TCONS_00011201 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011201
Unique NameTCONS_00011201
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011201 ID=TCONS_00011201|Name=TCONS_00011201|organism=Clytia hemisphaerica|type=transcript|length=1204bp
ACCGGGTAGTCTAGGAAGCGGAACACCAGGCGACGATGATCTCACAAATT
ACCGTGACCGAGTCGATAAAAAGTCACAAGAATTTTTGCTACAAGAACAG
AAAGGGTAAATTCAGCAAAAACTACACCAGAAATATTGAATACATACCTA
CAAAACTTTACCACTATGGCCTTCGTTCAAAGGTTTATCGACTGGATCAA
AAGTCTTTTTTGGAAGGAAGAGATGGAGCTTACTCTTGTTGGTCTCCAGT
TTTCCGGAAAAACTACATTTGTCAATGTTATTGCGagTGGTCAATATAAT
GAAGATATGATTCCTACAGTTGGTTTTAACATGCGTAAAGTTACAAAAGG
AAATGTTACAATAAAActTTGGGATATTGGAGGTCAACCACGATTCCGAA
CCATGTGGGAACGATATTGTCGTGGAGTAAATTGCATAgtaTATATGGTT
GATGCAGCCGATCACGATAAAACAGAATTAGCAAAACAAGAATTACATGG
ATTATTACAAAAACCACAACTCGCTGGAATCCCTATGTTGGTATTGGGAA
ACAAGAGAGATTTACCAAACGCATACACTGAAAAAGAActcatcgaaaaa
ttaaatttgggaacTGTGCAAGATCGCGAGATTTGTTGCTACTCAATATC
CTGTAAAGAACGAGATAATATcgATATCACATTGCAATGGTTAATCCAAC
ACTCCAAATCGAGGACTTAGGACATCCATCAACAATACCTCCAATGTTAT
TATTGGTTCTGGTGTAATAATCcgatttcaaatatttcttattttgtgca
ttttttgaaaacatagaATGAATTCAAATTGACAGAAGCCTCCTTTTTAT
AACGGGCGGCACGCCACTACACTACACTATAAACATCTAAAATGACACCt
ttaatgcaaaaaaaatattcatttcattttactttttatttctttttgtc
aattttttggcAATAGTTTACTGAAGTCGGGTTGcagttttgtttgattt
ttactatctttcatttgagaCTTTCGATGATGAATGAATTATTTAAAATC
ATCAACAATGCAAGGGGGTTGCGTTTGAATTTAACAGAGTGGAATAACGT
CAAATCCCTGTATCTGTGACCACATCAATGAAATAACTTCAGACATTTGA
ACGTCCCTTCTACTAATGGAGCCTCGAATCTAATCCGTTTCATATACTGT
ACCT
Run BLAST on NCBI

protein sequence of TCONS_00011201-protein

>TCONS_00011201-protein ID=TCONS_00011201-protein|Name=TCONS_00011201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
MAFVQRFIDWIKSLFWKEEMELTLVGLQFSGKTTFVNVIASGQYNEDMIP
TVGFNMRKVTKGNVTIKLWDIGGQPRFRTMWERYCRGVNCIVYMVDAADH
DKTELAKQELHGLLQKPQLAGIPMLVLGNKRDLPNAYTEKELIEKLNLGT
VQDREICCYSISCKERDNIDITLQWLIQHSKSRT
Run BLAST on NCBI

transcript from alignment at sc0000122:371415..392984+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011201 ID=TCONS_00011201|Name=TCONS_00011201|organism=Clytia hemisphaerica|type=transcript|length=21570bp|location=Sequence derived from alignment at sc0000122:371415..392984+ (Clytia hemisphaerica)
ACCGGGTAGTCTAGGAAGCGGAACACCAGGCGACGATGATCTCACAAATT
ACCGTGACCGAGTCGATAAAAAGTCACAAGAATTTTTGCTACAAGAACAG
AAAGGGTAAATTCAGCAAAAACTACACCAGAAATATTGAATACATACCTA
CAAAACTTTACCACTATGGCCTTCGTTCAAAGGTTTATCGACTGGATCAA
AAGTCTTTTTTGGAAGGAAGAGATGGAGCTTACTCTTGTTGGTCTCCAGT
TTTCCGGAAAAACTACATTTGTCAATGTTATTGCGGTaagaaaatttgtc
aaattttgtttttcactCGATTGTTGTACCCTTGTTAATGTTATTGTTTG
AGTGGTCAAAATTCTCACTGGTGCAGCAGTTCAGGATACAACTAAATTTT
TAAACCCTGGAGCTGGACACAGGCTAGACAGCAGATTGGTAAATTGCTGA
ACGTTTTTGCaacattattttaaaatttgtattCCATTGTCTGCGGCGAG
ACAGAAAAAAGTTGCAACTATTGatgaacaaatgtttctggaaatAAAGG
AAAACATAGTTGAAGACTGAAACTTTGTATCTTTGCTATGCTTGCTATTA
TTCTAGTTCTTTCAATTTCatgtaccgtgagaggtcctaaagccgacagc
ccagcctaattccgaccccccaaataactgttatgaaaaaaaattctatg
tttacaaacattcNATTTATAATTCATTAAAAGCAAAAATGACATAATCA
AAGAAATTGTGCATATTAATATATTTAAACCTTTTAGGAAACAGAACACA
AAATTTGAATGTGTTCGTAGCTTTAGCGAAGAAGCAATTATAAAATACAA
CCTTGTTACCCCAAGAGAATCGACAAACTATGTTATGATTTCAACAATGA
TAGCAAGACTACTAATGTTAGCGGAATTCTCTAGGGAGTCTTGTTGTGAT
GTAACAGTAATTGTCTATGGAAAATATCATTGCAAGCTAATGGTAATGTA
CTGATTGAAAAAATGCAGAAAATGTCATATCTAGATCAATTTTTGGGTGT
GTTAGAATGTGTTGAACATTATAATCGAATTATTTAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGGGTAAATCGATTGAGAATAGGGTCACCTGATTTTTTTACATGCttc
agcttttttcacatgcacgtaaaattctACTGAAAGTATTACAAAACACC
TCTGGTAGAGTTTTTCCTCGTTGCCAAAGAAGATGTACGTTTAATTTACG
TAACTTAAGAGAATGAATGACTATCAAATTTTCGTAATGCCTTCACGaaa
aattttacgtgcatgtgaaaaagaTTAATCTTGGCTTTTCAGGTAAACAC
TTACGTTTTCTTCGAAATATTTTTCCTGCAACATCCAAAAGAGAAAATGC
TGAACAAGGAATTCGAGTTTTTCGAGATTTCCGCAGTGAAGCGATAGACG
GGATTCTGGTCTATATATTTGTCTGTTACAGAAATCTAAATGGGACAGAA
ATAAACTgtccaaaactaaaaattcagttggaaTGGTTTTTAAGTGCAAT
TTCtgatattgaattttgaatggggacgaaatgaaagtgaaagtgaggCT
GGAATTGTAAGGCTTTTATTCTAAAGGGGATGAAACTTTTATTAAGCTTT
CCAGTGTGTCCACCGGGTCTGtcacacaggggtgtataattATTTGCCAT
CTGGTTTGTGTATGACtaatatcataaaaaaaaaacatcaagatgaatat
aacacccctgtgtcacagacccggtggaccccccaccccggtggaaaaat
aggccaaaaaatcgtccccggtgggaaaagtATCCTACAATGtcaacccc
actgcgaaattgctctatgattttatccccattgaaaactgctTACGCTA
AACTGTGTAATGGCTACCTCCAACTTTTATACGACCACCTTAGACCTATA
TTGCTGAATCACATTTACTAATGACTACTATGCATCTGATTGCCAAACTC
CTTGAGACAACGTTGAGATGTGCTTTTTTCTAAAACATTATCTTCCCAGG
CGAGCGATGAGGAGAATTCGGTAGTAGCGGTCAAGGCGCTAACCTGTACT
ATGACTCACCCCTACACACCAAACCAACTGAGCTAACAACCACTAAGCTA
ACCATAGCCACCAAGTCTTAAAATANGACTCATCCCTACACACCAAACCA
ACTGAGGTAACAACCACTAAGCTAACCATAGCCACCAAGTCTTAAAATAC
CCCTTAAAAGCAAGAGATACAGAGAGATAGTCAATCCCATTGGATACTTT
TCTTAACCTTATTCCCACAGATTCAATGGGTCGTTGAGACAGGGATCTTC
TAATGATCAAATCTAAAATGATATTCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNatagcccaaaatcgactttctcgcctgaactttaaatcttgaaaa
acgttaaaataaacggaattctcattatatttcaaccatgattgtagcgc
AACATTTTtcttagacgatgttatcgtccgttacagtgatagtaaaggtg
ggaaaaaatggcggtatggcattatggcggtatacggaaaaaatcggcgg
gagagtttcgactctaccgactgttaactcttttcggcaaaaaaaaccgt
ttgcgaattttcttcggctttgggcttttttcttagatagtgattcgtct
tagactataacatagtctacaTTTTTCTTGGTAAGTTTAAACTTAAGATT
GTATTTCTTAAATTAATAAAAGAAATAGCAGACGTTTTAGATGATTCACG
TGCAGGGTAGAAATATTGACATAACGAGACCAGCACGAAGGATCGCCGTA
GGTCTTTTGAATCGAACAAAGGATACTGAAAATTTACGAAATTGGGTGAA
TAATGATATTATTGGTCATATCTATCCTACAGTGTGTCCGGAGGATAGTA
GAATAACAAATCCTCAAGTTCCTCAGTTTTCTATTATAAAAATCCGTTGA
AGCAACAGATCCTGAGGATTTTTTTGTACCAATCTGTTCCCCTTTTTTCC
GGATATACTCTACTGTTTGTTTTTCACATTATTTTTGGCATATGTTTTGT
AACGTGAAAGACACCTCAAGGAATCAAGATTAAGATCCAGATAGCGAAGT
TTCGAGATGACGAGTGTTAGAGATAGCGAGCACTTTTAGCCTAAATTTGC
TTGCCAAAAATATAAAGTGCTTCATGTGGCGAGCATCAACTGCTCGGGAT
ATGTATTTTTGGTAAGCTTAATGAAGTCAAATGTATGTTTACGATTATCA
TTTCACTATTTAAAGTTTTATTGATGGAAAATGCCttatattttctggtc
tgtaaattattaCATTTTCCCGATTTCATCTAATTAAAAATAAGCAGAAA
CGCATTTTCAACACATGACAATTTTAAAAGCGTTTCAACTTTGATTTACA
TGACTTGATGACAAGTGAGATATTTCAAATTGagtcaattttatttaaat
caaaagtAGCCAGAAaagtggtctgtaaaataccaaaggcactctcaggt
gagttaaggcaagttccaaacatattttgcgtgacgcgcaccgcttccca
ttgttccttaactttcgtatatagctcaaaagaagcgtattaacgagagg
atttcggaaaatgctgggtcaaaaatttaaattaagccaatctcaagata
tcgaccaaaaactgattttgacgttaggaaatacgtcgaaaaaacacgtc
aaaaagacaagttaaatgACGTAATTAAAATAACAGCGATAACTTCCATT
CCATTACTAcaattaacaccaaattttgacttgggcttaatttaaatttt
cggcccagcacttttcgaaatcctctccttaatacgcttcttttgagcta
tatacgaaagttaaggaacaatgggaagcggtgcgcgtcacgcaaaatat
gtttggaacTTGCCTTAANTATTAAAATCAAAAGCAGCCAGAAAAGTGGT
ATGTAAAATACCAAAGGCACTTAACAACTGTTAAGTCAGGCTTCTAAACT
AAGAATgtatataaagttataaatattATCAACAAAAATGCTTCAATTGA
TTGAAAATATGAGTCTCAGACAACGTTTGAGGTGTCAAAACTAANCCTAC
CCCAGGCAAATCGGCTCCAAAAACGATTGCCACGTACTCTCGAAACACCC
CTCTGAAAAGTTATCGCCCCCTGGTTAGCCTGAAAACCATCGCGATTCTC
AAAATATAGAAGTGTTTGAACccaaaaacagtttcaaaccTTTTTCGCCG
TCAAGGTGGTACCTCATGCCCCATATTGCCTGGACtatgaatgtaaaaaa
ttgcactccaaaaccatccccactggaattttcgagctggaaacaataga
ttttctatcacCATTggaattttgatagaaattttcatccccactgaggg
aaaaagttagggaaaaagttctaccggggcactgagacaggggtgtaata
tacAAATTTTNTGCcttaaaaatttttcttgtattttcgggcagttttga
ccgaatttttcaaaataaatggactgtaaatcaaaaaattgtcatctaaa
atcaataaaactttCCACAATGCTACAACTATACCGACTACGAGCAATGA
AGGCATTAACATCTATTTCATGGAAGAATTTGGCCCNATTTTCACAGATT
TCTTTGAaggccgaagggctagatgtcgtgctttaaccTCTTCCTAGACA
TACGGAGGGGACTGGGCAAATAGATGGTACGGGTATGcgaacagaaaaaa
atttatttcagtcGCCAATGAGTTACGAAAAAGAGCTAAATTGCCAAATT
TTCTGATTAGTTTCTACGGTTTTGCCCTCTAAATTTTTGATTACCAAACA
TCGAGCGGGCCAGCCCGTCTTCCAGCAAACCTAGTTCCCGCCGCAAATTG
CTTTCCGTAAGCGACCCAAGCCCTGATTTAGTGGCCCAAGCCCTGATTTA
GCAGCCCAAGCCCTGATTTAGCGGCCCAAGACTTGAATTACCGGCCCAAG
ACCTGGGAAACTTTGCGATttttgagactttaaaaataaaattgacgaAA
TTGCGAAATTGGGTTACGGTTATAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgctcttcattt
aagtgtactctttgacgacatatattatctttactagcaaggtgtcatgt
aatacataataattgtaacatacgtcgtctatttgtattcttatcctgta
atatataatataatgtaatatacgtcgtctatatgtatccttacacaaag
tcctggccccgcaatcaagccaagtgccagtgtaaagNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNattttcgtgtgctttggaaaatcaa
aacatctcattactttttatgatgctgttactactgttgtcatttatgac
gttgtgcatattgcaataaaaatatgtattttgttataagaagcaattat
tgttatttggttcaattggttcaatgtataaaatctctcagtttagttga
cactttggtatcttcgttgcgtcacagcgaaaggtttgtttttattttag
tttgtatctttgaaagaccccatcggctttaggctgggctgtcggcttta
ggacctctcacggtagtttttttcatacactttttttaggacgatctcaa
tcaaacggaatcgacgatctaaccaatcgaaccaaatcgaacgcaatcga
ccaattgaaattcgattgtcgaacgcaatcgaatctcaatctaacgtcaa
aattctgggtaatattcgattggttcgattgttgttcgactggttcaatt
gagatcgtctggctttattcttgcagcttcccaacatccaggCTCTCAAA
CACCACAAGcagaatgaaattactttcgatttcccgtagaaattatgcga
tgaacaatccgggggtcaatgaatcgacgatcgaacgcaatcgaacatca
atcgaacgcaatcgaacatcaatcgaacgcaatcgaatatcaaccgaatc
tgaaaattgcggtaatattcgattgagattcgattgcgttcgacaatcga
atttcaattggtcgattgcgttcgattcggttcgactggttcgatcgtcg
attccgttcgattgagatcgtctggttttTTGCTTCTCTAGCATCCGGGA
TGGGAATGTCcctaaaacaaaagtttttatttctgccgatgtggattttc
ttttgatttgcagtttctcctttcagaaaaacttattctttatcGTAAGT
TTGTCTAATGTCAACACCCCTCTTCttatttcgacacccttcttttgAAC
ATagtcatagtgtcctccagtcagtctgggaaatcctttcaattgcacgc
ttatgttccgaggccgtaagcgcgcaattgcacagttatcaaaatggcag
aatttttatcgaaattgttctgaaatgggcggtaagcgttaagcaagatt
gacgggtgacggcttttgccgtaagcgtgcaattgcacgctttaaaattt
cctatatttttgacacgcaattccttccgaaagctctgttgaatttcaaa
agcctagggcagtttttctcaaaatttatcgtagaagaagattccgtaaa
aatggattgcctgttaaaccatgccttcatcgaattagagaattctgaac
cccttgaaatccctaagcaatttcaactggggcgggagcgggcgtaaatt
ataaccatgcaattgcgcgcttacgcccttggaacataagcgtgcaattg
agaggatttcccagactgccagtgtttgttccccccaccaaattcttgat
tttttaaaatctccccccactttttttccccctatgacttCTCAGTtttt
taccgtcaactgctttaacttgggtcgattggtcaaaacatgggactggt
tgatatctggtctgtattttcacttgcTGTTAAAGAGCATGAATCTGATA
ATGTCACCCAAATAGGtgacaaaatttggaaaaaataaagttttgaattt
catttttattcctggataatctttttattaaatgacttcaattttcagaa
aacataaatATCAGGGCTTAATCAAACTGGCTTGGTCCAGAAATTTGACC
TAGAGTCGTTATAAtcagacaaatttgacaaaaaactcTTTGTAGTTTAC
ACTTCATTTGAGATAAAATATGCATAATCTAATACTTGTCGTAGATTTCA
GTCCATGGCTAATATATTAATCTGTattgaaaagcaatttttaccgTCCA
GTatgacatatttttcaaattctgacactttttcCAGAAGGAaatctaaa
atactaaaaaatattcccataaagtttgacttcatgaaaagaaaactggc
tATGATCAGGTAACTTCATTCCAGATTTGAAGGACTCATTataagctttc
aaaaaaaacaaaagtttgctATATTTCAGTTGATCAAAAAGAATTAGAAA
ATGAAACCTTGTTGGTTGCGGACATCACTTTTTGTCAAATTACTTTAAAA
TCAGTTATTAAACATTAAACTGAGTAATTATTTGTACGATGGCTCTGAGG
GAGAATTTCCTCTCCATTTCAAATTCTCTTTTCCTTTTAAAACAAACAAT
AGGTTCTATTGTTTAACAAAAGGAGAAGTGAATTTTAAAAGGAGAATTGT
TTTCACCTTTTGTCAAAAGGAGAATTATTTTCACCTTTTGTCAAAAGGAG
AATTTTTTTCACCTTTTGTCAAAAGGAGATTTTTTTTCACCTTTTGTCAA
AAGGAGAAtttttttcaccttttgtcaaaaggagtattattttcaccttt
tgtcaaaaggagaatttttttcaccctttgtcaaaaggaaaatttttttc
acactttgtcaaaaggaaaatttttttatcgcctggattttggattttta
gatttttagtcATGCATTTTAACCTTGAATTTTAACCTTAACCTTAATCA
TGAGTTGATGAGGAAAAGTTTAGTATTTCCCGTTGTCTTCGGACAAACTT
TAATCTGGCATACACTAAAAGAATTATCGACGGATCGACGGATCGACGGA
TTACTAAAAcacggatcgtcgtatttcggattactaaaaGACAATCGCTG
TATTTTAAATTACTAAAACACGGATCTGAAGGTGGGGGGCGTACATTCTG
GCGGCATTCGGGAAACGGTATTTTGCAAGAGCCACGGTGACGGTAAACAC
CTGATTTTTCATCCGGGATGAGgtaattctcataaaaaacaacggtattt
cggtaaaagCCATGTAGACGGTGTACATAAAATTCTCggactataaaaaa
gcttgtcacaGGAGTAAGCAAAGGtgaaaaaacgcgaaaaacatccaaaa
aataaggatcttacatttcataaaaaaccttatttgaaACGTTAATGCAG
ATTTGCACGGGGCTTTTTAAAGCCCGGTTCctatgaaaatgttttgttcg
CGGAGaaactaggctacgtcatatctcctTTGTTCCACCTGATTTTCTCT
TCGAACAGAAGAAGTTTTACGTACGCAGCGCAGGaatcgggtaaattaat
gcgtgtccaaattttcgttaattcttcggacccatcatcacNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCTAAGGCCCGGAC
TCCACTCgcctacgctgtgattgcacttctcaagcaaaatcttttatgtt
gttggtcaaaagaaaaataaaggaatgtcattgtactctaccgccacttt
ttccccgtaaaccgccctgacgccctaactctttctcgcatttactttaa
acggacaatagcatcgtctacatcgtaatgcgcttctttaaaggtataat
ttattatgccaGGAGGGGTCATGATGGGTCCgaagaattaacaaaaattt
gaacacgcattaatttacccgaggaGATATGACCGTAGCCTAGGATAAAC
CAGACAAAGATCAGCTTGTCCTATCTGTCACCTCGAAACTTTGGGTTAGG
CTGGAGTCTACAAAAATGGTCTAATTGTCAGCTGAAATTTTGCTCGCTTg
ttcttgttccttgggtgaatccctggggtgtttcttttattcaatgattt
atcatagcttagatttgcagctttaacCTTTATCCAGCAAAAAAATGAAG
CACAATTTTGTGACTTGATTGAATTTCGAGgtgatggataggatctagca
ttttcattgttctcGGAGTGCGAGATCAAGAAAAGTAGGCGATTTTTCGT
CTGGGATgaggtaattcttataaaaaacaacggtatttcggtaaaagcca
ggtgactttggtaggaaatcctaccaaagcccAAACAAGGATGAGACAAA
CAAgaatgagcttcactttttgatccaGGCCGCAGATCTAGCCCTTCCGG
CTTTACAGANNNNNNNNNNNNNNNNNNNNNNNNNNTTTGATTTCTTTGGG
CGTGGTCAcaagttttagcctcaaaacgaggctaaactttggggcagact
agaaacttctaaaattgtctgattaggctgaaattttgcaatcgaaacaa
aatacaaaaatagtgaTCGACCTCATATACATTCTATTCCATTTTGCCGA
ATTTTTGACTTCTAGTCCTTAGaattttatgggaaaaacagcaggaccgg
tattttcgaaaaatttggacgggataacgatgattttcaaaaaaatggcc
ggGATTGCGGTAATTCAAAACCTCGTACGCCCCCACCTTAAggcgtttgt
atgaaaaccatGCGGGCCGCGCAACTTATGTAGAAAACAATTTGCTTCAA
ATTATATATAGGAGGTTCACTTCTATCATTCGGCTTTACTTCATTTTTCC
CTCCTCACTCTAAATGCGGTCCGTTTTGTTTCTGGGAAATCTAATAAAGG
TTATCATGTCATGGCCTGGCTATTAGCTAGTACTGTTCATATTCAAAACA
AATGATTGTCCACACACGTGTGCATTCCCTTAGAATTCCCATTTCCATTT
TGTCAAAaggtgaagtgaaaaaaattcaccttgtgtgttaaaaggagaaa
aaaattcaccttttgtgttaaaaggagaaaatagtttACCTTTTATATTT
CACTTCTCCTTTTCATTAAAAGGAacggagaaattttgaaaaagagaata
aaaccGCTTTCAGAGCCATCGTATATTTGGCTTTTAATACTTTGCTGTAC
TTGAACCCAAAacttaatcattgaaatttgttgtcttgaaaggtctttgt
aactatgatttcctgaaaattgaagatttatctgtaaaagagaatccaat
catatatcattttttgtcgtaatctaattttaaaagttaaattttgagct
tgacATTAACTGTTGTACATCTTCATAATCagtaaatatgatttttcctt
gaaaaGCCACTCAACctttttcaatagaaagggtTAAATGGGTATAATgc
tatgttgcggacataactttttttcttccagGGTAGAACCATAGAACATT
TCACatcatttatttaaaattttggagtgtctttttctgttgccaaaatt
taaggaatatttgagactaaatcaatataaaaccaaaagatttggTTTGG
TTTGATTTcagttattacatgtttttctttgaaaagaacaaaagaagact
caacaatgatattaaaactttctaatatttctaatagaagaacgaccctg
gaggacacaaaaaattgaaaaaagcaagaaaatgcATGGTACTTACAAAT
GTAACTCTTTAGTATTGTCAAGGTGTTAGCATAACTGCTTAAGAGGgtta
aaaatctgataaatactataaatagttatgtccgcaacattcAATTTGCT
ACAGAATTTGACTCTGTTTTGAACTATTGGAGCAATTCTAACTAGTCTGT
AAGTGAATGTGTAGTAGATTATGTTGTGTGAACTCTACACAATGAATTTC
ATATGCAAATTAATGCATGATTTATCCTTTATTCAAGCTCACAGGTTCAG
aaccatcattttcaaagaaacaaaaagtttatttttctgttaaaattttc
attttggaccttaacttggcatcagagtatttgttttctatttgNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTCTATTTCTAATAGCCTAAGCATTACttccatataata
aaacatcatgccagcttgcaaatacactttatcagcaacattttagacga
aatagttatgtccgctACATGAAATACATTTGAAAGAGGTGAATAAACTG
GAAATCTTGTCAATGGAAAattatgaaacttttttctgGTTGTAACCAAC
TTAAAATTACCTTAAGATGcaataatttgtcaaagaaacctAAATTTGGT
GATTGGAGGTTGAGAAAACTTCATGATTTgctgcggacataactttttgt
tgcggacataattgatttttggagaaactgttttgtttcaccgtctccca
acaaatagcctttgagacttcaaatttgtataaaatgacCCCAAATGTAA
CCCTTGACTGCCCTTGACATAGAAAAATGATTCAGCTGAGTAAGGATAAC
tccttgaaaaatttaaagaattaaaTAGTGTGCGGACATAACTCAAAAAT
GTGAACGGAAACAAGACACTGTtcacttcaaaataatttttcgcgtTGAC
CAAGATAACTGCCGTTTTTTTGCAACTTGCTCTAGTTTCCCATTATCTGG
GAAggatttaaaatgtaaaaaccaGTGAGCTAaagcttttcaattttttt
ctgtgtcAAATCTTGTGAacggaaaaagttatgtccgcaacatttttgat
tttatatgccaaaaagaactttttttggcGGTTCTTactgtgtttttcat
ttttcatatcctCTGGTTGTAAGAACAACAAAAACCAAGCTGGAAAAAGC
ATGTTGTTGATGAATTATTATACAATGATGTTGatcctttttttaaaaac
cttattttccgttcacattttgaaagaaagccccctttaagaaaatttga
gtacctgttatatcagaaaaaatgactgtttaagCTTGCCCATATCAAGA
TTGACCAGAAACAATAAGATTTGATATGACTATGTACCTATAGAGACTTA
ACCAAAGCCTCAAAGTAGGAAAATTAACAAATCGAAAAGTGGGCCACATT
ACCAGATTCATGCtcttaaatctctttgacaacaattttgtttgataact
ccaccaagtttatcaatcatacttctttgtTCCTCTTAAAGTGCACAGAC
Acttgcgtgtgttccactacagatttttttcatatttcgatttaaaagcc
tactggGTGCAAAAGACATatcgtgtatttttaatacgccgttcattaac
tcaaatcaaatgactttggaggttcggtgaaatagcaataagcaaaaagc
tcacGAGTCCCAAAAAGtctcaaaaatggcaaaaaattaagttttcagaa
agtcaaaaatttttatatagacaTAAAGGATATCATTATCATTTCATGAA
TAAGTTGTGAAAAAATTAGAGCAGGAACATGCTCCATTGAAAAGTTATGA
CCAAATTTCCGTTTTCTGGGCTAAAATCCCTGGAAAGTTaacaaaaatca
agatttttacaaaatgcagtgaagtcaagtttgaagatattctttattag
aaaaacagttaaaagcagtcaaaacgcaaatttaccttacctcctgagtt
tgtctttgttatgctaaaatataacaaacctttgtcatgctgtctaatta
caaaaacctccaatcactacttctccgccatcttgtttcactttaaatgc
cgtgttttaaaattccttagctacattatatgtacagaaaaggttttctc
caggttttttcaatcccgggattaaaCTACAAGGGGGGTTCTGCCggctt
atttttctttcggcgtTGAGCGCCCTggggatacttaacaataaaagaga
ttttaagattaatgttgaaaagcatattttttcgataaatttaggcgaca
ctcaacaaaaaataaggtggttttaaacaaatctttgacaaattggctTT
TCTTTCTGTTcaaatatatgcaaatcacgttgaaaaaagaatatatttct
gcctttactttcactttcgcttttgtgttacgcgattccaattggatgaa
taccgctcgctaacaaattctgattggctgtaagtctttagcttcaggat
tctgattggatcatttcccgcgtcacggttgaattttgattggttgaaag
tttctgagcgtgaattctgattggatgaatatctgaaaagtaaacaatag
tatgtaagtattttgcttatcaaaacctaaagatttccagggggtttaat
ttactttgcatgacgataattaagcctacaaaacatcgagaaaaaaaccc
aacatagaacaggtgtattttgtaatgtagaatatgatagcgtgaatctt
tttgaaattctatgtcaggattttttctcaatgNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAAAATGGGCCATTTATTGACCTTTCAAGA
ACCAATATCTTTCCAGCACATTCACAAAACCCTGTGATGTTATATatcat
tgaaagcaaaattttaaatagaTTCTAAATATCTAACTTTCAAAATTGAC
AACTTTGTTGGGTGAGAGCTATAGTGCTTTAAGTAGTTTTTTCAACAGCt
gggacgagctttttgcttattgctaaatggtggccgaattgccgtccccc
ATGTTTTCTCacatagtcccaagttagacagctaattacactaggaaatc
tagctttcagaaaaattgacatcagtcatctacaggatgtaattgcaaca
acaaagatgagagttacctgaatcaagctcaagttcccaagacaattaat
taaaacttgaaaacttaaaatgagacaaaatgagacaaaatgaccgattg
cgaacgtgcagcagccagaatatcaacaagccaaattttgtcattcaatt
cctgagacagcgcttcaacttttaaggccttgtttatacgctaaagtaaa
aataattccgcaagaagttttgcggcgcatttttttgcttgcgagtcaag
taaacgatatagcgctttcgcagcattaatctttgatacgcattttggcg
ggaagctagtgtgactaactgttagagcagttgactgtagtttcccccct
cttttttgcttttcccccagaaaattctgaaaatatcagttcccccatat
acccatataaatttctcaaatttcaacctgacacaaacgtaaaattttgc
tgcaatttttcaatcatgatctaatcacatgatatcattTTAGCTTGAGT
AAACGGAGACCTgctgtatatttttggaaagctctcaaaaaattttgaaa
ttagagatatattgcgagtataggtaaTTTCAGTACCCAACTCatgatat
tgagcttcaaaaagcgtaaaagctgaaaaaaaaacagttgtttctggctg
aaaacacTATTTTTAATTTGGActttaatttcttcttttaattttgacac
ccttctttaaagataggaatgATCAGAAGGTCTggatcactgatagacaa
aagacTTTTTTCAATCTGATAGCTAAAAGCAATGGGGAAAGAGTTTCCAT
CAGCAATTGcaaccttcctattatttcttTCTGTAAAGAAGAGTTTCGAA
ATTAGTAGAGGGATGTcggcattagaccaacttacagtatctGGTCTGCA
AAGCTACGAGTagattttttaaacagcttATTTAGAAGCTTTTATTTGTa
aacattttaaagaccagCTATGCCAGAATCAGACAAGGCATGCTGGCATT
ACATGAAGTTACGATAAAATTTGTGTCCTGTCGTCAAGTCATCGaaccaa
aaattggaaaaaactggttttgaacagtttctgatcctaaagtaaagagc
tattttttgtaaaagctgtgCAATTCATGTGTGGATTGCATATCCAATCA
GTTGCCTAGGTTTTCAGTAATACAAACAGGGACGGTTTCAAGTATTCTTT
AAAGCCCTATGACCAATCCACCCCTTAATAATTAATTAAGATTGTAAAAA
TTAATTGTTACTACTAATCAGATTGGTAAACTATGTCTATGacagcaaac
tttttttttacttcagagTGGTCAATATAATGAAGATATGATTCCTACAG
TTGGTTTTAACATGCGTAAAGTTACAAAAGGAAATGTTACAATAAAAGTA
AGTACGTGTGATGGTGATAAGTTCATTCATGAAAATTGTGTTATTATATT
TTGTTCATTTCTCAATCAATGAAAGACTCAGATTTTAAAAGTAAGACTGC
GGTAACAAGATAACTTCTAgcacttttaaaaaatgaagttaaAAGTAAGT
AAATCCTGTCAAGATTTTTTCTTATTGCTGTTCCTTGAAAGAACTCTCCA
AGGGAATTCAGTTACCTAAAAATGACCTTTTCGCCATCTTAAGACCAGtc
tgattttcaggtacttcttttttaaattgattttcctAAGGATTGCATAC
CTTTTGTGTTATATTGTCATGCAATGTATTGGTGAGTGTCGGTAATATAT
TGTAAAGATCTCATGATATCATTAAAGGTGTCTACAAAATTGCTGgcata
aattattttggtaataaattAGAGTTTAGAGTTTTGTTTGAACCATCTCA
TTCTCTTGTGAATTTAAAATCCTATCAACTAATtcgttttgtttcatttt
tccagctTTGGGATATTGGAGGTCAACCACGATTCCGAACCATGTGGGAA
CGATATTGTCGTGGAGTAAATTGCATAgtgtatgttttttttctcataaa
aacaCAAAGTAATGATCTGATAACTGTTATCCCTtccttttcttttgatt
tgcaTCAAAACAATCGTTAAAAAAAAATAGTGCGTTTTCCACATCCCCTT
AACAAAAATCTGACCCGTAAACCCAGTTGAAACCTCTTACTCCTATAAAT
TACCAAGATGTACACCACCATTaaccattaatttttttctcaatagaTAT
ATGGTTGATGCAGCCGATCACGATAAAACAGAATTAGCAAAACAAGAATT
ACATGGATTATTACAAAAACCACAACTCGCTGGAATCCCTGTAAGTTAAT
GATTCCTTTGTTAAATGCACTGAGCTTTATATAATATAGACCCTGGACAA
AGTgactcaatcccggccaagcaacaaaatagagttttttaaagtAGTAC
CCTAATGGTATCACTACTaatcaatagcggtgtaaatgcattgagatcgc
tagatctacttttccttggATGCTTTTAATGATTGCAGCACCAATGTAAA
ATGTTTaccactgcaatggcttctttgcgggtaccacttagaaaaaactc
tgatcaaaaatggcggatgtagctttgtccagggtttataaaggtcagtg
gttaaaTGTTTAGTGCAACAAGGTCAAAAGATTGAGGACTGAAGTGAGAT
TTATTACCACTTTTGAGCcgtcaacttttgaaaaaatatttgtttctaaa
tgggttttggtaggatttcatTTGGTTTGTTTCAGATGCTACCAAAAGAG
AATTCTGTGTTATCTTATCTCTGCCATTCCCCTCACATAGTTACCGGGAA
GTAAAGGGGTTATATGCTTTTCGATGGCCAGCAATCAATTCTGTGATGAG
GAAGGGCTTGAGAGATGAGAAATTAAACTCTCCCTCTACGTCGTCAAATA
CCAGGACTGATAGATTTAGCAATTATGTGCAATTTTCGTATCGTGaatct
tcaaagaaattttcttgCCTCTATTTAAtcaatgaaatatttataaTTTG
TCTTAATACTTTTCTTTAGATGTTGGTATTGGGAAACAAGAGAGATTTAC
CAAACGCATACACTGAAAAAGAActcatcgaaaaattgtaagTATTTTTC
AAGACACGTGTATTCTACTAGCAATGATTGTCCAAAACTTTTGTATGCAG
TTAATTTGAACGAGGAatttaatttgttcgaattacagaaagattcgaat
tatagaaagcattTACTCTTTGACAGAGAATTACTTCGAACTATAGAGAG
ATTCAAATAGTAGAAGTTCGGATTTATTCTTGACTCTGAAAGGTTTAGTG
GTGCCTTATTTTAGCTTGGTTATCTTCCTACATAGCTCtactatatattt
ttttttcgttcggaTAAGCTCCACTGCTGTACATTTTTCTTGTAACTCGA
TTGTCATATTATTCACTTGCTTCCCCTTCCTATTTTTGGTCAATCGGAAG
TTCAAATCTGttttattgatttaattatctttaaaaaataacacACATTT
CCCTCAATATGTATTTTTTGATCACATTTTCTAAATTGTTTTTTAACGTT
TgttttagaaatttgggaacTGTGCAAGATCGCGAGATTTGTTGCTACTC
AATATCCTGTAAAGAACGAGATAATATcggtaaaactttttttttacata
acaATTTCTAGTGAATTCAATAATAATTCACAAAGAAACTGAACAAAGTT
CAttacaaaaagtttttcatgtAGATAAGGCCCTACATACAAAATAGATA
GATAATGTTTAGCATGTAAAGTATACTTTAACAAGGGTGGTTGAATAAAT
TGAATTTTCCACAAATgaaactaaattgaaaattattattcGTCTATACG
GGTTAACTTTTAAGAAGCTATCTTGATAATGAGACCATGGCTAATTTTAT
TCTTTGATTATTGAAGCGATTTAGCTCGTACAGTTTGTCCTTTATGACAA
GTGAAGAATAGGGGCCTTCGACGATTTAGAATCTCACTCTGCAAATGTAA
GTTGGTAATTCTAAtgaaatgttctttttaaaTTCTCAGATATCACATTG
CAATGGTTAATCCAACACTCCAAATCGAGGACTTAGGACATCCATCAACA
ATACCTCCAATGTTATTATTGGTTCTGGTGTAATAATCcgatttcaaata
tttcttattttgtgcattttttgaaaacatagaATGAATTCAAATTGACA
GAAGCCTCCTTTTTATAACGGGCGGCACGCCACTACACTACACTATAAAC
ATCTAAAATGACACCtttaatgcaaaaaaaatattcatttcattttactt
tttatttctttttgtcaattttttggcAATAGTTTACTGAAGTCGGGTTG
cagttttgtttgatttttactatctttcatttgagaCTTTCGATGATGAA
TGAATTATTTAAAATCATCAACAATGCAAGGGGGTTGCGTTTGAATTTAA
CAGAGTGGAATAACGTCAAATCCCTGTATCTGTGACCACATCAATGAAAT
AACTTCAGACATTTGAACGTCCCTTCTACTAATGGAGCCTCGAATCTAAT
CCGTTTCATATACTGTACCT

Coding sequence (CDS) from alignment at sc0000122:371415..392984+

>TCONS_00011201 ID=TCONS_00011201|Name=TCONS_00011201|organism=Clytia hemisphaerica|type=CDS|length=3885bp|location=Sequence derived from alignment at sc0000122:371415..392984+ (Clytia hemisphaerica)
ATGGCCTTCGTTCAAAGGTTTATCGACTGGATCAAAAGTCTTTTTTGGAA
GGAAGAGATGGAGCTTACTCTTGTTGGTCTCCAGTTTTCCGGAAAAACTA
CATTTGTCAATGTTATTGCGagTGGTCAATATAATGAAGATATGATTCCT
ACAGTTGGTTTTAACATGCGTAAAGTTACAAAAGGAAATGTTACAATAAA
ActTTGGGATATTGGAGGTCAACCACGATTCCGAACCATGTGGGAACGAT
ATTGTCGTGGAGTAAATTGCATAgtaTATATGGTTGATGCAGCCGATCAC
GATAAAACAGAATTAGCAAAACAAGAATTACATGGATTATTACAAAAACC
ACAACTCGCTGGAATCCCTATGTTGGTATTGGGAAACAAGAGAGATTTAC
CAAACGCATACACTGAAAAAGAActcatcgaaaaattaaatttgggaacT
GTGCAAGATCGCGAGATTTGTTGCTACTCAATATCCTGTAAAGAACGAGA
TAATATcgATATCACATTGCAATGGTTAATCCAACACTCCAAATCGAGGA
CTTAGATGGCCTTCGTTCAAAGGTTTATCGACTGGATCAAAAGTCTTTTT
TGGAAGGAAGAGATGGAGCTTACTCTTGTTGGTCTCCAGTTTTCCGGAAA
AACTACATTTGTCAATGTTATTGCGagTGGTCAATATAATGAAGATATGA
TTCCTACAGTTGGTTTTAACATGCGTAAAGTTACAAAAGGAAATGTTACA
ATAAAActTTGGGATATTGGAGGTCAACCACGATTCCGAACCATGTGGGA
ACGATATTGTCGTGGAGTAAATTGCATAgtaTATATGGTTGATGCAGCCG
ATCACGATAAAACAGAATTAGCAAAACAAGAATTACATGGATTATTACAA
AAACCACAACTCGCTGGAATCCCTATGTTGGTATTGGGAAACAAGAGAGA
TTTACCAAACGCATACACTGAAAAAGAActcatcgaaaaattaaatttgg
gaacTGTGCAAGATCGCGAGATTTGTTGCTACTCAATATCCTGTAAAGAA
CGAGATAATATcgATATCACATTGCAATGGTTAATCCAACACTCCAAATC
GAGGACTTAGATGGCCTTCGTTCAAAGGTTTATCGACTGGATCAAAAGTC
TTTTTTGGAAGGAAGAGATGGAGCTTACTCTTGTTGGTCTCCAGTTTTCC
GGAAAAACTACATTTGTCAATGTTATTGCGagTGGTCAATATAATGAAGA
TATGATTCCTACAGTTGGTTTTAACATGCGTAAAGTTACAAAAGGAAATG
TTACAATAAAActTTGGGATATTGGAGGTCAACCACGATTCCGAACCATG
TGGGAACGATATTGTCGTGGAGTAAATTGCATAgtaTATATGGTTGATGC
AGCCGATCACGATAAAACAGAATTAGCAAAACAAGAATTACATGGATTAT
TACAAAAACCACAACTCGCTGGAATCCCTATGTTGGTATTGGGAAACAAG
AGAGATTTACCAAACGCATACACTGAAAAAGAActcatcgaaaaattaaa
tttgggaacTGTGCAAGATCGCGAGATTTGTTGCTACTCAATATCCTGTA
AAGAACGAGATAATATcgATATCACATTGCAATGGTTAATCCAACACTCC
AAATCGAGGACTTAGATGGCCTTCGTTCAAAGGTTTATCGACTGGATCAA
AAGTCTTTTTTGGAAGGAAGAGATGGAGCTTACTCTTGTTGGTCTCCAGT
TTTCCGGAAAAACTACATTTGTCAATGTTATTGCGagTGGTCAATATAAT
GAAGATATGATTCCTACAGTTGGTTTTAACATGCGTAAAGTTACAAAAGG
AAATGTTACAATAAAActTTGGGATATTGGAGGTCAACCACGATTCCGAA
CCATGTGGGAACGATATTGTCGTGGAGTAAATTGCATAgtaTATATGGTT
GATGCAGCCGATCACGATAAAACAGAATTAGCAAAACAAGAATTACATGG
ATTATTACAAAAACCACAACTCGCTGGAATCCCTATGTTGGTATTGGGAA
ACAAGAGAGATTTACCAAACGCATACACTGAAAAAGAActcatcgaaaaa
ttaaatttgggaacTGTGCAAGATCGCGAGATTTGTTGCTACTCAATATC
CTGTAAAGAACGAGATAATATcgATATCACATTGCAATGGTTAATCCAAC
ACTCCAAATCGAGGACTTAGATGGCCTTCGTTCAAAGGTTTATCGACTGG
ATCAAAAGTCTTTTTTGGAAGGAAGAGATGGAGCTTACTCTTGTTGGTCT
CCAGTTTTCCGGAAAAACTACATTTGTCAATGTTATTGCGagTGGTCAAT
ATAATGAAGATATGATTCCTACAGTTGGTTTTAACATGCGTAAAGTTACA
AAAGGAAATGTTACAATAAAActTTGGGATATTGGAGGTCAACCACGATT
CCGAACCATGTGGGAACGATATTGTCGTGGAGTAAATTGCATAgtaTATA
TGGTTGATGCAGCCGATCACGATAAAACAGAATTAGCAAAACAAGAATTA
CATGGATTATTACAAAAACCACAACTCGCTGGAATCCCTATGTTGGTATT
GGGAAACAAGAGAGATTTACCAAACGCATACACTGAAAAAGAActcatcg
aaaaattaaatttgggaacTGTGCAAGATCGCGAGATTTGTTGCTACTCA
ATATCCTGTAAAGAACGAGATAATATcgATATCACATTGCAATGGTTAAT
CCAACACTCCAAATCGAGGACTTAGATGGCCTTCGTTCAAAGGTTTATCG
ACTGGATCAAAAGTCTTTTTTGGAAGGAAGAGATGGAGCTTACTCTTGTT
GGTCTCCAGTTTTCCGGAAAAACTACATTTGTCAATGTTATTGCGagTGG
TCAATATAATGAAGATATGATTCCTACAGTTGGTTTTAACATGCGTAAAG
TTACAAAAGGAAATGTTACAATAAAActTTGGGATATTGGAGGTCAACCA
CGATTCCGAACCATGTGGGAACGATATTGTCGTGGAGTAAATTGCATAgt
aTATATGGTTGATGCAGCCGATCACGATAAAACAGAATTAGCAAAACAAG
AATTACATGGATTATTACAAAAACCACAACTCGCTGGAATCCCTATGTTG
GTATTGGGAAACAAGAGAGATTTACCAAACGCATACACTGAAAAAGAAct
catcgaaaaattaaatttgggaacTGTGCAAGATCGCGAGATTTGTTGCT
ACTCAATATCCTGTAAAGAACGAGATAATATcgATATCACATTGCAATGG
TTAATCCAACACTCCAAATCGAGGACTTAGATGGCCTTCGTTCAAAGGTT
TATCGACTGGATCAAAAGTCTTTTTTGGAAGGAAGAGATGGAGCTTACTC
TTGTTGGTCTCCAGTTTTCCGGAAAAACTACATTTGTCAATGTTATTGCG
agTGGTCAATATAATGAAGATATGATTCCTACAGTTGGTTTTAACATGCG
TAAAGTTACAAAAGGAAATGTTACAATAAAActTTGGGATATTGGAGGTC
AACCACGATTCCGAACCATGTGGGAACGATATTGTCGTGGAGTAAATTGC
ATAgtaTATATGGTTGATGCAGCCGATCACGATAAAACAGAATTAGCAAA
ACAAGAATTACATGGATTATTACAAAAACCACAACTCGCTGGAATCCCTA
TGTTGGTATTGGGAAACAAGAGAGATTTACCAAACGCATACACTGAAAAA
GAActcatcgaaaaattaaatttgggaacTGTGCAAGATCGCGAGATTTG
TTGCTACTCAATATCCTGTAAAGAACGAGATAATATcgATATCACATTGC
AATGGTTAATCCAACACTCCAAATCGAGGACTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006275XLOC_006275Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011201-proteinTCONS_00011201-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011201-exon-sc0000122-1491911889:371415..371699TCONS_00011201-exon-sc0000122-1491911889:371415..371699Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:371415..371699TCONS_00011201-exon-sc0000122-1510915933:371415..371699Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:371415..371699TCONS_00011201-exon-sc0000122-1575043694:371415..371699Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1491911889:389731..389811TCONS_00011201-exon-sc0000122-1491911889:389731..389811Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:389731..389811TCONS_00011201-exon-sc0000122-1510915933:389731..389811Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:389731..389811TCONS_00011201-exon-sc0000122-1575043694:389731..389811Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1491911889:390320..390393TCONS_00011201-exon-sc0000122-1491911889:390320..390393Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:390320..390393TCONS_00011201-exon-sc0000122-1510915933:390320..390393Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:390320..390393TCONS_00011201-exon-sc0000122-1575043694:390320..390393Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1491911889:390611..390704TCONS_00011201-exon-sc0000122-1491911889:390611..390704Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:390611..390704TCONS_00011201-exon-sc0000122-1510915933:390611..390704Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:390611..390704TCONS_00011201-exon-sc0000122-1575043694:390611..390704Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1491911889:391434..391501TCONS_00011201-exon-sc0000122-1491911889:391434..391501Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:391434..391501TCONS_00011201-exon-sc0000122-1510915933:391434..391501Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:391434..391501TCONS_00011201-exon-sc0000122-1575043694:391434..391501Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1491911889:391973..392043TCONS_00011201-exon-sc0000122-1491911889:391973..392043Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:391973..392043TCONS_00011201-exon-sc0000122-1510915933:391973..392043Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:391973..392043TCONS_00011201-exon-sc0000122-1575043694:391973..392043Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1491911889:392454..392984TCONS_00011201-exon-sc0000122-1491911889:392454..392984Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1510915933:392454..392984TCONS_00011201-exon-sc0000122-1510915933:392454..392984Clytia hemisphaericaexon
TCONS_00011201-exon-sc0000122-1575043694:392454..392984TCONS_00011201-exon-sc0000122-1575043694:392454..392984Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:371415..392984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
246.347	248.19	333.833	340.427	167.717	123.755	140.55	142.653	133.016	121.553	118.127	100.021	73.4413	62.3553	96.7791	99.3611	104.177	98.1355	60.3039	94.8737	85.5651	83.4377	122.116	124.996	92.1838	106.291	116.997	97.5213	141.759	119.391
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Blast
[Close]
BLAST of TCONS_00011201 vs. Swiss-Prot (Human)
Match: ARL8B (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 5.051e-112
Identity = 149/183 (81.42%), Postives = 167/183 (91.26%), Query Frame = 1 
Query:  166 MAFVQRFIDWIKSLFWKEEMELTLVGLQFSGKTTFVNVIASGQYNEDMIPTVGFNMRKVTKGNVTIKLWDIGGQPRFRTMWERYCRGVNCIVYMVDAADHDKTELAKQELHGLLQKPQLAGIPMLVLGNKRDLPNAYTEKELIEKLNLGTVQDREICCYSISCKERDNIDITLQWLIQHSKSR 714
            +A + R +DW +SLFWKEEMELTLVGLQ+SGKTTFVNVIASGQ++EDMIPTVGFNMRKVTKGNVTIK+WDIGGQPRFR+MWERYCRGVN IVYM+DAAD +K E ++ ELH LL KPQL GIP+LVLGNKRDLPNA  EK+LIEK+NL  +QDREICCYSISCKE+DNIDITLQWLIQHSKSR
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSR 184
The following BLAST results are available for this feature:
BLAST of TCONS_00011201 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARL8B5.051e-11281.42ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
back to top