TCONS_00011205 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011205
Unique Name	TCONS_00011205
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1767

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000122:451205..462054+

transcript sequence

>TCONS_00011205 ID=TCONS_00011205|Name=TCONS_00011205|organism=Clytia hemisphaerica|type=transcript|length=1767bp
ccatgtgctcgcacggtggcctgcgaacttgtatagcgttattattatta
ttattattatttaactCTCATTTTAGATATAACTTTATAAAcaaattcta
tttttccttgCTTGGTTGTAAGACTAATATGACATGATGAAATGGCTGCA
CTTATTGCACCAAGACCAAATTCGCATCCCTTTCAAGAAAGGCAGCTATC
ACTCAAGGAACCAATAAAGATTGGAAGAGCAGTTGCAAAGGCCAAAGCAA
CACAAAATAATGGCATCTTCGATTGTCGTGTTCTTTCCCGAAACCATGCT
ATGCTCTGGTATGAAAATGGAAAGTTCTTCCTCCAAGATACAAAAAGCAG
CAATGGAACATTTGTCAATGGCGTTCGATTGAGCCGTGGGGCTGAGGAAA
GTGAGCCCTGTGAAATCAAGTCTGGTGATATTTTACAATTCGGTGTTGAA
GttgttgaaaatacaaaaaatgtGACACACGGATGCATCATAGGGCTTGC
AACGCTTTTTCATGAAGATGGAACTGAAGCAACTGGgGCAAATGAGGAAC
CCCAAAGTGTACTATCCTTGGCCTCTGGTGATAAACCTATCCAACCAAAA
GAACTGTGGCAATTATCCCAGTTTCTTCAGGATGCCTTACATCGTGAGCA
GATGCTTGAAAACAAACTAGCAACTTTGCAAAGAATGATTTCCAATTCTC
ATGCAGCATCAGACGACACATTCCAGGGCTTCATACAAGAGGATAAAGTC
TTATCAAGGCTGGAAACTCTGGAGAATCAATTGGAACTCGTCTCACAGGA
ATTGCCAGAGGATGAGCCTCAAACACAACTCATGGCATATCAAGATGAAA
GACTTGAATACGAATCAGCTGCTAAGGAAACGCTGCAGAAAATCCTACAA
GAGAAGATAGAAGTACTACAGAAATGCTCTGATCTTGAGCGACTTTTGAG
TAACACAGAGGACGAATGCACATTTTTACGAAACACttgggaaaaatcaa
aagaagaatTAGGGACGTTAATGGAAAGACACACACAGCTAATGGACGAG
TTGAAACAAGTCAAAGAGGATATGACCTCAGCTGAACAAAAACATGAAGC
TACCCAACAACAGACGATATCAGAAAAGAAAGAACTTAAAGGTCAATTAG
AAGATGCAGAAAAACGTGGAAGCTCTTTAGCTGTAGAGGTGGAATCACTG
CAAGCTGAATGTGATTTTACAAAGCAACAGCTACAAGCCATGAAAGAACG
TCTGGAGACAAAGcagaaggaagaagaagaagaaaCTGAAAAGCATGATC
TTCCTTTTGCATCAGACCATGCAACTTTGGAAAAAGATGTCAAGAATAAA
ACAGCTTTGATCCGATCTTTAAAAGAACAAATAGCAGAAATGCAAGCAAA
ATATGAAATGGAACAACTCAATAAGTCAACAGCAGATGACAAGAATGATG
ATTTCAACGAACATTTAGAGATCAGCTGCACACAAATCAAAGAGCTAGAC
GGTGTTCTTCAGTCGGTTGCCGTTACGTTGAATACATGGTCTGATGGGTT
GATGGCAGGTGTGGAAACCAGTACATCATTTCATTACAGCGAAATCCAAA
CCacaacaaatcaaaacaagGAAGacTGTATTGTCAATCAACAAAAAGCC
ATTATGGCGTGCTCGGAATTCCTTAATAATGTAAAGAaacaTTTCGAAGA
CGTTATCGCTAGAGCACCAATAGAACGAGAGCTCAGTCACAATTCAACCG
ATGAATCGATTAAAGGT

Run BLAST on NCBI

transcript from alignment at sc0000122:451205..462054+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011205 ID=TCONS_00011205|Name=TCONS_00011205|organism=Clytia hemisphaerica|type=transcript|length=10850bp|location=Sequence derived from alignment at sc0000122:451205..462054+ (Clytia hemisphaerica)
ccatgtgctcgcacggtggcctgcgaacttgtatagcgttattattatta
ttattattatttaactCTCATTTTAGATATAACTTTATAAAcaaattcta
tttttccttgCTTGGTTGTAAGACTAATATGACATGATGAAATGGCTGCA
CTTATTGCACCAAGACCAAATTCGCATCCCTTTCAAGAAAGGCAGCTATC
ACTCAAGGAACCAATAAAGATTGGAAGAGCAGTTGCAAAGGCCAAAGCAA
CACAAAATAATGGCATCTTCGATTGTCGTGTTCTTTCCCGAAACCATGCT
ATGCTCTGGTATGAAAATGGAAAGGTAAGGCACCCTTATCTTGATGATGA
TGCAAGAATTTAAGGAAATCCAGAGTAACCGATAGCCCTTGAAAACtcat
tgaaaaatttgtttttaattcaaCCTCCCAAACTNGTAGCCCTTGAAAAC
TcattaaaaatttgtttttaattcaaCCTCCCATACTGTACTCCATGCCT
TAATTTGAAGAAGGAAACAATCTCTAAATATTGTGTAGTTTTCCAGGAAT
TTGGAAGGTAATGCAGGAGTAAATTGGACCATGTAAAATCACATtttgaa
aaagcttttaaatCAATCTTGTGCTTTGTTTTTCATAGTTCTTCCTCCAA
GATACAAAAAGCAGCAATGGAACATTTGTCAATGGCGTTCGATTGAGCCG
TGGGGCTGAGGAAAGTGAGCCCTGTGAAATCAAGTCTGGTGATATTTTAC
AATTCGGTGTTGAAGttgttgaaaatacaaaaaatggtATGTCTACACTT
TGAAACAACACATTTATGTTATGCTCAATATTGATCTCATGTCCTGGTAA
CAACTCTGATAGGAGACCTAGTCTATTGTAATTGAATATTATTCATTGTT
AATCAGCTTTCCTAAAATTTCAACATAATGTATTCCTGTTACAAAATTCA
GTTTATAGACAGGTATGAATTTGAAAGCATATTAGTATTATTTACTGCTC
CATAACGATTTCTTATCAATGTTCATTTTCACCATAGATCATAGCATTGC
ATTTAGATCTctatttctttaattttagtGACACACGGATGCATCATAGG
GCTTGCAACGCTTTTTCATGAAGATGGAACTGAAGCAACTGGGTACACTT
TTGAAGTTTTGATAAAGTCTTTTTGCTAATGTTACTTGCCGAAATATCGT
tgtaaatttataaaaaaattcctaTAAACTGTTTTATTGActgttatatt
tttttgaatgaaaaaataaagacaCTATATCAAGAATCGACCTTCTCCGG
CAAAAGCAGAATCTTTATTATACTATGCTTgaacattgaatttttttttc
tttattcaggGCAAATGAGGAACCCCAAAGTGTACTATCCTTGGCCTCTG
TAAGTATAAAGATATTGGCAAGTATCATGATCATTTTCAGGGAAATCTTG
TCATAAGCACTGCAAAATCTTATTTTATAGAATTAATTGAAGTTCTCTTT
ATTTTTAGGGTGATAAACCTATCCAACCAAAAGAACTGTGGCAATTATCC
CAGTTTCTTCAGGTAATCTTGTTGTCTGAGTAAAGTTTTCTTCACATAAT
TTCTTTGCTTCTTAATTTTCATTGAACACTTGTATAACAAAACAccattt
caaaaacaaaattttacacggttataaaattttttgaatttggtgTTGGT
GAGAGTGCTTCAAGTCCTCTTTACTTGGTGGATTGACATTTGTTTATAAC
ATACAATCAGTAAATTAATTTTGAACATTCTTTTAATCGTAAGattattt
aatattttatttatttctaggcAAACTTGAAAAAGGCATTTAAGAGGTCG
AAATATCGTTTCAAAAAAAtgtgttatgttttattttgatttggtcACAA
GGCTCTTTCTTTATGTTTGACTTATTTATTTCTAGGATGCCTTACATCGT
GAGCAGATGCTTGAAAACAAACTAGCAACTTTGCAAAGAATGATTTCCAA
TTCTCATGCAGCATCAGACGACACATTCCAGGTTAACTAATTTCTACAGT
TTTTGAGATACTTTCCCATTCCACCATTATTACGCAGTGAAATCCTTAGC
TTTTTTGTGGCTGTTATACAGGGCGTTCTAGTATCATTTGGTGTCCTCAA
CAGTGGTTATTACGACATTATTATGACAgaacctttttgttttgtttggt
tgCTTCTGTAAtatacaataaattttgattcttcttgaaacttctttttc
atttgtaGGGCTTCATACAAGAGGATAAAGTCTTATCAAGGCTGGAAACT
CTGGAGAATCAATTGGAACTCGTCTCACAGGTACGAAGGTTTTGGTATCA
AGAATAAACTACAACACAATAAATCGTTTCAATAATATCATTATAGAAAT
GGACGTTTAATATGGAGCTTAATTAACCCTTTATGTGAACAGTTTAACTT
TATCTTGTCGACTTTTCAGGAATTGCCAGAGGATGAGCCTCAAACACAAC
TCATGGCATATCAAGATGAAAGACTTGAATACGAATCAGCTGCTAAGGTT
TGTATTTGTCTCTCACTTTCTTCTACAGAAGATGTcttgaattgttttta
cttgttTTTGTTTGTGATTATAAACGTCTTAAACGTcttaagaaattatt
ttttttaaattttttaattgagTTCTTCTggttaaaaattgaatattctt
atagatgGTAATAGATCTTATATAATTCTTATGGACAAATTTTAATATAT
CAAGTTGAAATGTAAACTTTTCAGGAAACGCTGCAGAAAATCCTACAAGA
GAAGATAGAAGTACTACAGAAATGCTCTGATCTTGAGGTAAAGTCATAAT
TGTCGGAAGTCAGTCAGTGTATTAATTACCTGTTTCTGAGATTCCATCAA
GTTATCGTTGCTACCTTTTGTATATCTTTAATACAAGTTGGGAAAAGATT
CACTTCAAAAATTTATAACTTCGAATATTTTAACAGTGTTTGGTTAACAA
CCAACACTAagcatttaaatatttttgccaGCCTTATattgaatacaatt
ttttcttcaGCGACTTTTGAGTAACACAGAGGACGAATGCACATTTTTAC
GAAACACttgggaaaaatcaaaagaagaatTAGGGACGTTAATGGAAAGA
CACACACAGGTTTTatgtttttctcaaatttcatatCTTCAAATTTCGTA
TCTTCAAATGtcaTATCTTCAAATGTCAATTGGAATtctaacttttaatt
tttttgactttagtAGAATTGGAATAGAATTGGAATAGAATTTAACCCCT
CCTAttaattttccttttcatttttctcctccaAAAGCAATGAAACTGTG
AATCGGTTTTCACCATAAAGTTTGAAAGCTTTCTGAGTGACCATCTAAAA
ATTTATTGTCTTTTCACTGCAGCTAATGGACGAGTTGAAACAAGTCAAAG
AGGATATGACCTCAGCTGAACAAAAACATGAAGCTACCCAACAACAGGTC
TGTTTTGCATTCATCCAAGCGTCTATCAGTTTCAGAAAATTGCTCTGTAT
AAATTTATTTGTTCACCAAAAGTCAATAATAATAGCCCTAACTACCTTCA
GCAGTCCAATGCTTCCTGGACCAGATAAAATATGAAGGATAATCTAATCT
TGAAAATAACCTCCATACCTTCTGAAAACAACCCCTTGTTTATATTTCCT
ATCTTGTAACCAGCATAAGTAATCAATCCTATCAATATCTTTCATCTCAA
TATCTTTCATAGACGATATCAGAAAAGAAAGAACTTAAAGGTCAATTAGA
AGATGCAGAAAAACGTGGAAGCTCTTTAGCTGTAGAGGTAATTGGAACCC
AAATGATTCTTAGTAGGTCAGGTTCTAAGGTGTCACAAGTATAGTGTTCC
AATACCTTCACTCGAGCGTtgtatgaaattttgagtctctAATTAATGGT
TTTTATCACTATTTTTCTATCCTATGGGCATCAATCACTGTTGCAGGGTC
TATTCAGAGTCAGctctgttttactttattcaaTTACTCTTAACCTTCCT
CTAGTATTCTAACAAGTTCAtgtcctttttggacctaccttaaggtagtg
tcctataaattaacccgtgttcgttagttagttcgttagtacgttagtta
ccaacttttctcgagattggctcaNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nttttttcaacttatttaattgtttctttacagaaaaatgttctttatga
tgatgcccaaaacttagcattgtttgatttccaaaaaaatcatcctttga
atcaggaactccttaaaaatcgccggaacaggcgaaaaccattttttcaa
cttatactcgacagatatactttcaccgttaaacatcgatgcgtttctta
attgctttctccgttccaatagatatataaatcgaaatttaaaattatac
attacttccattaaattctaattattcgttttataaataggtaggtccat
taaagtattacttgttatTTATATAAATGACAAAcccattgaaaaaagaa
attgcacTTCTTCACTTCAGGTGGAATCACTGCAAGCTGAATGTGATTTT
ACAAAGCAACAGCTACAAGCCATGAAAGGTATATTTCATCACATTGTGTT
TGAAAATCTCTACATACAAATTGACTACAAAGTTAAGGAACGTTGCCTTT
TAACCTAGTCCAGTACCTCTGGGAATATTACTTAGTGCTTTTAAACAAGG
ATAAAGACCATTGTTTTTGCTCTGTAGTATTTTTTGTAATAGTTGCTAGT
AAGTGTTTATGGAAATACGAAAACAATCAATCACGataaccaaatatttt
aatatcATTTTTTCACCAGAACGTCTGGAGACAAAGcagaaggaagaaga
agaaggttTGTGTATTTCAATTTCTCCTTGCATTAAAGGATTCTAATCAT
TAGCTTAGCTCAAAAGGTTAGATGTGCCCATCTAAAATACCAGACACAGC
AACCTTTTGCCAACCTTTATGCTGTCAGTCTCTGCATCATCGAGTTTGAG
TAGACCTCTCCTCTACTAGTATATAGTTCTCCTCCGTAATGTATTTTATA
ATTATGTATTACGTTGGTCTTGTCCTTTGTGAATTTAAATGTTTTACAAG
TGCGATTATTGAACTGAATGTATGCTGCAAGGACTGTCGAGTTGAAGTGA
CATGTTTGAGTGTTTTAGTAATTATAAGCTTTCCATGTCTATGCTAACTT
ACTTGCATATTCTGAAAAGTGTCTGTTTCATTTTCAGTGTGCTTGTTTag
gttttttctttttggttaatgattttgtttttgtaggttttaaagggaca
ttaaagtagtaaaatgtaaacattgcgcgaaccacgtgtcatcaaagaga
acaattaaaatcacgtgtccaaaacaaacttgtaaaacaattgaacaatc
aaaattagccatatttagtttgattttttattttgacatgtgacatttgt
tttgattttgtattcgCTGCatatacagtttgtttacaaatttcgcaagt
actgttatgtccctttaaagtttGTTTGTTCTTAGACGTAGTTTATTAGA
TTTTAACATTTTATTCTTGCACAGTAACATTGTAGTATTTTATCGCTTAG
CAATTCACCATTTTGTTATAACATAATTGAATTCAGTCCGCTTATGACAG
CAAGAGGAAGATTCAAACCGCATCGAGACTGCATGAAATAGATTTTCTTC
ACAATATACTTCTAGAGGCTCAGATATAAGACAGATGACATCTATGGAGA
GTTTGTTTTCCCAGTTTATGGAGATTCATTCCAAACgacaattcaaaaaa
ttttgaagaattcgATAGTTGTTGAATCAAGTTGTTGAGAGACAGGCATA
CATACTTTAAATAGGGATATCGAAGTGATGGACCATTTGAGCAATTGGAG
AAAGCCAAGAATGTTAGCAGACCTTGAGGTGAGATAGCTGAACAGTTTGC
AGAGTTACCCTTAAAAAAGGCCAGCAGTGCAACATACCAAGACAATCTAC
TAGAAAGGATGGCAAACAAGTCATCAAGTCATTCGAGACAAATCAGTTTC
TAGTGAGAAAGCCGGAAAGAGAGCAAGACTGGAAGTTTTATCCGCAAAAA
CTGAATTATATGTCCAAAGTATTCCAGCTATGAAGGCTCACCATCAAATG
AAATTAAATCTCAAGTCAAGTCTCAATAGATGATAGAAGTTTACGAAAAC
ATCGAgcaagaaaatgatttttaacCAGAATTTGAAAAGATCCCAGAATT
CACAATTAGTGGCTGGATACGTTGATACTTCTTATCAACTTCCAGAATTA
CTGAAAAACATTGTCaagaatatttatttatttttcttagaaaCTGAAAA
GCATGATCTTCCTTTTGCATCAGGTACATCATTAACATTATTTGCAAATT
ATAATTTGTATTTACACTTTTTAGCATTAGGGTATTATTGTGCTCTATAG
ATATGCTTATTACGTGTTTTTGTAATAAATGGTTTGAGAATCAGCATGCT
TGTGTAATTTTAAACAAATGTTTTACGAGTGTAATGCTCACCAAAAAAAG
GCTAatattttattcaatattttaatttttgctcgTTAGGTACTGTTTTG
GAAATTatatgtatttttgaaaatggcaTTTCACAAGTCAATTATTAATT
TTGTGCGATCTGGTTTTATCTCGTCTTTATGCAAAGCTATGTCAAAACAT
AAACTTGTTTCTTAACCTCGTGTTTATTATGGCTATTATTTAAACTCATT
CATTTGTACTTGTATTAGACCATGCAACTTTGGAAAAAGATGTCAAGAAT
AAAACAGCTTTGATCCGATCTTTAAAAGGTAAGTGTTGATagtttccata
attcgaacaacAAGGGGTGTGGGACCAATAAGCGTTCGAGTTTCGGAGAG
TGTAAAAGATGTAAACTTGTGAAACGGAATAGCTTTCGAATCTCATAGGA
TCGAAAAAAACTTTCGCCATTGTATGGAGACGTCCTCAGTGATTTTAATT
TCGGACTGGAGAGAGAACTACCTGCCCCTCCAAGACTTCAACAACCTTAG
TTGATCAATTTNCTTTCGAATCTCATAGGATCTCATAGGATCTCATAAGA
TTTTAATTTCGGACTGGAGAGAGAACTGCCTGCCCCTCCAAGACTTCAAC
AACCTTAGTTGATCAATTTATATCAGATAATACATTTTTGTACCGATTCT
TTACTGGAATTCGGAAATTTTCGGAGCTAAACATACACAATATCTTCTAA
CTTTCTCTCTTAGAACAAATAGCAGAAATGCAAGCAAAATATGAAATGGA
ACAACTCAATAAGTCAACAGGTAATTGTTTCTTGGCCTTTCTTACTATCT
TGATGTCGTAAGAATGGTATAGGAAGTAATCATTTTATCCTACTTATCAA
GCTAGCAATTAGACAATATAAAAATTCTGAATGCATGGCAAAAGGTTCTT
TAAAAGTCTCTCTATTGGGACTTTGTTTTGACTTCCAATAGAATCGAGTT
TGCTTTACATTTTCTttaattgttgtttttctttaatttccattttgaat
ttgaagctCTCGTCATCTTTCAAATAGGAGAAGAgacaaaaaatgaaatc
ttATTGCTAAattctgattttctttttttgttttccgCCATCAGCAGATG
ACAAGAATGATGATTTCAACGAACATTTAGAGATCAGCTGCACACAAATC
AAAGAGCTAGACGGTNTAGACGACAAGAATGATGATTTCAACGAACATTT
AGAGATCAGCTGCACACAAATCAAAGAGCTAGAAGGTGAGGAAGCAGCTT
CCAGAAGAATTTCTTAATGAACGAAAACTTATGATCAAcaaaaaacattg
gaaaatatCATAGTTTCTTTTCATTGGTGGTCACTGATAGTTTGAAAGGA
TTTCTAGAAGACTCGTTGAAGTTTATTTATTGAAAAACCCTTTAAAAGCT
TTTGTAAATAACAATAAGGTCTCAGAAAAGACTTATGGTGGCCTTTATTG
GTTATGATTGTAAAGGTATCTATGAGAGTCAAAGGTGTAATTGATAAATA
TGCTCTACATGAAGATGCTATTTTGTTCGCTCAGAAACTCCCCAACTTCT
TCACATTTCTTTTCTTGTGTAGGTGTTCTTCAGTCGGTTGCCGTTACGTT
GAATACATGGTCTGATGGGTTGATGGCAGGTATGTGATATCGTTTGCTAG
CATTTAAAGCCTGCTGAATGGAAAACGAAACGAAATAGCTAGAACAGCAA
CCTCGAAGTTATCATAACTATTTACATAAATGTAACTGTGTCTGTAACTT
ATATATTACACATATACTCAGGCGAGTGTTTGGGGAAAATGATCCTGTGT
GTTAATGGAAAAGACCTTATGGTGTTCCTGTATATTCACCTCACATTGAA
AATATCCAAAACTTTGTGTTCATTTTTAGGTGTGGAAACCAGTACATCAT
TTCATTACAGCGAAATCCAAACCacaacaaatcaaaacaagGAAGGTATC
AAGGACAATAATTGTTTCTCTTCCATTTGAAGAATTGTTAGGATATTAGT
CCATGTGCATTTTGtcgggtcaagctggagtttttacaagttctttgatg
cCTCTGTTGGtcgcgtcatccctattgtttaaaaataaccaatcagttaa
gcatcttgtaaaaactccagctcatcccattttgtcaatgaaaatcattt
ttgataatTCATTTTAATATAAAAGGACAAGATCAGTTTTACAGGAacat
tttatttcttttgtttagacTGTATTGTCAATCAACAAAAAGCCATTATG
GCGTGCTCGGAATTCCTTAATAATGTAAAGAGTGagttataatttcttag
gtaTCATATAATTTTATAAGTTTGTGTGATTTCTTTCGCGAGGGGAAAGA
ACATGTATGCGAGTATTTACTCCATTtggttttgattatttttctttact
ttctgTCTTCAATAGAATTGTTGGGATAAGTTTATTAATGAAAGTCTACA
ACTAAAGTCGGTGGTGACCCGACTCGAAGGCTTATCTTTTGATGTctatc
tacctgaaggtaggAGAAGGCGCctcagattttttttctgtctGCGGACG
CAGACCTGAATTAGCAGTCAcagacctgatttagcggccgaagacctgga
tTAAAAACCGAAGACTTGATGCAGCGGTCGAATACCTTTTTTAACGACCG
AAGACCTGGATAAAATGAATTGTGTAAATTtgttataaatcttttttata
aattcaatcaagatttttataTGGTTTCAATGGGAAATAGTATCGAaaac
aaataaagttaaaagattttaaactaaaaagaaTGAATATTAATGCCAAT
AACTCGTCTCGAACTACCCAACTTTCGTCTTGGATACCACTGCACTAACC
ACTGGACCATCGCAACTGGTGCTTTACCGAGTGGTTCAAGCTAGTTTAAC
TGACCCTAACTATTCGGCTGGTGACTTACTAAATCCGGTCTTCGGCCGTT
GATTCAGATCTTCGGCCGTtgattcaggtcttcggccgttgatTCAGGTC
TTCGACCGCTAAAATTAGGTCTGCGTCCGCTGACGGAAAAAACGTTTGCG
AGGGAGCCcttctttctccctggattccTCCACTCACCCTGATACAAAAT
CAATGGAATAAGCATCACAACCCTCAATACTTTTTGCTTTTCGTAACCGA
TTTAATAaatcatattttctttttcagaacaTTTCGAAGACGTTATCGCT
AGAGCACCAATAGGTGaaatattgttttaattttcaataactcTGTAAAG
CTTTTAATATGATGTTAGTGTGATAGCAGTATAACCGGACACGTGGAATA
TTGAATCTAAACTAAAGTCTACATATAAACACGGCCTAACTATACAAATC
AAAAGAGTGTGTAAAATAAGGACCGTATGATAATAAAGATATCACAAGAT
TGTTTATCCTTGTCAAAATATTGAAGCCATTGTATTAATTATATTGATTA
TTGATTAACAACTTTTCCCCAGTTTTAATATTGTATTCTTTTCCCTCTTT
TTACAGAACGAGAGCTCAGTCACAATTCAACCGATGAATCGATTAAAGGT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006277	XLOC_006277	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000122	supercontig	sc0000122:451205..462054 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3.08673e-09	4.95146e-07	0

Blast

[Close]

BLAST of TCONS_00011205 vs. Swiss-Prot (Human)
Match: SLMAP (Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.679e-121
Identity = 190/372 (51.08%), Postives = 271/372 (72.85%), Query Frame = 1

Query:  148 ALIAPRPNSHPFQERQLSLKEPIKIGRAVAKAKATQNNGIFDCRVLSRNHAMLWYEN--GKFFLQDTKSSNGTFVNGVRLSRGAEESEPCEIKSGDILQFGVEVVENTKNVTHGCIIGLATLFHEDGTEATGANEE-----PQSVLSLASGDKPIQPKELWQLSQFLQDALHREQMLENKLATLQRMISNSHAASDDTFQGFIQEDKVLSRLETLENQLELVSQELPEDEPQTQLMAYQDERLEYESAAKETLQKILQEKIEVLQKCSDLERLLSNTEDECTFLRNTWEKSKEELGTLMERHTQLMDELKQVKEDMTSAEQKHEATQQQTISEKKELKGQLEDAEKRGSSLAVEVESLQAECDFTKQQLQAM 1242
            A+   RPNSHPFQER + L EPIKIGR+VA+ +  QNN  FDC+VLSRNHA++W+++  GKF+LQDTKSSNGTF+N  RLSRG+EES PCEI SGDI+QFGV+V ENT+ VTHGCI+    LF  DG EA   ++      P  V  +A+    +  +EL+QLSQ+LQ+ALHREQMLE KLATLQR+++ +  ASD ++Q  I ED++LSRLE + NQL+  S+   ED  + +L+A Q+++  YE+ AKE+L+++LQEKIEV++K S++ER LSNTEDECT L+   E+++EEL  L  ++   ++E+K + + +  AE K E  QQ+  +EKKEL+ ++++ E++   L  ++E+LQA+ DFT ++L A+
Sbjct:    6 AIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTAL 377

The following BLAST results are available for this feature:

BLAST of TCONS_00011205 vs. Swiss-Prot (Human)

BLAST of TCONS_00011205 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SLMAP	1.679e-121	51.08	Sarcolemmal membrane-associated protein OS=Homo sa...	[more]

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TCONS_00011205 (transcript) - C. hemisphaerica