TCONS_00011207 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011207
Unique NameTCONS_00011207
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1694

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011207 ID=TCONS_00011207|Name=TCONS_00011207|organism=Clytia hemisphaerica|type=transcript|length=1694bp
TTTTAGATATAACTTTATAAAcaaattctatttttccttgCTTGGTTGTA
AGACTAATATGACATGATGAAATGGCTGCACTTATTGCACCAAGACCAAA
TTCGCATCCCTTTCAAGAAAGGCAGCTATCACTCAAGGAACCAATAAAGA
TTGGAAGAGCAGTTGCAAAGGCCAAAGCAACACAAAATAATGGCATCTTC
GATTGTCGTGTTCTTTCCCGAAACCATGCTATGCTCTGGTATGAAAATGG
AAAGTTCTTCCTCCAAGATACAAAAAGCAGCAATGGAACATTTGTCAATG
GCGTTCGATTGAGCCGTGGGGCTGAGGAAAGTGAGCCCTGTGAAATCAAG
TCTGGTGATATTTTACAATTCGGTGTTGAAGttgttgaaaatacaaaaaa
tgtGACACACGGATGCATCATAGGGCTTGCAACGCTTTTTCATGAAGATG
GAACTGAAGCAACTGGgGCAAATGAGGAACCCCAAAGTGTACTATCCTTG
GCCTCTGGTGATAAACCTATCCAACCAAAAGAACTGTGGCAATTATCCCA
GTTTCTTCAGGATGCCTTACATCGTGAGCAGATGCTTGAAAACAAACTAG
CAACTTTGCAAAGAATGATTTCCAATTCTCATGCAGCATCAGACGACACA
TTCCAGGGCTTCATACAAGAGGATAAAGTCTTATCAAGGCTGGAAACTCT
GGAGAATCAATTGGAACTCGTCTCACAGGAATTGCCAGAGGATGAGCCTC
AAACACAACTCATGGCATATCAAGATGAAAGACTTGAATACGAATCAGCT
GCTAAGGAAACGCTGCAGAAAATCCTACAAGAGAAGATAGAAGTACTACA
GAAATGCTCTGATCTTGAGCGACTTTTGAGTAACACAGAGGACGAATGCA
CATTTTTACGAAACACttgggaaaaatcaaaagaagaatTAGGGACGTTA
ATGGAAAGACACACACAGCTAATGGACGAGTTGAAACAAGTCAAAGAGGA
TATGACCTCAGCTGAACAAAAACATGAAGCTACCCAACAACAGACGATAT
CAGAAAAGAAAGAACTTAAAGGTCAATTAGAAGATGCAGAAAAACGTGGA
AGCTCTTTAGCTGTAGAGGTGGAATCACTGCAAGCTGAATGTGATTTTAC
AAAGCAACAGCTACAAGCCATGAAAGAACGTCTGGAGACAAAGcagaagg
aagaagaagaagaaaCTGAAAAGCATGATCTTCCTTTTGCATCAGACCAT
GCAACTTTGGAAAAAGATGTCAAGAATAAAACAGCTTTGATCCGATCTTT
AAAAGAACAAATAGCAGAAATGCAAGCAAAATATGAAATGGAACAACTCA
ATAAGTCAACAGATGACAAGAATGATGATTTCAACGAACATTTAGAGATC
AGCTGCACACAAATCAAAGAGCTAGACGGTGTTCTTCAGTCGGTTGCCGT
TACGTTGAATACATGGTCTGATGGGTTGATGGCAGGTGTGGAAACCAGTA
CATCATTTCATTACAGCGAAATCCAAACCacaacaaatcaaaacaagGAA
GacTGTATTGTCAATCAACAAAAAGCCATTATGGCGTGCTCGGAATTCCT
TAATAATGTAAAGAaacaTTTCGAAGACGTTATCGCTAGAGCACCAATAG
AACGAGAGCTCAGTCACAATTCAACCGATGAATCGATTAAAGGT
Run BLAST on NCBI

transcript from alignment at sc0000122:451275..462054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011207 ID=TCONS_00011207|Name=TCONS_00011207|organism=Clytia hemisphaerica|type=transcript|length=10780bp|location=Sequence derived from alignment at sc0000122:451275..462054+ (Clytia hemisphaerica)
TTTTAGATATAACTTTATAAAcaaattctatttttccttgCTTGGTTGTA
AGACTAATATGACATGATGAAATGGCTGCACTTATTGCACCAAGACCAAA
TTCGCATCCCTTTCAAGAAAGGCAGCTATCACTCAAGGAACCAATAAAGA
TTGGAAGAGCAGTTGCAAAGGCCAAAGCAACACAAAATAATGGCATCTTC
GATTGTCGTGTTCTTTCCCGAAACCATGCTATGCTCTGGTATGAAAATGG
AAAGGTAAGGCACCCTTATCTTGATGATGATGCAAGAATTTAAGGAAATC
CAGAGTAACCGATAGCCCTTGAAAACtcattgaaaaatttgtttttaatt
caaCCTCCCAAACTNGTAGCCCTTGAAAACTcattaaaaatttgttttta
attcaaCCTCCCATACTGTACTCCATGCCTTAATTTGAAGAAGGAAACAA
TCTCTAAATATTGTGTAGTTTTCCAGGAATTTGGAAGGTAATGCAGGAGT
AAATTGGACCATGTAAAATCACATtttgaaaaagcttttaaatCAATCTT
GTGCTTTGTTTTTCATAGTTCTTCCTCCAAGATACAAAAAGCAGCAATGG
AACATTTGTCAATGGCGTTCGATTGAGCCGTGGGGCTGAGGAAAGTGAGC
CCTGTGAAATCAAGTCTGGTGATATTTTACAATTCGGTGTTGAAGttgtt
gaaaatacaaaaaatggtATGTCTACACTTTGAAACAACACATTTATGTT
ATGCTCAATATTGATCTCATGTCCTGGTAACAACTCTGATAGGAGACCTA
GTCTATTGTAATTGAATATTATTCATTGTTAATCAGCTTTCCTAAAATTT
CAACATAATGTATTCCTGTTACAAAATTCAGTTTATAGACAGGTATGAAT
TTGAAAGCATATTAGTATTATTTACTGCTCCATAACGATTTCTTATCAAT
GTTCATTTTCACCATAGATCATAGCATTGCATTTAGATCTctatttcttt
aattttagtGACACACGGATGCATCATAGGGCTTGCAACGCTTTTTCATG
AAGATGGAACTGAAGCAACTGGGTACACTTTTGAAGTTTTGATAAAGTCT
TTTTGCTAATGTTACTTGCCGAAATATCGTtgtaaatttataaaaaaatt
cctaTAAACTGTTTTATTGActgttatatttttttgaatgaaaaaataaa
gacaCTATATCAAGAATCGACCTTCTCCGGCAAAAGCAGAATCTTTATTA
TACTATGCTTgaacattgaatttttttttctttattcaggGCAAATGAGG
AACCCCAAAGTGTACTATCCTTGGCCTCTGTAAGTATAAAGATATTGGCA
AGTATCATGATCATTTTCAGGGAAATCTTGTCATAAGCACTGCAAAATCT
TATTTTATAGAATTAATTGAAGTTCTCTTTATTTTTAGGGTGATAAACCT
ATCCAACCAAAAGAACTGTGGCAATTATCCCAGTTTCTTCAGGTAATCTT
GTTGTCTGAGTAAAGTTTTCTTCACATAATTTCTTTGCTTCTTAATTTTC
ATTGAACACTTGTATAACAAAACAccatttcaaaaacaaaattttacacg
gttataaaattttttgaatttggtgTTGGTGAGAGTGCTTCAAGTCCTCT
TTACTTGGTGGATTGACATTTGTTTATAACATACAATCAGTAAATTAATT
TTGAACATTCTTTTAATCGTAAGattatttaatattttatttatttctag
gcAAACTTGAAAAAGGCATTTAAGAGGTCGAAATATCGTTTCAAAAAAAt
gtgttatgttttattttgatttggtcACAAGGCTCTTTCTTTATGTTTGA
CTTATTTATTTCTAGGATGCCTTACATCGTGAGCAGATGCTTGAAAACAA
ACTAGCAACTTTGCAAAGAATGATTTCCAATTCTCATGCAGCATCAGACG
ACACATTCCAGGTTAACTAATTTCTACAGTTTTTGAGATACTTTCCCATT
CCACCATTATTACGCAGTGAAATCCTTAGCTTTTTTGTGGCTGTTATACA
GGGCGTTCTAGTATCATTTGGTGTCCTCAACAGTGGTTATTACGACATTA
TTATGACAgaacctttttgttttgtttggttgCTTCTGTAAtatacaata
aattttgattcttcttgaaacttctttttcatttgtaGGGCTTCATACAA
GAGGATAAAGTCTTATCAAGGCTGGAAACTCTGGAGAATCAATTGGAACT
CGTCTCACAGGTACGAAGGTTTTGGTATCAAGAATAAACTACAACACAAT
AAATCGTTTCAATAATATCATTATAGAAATGGACGTTTAATATGGAGCTT
AATTAACCCTTTATGTGAACAGTTTAACTTTATCTTGTCGACTTTTCAGG
AATTGCCAGAGGATGAGCCTCAAACACAACTCATGGCATATCAAGATGAA
AGACTTGAATACGAATCAGCTGCTAAGGTTTGTATTTGTCTCTCACTTTC
TTCTACAGAAGATGTcttgaattgtttttacttgttTTTGTTTGTGATTA
TAAACGTCTTAAACGTcttaagaaattattttttttaaattttttaattg
agTTCTTCTggttaaaaattgaatattcttatagatgGTAATAGATCTTA
TATAATTCTTATGGACAAATTTTAATATATCAAGTTGAAATGTAAACTTT
TCAGGAAACGCTGCAGAAAATCCTACAAGAGAAGATAGAAGTACTACAGA
AATGCTCTGATCTTGAGGTAAAGTCATAATTGTCGGAAGTCAGTCAGTGT
ATTAATTACCTGTTTCTGAGATTCCATCAAGTTATCGTTGCTACCTTTTG
TATATCTTTAATACAAGTTGGGAAAAGATTCACTTCAAAAATTTATAACT
TCGAATATTTTAACAGTGTTTGGTTAACAACCAACACTAagcatttaaat
atttttgccaGCCTTATattgaatacaattttttcttcaGCGACTTTTGA
GTAACACAGAGGACGAATGCACATTTTTACGAAACACttgggaaaaatca
aaagaagaatTAGGGACGTTAATGGAAAGACACACACAGGTTTTatgttt
ttctcaaatttcatatCTTCAAATTTCGTATCTTCAAATGtcaTATCTTC
AAATGTCAATTGGAATtctaacttttaatttttttgactttagtAGAATT
GGAATAGAATTGGAATAGAATTTAACCCCTCCTAttaattttccttttca
tttttctcctccaAAAGCAATGAAACTGTGAATCGGTTTTCACCATAAAG
TTTGAAAGCTTTCTGAGTGACCATCTAAAAATTTATTGTCTTTTCACTGC
AGCTAATGGACGAGTTGAAACAAGTCAAAGAGGATATGACCTCAGCTGAA
CAAAAACATGAAGCTACCCAACAACAGGTCTGTTTTGCATTCATCCAAGC
GTCTATCAGTTTCAGAAAATTGCTCTGTATAAATTTATTTGTTCACCAAA
AGTCAATAATAATAGCCCTAACTACCTTCAGCAGTCCAATGCTTCCTGGA
CCAGATAAAATATGAAGGATAATCTAATCTTGAAAATAACCTCCATACCT
TCTGAAAACAACCCCTTGTTTATATTTCCTATCTTGTAACCAGCATAAGT
AATCAATCCTATCAATATCTTTCATCTCAATATCTTTCATAGACGATATC
AGAAAAGAAAGAACTTAAAGGTCAATTAGAAGATGCAGAAAAACGTGGAA
GCTCTTTAGCTGTAGAGGTAATTGGAACCCAAATGATTCTTAGTAGGTCA
GGTTCTAAGGTGTCACAAGTATAGTGTTCCAATACCTTCACTCGAGCGTt
gtatgaaattttgagtctctAATTAATGGTTTTTATCACTATTTTTCTAT
CCTATGGGCATCAATCACTGTTGCAGGGTCTATTCAGAGTCAGctctgtt
ttactttattcaaTTACTCTTAACCTTCCTCTAGTATTCTAACAAGTTCA
tgtcctttttggacctaccttaaggtagtgtcctataaattaacccgtgt
tcgttagttagttcgttagtacgttagttaccaacttttctcgagattgg
ctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttcaacttatttaat
tgtttctttacagaaaaatgttctttatgatgatgcccaaaacttagcat
tgtttgatttccaaaaaaatcatcctttgaatcaggaactccttaaaaat
cgccggaacaggcgaaaaccattttttcaacttatactcgacagatatac
tttcaccgttaaacatcgatgcgtttcttaattgctttctccgttccaat
agatatataaatcgaaatttaaaattatacattacttccattaaattcta
attattcgttttataaataggtaggtccattaaagtattacttgttatTT
ATATAAATGACAAAcccattgaaaaaagaaattgcacTTCTTCACTTCAG
GTGGAATCACTGCAAGCTGAATGTGATTTTACAAAGCAACAGCTACAAGC
CATGAAAGGTATATTTCATCACATTGTGTTTGAAAATCTCTACATACAAA
TTGACTACAAAGTTAAGGAACGTTGCCTTTTAACCTAGTCCAGTACCTCT
GGGAATATTACTTAGTGCTTTTAAACAAGGATAAAGACCATTGTTTTTGC
TCTGTAGTATTTTTTGTAATAGTTGCTAGTAAGTGTTTATGGAAATACGA
AAACAATCAATCACGataaccaaatattttaatatcATTTTTTCACCAGA
ACGTCTGGAGACAAAGcagaaggaagaagaagaaggttTGTGTATTTCAA
TTTCTCCTTGCATTAAAGGATTCTAATCATTAGCTTAGCTCAAAAGGTTA
GATGTGCCCATCTAAAATACCAGACACAGCAACCTTTTGCCAACCTTTAT
GCTGTCAGTCTCTGCATCATCGAGTTTGAGTAGACCTCTCCTCTACTAGT
ATATAGTTCTCCTCCGTAATGTATTTTATAATTATGTATTACGTTGGTCT
TGTCCTTTGTGAATTTAAATGTTTTACAAGTGCGATTATTGAACTGAATG
TATGCTGCAAGGACTGTCGAGTTGAAGTGACATGTTTGAGTGTTTTAGTA
ATTATAAGCTTTCCATGTCTATGCTAACTTACTTGCATATTCTGAAAAGT
GTCTGTTTCATTTTCAGTGTGCTTGTTTaggttttttctttttggttaat
gattttgtttttgtaggttttaaagggacattaaagtagtaaaatgtaaa
cattgcgcgaaccacgtgtcatcaaagagaacaattaaaatcacgtgtcc
aaaacaaacttgtaaaacaattgaacaatcaaaattagccatatttagtt
tgattttttattttgacatgtgacatttgttttgattttgtattcgCTGC
atatacagtttgtttacaaatttcgcaagtactgttatgtccctttaaag
tttGTTTGTTCTTAGACGTAGTTTATTAGATTTTAACATTTTATTCTTGC
ACAGTAACATTGTAGTATTTTATCGCTTAGCAATTCACCATTTTGTTATA
ACATAATTGAATTCAGTCCGCTTATGACAGCAAGAGGAAGATTCAAACCG
CATCGAGACTGCATGAAATAGATTTTCTTCACAATATACTTCTAGAGGCT
CAGATATAAGACAGATGACATCTATGGAGAGTTTGTTTTCCCAGTTTATG
GAGATTCATTCCAAACgacaattcaaaaaattttgaagaattcgATAGTT
GTTGAATCAAGTTGTTGAGAGACAGGCATACATACTTTAAATAGGGATAT
CGAAGTGATGGACCATTTGAGCAATTGGAGAAAGCCAAGAATGTTAGCAG
ACCTTGAGGTGAGATAGCTGAACAGTTTGCAGAGTTACCCTTAAAAAAGG
CCAGCAGTGCAACATACCAAGACAATCTACTAGAAAGGATGGCAAACAAG
TCATCAAGTCATTCGAGACAAATCAGTTTCTAGTGAGAAAGCCGGAAAGA
GAGCAAGACTGGAAGTTTTATCCGCAAAAACTGAATTATATGTCCAAAGT
ATTCCAGCTATGAAGGCTCACCATCAAATGAAATTAAATCTCAAGTCAAG
TCTCAATAGATGATAGAAGTTTACGAAAACATCGAgcaagaaaatgattt
ttaacCAGAATTTGAAAAGATCCCAGAATTCACAATTAGTGGCTGGATAC
GTTGATACTTCTTATCAACTTCCAGAATTACTGAAAAACATTGTCaagaa
tatttatttatttttcttagaaaCTGAAAAGCATGATCTTCCTTTTGCAT
CAGGTACATCATTAACATTATTTGCAAATTATAATTTGTATTTACACTTT
TTAGCATTAGGGTATTATTGTGCTCTATAGATATGCTTATTACGTGTTTT
TGTAATAAATGGTTTGAGAATCAGCATGCTTGTGTAATTTTAAACAAATG
TTTTACGAGTGTAATGCTCACCAAAAAAAGGCTAatattttattcaatat
tttaatttttgctcgTTAGGTACTGTTTTGGAAATTatatgtatttttga
aaatggcaTTTCACAAGTCAATTATTAATTTTGTGCGATCTGGTTTTATC
TCGTCTTTATGCAAAGCTATGTCAAAACATAAACTTGTTTCTTAACCTCG
TGTTTATTATGGCTATTATTTAAACTCATTCATTTGTACTTGTATTAGAC
CATGCAACTTTGGAAAAAGATGTCAAGAATAAAACAGCTTTGATCCGATC
TTTAAAAGGTAAGTGTTGATagtttccataattcgaacaacAAGGGGTGT
GGGACCAATAAGCGTTCGAGTTTCGGAGAGTGTAAAAGATGTAAACTTGT
GAAACGGAATAGCTTTCGAATCTCATAGGATCGAAAAAAACTTTCGCCAT
TGTATGGAGACGTCCTCAGTGATTTTAATTTCGGACTGGAGAGAGAACTA
CCTGCCCCTCCAAGACTTCAACAACCTTAGTTGATCAATTTNCTTTCGAA
TCTCATAGGATCTCATAGGATCTCATAAGATTTTAATTTCGGACTGGAGA
GAGAACTGCCTGCCCCTCCAAGACTTCAACAACCTTAGTTGATCAATTTA
TATCAGATAATACATTTTTGTACCGATTCTTTACTGGAATTCGGAAATTT
TCGGAGCTAAACATACACAATATCTTCTAACTTTCTCTCTTAGAACAAAT
AGCAGAAATGCAAGCAAAATATGAAATGGAACAACTCAATAAGTCAACAG
GTAATTGTTTCTTGGCCTTTCTTACTATCTTGATGTCGTAAGAATGGTAT
AGGAAGTAATCATTTTATCCTACTTATCAAGCTAGCAATTAGACAATATA
AAAATTCTGAATGCATGGCAAAAGGTTCTTTAAAAGTCTCTCTATTGGGA
CTTTGTTTTGACTTCCAATAGAATCGAGTTTGCTTTACATTTTCTttaat
tgttgtttttctttaatttccattttgaatttgaagctCTCGTCATCTTT
CAAATAGGAGAAGAgacaaaaaatgaaatcttATTGCTAAattctgattt
tctttttttgttttccgCCATCAGCAGATGACAAGAATGATGATTTCAAC
GAACATTTAGAGATCAGCTGCACACAAATCAAAGAGCTAGACGGTNTAGA
CGACAAGAATGATGATTTCAACGAACATTTAGAGATCAGCTGCACACAAA
TCAAAGAGCTAGAAGGTGAGGAAGCAGCTTCCAGAAGAATTTCTTAATGA
ACGAAAACTTATGATCAAcaaaaaacattggaaaatatCATAGTTTCTTT
TCATTGGTGGTCACTGATAGTTTGAAAGGATTTCTAGAAGACTCGTTGAA
GTTTATTTATTGAAAAACCCTTTAAAAGCTTTTGTAAATAACAATAAGGT
CTCAGAAAAGACTTATGGTGGCCTTTATTGGTTATGATTGTAAAGGTATC
TATGAGAGTCAAAGGTGTAATTGATAAATATGCTCTACATGAAGATGCTA
TTTTGTTCGCTCAGAAACTCCCCAACTTCTTCACATTTCTTTTCTTGTGT
AGGTGTTCTTCAGTCGGTTGCCGTTACGTTGAATACATGGTCTGATGGGT
TGATGGCAGGTATGTGATATCGTTTGCTAGCATTTAAAGCCTGCTGAATG
GAAAACGAAACGAAATAGCTAGAACAGCAACCTCGAAGTTATCATAACTA
TTTACATAAATGTAACTGTGTCTGTAACTTATATATTACACATATACTCA
GGCGAGTGTTTGGGGAAAATGATCCTGTGTGTTAATGGAAAAGACCTTAT
GGTGTTCCTGTATATTCACCTCACATTGAAAATATCCAAAACTTTGTGTT
CATTTTTAGGTGTGGAAACCAGTACATCATTTCATTACAGCGAAATCCAA
ACCacaacaaatcaaaacaagGAAGGTATCAAGGACAATAATTGTTTCTC
TTCCATTTGAAGAATTGTTAGGATATTAGTCCATGTGCATTTTGtcgggt
caagctggagtttttacaagttctttgatgcCTCTGTTGGtcgcgtcatc
cctattgtttaaaaataaccaatcagttaagcatcttgtaaaaactccag
ctcatcccattttgtcaatgaaaatcatttttgataatTCATTTTAATAT
AAAAGGACAAGATCAGTTTTACAGGAacattttatttcttttgtttagac
TGTATTGTCAATCAACAAAAAGCCATTATGGCGTGCTCGGAATTCCTTAA
TAATGTAAAGAGTGagttataatttcttaggtaTCATATAATTTTATAAG
TTTGTGTGATTTCTTTCGCGAGGGGAAAGAACATGTATGCGAGTATTTAC
TCCATTtggttttgattatttttctttactttctgTCTTCAATAGAATTG
TTGGGATAAGTTTATTAATGAAAGTCTACAACTAAAGTCGGTGGTGACCC
GACTCGAAGGCTTATCTTTTGATGTctatctacctgaaggtaggAGAAGG
CGCctcagattttttttctgtctGCGGACGCAGACCTGAATTAGCAGTCA
cagacctgatttagcggccgaagacctggatTAAAAACCGAAGACTTGAT
GCAGCGGTCGAATACCTTTTTTAACGACCGAAGACCTGGATAAAATGAAT
TGTGTAAATTtgttataaatcttttttataaattcaatcaagatttttat
aTGGTTTCAATGGGAAATAGTATCGAaaacaaataaagttaaaagatttt
aaactaaaaagaaTGAATATTAATGCCAATAACTCGTCTCGAACTACCCA
ACTTTCGTCTTGGATACCACTGCACTAACCACTGGACCATCGCAACTGGT
GCTTTACCGAGTGGTTCAAGCTAGTTTAACTGACCCTAACTATTCGGCTG
GTGACTTACTAAATCCGGTCTTCGGCCGTTGATTCAGATCTTCGGCCGTt
gattcaggtcttcggccgttgatTCAGGTCTTCGACCGCTAAAATTAGGT
CTGCGTCCGCTGACGGAAAAAACGTTTGCGAGGGAGCCcttctttctccc
tggattccTCCACTCACCCTGATACAAAATCAATGGAATAAGCATCACAA
CCCTCAATACTTTTTGCTTTTCGTAACCGATTTAATAaatcatattttct
ttttcagaacaTTTCGAAGACGTTATCGCTAGAGCACCAATAGGTGaaat
attgttttaattttcaataactcTGTAAAGCTTTTAATATGATGTTAGTG
TGATAGCAGTATAACCGGACACGTGGAATATTGAATCTAAACTAAAGTCT
ACATATAAACACGGCCTAACTATACAAATCAAAAGAGTGTGTAAAATAAG
GACCGTATGATAATAAAGATATCACAAGATTGTTTATCCTTGTCAAAATA
TTGAAGCCATTGTATTAATTATATTGATTATTGATTAACAACTTTTCCCC
AGTTTTAATATTGTATTCTTTTCCCTCTTTTTACAGAACGAGAGCTCAGT
CACAATTCAACCGATGAATCGATTAAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006277XLOC_006277Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011207-exon-sc0000122-1491911889:451275..451528TCONS_00011207-exon-sc0000122-1491911889:451275..451528Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:451275..451528TCONS_00011207-exon-sc0000122-1510915933:451275..451528Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:451275..451528TCONS_00011207-exon-sc0000122-1575043694:451275..451528Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:451843..451990TCONS_00011207-exon-sc0000122-1491911889:451843..451990Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:451843..451990TCONS_00011207-exon-sc0000122-1510915933:451843..451990Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:451843..451990TCONS_00011207-exon-sc0000122-1575043694:451843..451990Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:452283..452346TCONS_00011207-exon-sc0000122-1491911889:452283..452346Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:452283..452346TCONS_00011207-exon-sc0000122-1510915933:452283..452346Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:452283..452346TCONS_00011207-exon-sc0000122-1575043694:452283..452346Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:452564..452603TCONS_00011207-exon-sc0000122-1491911889:452564..452603Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:452564..452603TCONS_00011207-exon-sc0000122-1510915933:452564..452603Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:452564..452603TCONS_00011207-exon-sc0000122-1575043694:452564..452603Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:452713..452766TCONS_00011207-exon-sc0000122-1491911889:452713..452766Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:452713..452766TCONS_00011207-exon-sc0000122-1510915933:452713..452766Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:452713..452766TCONS_00011207-exon-sc0000122-1575043694:452713..452766Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:453140..453235TCONS_00011207-exon-sc0000122-1491911889:453140..453235Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:453140..453235TCONS_00011207-exon-sc0000122-1510915933:453140..453235Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:453140..453235TCONS_00011207-exon-sc0000122-1575043694:453140..453235Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:453463..453534TCONS_00011207-exon-sc0000122-1491911889:453463..453534Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:453463..453534TCONS_00011207-exon-sc0000122-1510915933:453463..453534Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:453463..453534TCONS_00011207-exon-sc0000122-1575043694:453463..453534Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:453674..453751TCONS_00011207-exon-sc0000122-1491911889:453674..453751Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:453674..453751TCONS_00011207-exon-sc0000122-1510915933:453674..453751Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:453674..453751TCONS_00011207-exon-sc0000122-1575043694:453674..453751Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:453979..454041TCONS_00011207-exon-sc0000122-1491911889:453979..454041Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:453979..454041TCONS_00011207-exon-sc0000122-1510915933:453979..454041Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:453979..454041TCONS_00011207-exon-sc0000122-1575043694:453979..454041Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:454265..454363TCONS_00011207-exon-sc0000122-1491911889:454265..454363Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:454265..454363TCONS_00011207-exon-sc0000122-1510915933:454265..454363Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:454265..454363TCONS_00011207-exon-sc0000122-1575043694:454265..454363Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:454627..454701TCONS_00011207-exon-sc0000122-1491911889:454627..454701Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:454627..454701TCONS_00011207-exon-sc0000122-1510915933:454627..454701Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:454627..454701TCONS_00011207-exon-sc0000122-1575043694:454627..454701Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:454967..455041TCONS_00011207-exon-sc0000122-1491911889:454967..455041Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:454967..455041TCONS_00011207-exon-sc0000122-1510915933:454967..455041Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:454967..455041TCONS_00011207-exon-sc0000122-1575043694:454967..455041Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:456475..456532TCONS_00011207-exon-sc0000122-1491911889:456475..456532Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:456475..456532TCONS_00011207-exon-sc0000122-1510915933:456475..456532Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:456475..456532TCONS_00011207-exon-sc0000122-1575043694:456475..456532Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:456774..456809TCONS_00011207-exon-sc0000122-1491911889:456774..456809Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:456774..456809TCONS_00011207-exon-sc0000122-1510915933:456774..456809Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:456774..456809TCONS_00011207-exon-sc0000122-1575043694:456774..456809Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:458295..458327TCONS_00011207-exon-sc0000122-1491911889:458295..458327Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:458295..458327TCONS_00011207-exon-sc0000122-1510915933:458295..458327Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:458295..458327TCONS_00011207-exon-sc0000122-1575043694:458295..458327Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:458723..458782TCONS_00011207-exon-sc0000122-1491911889:458723..458782Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:458723..458782TCONS_00011207-exon-sc0000122-1510915933:458723..458782Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:458723..458782TCONS_00011207-exon-sc0000122-1575043694:458723..458782Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:459218..459274TCONS_00011207-exon-sc0000122-1491911889:459218..459274Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:459218..459274TCONS_00011207-exon-sc0000122-1510915933:459218..459274Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:459218..459274TCONS_00011207-exon-sc0000122-1575043694:459218..459274Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:459602..459667TCONS_00011207-exon-sc0000122-1491911889:459602..459667Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:459602..459667TCONS_00011207-exon-sc0000122-1510915933:459602..459667Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:459602..459667TCONS_00011207-exon-sc0000122-1575043694:459602..459667Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:460077..460133TCONS_00011207-exon-sc0000122-1491911889:460077..460133Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:460077..460133TCONS_00011207-exon-sc0000122-1510915933:460077..460133Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:460077..460133TCONS_00011207-exon-sc0000122-1575043694:460077..460133Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:460384..460449TCONS_00011207-exon-sc0000122-1491911889:460384..460449Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:460384..460449TCONS_00011207-exon-sc0000122-1510915933:460384..460449Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:460384..460449TCONS_00011207-exon-sc0000122-1575043694:460384..460449Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:460723..460785TCONS_00011207-exon-sc0000122-1491911889:460723..460785Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:460723..460785TCONS_00011207-exon-sc0000122-1510915933:460723..460785Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:460723..460785TCONS_00011207-exon-sc0000122-1575043694:460723..460785Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:461682..461717TCONS_00011207-exon-sc0000122-1491911889:461682..461717Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:461682..461717TCONS_00011207-exon-sc0000122-1510915933:461682..461717Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:461682..461717TCONS_00011207-exon-sc0000122-1575043694:461682..461717Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1491911889:462011..462054TCONS_00011207-exon-sc0000122-1491911889:462011..462054Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1510915933:462011..462054TCONS_00011207-exon-sc0000122-1510915933:462011..462054Clytia hemisphaericaexon
TCONS_00011207-exon-sc0000122-1575043694:462011..462054TCONS_00011207-exon-sc0000122-1575043694:462011..462054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:451275..462054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.8744	0.70692	6.00691	2.27848	0	0	0	0	0.0910626	4.45266	3.45247e-08	3.99374	0.00225218	0	5.66638e-05	0.00174297	1.80286	0.00123515	0.311882	0.000919874	2.4572	4.17098	6.49522	1.42495	0	0	6.69223	6.67602	4.15388	2.31035
Blast
[Close]
BLAST of TCONS_00011207 vs. Swiss-Prot (Human)
Match: SLMAP (Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 8.367e-122
Identity = 190/372 (51.08%), Postives = 271/372 (72.85%), Query Frame = 3 
Query:   78 ALIAPRPNSHPFQERQLSLKEPIKIGRAVAKAKATQNNGIFDCRVLSRNHAMLWYEN--GKFFLQDTKSSNGTFVNGVRLSRGAEESEPCEIKSGDILQFGVEVVENTKNVTHGCIIGLATLFHEDGTEATGANEE-----PQSVLSLASGDKPIQPKELWQLSQFLQDALHREQMLENKLATLQRMISNSHAASDDTFQGFIQEDKVLSRLETLENQLELVSQELPEDEPQTQLMAYQDERLEYESAAKETLQKILQEKIEVLQKCSDLERLLSNTEDECTFLRNTWEKSKEELGTLMERHTQLMDELKQVKEDMTSAEQKHEATQQQTISEKKELKGQLEDAEKRGSSLAVEVESLQAECDFTKQQLQAM 1172
            A+   RPNSHPFQER + L EPIKIGR+VA+ +  QNN  FDC+VLSRNHA++W+++  GKF+LQDTKSSNGTF+N  RLSRG+EES PCEI SGDI+QFGV+V ENT+ VTHGCI+    LF  DG EA   ++      P  V  +A+    +  +EL+QLSQ+LQ+ALHREQMLE KLATLQR+++ +  ASD ++Q  I ED++LSRLE + NQL+  S+   ED  + +L+A Q+++  YE+ AKE+L+++LQEKIEV++K S++ER LSNTEDECT L+   E+++EEL  L  ++   ++E+K + + +  AE K E  QQ+  +EKKEL+ ++++ E++   L  ++E+LQA+ DFT ++L A+
Sbjct:    6 AIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTAL 377
The following BLAST results are available for this feature:
BLAST of TCONS_00011207 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SLMAP8.367e-12251.08Sarcolemmal membrane-associated protein OS=Homo sa... [more]
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