TCONS_00011179 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011179
Unique NameTCONS_00011179
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2228

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011179 ID=TCONS_00011179|Name=TCONS_00011179|organism=Clytia hemisphaerica|type=transcript|length=2228bp
GTTTTTGGTTGTAATTGAATGAAAGCCACAGTATTAGAACTAAACACAAT
AAATGAGAGGATTGAAAAATGACGGAGAACGAACATATAGTAGACACGAA
TTTTTATGCGTTACCAGTGGCAGGTGGCAGCAAACAACAATTCTTTCCAA
TTGACATCGGATGTGATGACCAGTTTCATGTCAACTACAACGCGCAAAAA
GTATTCAAGACACGGAAGGTTGGGGACGAGCAACAAAGACACCTTCATTT
CCATACCCCATCCATACCACTCACCATCCCGACACATCCATACATTTCAC
CAACAGAATCGATCACCAAAAAAAACCTGACCAGacacaatcaaatcaaa
acaacacctCGTATTTTACACCAATACGAATGGTACAAAGAACATATCAT
GCTTCAGCAATCATGTGGTTTAAAACGAGGCCTTGATTCGTTAAGTTGGG
ACTCGGTTAAATGGTCCTTCGACAAATATACCAAGGAACCATCAATGCAT
AGACTCATACCATCCTACAGTGATTCGATAGTCTATGACAAAGTCGAAGA
TGTTTACAGTGATATTCCAATACCATTATTGCACTCTTACATCGATGAAT
CTTGTCTGCAAGATTACCTAAGCGAAGATTATTTAAACATCAGAAACTGT
ATCAcacgttggaaagataatttagTGATTATTTCATCCGGTCCTTATTG
CAACGAACTTGTTTTAGTGAAATTGGTATTTTTGGATAATGGCTTGATAG
ATACGAGGGTGTTTGCCATTGAGGATGTTCATTCGCGAATCTTTGAGTTA
CAATGTCATGGTGATATGCTCTTTGCACGAACGTGTTATACCGTGGCCTA
TTATTCCTTAATTTTCGAAGACAACAGTTATCGTTTGGAGAAGAAGAAAC
ATTTCACTTTCGACCAACAAATTCATGATTTTGCTATCAATCCGTCTCAT
CCAAACGATTTGGTGGTTGCTACGCAACAATCCTGTTCACTCGTCTCTTT
GAAAAGCGGGAAGATACAGCAATCGATACCGAACAACCATACCAAAGATG
GTGGTGAACTCGTAACAACCAATAACAATCATTGGCAAAGCCTCCTCTAT
GGAAGTTCTGTGTCAACATTTATACAGTCTTGGAAGTCTGGTGTCGAAAT
GCACGATTTCAGGGAGAAACCAACCATCTCACATACTTACCTTGAACTAC
CTTCAGAATACTTGCAAAGAACAGAACAACTCAGTCCTGTTCTCAATTGG
AATCCTCTTAAACCGTACCACCAGTACGCTATCACGACTGATCAAGCTCT
ATTGATTTGCGACGAACGATATCGAAAAACACCTGTGATGAAGATCAACC
ATTTTATGGACACTCCTCCGCAGTTCATACAAACGCGGCTGAATAGAGAG
TCGCCTGAAAGCTGTCTTTTCGTTATTGGGAGTCACAAGAAGAGTGAACT
AATGGCTATCACGTTACGTCAAGGAACAATCGAACACGTCCCTATTTCAT
CGAGAAATGACGCCTCCATCAAAATTCGGACACCCTCTCAACTTGACGGG
CACTTATCTAAGtTAACAAATCAAATAGTATggaaaaacaaataaacaaa
aacaacagcAACACAAGAATGAATaatttcaaacaatgaaaagagtAGCA
ATTATTGGTGCAGGTGGTGGTGGGTTATGTGCAGCCAAACATCTGCTCTC
CCACATTGGTGTGGTGGAGCCACCTGTCATTTATGAACAAAGCAACCATG
TGGGCGGAACATGGGTTTATGAAGCAATAACGCCAAATTGTGATGAGCCC
TTCTCTAGTATGTACGAAAATCTCAGaacAAATCTACCAAAGGAGGTGAT
GAGTTTTCCAGACATGTCCTATCCTAGAAATCTACCTTCTTTTCTCCATC
ACACGGAAATCAAGAAATACATAGAGAACTATGCTAAGAAATTCAAGCTG
TACGATCACATTCGATTTCAAACAAAAGTTGATCACGTGACTCCGAATAC
TGGTGGTGGATGGAAAGTGACCACTATTGAAAATGGTGATAAAGAAAACA
TGGAGACTTACGACTCAATATTGGTATGCAATGGACATTATTCCAAACCA
TATTACCCACAAATACCAGGGCTAAAGAATCATTACCGAAACAGGACCAC
TCATAGCCATTACTACAGACACCCTGACCAATTTTCTGATGGTCCGCAAA
ATACATGCTTCGTTTTGGGTATTGGACC
Run BLAST on NCBI

transcript from alignment at sc0000122:120826..131935+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011179 ID=TCONS_00011179|Name=TCONS_00011179|organism=Clytia hemisphaerica|type=transcript|length=11110bp|location=Sequence derived from alignment at sc0000122:120826..131935+ (Clytia hemisphaerica)
GTTTTTGGTTGTAATTGAATGAAAGCCACAGGTATCTTGGGTAAAACGCT
AGATTGAGCTACTCTTTCCTGCTGAAGCACAATAATGTACCCTCTTTAAA
AGAAGATCACGGTTCGatgccggcaatttgatcaaccaTTTTCTCGCCAT
GTCAGTTGTTTCTTCATATTGATCAAAGttgccggtaccgaactgtgGTC
TAACTACAAAAggcaaagatggcgcattattattttgctttaaatgTAGT
GGCTAAAGAAAGAGTATGCCTTTCACTATCGAAGGCTTGGATGCAAGAAT
TTAGAATGttcatttctcattttttttggaacggtttttttatttttacc
aaattttcatttaatttttttttagtccaacttttttttcggTAGCTCTT
AGTGATTTCAGTTACGACAttaaggagaattttttttacaaattttcggT
TTAGTTCGGTTTGGTTAGGACGCTAATATAACTGCTTTTAAAAAAGTGCT
AAAACCGACCAAATCGCCCCTGTCCAAGCAAAGTTAATCTGAGGTGCCTA
GTAAACAACCCCGCTCataaattgtttaaaatattttagctGTCGAAAGA
CCAACAACCCTCCTTTCTGCGAGATTCCTTTCAGAGTTGAATTGAATAAT
GCATTCTTGTATCTTTTCTTTTACAGTATTAGAACTAAACACAATAAATG
AGAGGATTGAAAAATGACGGAGAACGAACATATAGTAGACACGAATTTTT
ATGCGTTACCAGTGGCAGGTGGCAGCAAACAACAATTCTTTCCAATTGAC
ATCGGATGTGATGACCAGTTTCATGTCAACTACAACGCGCAAAAAGGTAG
CATGATCCAGGTCttctaggctgcacgcatcccctctgatatgttttgat
ataggggatgtgcACCGTGGATGAAATTCTCGTTCGAGAAATGTCgttga
aaagttatttttttaggCACCCAAAAGCCAAAAGAACTGCTCTCTCGACT
TTTCGTTAAACCGCGCTTTCTATATAGAacgtttttatcaaaaatttcac
tACACTTctatattaaaggttttgtttttaaataagagtgatgtcGTTTG
CTTAgttatcaattttaattcacaagctttttaacattggattgacacgg
atgtggagcaagattggtcagaagaggaaaagaaaaacattattttgctt
atatatcagcataatataacaataacaAGACActttcctgatatgaaata
tgcgtctgatatgaaacggatgtaagaataaaactaaaataaatactcta
taaatattttttctccaGTATTCAAGACACGGAAGGTTGGGGACGAGCAA
CAAAGACACCTTCATTTCCATACCCCATCCATACCACTCACCATCCCGAC
ACATCCATACATTTCACCAACAGAATCGATCACCAAAAAAAACCTGACCA
GacacaatcaaatcaaaacaacacctCGTATTTTACACCAATACGAATGG
TACAAAGAACATATCATGCTTCAGCAATCATGTGGTTTAAAACGAGGCCT
TGATTCGTTAAGTTGGGACTCGGTTAAATGGTCCTTCGACAAATATACCA
AGGAACCATCAATGCATAGACTCATACCATCCTACAGTGATTCGATAGTC
TATGACAAAGTCGAAGATGTTTACAGTGATATTCCAATACCATTATTGCA
CTCTTACATCGATGAATCTTGTCTGCAAGATTACCTAAGCGAAGATTATT
TAAACATCAGAAACTGTATCAcacgttggaaagataatttagTGATTATT
TCATCCGGTCCTTATTGCAACGAACTTGTTTTAGTGAAATTGGTATTTTT
GGATAATGGCTTGATAGATACGAGGGTGTTTGCCATTGAGGATGTTCATT
CGCGAATCTTTGAGTTACAATGTCATGGTGATATGCTCTTTGCACGAACG
TGTTATACCGTGGCCTATTATTCCTTAGTAAGTGAATGTTGTTAACCCCT
CGACCGCCGGAGAGATTTTAATGCTCAAAACATACCTTTTCAGTTTAGCA
CAAAGATgtcatttttctgaaaaaaattgtttgaaaatagttacagtgga
gtctccataactcgaacacgcacgggggacacaaatttgttcgagttaag
gaaatttcgagtaaggtttgtaaggcattgttaactgaaggggccCTAaa
ttttgttcgagttatggagacattCAAATTATAGAATAGATATAGAGGTT
CGACTTAAACAATgtataacattttttttctggTTTTCTTTTTTGCCTTG
TTCCTAAAAAACCTCACTATTAATAGCTGCACATTCGCTAAATCAATTAC
TGCTTCGAACATACAATTGGGTTTATTCCAAAACGCATACTGTATCATCT
TTAAGATTGCTAAGTTTGGATacctttaagggaactaattttcgcgggaa
ttaatcaGCACCCGCGAACTACaaattttcatacaaaaacTCGAAAAGTC
CCTAGGAAGATggaagaaatttgtcaaaaatagggcaaaaccgcaaaaat
taattcccgcgaaattcaaatttttcgctttttttcgatcgcgaaaatta
gttcccttaaggtaactaTCTGAGAGCAGATTTATTGAACTTGTTCTCTT
GTTATTCATTTAGATTTTCGAAGACAACAGTTATCGTTNgctaaaattag
ttcccttaaggtaactgAGAGCAGATTTATTGAACCTGTTCCATTGTTTT
TCATTTAGATTTTCGAAGACAACAGTTATCGTTTGGAGAAGAAGAAACAT
TTCACTTTCGACCAACAAATTCATGATTTTGCTATCAATCCGTCTCATCC
AAACGATTTGGTGGTTGCTACGCAACAATCCTGTTCACTCGTCTCTTTGA
AAAGTAAATTGGGCTCTTATATGATATAGGAGATACCTTATTGGGCATTG
CCCCATCAACAGGGTGGGCCATGCCCCCTTACTTTTTGCAGACTAaatca
aaaacctgtttttatcCAATTAAATAGCATTTTATGTTGTTAGAAGGTGC
AAAAGGGAAATTTTTCTACGTCGCTAAAAATCTTTACCCCCTCACTTCAA
ACACTTCACCGGGACCCATGTCGGACTGTGTCGGAAACACTTCACGCAGG
CAAATTTCCAGGGTTTTGAGCTGCTaccgtttttatttcaaagattgaGT
TTGAATTCAGTTCGAAGAACTAAATAATCAACCCAGGCTCTGTTTAATTA
GTTGGGAGCTgttaaaacacaaagaattaaccTCAGAATGAGCTTTTTCT
GTTAATAAGGACCTAggacatcaaatttttgtcaTGATTCTCATGGCTCA
TGTACAAAAATtaggattgagtttcaaaattcaagcaaAGATTGAGTTTC
TGTCACCGTTATCCGGTAGCAGAAAAAGGCCTGGAAATTTGCCTGTTCAC
GGGAAATTTTCACACGATGTTTTTCACTACCTCAAAAAACTAAATAAGTT
ATATACCCCCTATTTTAGTTTCCCCAATAATATACCTTATTTATACCCGG
ATTTTTTTCCTTATTGCAATAAAAGTTCATTGCTAACTCTAAGTATTTTT
CACTTCCACGAGCTTTTAGGAGGAGTTTTTCCTCAGTCCTCGTTCTTTTT
TAGCTCATGCAGCCTGAATTGTTATTGTTGGTACCATTTTGTTGGCGGAT
TTTAGGATAACATTTTTGTAAACTGAAGAAAATACAGTTGAGTTTTGCTA
ATTCGAGCTCGAACGGGTCCTATTTGCTCCAAAGCTCGagttacagagag
attcgaattatagaagcaTTTTACAGGGGTTTCCCTTTTACGGGGAGTGG
TAATAagctcgaattatagaaagcttCGAATAGGGAGAGGGgttgaaaaa
aatcttcaaaaaacatGGCTATTCAGAACAAAAAAGGGACTCTTCTTTTG
acggctgaaaatattttcaaaaattaataaacgggggagggTCCCGATAA
GGCCTGCGgggttgaaaaaaaacaacaaacagggggcgtttatttactTG
TGATCCTAATTTTTTATAGGCGGGAAGATACAGCAATCGATACCGAACAA
CCATACCAAAGATGGTGGTGAACTCGTAACAACCAATAACAATCATTGGC
AAAGCCTCCTCTATGGAAGTTCTGTGTCAACATTTATACAGTCTTGGAAG
TCTGGTGTCGAAATGCACGATTTCAGGGTAAATTTACAAACACTCCAAGG
TCATATCAAAAAGGAAtactataaaaatgaaaaattttcttctagTGGGA
cggtaaaaataacagactgCAACTCGATGGGAATTAATATTCCGATATAT
TTTTTAATGGTTggagatttgaattccattgtttttaacagtcagaaaat
tcagtaggggattggaaaaaataccgcaatattttgcagtgaggatttgt
ttatttgattatttgcAGCGGGACAAAAACtgaagtataattttccactg
gggacgatattttggccaaccTTTTCAGTGGGACGGGTTcccaccaggtc
tgtgagaagggagtgtcaTTTTTAAGacatgaaaaactgaaaaattacaA
CAAGTGTCCCTGTTGTCTTACTGCTTCGTGCCTGTTCTTTTGTAGGAGAA
ACCAACCATCTCACATACTTACCTTGAACTACCTTCAGAATACTTGCAAA
GAACAGAACAACTCAGTCCTGTTCTCAATTGGAATCCTCTTAAACCGTAC
CACCAGTACGCTATCACGACTGATCAAGCTCTATTGATTTGCGACGAACG
ATATCGAAAAACACCTGTGATGAAGATCAACCATTTTATGGACACTCCTC
CGCAGTTCATACAAACGCGGCTGAATAGAGAGTCGCCTGAAAGCTGTCTT
TTCGTTATTGGTAGGTTATTTTCATTCGGTTACTATTTCACTGAGAAACG
TTTGTAGTTCTGTTTGCGTTTAGTTgtgtacaatcatggacaaaaacTNG
CTGAATAGAGAGTCACCTGAAAGCTGTCTTTTCGTTATTGGTAGGTTATT
TTCATTCGGTTACTATTTCACTGAGAAACGTTTGTAGTTCTGTTTGCGTT
TAGTTgtgtacaatcatggacaaaaacTGTGAGACAAGAGTAGAATATAA
GATTCACCTCCCCTCCCCCCCAGTGGCAATGTTGAAGGGCAGTGGAAAAG
TCAGTGGGAAGACCATTTGCACTAAACCTtgccactggggggggggggtt
tcattgtttttccggcattttccagtgtttttctcaaacattaaaGTCCA
TCATTGCAGATCCATAATGTCACCGTTTTCAGCAGTTGGTTTTTTAGCCT
TAAAATACTGTTATTGTAAGAACAATCTTAATTAGAGTATGATGCTAATT
TAGCCAAAAACTAAGAAGAAATTAGGAACAATATTCTAAGGCCTAGAGCT
CGTAAATTGTCTACAATATTTCTGATTTTAAGTAAATATTTTAACGTAAG
TTAGAAAGTTAAGTGTACTAACTAAACGGTAAAACTTTTTAAGCCTGGAA
ATTTCTAAGAATTAAGAACAGCTTAGCATCAGCCATTATAGTTGAACCGA
GTTTGGTGATTCATAGAAAATTCAAACTTTACGTAATGTTATGTTTGTTA
GCCCTCGTCGTACAGtacctataacaatccaaaaatTCCTTTATCAATAG
ACTACGCCAAAATCGCAAATATTCGGATAAGTGCTGTGGTATAGCCACTT
TTTTGTCAACTTGGCGCGCTTGTTTGTTAAGGgagcttttggattgttat
aggtaaTTACTGTAGGCTGAAAATACCTTTTatccgatatacggctaaag
gcggtaaatctctggacaaaggaattATCGGTTATTGATCATCCtcttta
agaagcatgactccGTTAGTGGATGTCAGCAGCCTAACCATCCGCCAAAC
TTATTTCCCGCCAAAAGCCTACCAATAGTGGCAATGTCGGTAATCTGTGT
TTTTAAGATTCGTGTCTTTACACCTTTTAGGGAGTCACAAGAAGAGTGAA
CTAATGGCTATCACGTTACGTCAAGGAACAATCGAACACGTCCCTATTTC
ATCGAGAAATGACGCCTCCATCAAAATTCGGACACCCTCTCAACTTGACG
GGCACTTATCTAAGGTAAGCGGTAATATTGTGAGATTAAATAATGGTGCt
gtgatttttgtttttttttggttaaaatcgTAATTAATTTAACGTGTGGc
tgaaatttgaaataattcattCATTTTTCTTCTAATTATTGCGCCTAGAT
AAGCCTTGGACAAAAGTTAGACTGGgagcaatttttttgaaaaagaagaa
cgaTATAATACTTGTCAAAATGAATGAACATAGATAGTTTCGGTAGAATT
ATAAGTTCAGATTTACATAGAAGTTTGGTTAGCTAGAGTCAAAAAGATCT
CTCTAAATAAGCCATGGAAATTTATTTCTCTCCAATTATTAACGCATACA
TAGAATGCTTAAATTTTGCAATTAATCCTTCTCTAATTTTTCATGCGTAG
CGTCCAAAATTAGTCCAAGTTTATTATCACGCGTTAAATTAGAAGAATTA
CTGTAGGTAACTCGCCGCGACAGACATCGCCAAAAAAACAAAGTCGTCGT
GCAATGAAAAAGCCGTAATCTTTAGTATAGACTACAAAAACATAAGAAAG
ATGTCTTAGTCGGAATCTAATAGTAACTTTATAGTGTCCCTGGGTTTGAT
TGTTTGCAGTtctatttctagttttcatcTGCTGACGAATGGCTATATCA
AATGGACGATTGGAAACTAAGTTACCAAAACATATTCGATCGCTGCTCAA
ACCAACCATGTTTAGGGTTTATTATTTGCGAATGCCCTGGAAACGAGGTC
TGTATGATAGAAGAGACACAGCCATGTGACTTGTTTTATCAGAAGTTTTC
ATGTGGGCATCCATATGAAAGGGAAAGTCCCAAACGACTCACGAACCACG
AGGAGAAAAGATGTAGTGCATGGCTAGAAGCCACGTGGAATTTATTAAAC
AATAAAACGACCGAAAAGGATGACGggaaattattttcttattatGATGT
CATGGATGTTGAAGAACAAATGAAgcaaaacgaaagcgaaagtgaaatcc
tAGATTTAGCTGGTAACCAATCAGAAGAAAGCATTATTATAGATTCGGAG
AATCCAAACCACGATGATACCcacattgaaaataaacaagGCTTAACGAG
AGATGATTATACTGGATATGGGTCAAACACGAATAACCTTACTGATGCCA
ATAATTTTACATATGACGGCAGTCAAGATCTTTTTGATAAGCCTTCTGCA
GAACATCAGAGTAGTGCAAATAATGCTGAGTTAGCTAAAAAAGAAAGCTT
CAATTCCAATGAAGTTTgggaaaaattgacaaaattaaaaacaactaATA
GTTTTGTTACACGTTCCTCATTGAACTTACCACCGAGCTACAATGATATT
GATGataaaatgatgacgtcatcattcgaAACTGTGACGTCACCGTGGCA
AAATTATGATAAACCTGTTGGCAAGACGTTATTGAAGAATTGGGCGGAGG
GGAGTAAGGAAGGGTATACGTTTCTGGAGGATTTTGCTCCTGAGATCAAT
TTCGAACGTTTGAAAGAAGATGCGATGAATATGTATGGGCCTTGATCTTT
GATGTAATAATAAAGTTGAGTAAAGTGTTTCTTGATTTGGGTCTCCATCT
TTGAACTATAAACACATTTGAGAGGTCGGTGAGAAATTTCTTGGGATTAC
CCATGAATTCTCAAATCTTTGGGAATAATTGAATAAATGGTGtggcaatt
ttttttgttgttctgaaggtcgggaaaattttcaacatacggaaggttta
gattacggaattttgtaAGACCGTGTCAAGGATTTTTCAGCGGGAGACCT
GGACCCCAGCCTTCGTTTTCGGGGATAGGCGGATCCAACCGAACTATAAT
CAGGTTTACGCGCAAGaatagttgaacccgactgaggaaGCGGCACATCA
AAAGCCGACTATCATTcttctccgatgggaaattagcctgctcctttaga
gcttcagcgtgggcgaccgccaatccgccattggaatatcagataacagC
TGGGTTCAgagaagggctagatggcgtacttttgctgaaaactgtgccgt
ggttaggtagaaaatcctacctaggtcacgtgacattacaatagaatttc
agcgcttgaccaatcagaagctttgcgggttttccgaaaacaatagcaac
aatatttttcctaTATTCACTTCTTTTTGCCTACGATGGCTTTTGGGCTG
TAAATCTATGGCTGGGTTCCGTTCAAAGTATTTTTAACGACGTTCAATCA
TAATCaacattttgtttttcagtTAACAAATCAAATAGTATggaaaaaca
aataaacaaaaacaacagcAACACAAGAATGAATaatttcaaacaatgaa
aagagtAGCAATTATTGGTGCAGGTGGTGGTGGGTTATGTGCAGCCAAAC
ATCTGCTCTCCCACATTGGTGTGGTGGAGCCACCTGTCATTTATGAACAA
AGCAACCATGTGGGCGGAACATGGGTTTATGAAGCAATAACGCCAAATTG
TGATGAGCCCTTCTCTAGTATGTACGAAAATCTCAGGTAATTGATTCCCA
ACGTTTTGATGTTGATCATATTTTACTCTCTTAACGATAGTTCGACCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNctttggtaggatttgttggcttcaaatcctaccaaagagattgacctc
tagcccttcgggcttgaaactcaatgagttCGACCTCCCTGGTGAAGTAA
TGATCTTGCTTAAGATTCTCACGCAAATAAAACTATCAACGTTGAAAGAA
AGTTCTGTCTGCCTTTTTTGAATCTGATTGGATTTCGAATCTACAAAATA
GATCATCAAAGATATCTAtcgaatggaaaaataaaattgaagaaaaagaa
actgAAGAACTTGAAGTTTAGTTACTTTATAGCCATTGGGACTgtgcttt
tttgaaagaaactcttttattttatagaacAAATCTACCAAAGGAGGTGA
TGAGTTTTCCAGACATGTCCTATCCTAGAAATCTACCTTCTTTTCTCCAT
CACACGGAAATCAAGAAATACATAGAGAACTATGCTAAGAAATTCAAGCT
GTACGATCACATTCGATTTCAAACAAAAGTTGATCACGTGACTCCGAATA
CTGGTGGTGGATGGAAAGTGACCACTATTGAAAATGGTGATAAAGAAAAC
ATGGAGACTTACGACTCAATATTGGTATGCAATGGGtgggtttttctttt
tttaggctAGTGGTTTAGCTGCTGGGTTAACCATTTAACGTTTTTTAGTG
ATGGCCTTTCTAACTCTTCTGACATCCCTGGACACgaggggctggggtcc
cagcgggtctgtgacaccaTGGAGTCATCATCATTATTCATTTTGCTTCt
caaattttattggtttgctTGTCAATTCATAATATCCATGGCGTAatttt
ttatacggaagcacccccAAGATAGCGCGGGCGCTTGTCACTAAATTCAT
TGTTTAAACTCAAAATCTGTGGCAAACACTggcaaaaaagtcttttttgg
GTGCTCCCGTACAAaacatatcatgaatatcacgaattgGAAGAAATGTT
AAAAAGAAACGTTCAAAGTAACAAAGTACTGTAACTTATTGATATTCTTA
TATTATTCTACTTTAGACATTATTCCAAACCATATTACCCACAAATACCA
GGGCTAAAGAATCATTACCGAAACAGGACCACTCATAGCCATTACTACAG
ACACCCTGACCAATTTTCTGATGGTCCGCAAAATACATGCTTCGTTTTGG
GTATTGGACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006262XLOC_006262Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011179-exon-sc0000122-1491911889:120826..120856TCONS_00011179-exon-sc0000122-1491911889:120826..120856Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:120826..120856TCONS_00011179-exon-sc0000122-1510915933:120826..120856Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:120826..120856TCONS_00011179-exon-sc0000122-1575043694:120826..120856Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:121502..121671TCONS_00011179-exon-sc0000122-1491911889:121502..121671Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:121502..121671TCONS_00011179-exon-sc0000122-1510915933:121502..121671Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:121502..121671TCONS_00011179-exon-sc0000122-1575043694:121502..121671Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:122144..122802TCONS_00011179-exon-sc0000122-1491911889:122144..122802Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:122144..122802TCONS_00011179-exon-sc0000122-1510915933:122144..122802Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:122144..122802TCONS_00011179-exon-sc0000122-1575043694:122144..122802Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:123584..123728TCONS_00011179-exon-sc0000122-1491911889:123584..123728Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:123584..123728TCONS_00011179-exon-sc0000122-1510915933:123584..123728Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:123584..123728TCONS_00011179-exon-sc0000122-1575043694:123584..123728Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:124895..125052TCONS_00011179-exon-sc0000122-1491911889:124895..125052Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:124895..125052TCONS_00011179-exon-sc0000122-1510915933:124895..125052Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:124895..125052TCONS_00011179-exon-sc0000122-1575043694:124895..125052Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:125471..125735TCONS_00011179-exon-sc0000122-1491911889:125471..125735Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:125471..125735TCONS_00011179-exon-sc0000122-1510915933:125471..125735Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:125471..125735TCONS_00011179-exon-sc0000122-1575043694:125471..125735Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:126856..126989TCONS_00011179-exon-sc0000122-1491911889:126856..126989Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:126856..126989TCONS_00011179-exon-sc0000122-1510915933:126856..126989Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:126856..126989TCONS_00011179-exon-sc0000122-1575043694:126856..126989Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:129248..129511TCONS_00011179-exon-sc0000122-1491911889:129248..129511Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:129248..129511TCONS_00011179-exon-sc0000122-1510915933:129248..129511Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:129248..129511TCONS_00011179-exon-sc0000122-1575043694:129248..129511Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:131103..131360TCONS_00011179-exon-sc0000122-1491911889:131103..131360Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:131103..131360TCONS_00011179-exon-sc0000122-1510915933:131103..131360Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:131103..131360TCONS_00011179-exon-sc0000122-1575043694:131103..131360Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1491911889:131792..131935TCONS_00011179-exon-sc0000122-1491911889:131792..131935Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1510915933:131792..131935TCONS_00011179-exon-sc0000122-1510915933:131792..131935Clytia hemisphaericaexon
TCONS_00011179-exon-sc0000122-1575043694:131792..131935TCONS_00011179-exon-sc0000122-1575043694:131792..131935Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:120826..131935 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.49627	5.57238	3.90659	2.83365	2.54509	2.39598	1.64566	1.43794	1.8622	0.00353611	1.99217	1.95726	1.87181	2.06139	1.5858	1.84835	3.31361	2.93969	1.65148	0.637556	1.73802	1.96942	4.58482	4.17877	2.24604	1.79866	0.988183	1.27655	3.30118	3.52876
Blast
[Close]
BLAST of TCONS_00011179 vs. Swiss-Prot (Human)
Match: FMO2 (Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Homo sapiens GN=FMO2 PE=1 SV=4)

HSP 1 Score: 111.309 bits (277), Expect = 9.714e-26
Identity = 59/174 (33.91%), Postives = 100/174 (57.47%), Query Frame = 1 
Query: 1723 PVIYEQSNHVGGTWVYEAITPNCDEPFSSMYENLRTNLPKEVMSFPDMSYPRNLPSFLHHTEIKKYIENYAKKFKLYDHIRFQTKVDHVTP----NTGGGWKVTTIENGDKENMETYDSILVCNGHYSKPYYP--QIPGLKNHYRNRTTHSHYYRHPDQFSDGPQNTCFVLGIG 2226
            P  +E++  +GG W ++    N ++  +S+Y+++ TN  KE+  F D   P + P+FLH++++ +Y   +AKKF L  +I+FQT V  V      ++ G WKV T  NG KE    +D+++VC+GH+  P+ P    PG++  ++ +  HS  Y+HPD F         V+G+G
Sbjct:   28 PTCFERTEDIGGVWRFKE---NVEDGRASIYQSVVTNTSKEMSCFSDFPMPEDFPNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSSGQWKVVTQSNG-KEQSAVFDAVMVCSGHHILPHIPLKSFPGME-RFKGQYFHSRQYKHPDGFEG---KRILVIGMG 193
The following BLAST results are available for this feature:
BLAST of TCONS_00011179 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FMO29.714e-2633.91Dimethylaniline monooxygenase [N-oxide-forming] 2 ... [more]
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