAAGCCTCCTTTACTATTCGAATATATGAACGCTATG
TTCTGAGCGCTGATCTACTAAATAATCCCTCCCTCATACGTAAACTAGTA
CAAATTAAGGAACACTCAGGGGCGGCGATTTGAAAAATCATTGCTGCAAT
TTTGATAAGGCAAGAGGCTCAGCCAGGTCTGCTTGACACGTGAATGACCA
TTTTTCTGCcgtgaatacagttgacgctctctgaCGCGTTTTGACAGGGG
GCCACGCCTCCCCAAGTTGAGCTTTTTTGaacgccaaaatcttgaaattA
CCCTAAACTGTAATTGATCGCCCcccaccaaaaaaaaaaataattgacca
aaaaggtcaaagttttccCAACAGAATGTGAAGGGGTTTGTAgtttttgt
gacctttttctggctACCNGTCAAAATTTTCTCAACAGAATGTGAAGGGG
TTTGTAgtttttgtgacctttttctggctacctttgacctttttaaggcc
tcctttttaagctgtttgatatttcttagaccaaatttttcgcctgcggc
gccaaGATTACAAAGCAAACTCTCTGCGACATGAAATTTTATGCTTTCTA
CACTTtatgtgaccttattctcgctAACTTTGACCTTGCTTAGAGCAAAA
ATttactctgaaaaaactttctctcaaaatttcccctaaaaaaagtcaaa
atttttccaatctcCCCCCTCCCCCGAAACGAAAACTCGTGGCTACGCCT
CTGCTAGGCTTTACTCAATCCATGTACCTACCCAACACGCTACGGTTTGG
TAATTGGTAATTGTTATAgagaattttggatgatgaaaaacccgaccttt
ATCGTCCGCACATACCAGGCACCCATCTTTGCCTAAGTACCTCCTCCGAT
CCGGAGGACGAGTAcctaaaaaatgtgaaaaaattgatcggtatcggtat
ttgaacgagaaaattatcgatatatcggtaattgagagaaaaagtgatcg
gtatatcggtattacgaagtcccgtacgccccccacaatTAGTGAGATTG
GAGAAATGATAGATAACATAAGACCACTTAGATAGTATCTGAAACATTTT
TGGTACATCTATGTTATTCAGATAATCATGTTCATCTTCCATTCTACAAT
CGGTATAATGTCTTTGGAACATCTTTTCTCAAAAGGTCGTTTGCAGGACA
ACGAAAATATGAAATCATCGCTCATCTCGTTCGCATTTTTCTTTGCATTA
TCACTTCTTGTTAAAATGTGTTCCATGATTGGATGTTGCTTTTCACGATG
GCGTACACTACATTATATATTAGTAGTAAATGGGTGCATCGCCATCATCT
TAGAAATGCCCATGCTAGTTTCACAAACGTGCGCTATGGAGGGGATTAAA
AATATCGTATGGCAAGACCATTTGAAAGATATGATGGTGTCTTTCGCCTT
CGTTGCCAATATTGTAATCATAACATGTGTGTGCTCTTCTGTTCTTTTAT
ggttgaagaaaaaagaactcGCAATCCTTTCTATTGTTTTGCCGGTACCG
ATTTGCTTCTTATTTATGACACCTGTTTACATTGCACGCTTCGGATTGTT
ATTTCTACCAGACCACGCGACATTTTTGTTCGATGGCCAAAAGGTTAATG
ATTCATTTGCCGTGTTGCTGATGCAATTAACTGTGTACCTAGGCTTGATC
GGCTTATGGATATGGGTCTTCATTCTTGCGATAGCTGGCGTTATGTTGAT
AGCAGCAACCTGCAAATTTGTTTACAAAACTCTTGCGAAAGACTTCAGAC
GCGGTTTCTTGATCATgattattcttattttgttgaatttcgcAAGCACC
ATTTCAGCTATTGTTGACGTCAACCAGTATAGCTATTTGCGTGCCTTTGA
TTCCGCCGTCACTTTTTTTATTCTCTTGACGTTAGCAAGAATATCATATT
GCATAGCGAGTTTCCTAAAGCTAGATCAGCCTATCAACCAAAAATACCCA
GGCTTGCTTTACTTTGTAATGACATTCATTTTGGAGATGCCCATGCTACT
AAGTTATGTTGTTATGATAAAACAAATCAAGGAAATCGATGCAGGATGGA
AATCCAACGTACCGGAAAAGCTCCTCCATTATGAGTTTATCTGCAACTAT
CTTGTGCTCGTATTCTTGCAGTACATATTGTTTTGGGAAAAAGGAACTTG
GTCACTGATGCACAAAGCATTACATATTGCTCTCCTGATGATATCAT Coding sequence (CDS) from alignment at sc0000122:495392..509488+ >TCONS_00011219 ID=TCONS_00011219|Name=TCONS_00011219|organism=Clytia hemisphaerica|type=CDS|length=4203bp|location=Sequence derived from alignment at sc0000122:495392..509488+ (Clytia hemisphaerica)
ATGGAAGGATTTCCTCATTTAGCACAAACAGTGGAAGCCGTACACTACCT
TTATCGTCGGATATTGGGAAGATGTCGTGTCAAAATGTGCAGTGAAAATC
ATGTGGCGCATTTCTGTCAGTTATGTTTAAGTGAGGATTCTGACCATCTC
ACCAAGCATTGTCCGAAAGGAGTACCACTCTATCATGTCGTTACCGGTAT
TGTGGATCACCTAAATGATTCAGAAGGGTATTTAGGAGGTGGGGTTTATT
TCATTAATAATTTCGATCAAGCCAAACAAATTGCAAAATGTCGTGCCACA
CAAAAAGGCGAAAAAACATGGGCGGTATTACACTGTCGTGTGGACTTGGG
CGTACACGTTGATCTTGGTGAAGAGTCTGGAAACGAATGGCAGAAAAACT
TTGATTCTGCGACTTCCCTGCATCCACGAATAGAAGCAACTGAGACGGCC
TATCAAGAAACATGTGTCAAAGATCGATCCAAGTGTTTCGTTATGGAGAT
AACGCAAGAAGGTGAAAAGACACAGACACAGGAAGACGGCTTCAGTAGCC
CAGAGATAAAGAAAGATATCAACCCAGAGATAACGAGAGATACCAACCTA
GAAACACCATCACCAATAAGGCGATCCGTGGCCGTGTTTAAGGTCTACAT
TGGCTGTGGTGAACAAAACGAAGGATACAAGTCTGATTCCTCTGCAGACG
ATGACACCGttagagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagtggCGATTCTCTACGTAGCAGTGCTCAGAACAACAAAGAA
CTTTAAATCATCCATCGAAATGACAACTTGCACAGGAACTTTGGGCAATG
GTTATTATTTCTACCAACGAAAAGAGGAAATCAAAGTCACCAGTGAAGAA
CATGTCATATTGGAATGCCGTGTCAAGTTGAGCAAACACGTCCGTTTTGA
AGACAAAGCAGTGACAGCTAACTGGCAAAGAGAGTTTAACTCAGCAAGGC
AACTCAATGTAATTTGCTTGAAGGAGGAACTTCGTCAATCGTGCGTTGAA
ATTGTGGCTTTTACATACCAGGAGGAGGTGACCGTCAGAAACCAACAAGG
CCTCTCAATTAGTGAGATTGGAGAAATGATAGATAACATAAGACCACTTA
GATATTATCTGAAACGTTTTTGGTATATCTATGTTATTCAGATAATCATG
TTTATCTTCCATTCTACGATCGGTATAANAACGTTTTTGGTACATCTATG
TTATTCAGATAATCATGTTTATCTTCCATTCTACTATCGGTATAATGTCT
TTGGAACATCTTTTCTCAAAAGGTCGTTTGCAGGACAACGAAAATATGAA
ATCATCGCTCATCTCGTTCGCATTCTTCTTTGCAATATCACTTCTTGTTA
AATGGAAGGATTTCCTCATTTAGCACAAACAGTGGAAGCCGTACACTACC
TTTATCGTCGGATATTGGGAAGATGTCGTGTCAAAATGTGCAGTGAAAAT
CATGTGGCGCATTTCTGTCAGTTATGTTTAAGTGAGGATTCTGACCATCT
CACCAAGCATTGTCCGAAAGGAGTACCACTCTATCATGTCGTTACCGGTA
TTGTGGATCACCTAAATGATTCAGAAGGGTATTTAGGAGGTGGGGTTTAT
TTCATTAATAATTTCGATCAAGCCAAACAAATTGCAAAATGTCGTGCCAC
ACAAAAAGGCGAAAAAACATGGGCGGTATTACACTGTCGTGTGGACTTGG
GCGTACACGTTGATCTTGGTGAAGAGTCTGGAAACGAATGGCAGAAAAAC
TTTGATTCTGCGACTTCCCTGCATCCACGAATAGAAGCAACTGAGACGGC
CTATCAAGAAACATGTGTCAAAGATCGATCCAAGTGTTTCGTTATGGAGA
TAACGCAAGAAGGTGAAAAGACACAGACACAGGAAGACGGCTTCAGTAGC
CCAGAGATAAAGAAAGATATCAACCCAGAGATAACGAGAGATACCAACCT
AGAAACACCATCACCAATAAGGCGATCCGTGGCCGTGTTTAAGGTCTACA
TTGGCTGTGGTGAACAAAACGAAGGATACAAGTCTGATTCCTCTGCAGAC
GATGACACCGttagagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagtggCGATTCTCTACGTAGCAGTGCTCAGAACAACAAAGA
ACTTTAAATCATCCATCGAAATGACAACTTGCACAGGAACTTTGGGCAAT
GGTTATTATTTCTACCAACGAAAAGAGGAAATCAAAGTCACCAGTGAAGA
ACATGTCATATTGGAATGCCGTGTCAAGTTGAGCAAACACGTCCGTTTTG
AAGACAAAGCAGTGACAGCTAACTGGCAAAGAGAGTTTAACTCAGCAAGG
CAACTCAATGTAATTTGCTTGAAGGAGGAACTTCGTCAATCGTGCGTTGA
AATTGTGGCTTTTACATACCAGGAGGAGGTGACCGTCAGAAACCAACAAG
GCCTCTCAATTAGTGAGATTGGAGAAATGATAGATAACATAAGACCACTT
AGATATTATCTGAAACGTTTTTGGTATATCTATGTTATTCAGATAATCAT
GTTTATCTTCCATTCTACGATCGGTATAANAACGTTTTTGGTACATCTAT
GTTATTCAGATAATCATGTTTATCTTCCATTCTACTATCGGTATAATGTC
TTTGGAACATCTTTTCTCAAAAGGTCGTTTGCAGGACAACGAAAATATGA
AATCATCGCTCATCTCGTTCGCATTCTTCTTTGCAATATCACTTCTTGTT
AAATGGAAGGATTTCCTCATTTAGCACAAACAGTGGAAGCCGTACACTAC
CTTTATCGTCGGATATTGGGAAGATGTCGTGTCAAAATGTGCAGTGAAAA
TCATGTGGCGCATTTCTGTCAGTTATGTTTAAGTGAGGATTCTGACCATC
TCACCAAGCATTGTCCGAAAGGAGTACCACTCTATCATGTCGTTACCGGT
ATTGTGGATCACCTAAATGATTCAGAAGGGTATTTAGGAGGTGGGGTTTA
TTTCATTAATAATTTCGATCAAGCCAAACAAATTGCAAAATGTCGTGCCA
CACAAAAAGGCGAAAAAACATGGGCGGTATTACACTGTCGTGTGGACTTG
GGCGTACACGTTGATCTTGGTGAAGAGTCTGGAAACGAATGGCAGAAAAA
CTTTGATTCTGCGACTTCCCTGCATCCACGAATAGAAGCAACTGAGACGG
CCTATCAAGAAACATGTGTCAAAGATCGATCCAAGTGTTTCGTTATGGAG
ATAACGCAAGAAGGTGAAAAGACACAGACACAGGAAGACGGCTTCAGTAG
CCCAGAGATAAAGAAAGATATCAACCCAGAGATAACGAGAGATACCAACC
TAGAAACACCATCACCAATAAGGCGATCCGTGGCCGTGTTTAAGGTCTAC
ATTGGCTGTGGTGAACAAAACGAAGGATACAAGTCTGATTCCTCTGCAGA
CGATGACACCGttagagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagtggCGATTCTCTACGTAGCAGTGCTCAGAACAACAAAG
AACTTTAAATCATCCATCGAAATGACAACTTGCACAGGAACTTTGGGCAA
TGGTTATTATTTCTACCAACGAAAAGAGGAAATCAAAGTCACCAGTGAAG
AACATGTCATATTGGAATGCCGTGTCAAGTTGAGCAAACACGTCCGTTTT
GAAGACAAAGCAGTGACAGCTAACTGGCAAAGAGAGTTTAACTCAGCAAG
GCAACTCAATGTAATTTGCTTGAAGGAGGAACTTCGTCAATCGTGCGTTG
AAATTGTGGCTTTTACATACCAGGAGGAGGTGACCGTCAGAAACCAACAA
GGCCTCTCAATTAGTGAGATTGGAGAAATGATAGATAACATAAGACCACT
TAGATATTATCTGAAACGTTTTTGGTATATCTATGTTATTCAGATAATCA
TGTTTATCTTCCATTCTACGATCGGTATAANAACGTTTTTGGTACATCTA
TGTTATTCAGATAATCATGTTTATCTTCCATTCTACTATCGGTATAATGT
CTTTGGAACATCTTTTCTCAAAAGGTCGTTTGCAGGACAACGAAAATATG
AAATCATCGCTCATCTCGTTCGCATTCTTCTTTGCAATATCACTTCTTGT
TAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011219-exon-sc0000122-1491911889:495392..496341 | TCONS_00011219-exon-sc0000122-1491911889:495392..496341 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1510915933:495392..496341 | TCONS_00011219-exon-sc0000122-1510915933:495392..496341 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1575043694:495392..496341 | TCONS_00011219-exon-sc0000122-1575043694:495392..496341 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1491911889:496890..497182 | TCONS_00011219-exon-sc0000122-1491911889:496890..497182 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1510915933:496890..497182 | TCONS_00011219-exon-sc0000122-1510915933:496890..497182 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1575043694:496890..497182 | TCONS_00011219-exon-sc0000122-1575043694:496890..497182 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1491911889:499328..500698 | TCONS_00011219-exon-sc0000122-1491911889:499328..500698 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1510915933:499328..500698 | TCONS_00011219-exon-sc0000122-1510915933:499328..500698 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1575043694:499328..500698 | TCONS_00011219-exon-sc0000122-1575043694:499328..500698 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1491911889:509465..509488 | TCONS_00011219-exon-sc0000122-1491911889:509465..509488 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1510915933:509465..509488 | TCONS_00011219-exon-sc0000122-1510915933:509465..509488 | Clytia hemisphaerica | exon |
| TCONS_00011219-exon-sc0000122-1575043694:509465..509488 | TCONS_00011219-exon-sc0000122-1575043694:509465..509488 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:495392..509488 + |
Blast
The following BLAST results are available for this feature:
|
