TCONS_00011196 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011196
Unique NameTCONS_00011196
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2672

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011196 ID=TCONS_00011196|Name=TCONS_00011196|organism=Clytia hemisphaerica|type=transcript|length=2672bp
TTAATGCATACCCGTTTTGCTCTGCGATACGAAGCACCACGTAGGAGGTT
CAAGATGTCGAAAGTGTAGATAAAAGGCGGCTTTTTCATCTAGGATCACT
CCAAGCAAATCACGCACGTTGCAAGACTTTGCTGACTGACTGGCGAGGAA
CAAAGAATTCAAGTACATTCTTGAAATTGGAAAACAACAAACTTATTACA
ATGGCTGAATTATATCACTGCCCAGACCAaaagaaaatccaaaacttgaa
aGATGTTGCCAACAAACTTCGAATTTTGAGCATCAAATGTACAAATGCTG
CAGGATCTGGCCATCCCACATCATGCTGCTCGATGGCTGAGCTCACATCT
GTTCTTTTCTTCCACACCATGAAGTACAAAGtaagCGATCCAAGAGATGC
ATCCAGTGATCGATTTGTCTTATCTAAGGGTCATTCTGCCCCAATCCTCT
ATGCTGCTTGGTGTATGGCTGGTCTCTTCAGTGAAGACGAACTTATGCAA
TTACGAAAACttggaaatgatttggaagGCCATCCTACACCAAGATTGAA
CTTTGTTGATGTGGCCACTGGATCTTTGGGTCAAGGTCTAAGTTGCTCTG
CTGGTATGGCATACACTGGAAAATACTTGGACAAAGGAAGCTACCGTGTT
TTCTGTTTGATGGGTGATGGTGAAAGTGCTGAAGGTTCTGTCATGGAGGC
TGCCAACTTTGCTGGGTACTACAAATTGGACAACTTGGTTGGTATCATTG
ACATTAATCGTTTGGGACAAAGTGACCCAACCTCATTACAACACGAAATG
GATGTTTACCAAAAGAGATGGGAAAGCTACGGGTGGAATGCCATTGTTGT
TGATGGACATGATATTGAAGCAATTTGCCGTGCTTACTTTGATGCTGAAC
AAGCAAATGGGCGACCAACTATGATCTTGGCAAAGACATACAAAGGAAAA
GGTGTTCCTGGCGTTGAGAACGAGATGAACTGGCATGGAAAAGCTCTCGG
TGCCAAAGCTGATGATGCTATCGCTGCTATTGAAGCTCAAATGGTCGACA
AGAATGTATCTGGCGAGAAATTGAACACTCAAGTGGTTGTGGATGACGTC
AAGCCCGTTGACCCGTCAGCCATCGTGCTGTCAGAGAAACCATCATACGC
AGCTGATGCCAAAGAGGCTACCCGAAAAGCTTATGGTCTCGCATTGGCTA
AATTGGGTCGATCTTCAGACCGTGTAGTTGCCCTTGATGGTGATACCAAG
AACTCGACTTTCGCCATCACCTTCCAAAAAGAATTCCCAGACCGTTTCGT
CGAATGCTTCATTGCTGAACAAAACATGTTGGGCGTCGGTATGGGATGCG
CCACAAGAGACCGCACGGTGGCGTTTGCAAGTGCCTTTGCCTGCTTCTTG
TCCCGTGGGTACGATCAAATCCGTATGGGTGCTATCTCTCAAACTAAATT
GAAAATGGCTGGCTCACACGTTGGTGTCTCTATTGGTGAAGACGGTCCAT
CTCAAATGGCTTTGGAAGATCTCGCCATGTTCCGCGCCATCAACAACTGC
ACTGTTTTCTATCCCTCCGATGCCGTCTCGTGCGAACGCGCGGTCGAATT
GTGCGCCAACACACCCAACATGTGTTACATTAGAACTAGCCGACCAGCTA
CTTCTATCTTGTACGGTGCCGATGAGGTCTTCGAAGCCGGCAAAGGAAAG
GTCGTTAAACAAACAGCTTCAGATTTCTGTCTCTTGATTGGTGCTGGTGT
AACACTTCACGAATGTTTGAAAGCACACGAAACTTTGAAAGCTGAAGGTA
TCAATACTCGTGTCTTCGATCCTTTCTGTATCAAACCATTGGACGTCCAA
GGAATCATCGCAAATGCTAAAGCTTGCAATGGAAATATTGTCACCATTGA
AGACCATTATCCAGAAGGTGGTCTTGGTGAAGCTGTTCTGTCCGCTGTCG
CCATGGAAACTGGAATTCGCGTCCAACGATTGGCTGTCACTGGTTTGCCA
CGCTCAGGTCCATCCGCTGCTTTGATGGAAATGTTCGGAGTTTCTGCCAA
ACAAGTCGTCGAAGCTGTCAAGAAATTCTAATAAGTTGTTTGGCTGTCTC
GCGTAGAGATTAATGTGACCGCGCTTTCCGAGAGCGTTTCCTACGAGATG
AGATATGGGGATATGTACTGAACTAAATGAGATAGATATTATATAAAGCT
GTATTTAGCGTAGATGTGAACTGTCTTTTCCCTGTGTATCGTTCCAATGA
ATAAATGTTCTGGGAAAATTGACAAACGGGGCAAAAGACACGGTATTCTA
CGTTGAATAGCATTTAACTACCTATGAATAATCTTAAATTGTCAAAAACG
ATTTAGTTCAAATTTACATAGTCTGATAAAATGGACTTCGTTCAGTTTTA
TGTTACTTTTTGcgtgattttattttttcgacttttatttatattttggt
atttttgctTGATCTTGTAAAACGGTAAATTggcttttgtaagatttttt
gtGATCGAGGATGTAATTTTTTATGCTTGTTTTACTTTTCTGTGAAAACA
GAACGGAAAGAAAAAGCAATAGATGATGTTATAGAATACTTTGTATCCAT
TCATTCATTAATATGCTTGATAGCAATGATAACTTACTATCAACCTCAAT
TGAAAATGTTGTATCGTTGGAA
Run BLAST on NCBI

transcript from alignment at sc0000122:340615..351793+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011196 ID=TCONS_00011196|Name=TCONS_00011196|organism=Clytia hemisphaerica|type=transcript|length=11179bp|location=Sequence derived from alignment at sc0000122:340615..351793+ (Clytia hemisphaerica)
TTAATGCATACCCGTTTTGCTCTGCGATACGAAGCACCACGTAGGAGGTT
CAAGATGTCGAAAGTGTAGATAAAAGGCGGCTTTTTCATCTAGGATCACT
CCAAGCAAATCACGCACGTTGCAAGACTTTGCTGACTGACTGGCGAGGAA
CAAAGAATTCAAGTACATTCTTGAAATTGGAAAACAACAAACTTAGTAAG
TATATTTCTTCATACTATTTGTGAATGTTGGAAGGTTATTGAAAGACTTC
TTATCCTCTATATTTTGCAACCatgtttgaattttgaaggacTCTCTAAG
TTTCAAGACATAAGCGATAAGCTAATTATATTACCAACAAGTTTTGAGGC
TTCATTTCTCTACTATGCTGAAAAAGCAGAATAAACTGGAGTGCTAAAAG
GGgagagttattttttcttttgtttaaaaaaacttgCAAGAAAATAGTTT
AGATTATACATAATTCGGAGTTCAAAATTAGGCAACCcctttatagtatt
tttagacGGTCCCTGTTTGAAAAATAGTCTAGGTGGCAGGCCCCTAAGtt
ccagacaatctcaatcaaaAGGAATTAACAACCAGATCATACACAAATGC
CATTGAAATTCAATTATGTTTGATGACATTTAAAGATGTGTTCGATTGCA
TTCTAGTGAGATTGCTTGAGTATGgggtatagaccttttcgccagAAGCA
GCTAAATGCCAAGAAAACGCAAGTCGTCATTTTCCCcgaatttcccgatt
tcccgatttaaATCCGAAATCGGGTAGTATATCATTTCGggattcacttt
cgttttcggacttAGTGattttttcagactttttctcAGGAACCTGCAGG
AACTCCAATCATCTCTTGGTTTACCATTGAGCCCTTCTTTTTTTAAGTGT
CCGTGAATTAGGTTTATCGCCCAAAGTTAACAATTTAGCCTCACTCTGTA
TAATTCAGGATTTTCTCTGTCACACGTATACGTCGAGCCAATGTTGAAGT
TAGACACGTTATAGTTATTTTATAATGAAAAGCATGTAAATAGTAATTTG
CGTCTTCTCGTGATATCACTTTCTCTTTGATTAAAAGCTAAGATCTGAGA
TGACGCAAATAACTCTCCCGAACAAGtccgaaaacaaaagtgaatcCCGA
AATGATATACTACCCGATTTCGGATTTAATCAGGAAATCTGGAAATTTGG
GGAAAATGGCGACTTGCGTTTTCTCGGCATTTAGCTGCTTctcttttcgc
ctttccatctgccatcttgaattgtatgcaaaaatagaggaacaaaaaag
ctgtggttggatttagttggaaaatatgcaaaacatatgcaagtttacac
aaagattaaaaagacaacaaagcatcttataattaaagaaatattataat
cattagaacaataaaagatggaatttcttaatccaaaaagaattaattac
agaacaacaaaagccttttagaaattttttctcaaacacattgcatattc
tgttttcatgccattaaaaaattccaccaagacggagtacacGCATCAag
ctttcaaaacacgcaaactgaaagcagttaattatgacgtcacaccttca
gcgggttcagatcaatgttttgatttgatcgtctgccgtttctattccca
ggagaataatctACCGTCAGCCAGCCAAATAAGGATGATTTTTGTATCTT
CGCGGCTGATTTTTtagtttgagtttatgtctaatgttatggttttttga
agtgcttgttctaagagatgagcgaatttgacaatttctagttttcaaaa
gaagtagatttaatctttcttctacaagattacactttataATAATGCCA
ATGATgcaagttttatattaatattttctttttgcatatgtgtTGCATAC
TTTCTAAAGGAATTTCACCACAGCGATTCGGCCatcataatttttgcata
caattcaatatggagGATGGAAAGGCCAGTGTACAGTGCTAACCTTTCAT
TACAGTCCCTCAAACGTGTACAAAAAGTGTTGAATAACAAATTGGTTTCC
Tacaagggtcataaattcttgaaatttagataaaatttgaaaattttgac
tgACATTTTTGggaaatagtctctctaaggtggcaaaaatggacaaaaaa
ttcaaaatttaatctcTCTAGGACATACCTATCTCGCAAACCCAGTACTC
TGAGTGACTTTAACAGTGTACAATattgaagggggggggggcatgacTTC
TGGAAACCtaaaaaacaaaagtactttAGTACAGTacctgtaagggttgg
aaaaatcagaaaatcaaactttagttccactaagggttggaaaaatagga
aaatttgaactttgaaatttgttcaaattagtCCAGCAAGTAAGGGTAGT
TTTTTTTTGCTCCTTTCTAGTCGGGCTGCCCATTGCGTCAGCTGGCAACC
CTAGCACTCCTCTTTGATTATACTAAAGTGAAAGAAATGAATAGACAAGG
CAAGGGTTTGTGCTGTGGGCGAAAATGTTAGTCATATTTATTTGTGGGCA
GACCAGTTTCCATGCCTTTTTAGTGTCTggttatcggacgctgcccttaa
agaattgtgaaaataatggtgaaaaaagccttttttgagaaaaaatatta
gaaaagtgccctttttgatGCCTAgtggacaaaaagtgagggaaataccc
aaaagacacgctgattttgttcCTGAGATAATCGAGCAAAATTGAtgcga
atcaattttgctccattgtctcAGGGACAatagtgagatttcactttgaT
TGGTAAAAAGAAAAGTGGCGTTGAGACAGGAGAAAGCGTTTcatgttggt
gggatggagcatgttgcattggaccaacgcgaaaaaaacttcgcGTCCCC
AAGCCTTAATTCTTGTTGAGTTTATGCAAATAAATACATAGAAATGAAAA
ATAGCTGAGCAGGTGGCCTGACCTAGGGTTATTTCTAGTACCAGTTGTCA
TGGAACCCTTCACCTGAAGGGAAATATGGGGTACAttattttattgttgt
tttccCCAAGAAAATGAGATTACTTCTAATGGGATGTCATCTTAATCTGT
TTCAAAATTATTGCAATTAAGTAAAGAATAAGATTACATTTACagtataa
atttaaatttttttcttacagTTACAATGGCTGAATTATATCACTGCCCA
GACCAaaagaaaatccaaaacttgaaaGATGTTGCCAACAAACTTCGAAT
TTTGAGCATCAAATGTACAAATGCTGCAGGATCTGGGTAAGAAATTTTTG
AttgctttatttcattttgGAACAGTTataaccaatgaagtataagcctg
aagggctagaagtcaatctcctcggtaggatttgaagccaaccaaactaa
aatttaccgctaaatttcgaaaaaaatatcaatcgtaaacaaaggaattg
ctagattcaatctgttgtCAAAAatgcagcgcattttttatttttaaggc
ttcactttttcttgcctgagaaaggttagagattgaacttcTAGCCCTTt
tggctttaaactcaatggttataaCCTTATTTCAATATTTGAAGTGCATG
AATCAGAACACCTATATAAAATCTTTTCTTTCAACTATCAACAAAATTTT
CCTGTGGGGAATGATGATGGATTCTTAAATATAATATTGTAATTAGTCGT
AAACAATGTTTTTGGACAGACTTGAGCCATAGTCAATGTTGACCTTACTT
TTGCCTTTCGTACATATTTGTTATTATGGAAGGTAATATGTTGACTCAAC
CATTTCTTTCAGCCATCCCACATCATGCTGCTCGATGGCTGAGCTCACAT
CTGTTCTTTTCTTCCACACCATGAAGTACAAAGgtattattttgtttgtt
tctttatGTATTGAAAATTTAGAATTAACCCTTTCCTTTGCATTTTCCAC
AATTTGATAGTTGATTGTAAAAAGTTGATCAACTAaaacagtgctgcaaa
taacagCCGATAATCGGTAAATACCggtcattttgtagtttctacGGGCC
ATTCTGAAGctaagtttttcattttgtccggttaaaatttgATGATTAGA
GGCTAAGATAAATACTTAGCGCTTGTAACTAAAAGAGGAAttcattttaa
attaaaatagcTGTTTCTAAAGGTCATTTCAGACAAAATTTTCTAAGGGG
TTTCCACCAGACCCCTGCTCTAATCATTCTTGTGAAAAAATTACTGGCCA
AATGAatgaaatttccttaaaaattcctaaaatcttTTCCAGTCTTCTTA
GTGACTTGTGGTAATTTGTGAtgaaataataactgaataaaagggaatca
aaactatgtttttttcattttcagtaagCGATCCAAGAGATGCATCCAGT
GATCGATTTGTCTTATCTAAGGTTAGTTTTCacaatataaacaaaatttg
CTGGTGGATGATGTCAGCTAGCAACCAGCCTTTCTGATTCAGATTTATTT
GCGCTTTGACAAACAATTCTGCGTTCTATGGTACAGTAAGCACTTTTGTG
TCAGCAAAAGCCAAATTAAAGTAAGCATTTGCATTGACAATAGCCGAAAG
CTGACCCAAAATTAAAATGATACGTAAACTTTCTTCACTTTATCTATCAA
GCTGCTTAGCTATGAGTAGAAGCTCAAATTGTGGTTGGTTTACTTTACTT
TCAGCTTGTATGCTACATTCAATAATACTTTGTTCTTGTATTCCATATTT
AGGGTCATTCTGCCCCAATCCTCTATGCTGCTTGGTGTATGGCTGGTCTC
TTCAGTGAAGACGAACTTATGCAATTACGAAAACttggaaatgatttgga
agGCCATCCTACACCAGTATGTTTGTTTCTTTTGTCCATACACTTTTTAT
GGTTTAAAAACTTTACTAAACATTCAATGATTTTAATTAAGTTCAACAAT
ATTATGgtttaatttttaattcaaaattgtTTACAATATTAAGGACCTCt
actttttttaccttttctgaTAGTGCCAgataatacttgtattatataat
atataaataatCAGTTTAATTTAAGGGTCTGAAGATATCTAAGGATTTTA
CTCCCAGTAAGCAAAGGATCTCCACTTAAAGGTTGTGATACATAAACATA
TTGCTTTTGACAATCTAATATTCCCTacacattttcataaatttactaaa
aataggAAATGTTTAATATTGTGAGCCTCTAACATGGCTTcagatttaca
aaaatttggATTCCAAATGAGATTCCAAACAAATTCCAATACATATTCCC
CAAAGAGGAGTCAGCCAATCTCTATTGTTAAAAGGTTAATCCCCTTAGCA
AACAAATTCTTACAATAGAAAAAGGAGATAAGGGCAGTTATTGTGCATAC
GTGCACATTTGAAAGGGGGTGAATTGCAGAAAAATAGTACAATGTCCCGT
CCGCATCAGGCACTTTTTGAGGACCCATAACTCAACTTTGGCAAATGCAA
TTTCTAAGAACTTCACATTTTTGTAGCCTTCCTTGGATTGttatagaatt
tttttgttacagcctcaatcttgagaaaaatgtTGTGTATGGGACACTTT
GTTGCGGACaggacaaaaagtttttcacccATAGCTAGTTACATgtaaag
tcaagaaaaatgataCTGCTGCAAAAGCATGTGGTTCCCTATAGTTCATT
GGCTTGATAAAGTTAGAACATTAAAGTTGtctcaaaaaaagagaaattaa
gACCGTTGCGGACGGGACAAATTTTTGGACCGTATTAGTTTTTAccagtt
aaaaaattaaaaatcttatTTATAGGCAATAAATGTCTTTAACGCAAGAA
GCCATTTAATATGTCACAACAAGACGAAAATGGTGCTCTTCTAGTTCCCA
GATCTTGACTTGTAAGCATAAATGGAGCTTTTGTTGCGAATGGGACATTG
TACTATTTTTCTGCAATTCACCCAAGGATTAAAATGTGATAGAGGAAATG
TCATGGTATAACATCTGTCAGCATTTTTCTTGGCTTCgctatttttagta
attttgTGAAAGTGTAGGGAATGTGTATCGCAACCTTAACAATGATGAAt
gaatgattttgtttttcacaGAGATTGAACTTTGTTGATGTGGCCACTGG
ATCTTTGGGTCAAGGTCTAAGTTGCTCTGCTGGTATGGCATACACTGGAA
AATACTTGGACAAAGGAAGGTAAGAAAACTTTATTGATTCAATGAGCTGT
TCTTCCTACTGTAGTGCATGTAggggtagagcatccagctacggtgcaca
ACACAAgtttgtgggttcaacccccagcctggcagccctgtgaatccagg
tcggcattcggcaatGCCGACCTGAAAGCCGACGTAACTTGCGTGCCGAA
atgattttgtctgaattcacaGGGCTGGCCCGGTCaaaccaaagattctc
aaaatggtactttatgcctctctgcttgatgctcagcaattaagagaagg
gtcaagggtaagtggagcctTCCCCTAGCTCTCGAAGGAAGAGCCTTTGG
GTCATCTCTGACTGTGGTCCCAGACTTACTTACTTCTAAAGCTCAAATCA
GGGGCCgcggctccactttgaaagtgatGGGGCCATGATATACTGAcgaa
ggaggcgccaccatggttggcgccgacgggcgaaaatttttgagttttag
ctcttctagatcgccTAATACAGGTTGGTTTTAAGGTTATTAAGCCAAGA
TTGGCTTGattagtaaattttctttttactttgaaaaaatgtggtcgggC
CAAGGCCCGGGTGGCCCCCCCGGTGCCGCGGCCCAtgcaaatgttttaaa
aatttatagCGTTATAAGTTCTTCTTCTTTGGATTGTTGAACTTTCCCTG
TCTGCAGAGTTTCAGTCTTGAAAAAGACAGGAAAGAAGGAATTTATCAAT
ATTTGGTCACGGCTCATGGTAAAATTACCATTTTGTATTGCGTTATCATT
GTACaccaaattttattatttttacagCTACCGTGTTTTCTGTTTGATGG
GTGATGGTGAAAGTGCTGAAGGTTCTGTCATGGAGGCTGCCAACTTTGCT
GGGTACTACAAATTGGACAACTTGGTTGGTATCATTGACATTAATCGTTT
GGGACAAAGTGACCCAACCTCATTACAACACGAAATGGATGTTTACCAAA
AGAGATGGGAAAGCTACGGGTAGGTAGAATttcattattatcattattga
AATAACAGTTTTTTCCCTTCCGTTTAACCTGAATTTATGAGCACCTATGA
GAGCTCCATCAAGAAGAGCCAGAAATGATTACCTCTAGATTGTCTTCAGC
TGATTGTTTTACTTCATTTCCAATTTCAGGTGGAATGCCATTGTTGTTGA
TGGACATGATATTGAAGCAATTTGCCGTGCTTACTTTGATGCTGAACAAG
CAAATGGGCGACCAACTATGATCTTGGCAAAGACATACAAAGGAAAAGGT
ATAATTATTCAAAAGTGTTTACATTCTACTCAATCCaaaaaaaaccataa
aaaatGCAATACACATTTTAAAGTGATAAGAAgactttttcatcttcttc
aagTCTTAAAAACATTCTTGTCCTTTGAATATCAGGTGTTCCTGGCGTTG
AGAACGAGATGAACTGGCATGGAAAAGCTCTCGGTGCCAAAGCTGATGAT
GCTATCGCTGCTATTGAAGCTCAAATGGTCGACAAGAATGTATCTGGTGA
GTTTCGCTATCTAAATTTCGAAGATTCATGCCCTCCCAGTCAGTTTGCTT
TCAAATAATCGACGCCTTGTTCGTATGCGGTCCAAGCCCTAAGTTGTGTC
ATCATACAGTAAAAATGATTGTTATAGCAAAACCTTTTCTTGCAGGCGAG
AAATTGAACACTCAAGTGGTTGTGGATGACGTCAAGCCCGTTGACCCGTC
AGCCATCGTGCTGTCAGAGAAACCATCATACGCAGCTGATGCCAAAGAGG
CTACCCGAAAAGCTTATGGTCTCGCATTGGCTAAATTGGGTCGATCTTCA
GACCGTGTAGTTGCCCTTGATGGTGATACCAAGAACTCGACTTTCGCCAT
CACCTTCCAAAAAGAATTCCCAGGTTCGTATCATTNGTTGACCCGTCGGC
CATCGTGCTGTCAGAGAAACCATCATACGCAGCTGATGCCAAAGAGGCTA
CCCGAAAAGCTTATGGTCTCGCATTGGCTAAATTGGGTCGATCTTCAGAC
CGTGTAGTTGCCCTTGATGGTGATACCAAGAACTCTACTTTCGCTATCAC
CTTCCAAAAAGAATTCCCAGGTTCGTATCATTGGCTCCATATTTTTATGT
AGATTGGTGACCTTATCAAGCAGAGAATTCACTGAAGTTAAAAACTGTCA
TCTAAAGGCTGTTCATGACATTTATATTATGTATTGAATTTAATTAAAAA
TGATGCACCTGTTTAAATGAGCTATGTTCAGTATTCATTAATACTTTTTT
GTTCCTACTTAAAAGATCAAGTGAAACAATTTTAATTCCAAGCACTTAAC
ACTAGatttttctttaccttttttATCAGACCGTTTCGTCGAATGCTTCA
TTGCTGAACAAAACATGTTGGGCGTCGGTATGGGATGCGCCACAAGAGAC
CGCACGGTGGCGTTTGCAAGTGCCTTTGCCTGCTTCTTGTCCCGTGGGTA
CGATCAAATCCGTATGGGTGCTATCTCTCAAACTAAATTGAAAATGGCTG
GCTCACACGTTGGTGTCTCTATTGGTAAGCTTCGGTTTCTTTATTCTATT
AGAGTCCCACTCCTTTTTCAGGAAGGTGACACTTTTACGCCTAACTTTTA
CGCCTTGTTTTTTTTGGTACTATTAGACCGAAGTATTGCATGTGTAGGTC
TTgatatttgattggttgattgatctTTAGAAGGAAATTTCAGAAGTAAT
ACTTAAATAAAAATTACGACTTACAAAAATTACCTTTTCCACCCgacaaa
atttataaatttgtttttttcaaatcgcATGAGAATCCAGAAATCAAGCG
AAATTcagattggttgaaaaatacgAGAAAGTTGGGCGGATGTATGGTTA
TGAAAAGTTCCTTTCTGTCTATATAGGTGAAGACGGTCCATCTCAAATGG
CTTTGGAAGATCTCGCCATGTTCCGCGCCATCAACAACTGCACTGTTTTC
TATCCCTCCGATGCCGTCTCGTGCGAACGCGCGGTCGAATTGTGCGCCAA
CACACCCAACATGTGTTACATTAGAACTAGCCGACCAGCTACTTCTATCT
TGTACGGTGCCGATGAGGTCTTCGAAGCCGGCAAAGGAAAGGTAAAAAAT
CGTATCATATTTTTGTGTCTTCTCATAAATTTTACTCtcattcaaaaatt
gaaaaataaagccTTTCTCTCGTAGGTTTTAGTGTCAACCTCAAGTTTGA
TTAAAGCAATCCTCAGAAtctggaaaaaaaatcatcctacAAAttgtaat
ataaaaaaaaacgaccTCAAACGCTGTATCAGAATCtgaatattttcagt
tcttgacatatttttcaaaattgttttttaacaGGTCGTTAAACAAACAG
CTTCAGATTTCTGTCTCTTGATTGGTGCTGGTGTAACACTTCACGAATGT
TTGAAAGCACACGAAACTTTGAAAGCTGAAGGTATCAATACTCGTGTCTT
CGATCCTTTCTGTATCAAACCATTGGACGTCCAAGGAATCATCGCAAATG
CTAAAGCTTGCAATGGAAATATTGTCACCATTGAAGACCATTATCCAGAA
GGTTGGTAGATGATTATTGTTGCCTGGTCgacttcaatttttgttttaga
gGAACAGATTTTGTATCGGCCTCGGCCAATCTTTTTAGTAAACTTATGAC
TCATCGGGGCTTTTAGGTTCTGGGATGTCAGgttcagattgttcttaatt
tgttcttgttTTTTGGGATAtttgaaattgtgtttttcaacTAACGATGG
ACTCGATACGTATTACACATTATTGAAGCATCGACAATCCGATTtaagat
tatttttgaaaattcggaCTCTTCAATAGTTTTACAAAAACTCATTTTCC
GTTTTCAGGTGGTCTTGGTGAAGCTGTTCTGTCCGCTGTCGCCATGGAAA
CTGGAATTCGCGTCCAACGATTGGCTGTCACTGGTTTGCCACGCTCAGGT
CCATCCGCTGCTNATTTTCTTGGTAATTTCTGGGATGTCAGgttcagatt
gttcttaatttgttcttgtttttttgGGATATTTCCagtgaaattgtgtt
tttcaacTAACGATGGACTCGATACGTATTACACATTATTGAAGCATCGA
CAATCCGATTtaagattatttttgaaaattcggaCTCTTCAATAGTTTTA
CAAAAACTCATTTTCCGTTTTCAGGTGGTCTTGGTGAAGCTGTTCTGTCC
GCTGTCGCCATGGAAACTGGAATTCGCGTCCAACGATTGGCTGTCACTGG
TTTGCCACGCTCAGGTCCATCCGCTGCTTTGATGGAAATGTTCGGAGTTT
CTGCCAAACAAGTCGTCGAAGCTGTCAAGAAATTCTAATAAGTTGTTTGG
CTGTCTCGCGTAGAGATTAATGTGACCGCGCTTTCCGAGAGCGTTTCCTA
CGAGATGAGATATGGGGATATGTACTGAACTAAATGAGATAGATATTATA
TAAAGCTGTATTTAGCGTAGATGTGAACTGTCTTTTCCCTGTGTATCGTT
CCAATGAATAAATGTTCTGGGAAAATTGACAAACGGGGCAAAAGACACGG
TATTCTACGTTGAATAGCATTTAACTACCTATGAATAATCTTAAATTGTC
AAAAACGATTTAGTTCAAATTTACATAGTCTGATAAAATGGACTTCGTTC
AGTTTTATGTTACTTTTTGcgtgattttattttttcgacttttatttata
ttttggtatttttgctTGATCTTGTAAAACGGTAAATTggcttttgtaag
attttttgtGATCGAGGATGTAATTTTTTATGCTTGTTTTACTTTTCTGT
GAAAACAGAACGGAAAGAAAAAGCAATAGATGATGTTATAGAATACTTTG
TATCCATTCATTCATTAATATGCTTGATAGCAATGATAACTTACTATCAA
CCTCAATTGAAAATGTTGTATCGTTGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006272XLOC_006272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011196-exon-sc0000122-1491911889:340615..340809TCONS_00011196-exon-sc0000122-1491911889:340615..340809Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:340615..340809TCONS_00011196-exon-sc0000122-1510915933:340615..340809Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:340615..340809TCONS_00011196-exon-sc0000122-1575043694:340615..340809Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:343786..343900TCONS_00011196-exon-sc0000122-1491911889:343786..343900Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:343786..343900TCONS_00011196-exon-sc0000122-1510915933:343786..343900Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:343786..343900TCONS_00011196-exon-sc0000122-1575043694:343786..343900Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:344427..344497TCONS_00011196-exon-sc0000122-1491911889:344427..344497Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:344427..344497TCONS_00011196-exon-sc0000122-1510915933:344427..344497Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:344427..344497TCONS_00011196-exon-sc0000122-1575043694:344427..344497Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:344989..345035TCONS_00011196-exon-sc0000122-1491911889:344989..345035Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:344989..345035TCONS_00011196-exon-sc0000122-1510915933:344989..345035Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:344989..345035TCONS_00011196-exon-sc0000122-1575043694:344989..345035Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:345367..345480TCONS_00011196-exon-sc0000122-1491911889:345367..345480Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:345367..345480TCONS_00011196-exon-sc0000122-1510915933:345367..345480Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:345367..345480TCONS_00011196-exon-sc0000122-1575043694:345367..345480Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:346736..346833TCONS_00011196-exon-sc0000122-1491911889:346736..346833Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:346736..346833TCONS_00011196-exon-sc0000122-1510915933:346736..346833Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:346736..346833TCONS_00011196-exon-sc0000122-1575043694:346736..346833Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:347642..347833TCONS_00011196-exon-sc0000122-1491911889:347642..347833Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:347642..347833TCONS_00011196-exon-sc0000122-1510915933:347642..347833Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:347642..347833TCONS_00011196-exon-sc0000122-1575043694:347642..347833Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:347994..348112TCONS_00011196-exon-sc0000122-1491911889:347994..348112Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:347994..348112TCONS_00011196-exon-sc0000122-1510915933:347994..348112Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:347994..348112TCONS_00011196-exon-sc0000122-1575043694:347994..348112Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:348250..348360TCONS_00011196-exon-sc0000122-1491911889:348250..348360Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:348250..348360TCONS_00011196-exon-sc0000122-1510915933:348250..348360Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:348250..348360TCONS_00011196-exon-sc0000122-1575043694:348250..348360Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:348510..348737TCONS_00011196-exon-sc0000122-1491911889:348510..348737Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:348510..348737TCONS_00011196-exon-sc0000122-1510915933:348510..348737Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:348510..348737TCONS_00011196-exon-sc0000122-1575043694:348510..348737Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:349194..349388TCONS_00011196-exon-sc0000122-1491911889:349194..349388Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:349194..349388TCONS_00011196-exon-sc0000122-1510915933:349194..349388Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:349194..349388TCONS_00011196-exon-sc0000122-1575043694:349194..349388Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:349741..349955TCONS_00011196-exon-sc0000122-1491911889:349741..349955Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:349741..349955TCONS_00011196-exon-sc0000122-1510915933:349741..349955Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:349741..349955TCONS_00011196-exon-sc0000122-1575043694:349741..349955Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:350199..350415TCONS_00011196-exon-sc0000122-1491911889:350199..350415Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:350199..350415TCONS_00011196-exon-sc0000122-1510915933:350199..350415Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:350199..350415TCONS_00011196-exon-sc0000122-1575043694:350199..350415Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1491911889:351039..351793TCONS_00011196-exon-sc0000122-1491911889:351039..351793Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1510915933:351039..351793TCONS_00011196-exon-sc0000122-1510915933:351039..351793Clytia hemisphaericaexon
TCONS_00011196-exon-sc0000122-1575043694:351039..351793TCONS_00011196-exon-sc0000122-1575043694:351039..351793Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:340615..351793 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
209.403	185.387	195.997	304.655	28.3524	22.5232	13.4444	33.4825	13.7509	22.4322	22.9428	17.9501	43.9696	65.9056	27.6084	30.7917	37.6662	48.5315	32.2855	74.4838	66.7577	62.4438	111.725	151.748	334.542	275.833	49.1341	67.6421	84.6937	72.7573
Blast
[Close]
BLAST of TCONS_00011196 vs. Swiss-Prot (Human)
Match: TKT (Transketolase OS=Homo sapiens GN=TKT PE=1 SV=3)

HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0
Identity = 367/612 (59.97%), Postives = 455/612 (74.35%), Query Frame = 3 
Query:  207 ELYHCPDQKKIQNLKDVANKLRILSIKCTNAAGSGHPTSCCSMAELTSVLFFHTMKYKVSDPRDASSDRFVLSKGHSAPILYAAWCMAGLFSEDELMQLRKLGNDLEGHPTPRLNFVDVATGSLGQGLSCSAGMAYTGKYLDKGSYRVFCLMGDGESAEGSVMEAANFAGYYKLDNLVGIIDINRLGQSDPTSLQHEMDVYQKRWESYGWNAIVVDGHDIEAICRAYFDAEQANGRPTMILAKTYKGKGVPGVENEMNWHXXXXXXXXXXXXXXXXXQMVDKNVSGEKLNTQXXXXXXXXXXXSAIVLSEKPSYAADAKEATRKAYGLALAKLGRSSDRVVALDGDTKNSTFAITFQKEFPDRFVECFIAEQNMLGVGMGCATRDRTVAFASAFACFLSRGYDQIRMGAISQTKLKMAGSHVGVSIGEDGPSQMALEDLAMFRAINNCTVFYPSDAVSCERAVELCANTPNMCYIRTSRPATSILYGADEVFEAGKGKVVKQTASDFCLLIGAGVTLHECLKAHETLKAEGINTRVFDPFCIKPLDVQGIIANAKACNGNIVTIEDHYPEGGLGEAVLSAVAMETGIRVQRLAVTGLPRSGPSAALMEMFGV 2042
            E YH PDQ+K+Q LKD AN+LRI SI+ T AAGSGHPTSCCS AE+ +VLFFHTM+YK  DPR+  +DRFVLSKGH+APILYA W  AG  +E EL+ LRK+ +DL+GHP P+  F DVATGSLGQGL  + GMAYTGKY DK SYRV+CL+GDGE +EGSV EA  FA  YKLDNLV I+DINRLGQSDP  LQH+MD+YQKR E++GW+AI+VDGH +E +C+A+    QA  +PT I+AKT+KG+G+ GVE++ +WHGK L     + I       +    S +K+      +D   VD + I +   PSY    K ATRKAYG ALAKLG +SDR++ALDGDTKNSTF+  F+KE PDRF+EC+IAEQNM+ + +GCATR+RTV F S FA F +R +DQIRM AIS++ + + GSH GVSIGEDGPSQMALEDLAMFR++   TVFYPSD V+ E+AVEL ANT  +C+IRTSRP  +I+Y  +E F+ G+ KVV ++  D   +IGAGVTLHE L A E LK E IN RV DPF IKPLD + I+ +A+A  G I+T+EDHY EGG+GEAV SAV  E GI V  LAV  +PRSG  A L++MFG+
Sbjct:    2 ESYHKPDQQKLQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAF---GQAKHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAEQIIQEIYSQIQ---SKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAELLKMFGI 607
The following BLAST results are available for this feature:
BLAST of TCONS_00011196 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TKT0.000e+059.97Transketolase OS=Homo sapiens GN=TKT PE=1 SV=3[more]
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