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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011192 ID=TCONS_00011192|Name=TCONS_00011192|organism=Clytia hemisphaerica|type=transcript|length=769bp
tttcgaaaaaaaatgccTCAATAATAATTCAATTATTCACAAGTGATAta
tctaaaaattaaaatattaaaaaggaATAGAAAAGAAGTGATGAAGGCTT
TTGTAGAAGTCTCAATTACCAGTGTAGTATGGCAGTAGTATGTCCTTCCC
ATAATCCAAACCTCTttatttaaaaatgacaattaaaataattcgccaaa
attaaaaaaaatatggtTTTAAGGTTTAAAGGGCATCAGACTGGGTAAAA
AAGATTATAAGGTAAAAGTAATATTTGTCACTTTCGGACACTTCCTACTG
GTAAAGTTTGCAAATACGGGACCCTTACTTAAAGACCCTGCGTTAGACTT
ATTTTTTATCTTGTGTGTTTCGTGACCCAAGAAGACTAAAGTGAAACGAT
ACTCTGTCCAGTGGAAACGGACTAATAGGTTTtgaaacGAACATAAATCT
CACAgaacaaaacaatttgaaatactATAATACAACACTACCGCAGTTGG
CATCAACATTTTTTGAACGTTCATAACACGTTATATGGATGCCATGGACG
TTCGATGGACATATTTATGACGTTCTATGCTGCCAGCTCGGCCTaaattt
ataatatattttagTTTTTGTACAAGGTCACTATAAAATCcgacaaaaaa
caaaattaaaaaaaattctaccgtagatttctttaataaaatataatatc
tgtataaaaaatattcttctGTTTTTCCCTTTACAGTAATTGTTTCAATT
AGaaattgatgaatttttc Run BLAST on NCBI transcript from alignment at sc0000122:299007..300158+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011192 ID=TCONS_00011192|Name=TCONS_00011192|organism=Clytia hemisphaerica|type=transcript|length=1152bp|location=Sequence derived from alignment at sc0000122:299007..300158+ (Clytia hemisphaerica)
tttcgaaaaaaaatgccTCAATAATAATTCAATTATTCACAAGTGATAta
tctaaaaattaaaatattaaaaaggaATAGAAAAGAAGTGATGAAGGCTT
TTGTAGAAGTCTCAATTACCAGTGTAGTATGGCAGTAGTATGTCCTTCCC
ATAATCCAAACCTCTttatttaaaaatgacaattaaaataattcgccaaa
attaaaaaaaatatggtTTTAAGGTTTAAAGGGCATCAGACTGGGTAAAA
AAGATTATAAGGTAAAAGTAATATTTGTCACTTTCGGACACTTCCTACTG
GTAAAGTTTGCAAATACGGGACCCTTACTTAAAGACCCTGCGTTAGACTT
ATTTTTTATCTTGTGTGTTTCGTGACCCAAGAAGACTAAAGTGAAACGAT
ACTCTGTCCAGTGGAAACGGACTAATAGGTTTtgaaacattgagtttcaa
gcccgaagggctagaggcgagactcctggatgggaaatgaaaccacttat
ttcccatccagaacgcccacgCAACTACGTTACACAAACTCCggattgaa
attaaaatctatcgctagattttcaaaaaatgtagtcctccaaaacaaag
gaatcgcttgatacaatccgtcgtcatgattacgacgcgttctatgcgcg
ttttggatgggaaataagtgccttcaatttctcttgcctgagaagggtta
aagtttcgcctctagcccttcgggcttgaaactcagtGTTTTAAAACGAA
CATAAATCTCACAgaacaaaacaatttgaaatactATAATACAACACTAC
CGCAGTTGNATGTTTTAAAACGAACATAAATCTCACAgaacaaaacaatt
tgaaatactATAATACAACACTACCGCAGTTGGCATCAACATTTTTTGAA
CGTTCATAACACGTTATATGGATGCCATGGACGTTCGATGGACATATTTA
TGACGTTCTATGCTGCCAGCTCGGCCTaaatttataatatattttagTTT
TTGTACAAGGTCACTATAAAATCcgacaaaaaacaaaattaaaaaaaatt
ctaccgtagatttctttaataaaatataatatctgtataaaaaatattct
tctGTTTTTCCCTTTACAGTAATTGTTTCAATTAGaaattgatgaatttt
tc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011192-exon-sc0000122-1491911889:299007..299444 | TCONS_00011192-exon-sc0000122-1491911889:299007..299444 | Clytia hemisphaerica | exon |
| TCONS_00011192-exon-sc0000122-1510915933:299007..299444 | TCONS_00011192-exon-sc0000122-1510915933:299007..299444 | Clytia hemisphaerica | exon |
| TCONS_00011192-exon-sc0000122-1575043694:299007..299444 | TCONS_00011192-exon-sc0000122-1575043694:299007..299444 | Clytia hemisphaerica | exon |
| TCONS_00011192-exon-sc0000122-1491911889:299828..300158 | TCONS_00011192-exon-sc0000122-1491911889:299828..300158 | Clytia hemisphaerica | exon |
| TCONS_00011192-exon-sc0000122-1510915933:299828..300158 | TCONS_00011192-exon-sc0000122-1510915933:299828..300158 | Clytia hemisphaerica | exon |
| TCONS_00011192-exon-sc0000122-1575043694:299828..300158 | TCONS_00011192-exon-sc0000122-1575043694:299828..300158 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:299007..300158 + |
Blast
The following BLAST results are available for this feature:
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