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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011194 ID=TCONS_00011194|Name=TCONS_00011194|organism=Clytia hemisphaerica|type=transcript|length=517bp
AAAAGATTATAAGGTAAAAGTAATATTTGTCACTTTCGGACACTTCCTAC
TGGTAAAGTTTGCAAATACGGGACCCTTACTTAAAGACCCTGCGTTAGAC
TTATTTTTTATCTTGTGTGTTTCGTGACCCAAGAAGACTAAAGTGAAACG
ATACTCTGTCCAGTGGAAACGGACTAATAGGTTTtgaaacATAAATCTCA
CAgaacaaaacaatttgaaatactATAATACAACACTACCGCAGTTGGCA
TCAACATTTTTTGAACGTTCATAACACGTTATATGGATGCCATGGACGTT
CGATGGACATATTTATGACGTTCTATGCTGCCAGCTCGGCCTaaatttat
aatatattttagTTTTTGTACAAGGTCACTATAAAATCcgacaaaaaaca
aaattaaaaaaaattctaccgtagatttctttaataaaatataatatctg
tataaaaaatattcttctGTTTTTCCCTTTACAGTAATTGTTTCAATTAG
aaattgatgaatttttc Run BLAST on NCBI transcript from alignment at sc0000122:299255..300158+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011194 ID=TCONS_00011194|Name=TCONS_00011194|organism=Clytia hemisphaerica|type=transcript|length=904bp|location=Sequence derived from alignment at sc0000122:299255..300158+ (Clytia hemisphaerica)
AAAAGATTATAAGGTAAAAGTAATATTTGTCACTTTCGGACACTTCCTAC
TGGTAAAGTTTGCAAATACGGGACCCTTACTTAAAGACCCTGCGTTAGAC
TTATTTTTTATCTTGTGTGTTTCGTGACCCAAGAAGACTAAAGTGAAACG
ATACTCTGTCCAGTGGAAACGGACTAATAGGTTTtgaaacattgagtttc
aagcccgaagggctagaggcgagactcctggatgggaaatgaaaccactt
atttcccatccagaacgcccacgCAACTACGTTACACAAACTCCggattg
aaattaaaatctatcgctagattttcaaaaaatgtagtcctccaaaacaa
aggaatcgcttgatacaatccgtcgtcatgattacgacgcgttctatgcg
cgttttggatgggaaataagtgccttcaatttctcttgcctgagaagggt
taaagtttcgcctctagcccttcgggcttgaaactcagtGTTTTAAAACG
AACATAAATCTCACAgaacaaaacaatttgaaatactATAATACAACACT
ACCGCAGTTGNATGTTTTAAAACGAACATAAATCTCACAgaacaaaacaa
tttgaaatactATAATACAACACTACCGCAGTTGGCATCAACATTTTTTG
AACGTTCATAACACGTTATATGGATGCCATGGACGTTCGATGGACATATT
TATGACGTTCTATGCTGCCAGCTCGGCCTaaatttataatatattttagT
TTTTGTACAAGGTCACTATAAAATCcgacaaaaaacaaaattaaaaaaaa
ttctaccgtagatttctttaataaaatataatatctgtataaaaaatatt
cttctGTTTTTCCCTTTACAGTAATTGTTTCAATTAGaaattgatgaatt
tttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011194-exon-sc0000122-1491911889:299255..299444 | TCONS_00011194-exon-sc0000122-1491911889:299255..299444 | Clytia hemisphaerica | exon |
| TCONS_00011194-exon-sc0000122-1510915933:299255..299444 | TCONS_00011194-exon-sc0000122-1510915933:299255..299444 | Clytia hemisphaerica | exon |
| TCONS_00011194-exon-sc0000122-1575043694:299255..299444 | TCONS_00011194-exon-sc0000122-1575043694:299255..299444 | Clytia hemisphaerica | exon |
| TCONS_00011194-exon-sc0000122-1491911889:299832..300158 | TCONS_00011194-exon-sc0000122-1491911889:299832..300158 | Clytia hemisphaerica | exon |
| TCONS_00011194-exon-sc0000122-1510915933:299832..300158 | TCONS_00011194-exon-sc0000122-1510915933:299832..300158 | Clytia hemisphaerica | exon |
| TCONS_00011194-exon-sc0000122-1575043694:299832..300158 | TCONS_00011194-exon-sc0000122-1575043694:299832..300158 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:299255..300158 + |
Blast
The following BLAST results are available for this feature:
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