TCONS_00011195 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011195
Unique Name	TCONS_00011195
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2706

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000122:340581..351793+

transcript sequence

>TCONS_00011195 ID=TCONS_00011195|Name=TCONS_00011195|organism=Clytia hemisphaerica|type=transcript|length=2706bp
TACGGTTTCGCTCTCCTCCGTTTTGCTAATTTGTTTAATGCATACCCGTT
TTGCTCTGCGATACGAAGCACCACGTAGGAGGTTCAAGATGTCGAAAGTG
TAGATAAAAGGCGGCTTTTTCATCTAGGATCACTCCAAGCAAATCACGCA
CGTTGCAAGACTTTGCTGACTGACTGGCGAGGAACAAAGAATTCAAGTAC
ATTCTTGAAATTGGAAAACAACAAACTTATTACAATGGCTGAATTATATC
ACTGCCCAGACCAaaagaaaatccaaaacttgaaaGATGTTGCCAACAAA
CTTCGAATTTTGAGCATCAAATGTACAAATGCTGCAGGATCTGGCCATCC
CACATCATGCTGCTCGATGGCTGAGCTCACATCTGTTCTTTTCTTCCACA
CCATGAAGTACAAAGtaagCGATCCAAGAGATGCATCCAGTGATCGATTT
GTCTTATCTAAGGGTCATTCTGCCCCAATCCTCTATGCTGCTTGGTGTAT
GGCTGGTCTCTTCAGTGAAGACGAACTTATGCAATTACGAAAACttggaa
atgatttggaagGCCATCCTACACCAAGATTGAACTTTGTTGATGTGGCC
ACTGGATCTTTGGGTCAAGGTCTAAGTTGCTCTGCTGGTATGGCATACAC
TGGAAAATACTTGGACAAAGGAAGCTACCGTGTTTTCTGTTTGATGGGTG
ATGGTGAAAGTGCTGAAGGTTCTGTCATGGAGGCTGCCAACTTTGCTGGG
TACTACAAATTGGACAACTTGGTTGGTATCATTGACATTAATCGTTTGGG
ACAAAGTGACCCAACCTCATTACAACACGAAATGGATGTTTACCAAAAGA
GATGGGAAAGCTACGGGTGGAATGCCATTGTTGTTGATGGACATGATATT
GAAGCAATTTGCCGTGCTTACTTTGATGCTGAACAAGCAAATGGGCGACC
AACTATGATCTTGGCAAAGACATACAAAGGAAAAGGTGTTCCTGGCGTTG
AGAACGAGATGAACTGGCATGGAAAAGCTCTCGGTGCCAAAGCTGATGAT
GCTATCGCTGCTATTGAAGCTCAAATGGTCGACAAGAATGTATCTGGCGA
GAAATTGAACACTCAAGTGGTTGTGGATGACGTCAAGCCCGTTGACCCGT
CAGCCATCGTGCTGTCAGAGAAACCATCATACGCAGCTGATGCCAAAGAG
GCTACCCGAAAAGCTTATGGTCTCGCATTGGCTAAATTGGGTCGATCTTC
AGACCGTGTAGTTGCCCTTGATGGTGATACCAAGAACTCGACTTTCGCCA
TCACCTTCCAAAAAGAATTCCCAGACCGTTTCGTCGAATGCTTCATTGCT
GAACAAAACATGTTGGGCGTCGGTATGGGATGCGCCACAAGAGACCGCAC
GGTGGCGTTTGCAAGTGCCTTTGCCTGCTTCTTGTCCCGTGGGTACGATC
AAATCCGTATGGGTGCTATCTCTCAAACTAAATTGAAAATGGCTGGCTCA
CACGTTGGTGTCTCTATTGGTGAAGACGGTCCATCTCAAATGGCTTTGGA
AGATCTCGCCATGTTCCGCGCCATCAACAACTGCACTGTTTTCTATCCCT
CCGATGCCGTCTCGTGCGAACGCGCGGTCGAATTGTGCGCCAACACACCC
AACATGTGTTACATTAGAACTAGCCGACCAGCTACTTCTATCTTGTACGG
TGCCGATGAGGTCTTCGAAGCCGGCAAAGGAAAGGTCGTTAAACAAACAG
CTTCAGATTTCTGTCTCTTGATTGGTGCTGGTGTAACACTTCACGAATGT
TTGAAAGCACACGAAACTTTGAAAGCTGAAGGTATCAATACTCGTGTCTT
CGATCCTTTCTGTATCAAACCATTGGACGTCCAAGGAATCATCGCAAATG
CTAAAGCTTGCAATGGAAATATTGTCACCATTGAAGACCATTATCCAGAA
GGTGGTCTTGGTGAAGCTGTTCTGTCCGCTGTCGCCATGGAAACTGGAAT
TCGCGTCCAACGATTGGCTGTCACTGGTTTGCCACGCTCAGGTCCATCCG
CTGCTTTGATGGAAATGTTCGGAGTTTCTGCCAAACAAGTCGTCGAAGCT
GTCAAGAAATTCTAATAAGTTGTTTGGCTGTCTCGCGTAGAGATTAATGT
GACCGCGCTTTCCGAGAGCGTTTCCTACGAGATGAGATATGGGGATATGT
ACTGAACTAAATGAGATAGATATTATATAAAGCTGTATTTAGCGTAGATG
TGAACTGTCTTTTCCCTGTGTATCGTTCCAATGAATAAATGTTCTGGGAA
AATTGACAAACGGGGCAAAAGACACGGTATTCTACGTTGAATAGCATTTA
ACTACCTATGAATAATCTTAAATTGTCAAAAACGATTTAGTTCAAATTTA
CATAGTCTGATAAAATGGACTTCGTTCAGTTTTATGTTACTTTTTGcgtg
attttattttttcgacttttatttatattttggtatttttgctTGATCTT
GTAAAACGGTAAATTggcttttgtaagattttttgtGATCGAGGATGTAA
TTTTTTATGCTTGTTTTACTTTTCTGTGAAAACAGAACGGAAAGAAAAAG
CAATAGATGATGTTATAGAATACTTTGTATCCATTCATTCATTAATATGC
TTGATAGCAATGATAACTTACTATCAACCTCAATTGAAAATGTTGTATCG
TTGGAA

Run BLAST on NCBI

transcript from alignment at sc0000122:340581..351793+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011195 ID=TCONS_00011195|Name=TCONS_00011195|organism=Clytia hemisphaerica|type=transcript|length=11213bp|location=Sequence derived from alignment at sc0000122:340581..351793+ (Clytia hemisphaerica)
TACGGTTTCGCTCTCCTCCGTTTTGCTAATTTGTTTAATGCATACCCGTT
TTGCTCTGCGATACGAAGCACCACGTAGGAGGTTCAAGATGTCGAAAGTG
TAGATAAAAGGCGGCTTTTTCATCTAGGATCACTCCAAGCAAATCACGCA
CGTTGCAAGACTTTGCTGACTGACTGGCGAGGAACAAAGAATTCAAGTAC
ATTCTTGAAATTGGAAAACAACAAACTTAGTAAGTATATTTCTTCATACT
ATTTGTGAATGTTGGAAGGTTATTGAAAGACTTCTTATCCTCTATATTTT
GCAACCatgtttgaattttgaaggacTCTCTAAGTTTCAAGACATAAGCG
ATAAGCTAATTATATTACCAACAAGTTTTGAGGCTTCATTTCTCTACTAT
GCTGAAAAAGCAGAATAAACTGGAGTGCTAAAAGGGgagagttatttttt
cttttgtttaaaaaaacttgCAAGAAAATAGTTTAGATTATACATAATTC
GGAGTTCAAAATTAGGCAACCcctttatagtatttttagacGGTCCCTGT
TTGAAAAATAGTCTAGGTGGCAGGCCCCTAAGttccagacaatctcaatc
aaaAGGAATTAACAACCAGATCATACACAAATGCCATTGAAATTCAATTA
TGTTTGATGACATTTAAAGATGTGTTCGATTGCATTCTAGTGAGATTGCT
TGAGTATGgggtatagaccttttcgccagAAGCAGCTAAATGCCAAGAAA
ACGCAAGTCGTCATTTTCCCcgaatttcccgatttcccgatttaaATCCG
AAATCGGGTAGTATATCATTTCGggattcactttcgttttcggacttAGT
GattttttcagactttttctcAGGAACCTGCAGGAACTCCAATCATCTCT
TGGTTTACCATTGAGCCCTTCTTTTTTTAAGTGTCCGTGAATTAGGTTTA
TCGCCCAAAGTTAACAATTTAGCCTCACTCTGTATAATTCAGGATTTTCT
CTGTCACACGTATACGTCGAGCCAATGTTGAAGTTAGACACGTTATAGTT
ATTTTATAATGAAAAGCATGTAAATAGTAATTTGCGTCTTCTCGTGATAT
CACTTTCTCTTTGATTAAAAGCTAAGATCTGAGATGACGCAAATAACTCT
CCCGAACAAGtccgaaaacaaaagtgaatcCCGAAATGATATACTACCCG
ATTTCGGATTTAATCAGGAAATCTGGAAATTTGGGGAAAATGGCGACTTG
CGTTTTCTCGGCATTTAGCTGCTTctcttttcgcctttccatctgccatc
ttgaattgtatgcaaaaatagaggaacaaaaaagctgtggttggatttag
ttggaaaatatgcaaaacatatgcaagtttacacaaagattaaaaagaca
acaaagcatcttataattaaagaaatattataatcattagaacaataaaa
gatggaatttcttaatccaaaaagaattaattacagaacaacaaaagcct
tttagaaattttttctcaaacacattgcatattctgttttcatgccatta
aaaaattccaccaagacggagtacacGCATCAagctttcaaaacacgcaa
actgaaagcagttaattatgacgtcacaccttcagcgggttcagatcaat
gttttgatttgatcgtctgccgtttctattcccaggagaataatctACCG
TCAGCCAGCCAAATAAGGATGATTTTTGTATCTTCGCGGCTGATTTTTta
gtttgagtttatgtctaatgttatggttttttgaagtgcttgttctaaga
gatgagcgaatttgacaatttctagttttcaaaagaagtagatttaatct
ttcttctacaagattacactttataATAATGCCAATGATgcaagttttat
attaatattttctttttgcatatgtgtTGCATACTTTCTAAAGGAATTTC
ACCACAGCGATTCGGCCatcataatttttgcatacaattcaatatggagG
ATGGAAAGGCCAGTGTACAGTGCTAACCTTTCATTACAGTCCCTCAAACG
TGTACAAAAAGTGTTGAATAACAAATTGGTTTCCTacaagggtcataaat
tcttgaaatttagataaaatttgaaaattttgactgACATTTTTGggaaa
tagtctctctaaggtggcaaaaatggacaaaaaattcaaaatttaatctc
TCTAGGACATACCTATCTCGCAAACCCAGTACTCTGAGTGACTTTAACAG
TGTACAATattgaagggggggggggcatgacTTCTGGAAACCtaaaaaac
aaaagtactttAGTACAGTacctgtaagggttggaaaaatcagaaaatca
aactttagttccactaagggttggaaaaataggaaaatttgaactttgaa
atttgttcaaattagtCCAGCAAGTAAGGGTAGTTTTTTTTTGCTCCTTT
CTAGTCGGGCTGCCCATTGCGTCAGCTGGCAACCCTAGCACTCCTCTTTG
ATTATACTAAAGTGAAAGAAATGAATAGACAAGGCAAGGGTTTGTGCTGT
GGGCGAAAATGTTAGTCATATTTATTTGTGGGCAGACCAGTTTCCATGCC
TTTTTAGTGTCTggttatcggacgctgcccttaaagaattgtgaaaataa
tggtgaaaaaagccttttttgagaaaaaatattagaaaagtgcccttttt
gatGCCTAgtggacaaaaagtgagggaaatacccaaaagacacgctgatt
ttgttcCTGAGATAATCGAGCAAAATTGAtgcgaatcaattttgctccat
tgtctcAGGGACAatagtgagatttcactttgaTTGGTAAAAAGAAAAGT
GGCGTTGAGACAGGAGAAAGCGTTTcatgttggtgggatggagcatgttg
cattggaccaacgcgaaaaaaacttcgcGTCCCCAAGCCTTAATTCTTGT
TGAGTTTATGCAAATAAATACATAGAAATGAAAAATAGCTGAGCAGGTGG
CCTGACCTAGGGTTATTTCTAGTACCAGTTGTCATGGAACCCTTCACCTG
AAGGGAAATATGGGGTACAttattttattgttgttttccCCAAGAAAATG
AGATTACTTCTAATGGGATGTCATCTTAATCTGTTTCAAAATTATTGCAA
TTAAGTAAAGAATAAGATTACATTTACagtataaatttaaatttttttct
tacagTTACAATGGCTGAATTATATCACTGCCCAGACCAaaagaaaatcc
aaaacttgaaaGATGTTGCCAACAAACTTCGAATTTTGAGCATCAAATGT
ACAAATGCTGCAGGATCTGGGTAAGAAATTTTTGAttgctttatttcatt
ttgGAACAGTTataaccaatgaagtataagcctgaagggctagaagtcaa
tctcctcggtaggatttgaagccaaccaaactaaaatttaccgctaaatt
tcgaaaaaaatatcaatcgtaaacaaaggaattgctagattcaatctgtt
gtCAAAAatgcagcgcattttttatttttaaggcttcactttttcttgcc
tgagaaaggttagagattgaacttcTAGCCCTTttggctttaaactcaat
ggttataaCCTTATTTCAATATTTGAAGTGCATGAATCAGAACACCTATA
TAAAATCTTTTCTTTCAACTATCAACAAAATTTTCCTGTGGGGAATGATG
ATGGATTCTTAAATATAATATTGTAATTAGTCGTAAACAATGTTTTTGGA
CAGACTTGAGCCATAGTCAATGTTGACCTTACTTTTGCCTTTCGTACATA
TTTGTTATTATGGAAGGTAATATGTTGACTCAACCATTTCTTTCAGCCAT
CCCACATCATGCTGCTCGATGGCTGAGCTCACATCTGTTCTTTTCTTCCA
CACCATGAAGTACAAAGgtattattttgtttgtttctttatGTATTGAAA
ATTTAGAATTAACCCTTTCCTTTGCATTTTCCACAATTTGATAGTTGATT
GTAAAAAGTTGATCAACTAaaacagtgctgcaaataacagCCGATAATCG
GTAAATACCggtcattttgtagtttctacGGGCCATTCTGAAGctaagtt
tttcattttgtccggttaaaatttgATGATTAGAGGCTAAGATAAATACT
TAGCGCTTGTAACTAAAAGAGGAAttcattttaaattaaaatagcTGTTT
CTAAAGGTCATTTCAGACAAAATTTTCTAAGGGGTTTCCACCAGACCCCT
GCTCTAATCATTCTTGTGAAAAAATTACTGGCCAAATGAatgaaatttcc
ttaaaaattcctaaaatcttTTCCAGTCTTCTTAGTGACTTGTGGTAATT
TGTGAtgaaataataactgaataaaagggaatcaaaactatgtttttttc
attttcagtaagCGATCCAAGAGATGCATCCAGTGATCGATTTGTCTTAT
CTAAGGTTAGTTTTCacaatataaacaaaatttgCTGGTGGATGATGTCA
GCTAGCAACCAGCCTTTCTGATTCAGATTTATTTGCGCTTTGACAAACAA
TTCTGCGTTCTATGGTACAGTAAGCACTTTTGTGTCAGCAAAAGCCAAAT
TAAAGTAAGCATTTGCATTGACAATAGCCGAAAGCTGACCCAAAATTAAA
ATGATACGTAAACTTTCTTCACTTTATCTATCAAGCTGCTTAGCTATGAG
TAGAAGCTCAAATTGTGGTTGGTTTACTTTACTTTCAGCTTGTATGCTAC
ATTCAATAATACTTTGTTCTTGTATTCCATATTTAGGGTCATTCTGCCCC
AATCCTCTATGCTGCTTGGTGTATGGCTGGTCTCTTCAGTGAAGACGAAC
TTATGCAATTACGAAAACttggaaatgatttggaagGCCATCCTACACCA
GTATGTTTGTTTCTTTTGTCCATACACTTTTTATGGTTTAAAAACTTTAC
TAAACATTCAATGATTTTAATTAAGTTCAACAATATTATGgtttaatttt
taattcaaaattgtTTACAATATTAAGGACCTCtactttttttacctttt
ctgaTAGTGCCAgataatacttgtattatataatatataaataatCAGTT
TAATTTAAGGGTCTGAAGATATCTAAGGATTTTACTCCCAGTAAGCAAAG
GATCTCCACTTAAAGGTTGTGATACATAAACATATTGCTTTTGACAATCT
AATATTCCCTacacattttcataaatttactaaaaataggAAATGTTTAA
TATTGTGAGCCTCTAACATGGCTTcagatttacaaaaatttggATTCCAA
ATGAGATTCCAAACAAATTCCAATACATATTCCCCAAAGAGGAGTCAGCC
AATCTCTATTGTTAAAAGGTTAATCCCCTTAGCAAACAAATTCTTACAAT
AGAAAAAGGAGATAAGGGCAGTTATTGTGCATACGTGCACATTTGAAAGG
GGGTGAATTGCAGAAAAATAGTACAATGTCCCGTCCGCATCAGGCACTTT
TTGAGGACCCATAACTCAACTTTGGCAAATGCAATTTCTAAGAACTTCAC
ATTTTTGTAGCCTTCCTTGGATTGttatagaatttttttgttacagcctc
aatcttgagaaaaatgtTGTGTATGGGACACTTTGTTGCGGACaggacaa
aaagtttttcacccATAGCTAGTTACATgtaaagtcaagaaaaatgataC
TGCTGCAAAAGCATGTGGTTCCCTATAGTTCATTGGCTTGATAAAGTTAG
AACATTAAAGTTGtctcaaaaaaagagaaattaagACCGTTGCGGACGGG
ACAAATTTTTGGACCGTATTAGTTTTTAccagttaaaaaattaaaaatct
tatTTATAGGCAATAAATGTCTTTAACGCAAGAAGCCATTTAATATGTCA
CAACAAGACGAAAATGGTGCTCTTCTAGTTCCCAGATCTTGACTTGTAAG
CATAAATGGAGCTTTTGTTGCGAATGGGACATTGTACTATTTTTCTGCAA
TTCACCCAAGGATTAAAATGTGATAGAGGAAATGTCATGGTATAACATCT
GTCAGCATTTTTCTTGGCTTCgctatttttagtaattttgTGAAAGTGTA
GGGAATGTGTATCGCAACCTTAACAATGATGAAtgaatgattttgttttt
cacaGAGATTGAACTTTGTTGATGTGGCCACTGGATCTTTGGGTCAAGGT
CTAAGTTGCTCTGCTGGTATGGCATACACTGGAAAATACTTGGACAAAGG
AAGGTAAGAAAACTTTATTGATTCAATGAGCTGTTCTTCCTACTGTAGTG
CATGTAggggtagagcatccagctacggtgcacaACACAAgtttgtgggt
tcaacccccagcctggcagccctgtgaatccaggtcggcattcggcaatG
CCGACCTGAAAGCCGACGTAACTTGCGTGCCGAAatgattttgtctgaat
tcacaGGGCTGGCCCGGTCaaaccaaagattctcaaaatggtactttatg
cctctctgcttgatgctcagcaattaagagaagggtcaagggtaagtgga
gcctTCCCCTAGCTCTCGAAGGAAGAGCCTTTGGGTCATCTCTGACTGTG
GTCCCAGACTTACTTACTTCTAAAGCTCAAATCAGGGGCCgcggctccac
tttgaaagtgatGGGGCCATGATATACTGAcgaaggaggcgccaccatgg
ttggcgccgacgggcgaaaatttttgagttttagctcttctagatcgccT
AATACAGGTTGGTTTTAAGGTTATTAAGCCAAGATTGGCTTGattagtaa
attttctttttactttgaaaaaatgtggtcgggCCAAGGCCCGGGTGGCC
CCCCCGGTGCCGCGGCCCAtgcaaatgttttaaaaatttatagCGTTATA
AGTTCTTCTTCTTTGGATTGTTGAACTTTCCCTGTCTGCAGAGTTTCAGT
CTTGAAAAAGACAGGAAAGAAGGAATTTATCAATATTTGGTCACGGCTCA
TGGTAAAATTACCATTTTGTATTGCGTTATCATTGTACaccaaattttat
tatttttacagCTACCGTGTTTTCTGTTTGATGGGTGATGGTGAAAGTGC
TGAAGGTTCTGTCATGGAGGCTGCCAACTTTGCTGGGTACTACAAATTGG
ACAACTTGGTTGGTATCATTGACATTAATCGTTTGGGACAAAGTGACCCA
ACCTCATTACAACACGAAATGGATGTTTACCAAAAGAGATGGGAAAGCTA
CGGGTAGGTAGAATttcattattatcattattgaAATAACAGTTTTTTCC
CTTCCGTTTAACCTGAATTTATGAGCACCTATGAGAGCTCCATCAAGAAG
AGCCAGAAATGATTACCTCTAGATTGTCTTCAGCTGATTGTTTTACTTCA
TTTCCAATTTCAGGTGGAATGCCATTGTTGTTGATGGACATGATATTGAA
GCAATTTGCCGTGCTTACTTTGATGCTGAACAAGCAAATGGGCGACCAAC
TATGATCTTGGCAAAGACATACAAAGGAAAAGGTATAATTATTCAAAAGT
GTTTACATTCTACTCAATCCaaaaaaaaccataaaaaatGCAATACACAT
TTTAAAGTGATAAGAAgactttttcatcttcttcaagTCTTAAAAACATT
CTTGTCCTTTGAATATCAGGTGTTCCTGGCGTTGAGAACGAGATGAACTG
GCATGGAAAAGCTCTCGGTGCCAAAGCTGATGATGCTATCGCTGCTATTG
AAGCTCAAATGGTCGACAAGAATGTATCTGGTGAGTTTCGCTATCTAAAT
TTCGAAGATTCATGCCCTCCCAGTCAGTTTGCTTTCAAATAATCGACGCC
TTGTTCGTATGCGGTCCAAGCCCTAAGTTGTGTCATCATACAGTAAAAAT
GATTGTTATAGCAAAACCTTTTCTTGCAGGCGAGAAATTGAACACTCAAG
TGGTTGTGGATGACGTCAAGCCCGTTGACCCGTCAGCCATCGTGCTGTCA
GAGAAACCATCATACGCAGCTGATGCCAAAGAGGCTACCCGAAAAGCTTA
TGGTCTCGCATTGGCTAAATTGGGTCGATCTTCAGACCGTGTAGTTGCCC
TTGATGGTGATACCAAGAACTCGACTTTCGCCATCACCTTCCAAAAAGAA
TTCCCAGGTTCGTATCATTNGTTGACCCGTCGGCCATCGTGCTGTCAGAG
AAACCATCATACGCAGCTGATGCCAAAGAGGCTACCCGAAAAGCTTATGG
TCTCGCATTGGCTAAATTGGGTCGATCTTCAGACCGTGTAGTTGCCCTTG
ATGGTGATACCAAGAACTCTACTTTCGCTATCACCTTCCAAAAAGAATTC
CCAGGTTCGTATCATTGGCTCCATATTTTTATGTAGATTGGTGACCTTAT
CAAGCAGAGAATTCACTGAAGTTAAAAACTGTCATCTAAAGGCTGTTCAT
GACATTTATATTATGTATTGAATTTAATTAAAAATGATGCACCTGTTTAA
ATGAGCTATGTTCAGTATTCATTAATACTTTTTTGTTCCTACTTAAAAGA
TCAAGTGAAACAATTTTAATTCCAAGCACTTAACACTAGatttttcttta
ccttttttATCAGACCGTTTCGTCGAATGCTTCATTGCTGAACAAAACAT
GTTGGGCGTCGGTATGGGATGCGCCACAAGAGACCGCACGGTGGCGTTTG
CAAGTGCCTTTGCCTGCTTCTTGTCCCGTGGGTACGATCAAATCCGTATG
GGTGCTATCTCTCAAACTAAATTGAAAATGGCTGGCTCACACGTTGGTGT
CTCTATTGGTAAGCTTCGGTTTCTTTATTCTATTAGAGTCCCACTCCTTT
TTCAGGAAGGTGACACTTTTACGCCTAACTTTTACGCCTTGTTTTTTTTG
GTACTATTAGACCGAAGTATTGCATGTGTAGGTCTTgatatttgattggt
tgattgatctTTAGAAGGAAATTTCAGAAGTAATACTTAAATAAAAATTA
CGACTTACAAAAATTACCTTTTCCACCCgacaaaatttataaatttgttt
ttttcaaatcgcATGAGAATCCAGAAATCAAGCGAAATTcagattggttg
aaaaatacgAGAAAGTTGGGCGGATGTATGGTTATGAAAAGTTCCTTTCT
GTCTATATAGGTGAAGACGGTCCATCTCAAATGGCTTTGGAAGATCTCGC
CATGTTCCGCGCCATCAACAACTGCACTGTTTTCTATCCCTCCGATGCCG
TCTCGTGCGAACGCGCGGTCGAATTGTGCGCCAACACACCCAACATGTGT
TACATTAGAACTAGCCGACCAGCTACTTCTATCTTGTACGGTGCCGATGA
GGTCTTCGAAGCCGGCAAAGGAAAGGTAAAAAATCGTATCATATTTTTGT
GTCTTCTCATAAATTTTACTCtcattcaaaaattgaaaaataaagccTTT
CTCTCGTAGGTTTTAGTGTCAACCTCAAGTTTGATTAAAGCAATCCTCAG
AAtctggaaaaaaaatcatcctacAAAttgtaatataaaaaaaaacgacc
TCAAACGCTGTATCAGAATCtgaatattttcagttcttgacatatttttc
aaaattgttttttaacaGGTCGTTAAACAAACAGCTTCAGATTTCTGTCT
CTTGATTGGTGCTGGTGTAACACTTCACGAATGTTTGAAAGCACACGAAA
CTTTGAAAGCTGAAGGTATCAATACTCGTGTCTTCGATCCTTTCTGTATC
AAACCATTGGACGTCCAAGGAATCATCGCAAATGCTAAAGCTTGCAATGG
AAATATTGTCACCATTGAAGACCATTATCCAGAAGGTTGGTAGATGATTA
TTGTTGCCTGGTCgacttcaatttttgttttagagGAACAGATTTTGTAT
CGGCCTCGGCCAATCTTTTTAGTAAACTTATGACTCATCGGGGCTTTTAG
GTTCTGGGATGTCAGgttcagattgttcttaatttgttcttgttTTTTGG
GATAtttgaaattgtgtttttcaacTAACGATGGACTCGATACGTATTAC
ACATTATTGAAGCATCGACAATCCGATTtaagattatttttgaaaattcg
gaCTCTTCAATAGTTTTACAAAAACTCATTTTCCGTTTTCAGGTGGTCTT
GGTGAAGCTGTTCTGTCCGCTGTCGCCATGGAAACTGGAATTCGCGTCCA
ACGATTGGCTGTCACTGGTTTGCCACGCTCAGGTCCATCCGCTGCTNATT
TTCTTGGTAATTTCTGGGATGTCAGgttcagattgttcttaatttgttct
tgtttttttgGGATATTTCCagtgaaattgtgtttttcaacTAACGATGG
ACTCGATACGTATTACACATTATTGAAGCATCGACAATCCGATTtaagat
tatttttgaaaattcggaCTCTTCAATAGTTTTACAAAAACTCATTTTCC
GTTTTCAGGTGGTCTTGGTGAAGCTGTTCTGTCCGCTGTCGCCATGGAAA
CTGGAATTCGCGTCCAACGATTGGCTGTCACTGGTTTGCCACGCTCAGGT
CCATCCGCTGCTTTGATGGAAATGTTCGGAGTTTCTGCCAAACAAGTCGT
CGAAGCTGTCAAGAAATTCTAATAAGTTGTTTGGCTGTCTCGCGTAGAGA
TTAATGTGACCGCGCTTTCCGAGAGCGTTTCCTACGAGATGAGATATGGG
GATATGTACTGAACTAAATGAGATAGATATTATATAAAGCTGTATTTAGC
GTAGATGTGAACTGTCTTTTCCCTGTGTATCGTTCCAATGAATAAATGTT
CTGGGAAAATTGACAAACGGGGCAAAAGACACGGTATTCTACGTTGAATA
GCATTTAACTACCTATGAATAATCTTAAATTGTCAAAAACGATTTAGTTC
AAATTTACATAGTCTGATAAAATGGACTTCGTTCAGTTTTATGTTACTTT
TTGcgtgattttattttttcgacttttatttatattttggtatttttgct
TGATCTTGTAAAACGGTAAATTggcttttgtaagattttttgtGATCGAG
GATGTAATTTTTTATGCTTGTTTTACTTTTCTGTGAAAACAGAACGGAAA
GAAAAAGCAATAGATGATGTTATAGAATACTTTGTATCCATTCATTCATT
AATATGCTTGATAGCAATGATAACTTACTATCAACCTCAATTGAAAATGT
TGTATCGTTGGAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006272	XLOC_006272	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000122	supercontig	sc0000122:340581..351793 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.5217	3.05263	8.27026	23.1187	4.22164	6.09438e-07	4.0244	3.7678	0.879306	4.35662	2.10312e-06	4.16966	15.2682	8.6484	7.11022	5.08687	3.1333	7.22597	2.21844	6.96436	4.03552	5.90517	5.98209	3.26314	56.0333	64.0259	5.72319	3.05397	5.79083	2.35998

Blast

[Close]

BLAST of TCONS_00011195 vs. Swiss-Prot (Human)
Match: TKT (Transketolase OS=Homo sapiens GN=TKT PE=1 SV=3)

HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0
Identity = 367/612 (59.97%), Postives = 455/612 (74.35%), Query Frame = 1

Query:  241 ELYHCPDQKKIQNLKDVANKLRILSIKCTNAAGSGHPTSCCSMAELTSVLFFHTMKYKVSDPRDASSDRFVLSKGHSAPILYAAWCMAGLFSEDELMQLRKLGNDLEGHPTPRLNFVDVATGSLGQGLSCSAGMAYTGKYLDKGSYRVFCLMGDGESAEGSVMEAANFAGYYKLDNLVGIIDINRLGQSDPTSLQHEMDVYQKRWESYGWNAIVVDGHDIEAICRAYFDAEQANGRPTMILAKTYKGKGVPGVENEMNWHXXXXXXXXXXXXXXXXXQMVDKNVSGEKLNTQXXXXXXXXXXXSAIVLSEKPSYAADAKEATRKAYGLALAKLGRSSDRVVALDGDTKNSTFAITFQKEFPDRFVECFIAEQNMLGVGMGCATRDRTVAFASAFACFLSRGYDQIRMGAISQTKLKMAGSHVGVSIGEDGPSQMALEDLAMFRAINNCTVFYPSDAVSCERAVELCANTPNMCYIRTSRPATSILYGADEVFEAGKGKVVKQTASDFCLLIGAGVTLHECLKAHETLKAEGINTRVFDPFCIKPLDVQGIIANAKACNGNIVTIEDHYPEGGLGEAVLSAVAMETGIRVQRLAVTGLPRSGPSAALMEMFGV 2076
            E YH PDQ+K+Q LKD AN+LRI SI+ T AAGSGHPTSCCS AE+ +VLFFHTM+YK  DPR+  +DRFVLSKGH+APILYA W  AG  +E EL+ LRK+ +DL+GHP P+  F DVATGSLGQGL  + GMAYTGKY DK SYRV+CL+GDGE +EGSV EA  FA  YKLDNLV I+DINRLGQSDP  LQH+MD+YQKR E++GW+AI+VDGH +E +C+A+    QA  +PT I+AKT+KG+G+ GVE++ +WHGK L     + I       +    S +K+      +D   VD + I +   PSY    K ATRKAYG ALAKLG +SDR++ALDGDTKNSTF+  F+KE PDRF+EC+IAEQNM+ + +GCATR+RTV F S FA F +R +DQIRM AIS++ + + GSH GVSIGEDGPSQMALEDLAMFR++   TVFYPSD V+ E+AVEL ANT  +C+IRTSRP  +I+Y  +E F+ G+ KVV ++  D   +IGAGVTLHE L A E LK E IN RV DPF IKPLD + I+ +A+A  G I+T+EDHY EGG+GEAV SAV  E GI V  LAV  +PRSG  A L++MFG+
Sbjct:    2 ESYHKPDQQKLQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAF---GQAKHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAEQIIQEIYSQIQ---SKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAELLKMFGI 607

The following BLAST results are available for this feature:

BLAST of TCONS_00011195 vs. Swiss-Prot (Human)

BLAST of TCONS_00011195 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TKT	0.000e+0	59.97	Transketolase OS=Homo sapiens GN=TKT PE=1 SV=3	[more]

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TCONS_00011195 (transcript) - C. hemisphaerica