TCONS_00011209 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011209
Unique NameTCONS_00011209
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1663

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011209 ID=TCONS_00011209|Name=TCONS_00011209|organism=Clytia hemisphaerica|type=transcript|length=1663bp
TTTAGATATAACTTTATAAAcaaattctatttttccttgCTTGGTTGTAA
GACTAATATGACATGATGAAATGGCTGCACTTATTGCACCAAGACCAAAT
TCGCATCCCTTTCAAGAAAGGCAGCTATCACTCAAGGAACCAATAAAGAT
TGGAAGAGCAGTTGCAAAGGCCAAAGCAACACAAAATAATGGCATCTTCG
ATTGTCGTGTTCTTTCCCGAAACCATGCTATGCTCTGGTATGAAAATGGA
AAGTTCTTCCTCCAAGATACAAAAAGCAGCAATGGAACATTTGTCAATGG
CGTTCGATTGAGCCGTGGGGCTGAGGAAAGTGAGCCCTGTGAAATCAAGT
CTGGTGATATTTTACAATTCGGTGTTGAAGttgttgaaaatacaaaaaat
gtGACACACGGATGCATCATAGGGCTTGCAACGCTTTTTCATGAAGATGG
AACTGAAGCAACTGGgGCAAATGAGGAACCCCAAAGTGTACTATCCTTGG
CCTCTGGTGATAAACCTATCCAACCAAAAGAACTGTGGCAATTATCCCAG
TTTCTTCAGGATGCCTTACATCGTGAGCAGATGCTTGAAAACAAACTAGC
AACTTTGCAAAGAATGATTTCCAATTCTCATGCAGCATCAGACGACACAT
TCCAGGGCTTCATACAAGAGGATAAAGTCTTATCAAGGCTGGAAACTCTG
GAGAATCAATTGGAACTCGTCTCACAGGAATTGCCAGAGGATGAGCCTCA
AACACAACTCATGGCATATCAAGATGAAAGACTTGAATACGAATCAGCTG
CTAAGGAAACGCTGCAGAAAATCCTACAAGAGAAGATAGAAGTACTACAG
AAATGCTCTGATCTTGAGCGACTTTTGAGTAACACAGAGGACGAATGCAC
ATTTTTACGAAACACttgggaaaaatcaaaagaagaatTAGGGACGTTAA
TGGAAAGACACACACAGCTAATGGACGAGTTGAAACAAGTCAAAGAGGAT
ATGACCTCAGCTGAACAAAAACATGAAGCTACCCAACAACAGACGATATC
AGAAAAGAAAGAACTTAAAGGTCAATTAGAAGATGCAGAAAAACGTGGAA
GCTCTTTAGCTGTAGAGGTGGAATCACTGCAAGCTGAATGTGATTTTACA
AAGCAACAGCTACAAGCCATGAAAGAACGTCTGGAGACAAAGcagaagga
agaagaagaagACCATGCAACTTTGGAAAAAGATGTCAAGAATAAAACAG
CTTTGATCCGATCTTTAAAAGAACAAATAGCAGAAATGCAAGCAAAATAT
GAAATGGAACAACTCAATAAGTCAACAGCAGATGACAAGAATGATGATTT
CAACGAACATTTAGAGATCAGCTGCACACAAATCAAAGAGCTAGACGGTG
TTCTTCAGTCGGTTGCCGTTACGTTGAATACATGGTCTGATGGGTTGATG
GCAGGTGTGGAAACCAGTACATCATTTCATTACAGCGAAATCCAAACCac
aacaaatcaaaacaagGAAGacTGTATTGTCAATCAACAAAAAGCCATTA
TGGCGTGCTCGGAATTCCTTAATAATGTAAAGAaacaTTTCGAAGACGTT
ATCGCTAGAGCACCAATAGAACGAGAGCTCAGTCACAATTCAACCGATGA
ATCGATTAAAGGT
Run BLAST on NCBI

transcript from alignment at sc0000122:451276..462054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011209 ID=TCONS_00011209|Name=TCONS_00011209|organism=Clytia hemisphaerica|type=transcript|length=10779bp|location=Sequence derived from alignment at sc0000122:451276..462054+ (Clytia hemisphaerica)
TTTAGATATAACTTTATAAAcaaattctatttttccttgCTTGGTTGTAA
GACTAATATGACATGATGAAATGGCTGCACTTATTGCACCAAGACCAAAT
TCGCATCCCTTTCAAGAAAGGCAGCTATCACTCAAGGAACCAATAAAGAT
TGGAAGAGCAGTTGCAAAGGCCAAAGCAACACAAAATAATGGCATCTTCG
ATTGTCGTGTTCTTTCCCGAAACCATGCTATGCTCTGGTATGAAAATGGA
AAGGTAAGGCACCCTTATCTTGATGATGATGCAAGAATTTAAGGAAATCC
AGAGTAACCGATAGCCCTTGAAAACtcattgaaaaatttgtttttaattc
aaCCTCCCAAACTNGTAGCCCTTGAAAACTcattaaaaatttgtttttaa
ttcaaCCTCCCATACTGTACTCCATGCCTTAATTTGAAGAAGGAAACAAT
CTCTAAATATTGTGTAGTTTTCCAGGAATTTGGAAGGTAATGCAGGAGTA
AATTGGACCATGTAAAATCACATtttgaaaaagcttttaaatCAATCTTG
TGCTTTGTTTTTCATAGTTCTTCCTCCAAGATACAAAAAGCAGCAATGGA
ACATTTGTCAATGGCGTTCGATTGAGCCGTGGGGCTGAGGAAAGTGAGCC
CTGTGAAATCAAGTCTGGTGATATTTTACAATTCGGTGTTGAAGttgttg
aaaatacaaaaaatggtATGTCTACACTTTGAAACAACACATTTATGTTA
TGCTCAATATTGATCTCATGTCCTGGTAACAACTCTGATAGGAGACCTAG
TCTATTGTAATTGAATATTATTCATTGTTAATCAGCTTTCCTAAAATTTC
AACATAATGTATTCCTGTTACAAAATTCAGTTTATAGACAGGTATGAATT
TGAAAGCATATTAGTATTATTTACTGCTCCATAACGATTTCTTATCAATG
TTCATTTTCACCATAGATCATAGCATTGCATTTAGATCTctatttcttta
attttagtGACACACGGATGCATCATAGGGCTTGCAACGCTTTTTCATGA
AGATGGAACTGAAGCAACTGGGTACACTTTTGAAGTTTTGATAAAGTCTT
TTTGCTAATGTTACTTGCCGAAATATCGTtgtaaatttataaaaaaattc
ctaTAAACTGTTTTATTGActgttatatttttttgaatgaaaaaataaag
acaCTATATCAAGAATCGACCTTCTCCGGCAAAAGCAGAATCTTTATTAT
ACTATGCTTgaacattgaatttttttttctttattcaggGCAAATGAGGA
ACCCCAAAGTGTACTATCCTTGGCCTCTGTAAGTATAAAGATATTGGCAA
GTATCATGATCATTTTCAGGGAAATCTTGTCATAAGCACTGCAAAATCTT
ATTTTATAGAATTAATTGAAGTTCTCTTTATTTTTAGGGTGATAAACCTA
TCCAACCAAAAGAACTGTGGCAATTATCCCAGTTTCTTCAGGTAATCTTG
TTGTCTGAGTAAAGTTTTCTTCACATAATTTCTTTGCTTCTTAATTTTCA
TTGAACACTTGTATAACAAAACAccatttcaaaaacaaaattttacacgg
ttataaaattttttgaatttggtgTTGGTGAGAGTGCTTCAAGTCCTCTT
TACTTGGTGGATTGACATTTGTTTATAACATACAATCAGTAAATTAATTT
TGAACATTCTTTTAATCGTAAGattatttaatattttatttatttctagg
cAAACTTGAAAAAGGCATTTAAGAGGTCGAAATATCGTTTCAAAAAAAtg
tgttatgttttattttgatttggtcACAAGGCTCTTTCTTTATGTTTGAC
TTATTTATTTCTAGGATGCCTTACATCGTGAGCAGATGCTTGAAAACAAA
CTAGCAACTTTGCAAAGAATGATTTCCAATTCTCATGCAGCATCAGACGA
CACATTCCAGGTTAACTAATTTCTACAGTTTTTGAGATACTTTCCCATTC
CACCATTATTACGCAGTGAAATCCTTAGCTTTTTTGTGGCTGTTATACAG
GGCGTTCTAGTATCATTTGGTGTCCTCAACAGTGGTTATTACGACATTAT
TATGACAgaacctttttgttttgtttggttgCTTCTGTAAtatacaataa
attttgattcttcttgaaacttctttttcatttgtaGGGCTTCATACAAG
AGGATAAAGTCTTATCAAGGCTGGAAACTCTGGAGAATCAATTGGAACTC
GTCTCACAGGTACGAAGGTTTTGGTATCAAGAATAAACTACAACACAATA
AATCGTTTCAATAATATCATTATAGAAATGGACGTTTAATATGGAGCTTA
ATTAACCCTTTATGTGAACAGTTTAACTTTATCTTGTCGACTTTTCAGGA
ATTGCCAGAGGATGAGCCTCAAACACAACTCATGGCATATCAAGATGAAA
GACTTGAATACGAATCAGCTGCTAAGGTTTGTATTTGTCTCTCACTTTCT
TCTACAGAAGATGTcttgaattgtttttacttgttTTTGTTTGTGATTAT
AAACGTCTTAAACGTcttaagaaattattttttttaaattttttaattga
gTTCTTCTggttaaaaattgaatattcttatagatgGTAATAGATCTTAT
ATAATTCTTATGGACAAATTTTAATATATCAAGTTGAAATGTAAACTTTT
CAGGAAACGCTGCAGAAAATCCTACAAGAGAAGATAGAAGTACTACAGAA
ATGCTCTGATCTTGAGGTAAAGTCATAATTGTCGGAAGTCAGTCAGTGTA
TTAATTACCTGTTTCTGAGATTCCATCAAGTTATCGTTGCTACCTTTTGT
ATATCTTTAATACAAGTTGGGAAAAGATTCACTTCAAAAATTTATAACTT
CGAATATTTTAACAGTGTTTGGTTAACAACCAACACTAagcatttaaata
tttttgccaGCCTTATattgaatacaattttttcttcaGCGACTTTTGAG
TAACACAGAGGACGAATGCACATTTTTACGAAACACttgggaaaaatcaa
aagaagaatTAGGGACGTTAATGGAAAGACACACACAGGTTTTatgtttt
tctcaaatttcatatCTTCAAATTTCGTATCTTCAAATGtcaTATCTTCA
AATGTCAATTGGAATtctaacttttaatttttttgactttagtAGAATTG
GAATAGAATTGGAATAGAATTTAACCCCTCCTAttaattttccttttcat
ttttctcctccaAAAGCAATGAAACTGTGAATCGGTTTTCACCATAAAGT
TTGAAAGCTTTCTGAGTGACCATCTAAAAATTTATTGTCTTTTCACTGCA
GCTAATGGACGAGTTGAAACAAGTCAAAGAGGATATGACCTCAGCTGAAC
AAAAACATGAAGCTACCCAACAACAGGTCTGTTTTGCATTCATCCAAGCG
TCTATCAGTTTCAGAAAATTGCTCTGTATAAATTTATTTGTTCACCAAAA
GTCAATAATAATAGCCCTAACTACCTTCAGCAGTCCAATGCTTCCTGGAC
CAGATAAAATATGAAGGATAATCTAATCTTGAAAATAACCTCCATACCTT
CTGAAAACAACCCCTTGTTTATATTTCCTATCTTGTAACCAGCATAAGTA
ATCAATCCTATCAATATCTTTCATCTCAATATCTTTCATAGACGATATCA
GAAAAGAAAGAACTTAAAGGTCAATTAGAAGATGCAGAAAAACGTGGAAG
CTCTTTAGCTGTAGAGGTAATTGGAACCCAAATGATTCTTAGTAGGTCAG
GTTCTAAGGTGTCACAAGTATAGTGTTCCAATACCTTCACTCGAGCGTtg
tatgaaattttgagtctctAATTAATGGTTTTTATCACTATTTTTCTATC
CTATGGGCATCAATCACTGTTGCAGGGTCTATTCAGAGTCAGctctgttt
tactttattcaaTTACTCTTAACCTTCCTCTAGTATTCTAACAAGTTCAt
gtcctttttggacctaccttaaggtagtgtcctataaattaacccgtgtt
cgttagttagttcgttagtacgttagttaccaacttttctcgagattggc
tcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttcaacttatttaatt
gtttctttacagaaaaatgttctttatgatgatgcccaaaacttagcatt
gtttgatttccaaaaaaatcatcctttgaatcaggaactccttaaaaatc
gccggaacaggcgaaaaccattttttcaacttatactcgacagatatact
ttcaccgttaaacatcgatgcgtttcttaattgctttctccgttccaata
gatatataaatcgaaatttaaaattatacattacttccattaaattctaa
ttattcgttttataaataggtaggtccattaaagtattacttgttatTTA
TATAAATGACAAAcccattgaaaaaagaaattgcacTTCTTCACTTCAGG
TGGAATCACTGCAAGCTGAATGTGATTTTACAAAGCAACAGCTACAAGCC
ATGAAAGGTATATTTCATCACATTGTGTTTGAAAATCTCTACATACAAAT
TGACTACAAAGTTAAGGAACGTTGCCTTTTAACCTAGTCCAGTACCTCTG
GGAATATTACTTAGTGCTTTTAAACAAGGATAAAGACCATTGTTTTTGCT
CTGTAGTATTTTTTGTAATAGTTGCTAGTAAGTGTTTATGGAAATACGAA
AACAATCAATCACGataaccaaatattttaatatcATTTTTTCACCAGAA
CGTCTGGAGACAAAGcagaaggaagaagaagaaggttTGTGTATTTCAAT
TTCTCCTTGCATTAAAGGATTCTAATCATTAGCTTAGCTCAAAAGGTTAG
ATGTGCCCATCTAAAATACCAGACACAGCAACCTTTTGCCAACCTTTATG
CTGTCAGTCTCTGCATCATCGAGTTTGAGTAGACCTCTCCTCTACTAGTA
TATAGTTCTCCTCCGTAATGTATTTTATAATTATGTATTACGTTGGTCTT
GTCCTTTGTGAATTTAAATGTTTTACAAGTGCGATTATTGAACTGAATGT
ATGCTGCAAGGACTGTCGAGTTGAAGTGACATGTTTGAGTGTTTTAGTAA
TTATAAGCTTTCCATGTCTATGCTAACTTACTTGCATATTCTGAAAAGTG
TCTGTTTCATTTTCAGTGTGCTTGTTTaggttttttctttttggttaatg
attttgtttttgtaggttttaaagggacattaaagtagtaaaatgtaaac
attgcgcgaaccacgtgtcatcaaagagaacaattaaaatcacgtgtcca
aaacaaacttgtaaaacaattgaacaatcaaaattagccatatttagttt
gattttttattttgacatgtgacatttgttttgattttgtattcgCTGCa
tatacagtttgtttacaaatttcgcaagtactgttatgtccctttaaagt
ttGTTTGTTCTTAGACGTAGTTTATTAGATTTTAACATTTTATTCTTGCA
CAGTAACATTGTAGTATTTTATCGCTTAGCAATTCACCATTTTGTTATAA
CATAATTGAATTCAGTCCGCTTATGACAGCAAGAGGAAGATTCAAACCGC
ATCGAGACTGCATGAAATAGATTTTCTTCACAATATACTTCTAGAGGCTC
AGATATAAGACAGATGACATCTATGGAGAGTTTGTTTTCCCAGTTTATGG
AGATTCATTCCAAACgacaattcaaaaaattttgaagaattcgATAGTTG
TTGAATCAAGTTGTTGAGAGACAGGCATACATACTTTAAATAGGGATATC
GAAGTGATGGACCATTTGAGCAATTGGAGAAAGCCAAGAATGTTAGCAGA
CCTTGAGGTGAGATAGCTGAACAGTTTGCAGAGTTACCCTTAAAAAAGGC
CAGCAGTGCAACATACCAAGACAATCTACTAGAAAGGATGGCAAACAAGT
CATCAAGTCATTCGAGACAAATCAGTTTCTAGTGAGAAAGCCGGAAAGAG
AGCAAGACTGGAAGTTTTATCCGCAAAAACTGAATTATATGTCCAAAGTA
TTCCAGCTATGAAGGCTCACCATCAAATGAAATTAAATCTCAAGTCAAGT
CTCAATAGATGATAGAAGTTTACGAAAACATCGAgcaagaaaatgatttt
taacCAGAATTTGAAAAGATCCCAGAATTCACAATTAGTGGCTGGATACG
TTGATACTTCTTATCAACTTCCAGAATTACTGAAAAACATTGTCaagaat
atttatttatttttcttagaaaCTGAAAAGCATGATCTTCCTTTTGCATC
AGGTACATCATTAACATTATTTGCAAATTATAATTTGTATTTACACTTTT
TAGCATTAGGGTATTATTGTGCTCTATAGATATGCTTATTACGTGTTTTT
GTAATAAATGGTTTGAGAATCAGCATGCTTGTGTAATTTTAAACAAATGT
TTTACGAGTGTAATGCTCACCAAAAAAAGGCTAatattttattcaatatt
ttaatttttgctcgTTAGGTACTGTTTTGGAAATTatatgtatttttgaa
aatggcaTTTCACAAGTCAATTATTAATTTTGTGCGATCTGGTTTTATCT
CGTCTTTATGCAAAGCTATGTCAAAACATAAACTTGTTTCTTAACCTCGT
GTTTATTATGGCTATTATTTAAACTCATTCATTTGTACTTGTATTAGACC
ATGCAACTTTGGAAAAAGATGTCAAGAATAAAACAGCTTTGATCCGATCT
TTAAAAGGTAAGTGTTGATagtttccataattcgaacaacAAGGGGTGTG
GGACCAATAAGCGTTCGAGTTTCGGAGAGTGTAAAAGATGTAAACTTGTG
AAACGGAATAGCTTTCGAATCTCATAGGATCGAAAAAAACTTTCGCCATT
GTATGGAGACGTCCTCAGTGATTTTAATTTCGGACTGGAGAGAGAACTAC
CTGCCCCTCCAAGACTTCAACAACCTTAGTTGATCAATTTNCTTTCGAAT
CTCATAGGATCTCATAGGATCTCATAAGATTTTAATTTCGGACTGGAGAG
AGAACTGCCTGCCCCTCCAAGACTTCAACAACCTTAGTTGATCAATTTAT
ATCAGATAATACATTTTTGTACCGATTCTTTACTGGAATTCGGAAATTTT
CGGAGCTAAACATACACAATATCTTCTAACTTTCTCTCTTAGAACAAATA
GCAGAAATGCAAGCAAAATATGAAATGGAACAACTCAATAAGTCAACAGG
TAATTGTTTCTTGGCCTTTCTTACTATCTTGATGTCGTAAGAATGGTATA
GGAAGTAATCATTTTATCCTACTTATCAAGCTAGCAATTAGACAATATAA
AAATTCTGAATGCATGGCAAAAGGTTCTTTAAAAGTCTCTCTATTGGGAC
TTTGTTTTGACTTCCAATAGAATCGAGTTTGCTTTACATTTTCTttaatt
gttgtttttctttaatttccattttgaatttgaagctCTCGTCATCTTTC
AAATAGGAGAAGAgacaaaaaatgaaatcttATTGCTAAattctgatttt
ctttttttgttttccgCCATCAGCAGATGACAAGAATGATGATTTCAACG
AACATTTAGAGATCAGCTGCACACAAATCAAAGAGCTAGACGGTNTAGAC
GACAAGAATGATGATTTCAACGAACATTTAGAGATCAGCTGCACACAAAT
CAAAGAGCTAGAAGGTGAGGAAGCAGCTTCCAGAAGAATTTCTTAATGAA
CGAAAACTTATGATCAAcaaaaaacattggaaaatatCATAGTTTCTTTT
CATTGGTGGTCACTGATAGTTTGAAAGGATTTCTAGAAGACTCGTTGAAG
TTTATTTATTGAAAAACCCTTTAAAAGCTTTTGTAAATAACAATAAGGTC
TCAGAAAAGACTTATGGTGGCCTTTATTGGTTATGATTGTAAAGGTATCT
ATGAGAGTCAAAGGTGTAATTGATAAATATGCTCTACATGAAGATGCTAT
TTTGTTCGCTCAGAAACTCCCCAACTTCTTCACATTTCTTTTCTTGTGTA
GGTGTTCTTCAGTCGGTTGCCGTTACGTTGAATACATGGTCTGATGGGTT
GATGGCAGGTATGTGATATCGTTTGCTAGCATTTAAAGCCTGCTGAATGG
AAAACGAAACGAAATAGCTAGAACAGCAACCTCGAAGTTATCATAACTAT
TTACATAAATGTAACTGTGTCTGTAACTTATATATTACACATATACTCAG
GCGAGTGTTTGGGGAAAATGATCCTGTGTGTTAATGGAAAAGACCTTATG
GTGTTCCTGTATATTCACCTCACATTGAAAATATCCAAAACTTTGTGTTC
ATTTTTAGGTGTGGAAACCAGTACATCATTTCATTACAGCGAAATCCAAA
CCacaacaaatcaaaacaagGAAGGTATCAAGGACAATAATTGTTTCTCT
TCCATTTGAAGAATTGTTAGGATATTAGTCCATGTGCATTTTGtcgggtc
aagctggagtttttacaagttctttgatgcCTCTGTTGGtcgcgtcatcc
ctattgtttaaaaataaccaatcagttaagcatcttgtaaaaactccagc
tcatcccattttgtcaatgaaaatcatttttgataatTCATTTTAATATA
AAAGGACAAGATCAGTTTTACAGGAacattttatttcttttgtttagacT
GTATTGTCAATCAACAAAAAGCCATTATGGCGTGCTCGGAATTCCTTAAT
AATGTAAAGAGTGagttataatttcttaggtaTCATATAATTTTATAAGT
TTGTGTGATTTCTTTCGCGAGGGGAAAGAACATGTATGCGAGTATTTACT
CCATTtggttttgattatttttctttactttctgTCTTCAATAGAATTGT
TGGGATAAGTTTATTAATGAAAGTCTACAACTAAAGTCGGTGGTGACCCG
ACTCGAAGGCTTATCTTTTGATGTctatctacctgaaggtaggAGAAGGC
GCctcagattttttttctgtctGCGGACGCAGACCTGAATTAGCAGTCAc
agacctgatttagcggccgaagacctggatTAAAAACCGAAGACTTGATG
CAGCGGTCGAATACCTTTTTTAACGACCGAAGACCTGGATAAAATGAATT
GTGTAAATTtgttataaatcttttttataaattcaatcaagatttttata
TGGTTTCAATGGGAAATAGTATCGAaaacaaataaagttaaaagatttta
aactaaaaagaaTGAATATTAATGCCAATAACTCGTCTCGAACTACCCAA
CTTTCGTCTTGGATACCACTGCACTAACCACTGGACCATCGCAACTGGTG
CTTTACCGAGTGGTTCAAGCTAGTTTAACTGACCCTAACTATTCGGCTGG
TGACTTACTAAATCCGGTCTTCGGCCGTTGATTCAGATCTTCGGCCGTtg
attcaggtcttcggccgttgatTCAGGTCTTCGACCGCTAAAATTAGGTC
TGCGTCCGCTGACGGAAAAAACGTTTGCGAGGGAGCCcttctttctccct
ggattccTCCACTCACCCTGATACAAAATCAATGGAATAAGCATCACAAC
CCTCAATACTTTTTGCTTTTCGTAACCGATTTAATAaatcatattttctt
tttcagaacaTTTCGAAGACGTTATCGCTAGAGCACCAATAGGTGaaata
ttgttttaattttcaataactcTGTAAAGCTTTTAATATGATGTTAGTGT
GATAGCAGTATAACCGGACACGTGGAATATTGAATCTAAACTAAAGTCTA
CATATAAACACGGCCTAACTATACAAATCAAAAGAGTGTGTAAAATAAGG
ACCGTATGATAATAAAGATATCACAAGATTGTTTATCCTTGTCAAAATAT
TGAAGCCATTGTATTAATTATATTGATTATTGATTAACAACTTTTCCCCA
GTTTTAATATTGTATTCTTTTCCCTCTTTTTACAGAACGAGAGCTCAGTC
ACAATTCAACCGATGAATCGATTAAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006277XLOC_006277Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011209-exon-sc0000122-1491911889:451276..451528TCONS_00011209-exon-sc0000122-1491911889:451276..451528Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:451276..451528TCONS_00011209-exon-sc0000122-1510915933:451276..451528Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:451276..451528TCONS_00011209-exon-sc0000122-1575043694:451276..451528Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:451843..451990TCONS_00011209-exon-sc0000122-1491911889:451843..451990Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:451843..451990TCONS_00011209-exon-sc0000122-1510915933:451843..451990Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:451843..451990TCONS_00011209-exon-sc0000122-1575043694:451843..451990Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:452283..452346TCONS_00011209-exon-sc0000122-1491911889:452283..452346Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:452283..452346TCONS_00011209-exon-sc0000122-1510915933:452283..452346Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:452283..452346TCONS_00011209-exon-sc0000122-1575043694:452283..452346Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:452564..452603TCONS_00011209-exon-sc0000122-1491911889:452564..452603Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:452564..452603TCONS_00011209-exon-sc0000122-1510915933:452564..452603Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:452564..452603TCONS_00011209-exon-sc0000122-1575043694:452564..452603Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:452713..452766TCONS_00011209-exon-sc0000122-1491911889:452713..452766Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:452713..452766TCONS_00011209-exon-sc0000122-1510915933:452713..452766Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:452713..452766TCONS_00011209-exon-sc0000122-1575043694:452713..452766Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:453140..453235TCONS_00011209-exon-sc0000122-1491911889:453140..453235Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:453140..453235TCONS_00011209-exon-sc0000122-1510915933:453140..453235Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:453140..453235TCONS_00011209-exon-sc0000122-1575043694:453140..453235Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:453463..453534TCONS_00011209-exon-sc0000122-1491911889:453463..453534Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:453463..453534TCONS_00011209-exon-sc0000122-1510915933:453463..453534Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:453463..453534TCONS_00011209-exon-sc0000122-1575043694:453463..453534Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:453674..453751TCONS_00011209-exon-sc0000122-1491911889:453674..453751Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:453674..453751TCONS_00011209-exon-sc0000122-1510915933:453674..453751Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:453674..453751TCONS_00011209-exon-sc0000122-1575043694:453674..453751Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:453979..454041TCONS_00011209-exon-sc0000122-1491911889:453979..454041Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:453979..454041TCONS_00011209-exon-sc0000122-1510915933:453979..454041Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:453979..454041TCONS_00011209-exon-sc0000122-1575043694:453979..454041Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:454265..454363TCONS_00011209-exon-sc0000122-1491911889:454265..454363Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:454265..454363TCONS_00011209-exon-sc0000122-1510915933:454265..454363Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:454265..454363TCONS_00011209-exon-sc0000122-1575043694:454265..454363Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:454627..454701TCONS_00011209-exon-sc0000122-1491911889:454627..454701Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:454627..454701TCONS_00011209-exon-sc0000122-1510915933:454627..454701Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:454627..454701TCONS_00011209-exon-sc0000122-1575043694:454627..454701Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:454967..455041TCONS_00011209-exon-sc0000122-1491911889:454967..455041Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:454967..455041TCONS_00011209-exon-sc0000122-1510915933:454967..455041Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:454967..455041TCONS_00011209-exon-sc0000122-1575043694:454967..455041Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:456475..456532TCONS_00011209-exon-sc0000122-1491911889:456475..456532Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:456475..456532TCONS_00011209-exon-sc0000122-1510915933:456475..456532Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:456475..456532TCONS_00011209-exon-sc0000122-1575043694:456475..456532Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:456774..456809TCONS_00011209-exon-sc0000122-1491911889:456774..456809Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:456774..456809TCONS_00011209-exon-sc0000122-1510915933:456774..456809Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:456774..456809TCONS_00011209-exon-sc0000122-1575043694:456774..456809Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:458723..458782TCONS_00011209-exon-sc0000122-1491911889:458723..458782Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:458723..458782TCONS_00011209-exon-sc0000122-1510915933:458723..458782Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:458723..458782TCONS_00011209-exon-sc0000122-1575043694:458723..458782Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:459218..459274TCONS_00011209-exon-sc0000122-1491911889:459218..459274Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:459218..459274TCONS_00011209-exon-sc0000122-1510915933:459218..459274Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:459218..459274TCONS_00011209-exon-sc0000122-1575043694:459218..459274Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:459599..459667TCONS_00011209-exon-sc0000122-1491911889:459599..459667Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:459599..459667TCONS_00011209-exon-sc0000122-1510915933:459599..459667Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:459599..459667TCONS_00011209-exon-sc0000122-1575043694:459599..459667Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:460077..460133TCONS_00011209-exon-sc0000122-1491911889:460077..460133Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:460077..460133TCONS_00011209-exon-sc0000122-1510915933:460077..460133Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:460077..460133TCONS_00011209-exon-sc0000122-1575043694:460077..460133Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:460384..460449TCONS_00011209-exon-sc0000122-1491911889:460384..460449Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:460384..460449TCONS_00011209-exon-sc0000122-1510915933:460384..460449Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:460384..460449TCONS_00011209-exon-sc0000122-1575043694:460384..460449Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:460723..460785TCONS_00011209-exon-sc0000122-1491911889:460723..460785Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:460723..460785TCONS_00011209-exon-sc0000122-1510915933:460723..460785Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:460723..460785TCONS_00011209-exon-sc0000122-1575043694:460723..460785Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:461682..461717TCONS_00011209-exon-sc0000122-1491911889:461682..461717Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:461682..461717TCONS_00011209-exon-sc0000122-1510915933:461682..461717Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:461682..461717TCONS_00011209-exon-sc0000122-1575043694:461682..461717Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1491911889:462011..462054TCONS_00011209-exon-sc0000122-1491911889:462011..462054Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1510915933:462011..462054TCONS_00011209-exon-sc0000122-1510915933:462011..462054Clytia hemisphaericaexon
TCONS_00011209-exon-sc0000122-1575043694:462011..462054TCONS_00011209-exon-sc0000122-1575043694:462011..462054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:451276..462054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.09903e-06	1.08089e-05	2.40528e-08	4.15956e-08	0	0	0	0	0	0	0	0	0	0	0	3.60794e-06	0	0	0	0	0	3.97863e-06	0	3.75874e-07	0	0	0.000317015	0	0	9.29591e-08
Blast
[Close]
BLAST of TCONS_00011209 vs. Swiss-Prot (Human)
Match: SLMAP (Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 4.799e-122
Identity = 190/372 (51.08%), Postives = 271/372 (72.85%), Query Frame = 2 
Query:   77 ALIAPRPNSHPFQERQLSLKEPIKIGRAVAKAKATQNNGIFDCRVLSRNHAMLWYEN--GKFFLQDTKSSNGTFVNGVRLSRGAEESEPCEIKSGDILQFGVEVVENTKNVTHGCIIGLATLFHEDGTEATGANEE-----PQSVLSLASGDKPIQPKELWQLSQFLQDALHREQMLENKLATLQRMISNSHAASDDTFQGFIQEDKVLSRLETLENQLELVSQELPEDEPQTQLMAYQDERLEYESAAKETLQKILQEKIEVLQKCSDLERLLSNTEDECTFLRNTWEKSKEELGTLMERHTQLMDELKQVKEDMTSAEQKHEATQQQTISEKKELKGQLEDAEKRGSSLAVEVESLQAECDFTKQQLQAM 1171
            A+   RPNSHPFQER + L EPIKIGR+VA+ +  QNN  FDC+VLSRNHA++W+++  GKF+LQDTKSSNGTF+N  RLSRG+EES PCEI SGDI+QFGV+V ENT+ VTHGCI+    LF  DG EA   ++      P  V  +A+    +  +EL+QLSQ+LQ+ALHREQMLE KLATLQR+++ +  ASD ++Q  I ED++LSRLE + NQL+  S+   ED  + +L+A Q+++  YE+ AKE+L+++LQEKIEV++K S++ER LSNTEDECT L+   E+++EEL  L  ++   ++E+K + + +  AE K E  QQ+  +EKKEL+ ++++ E++   L  ++E+LQA+ DFT ++L A+
Sbjct:    6 AIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTAL 377
The following BLAST results are available for this feature:
BLAST of TCONS_00011209 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SLMAP4.799e-12251.08Sarcolemmal membrane-associated protein OS=Homo sa... [more]
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