|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011153 ID=TCONS_00011153|Name=TCONS_00011153|organism=Clytia hemisphaerica|type=transcript|length=1269bp
NNATACCAATACAAGCCATACGgatctttatttttcgtcatgtttttcac
acaaatagCAGTCATGTTTTTCGAAGCCAGCAGTGAACCGTTTACCGATT
GCGGCGTGTTACGTCGTGCCGAACTGAGCCCGCACCGTAAAATTGATTAC
GGAAGACAACGCTTCTTTGGTGCGTTCGGCGTCATTACTTGCGTTACGTT
ATCTAACGTATTCGCGGATAACTTCCCGAAAGCCAACGTGACATGTTATA
CAGCTTTGTTTATCATGTACGTCATTCTAACCATCTTGAATTTGATCTCC
GTCTTGTTTCTATACAAAGGACTATCATTCGAATCAccaaaacaacaaca
agaaaCAGCCAATAACATCGCAGACGAGAAGAAAGAATCATATCGCAAAG
TGTTACGAGAAACCCTTACCAAAGTGGATACTATAGTATTCCTCTTAACA
ACATTCGTAGCTGGGTTAGTCAATTCTCCGCTCATCATGTTTCTCTTTCT
ACACTTGAAGGAAATGAATGCACCGTCAACTGTATTTAACCTCAGCTTCG
TTTGTTCGGCAACGGGGGCTTTATTTGGTTTCTTCTTCTCTCAAAACATC
ATCAAATTCCTTGGAGGCTCTATGAAGACTATTTTGTTCAGTATAGTCAT
TTTCACTGTACGATCCTTCGGTGTGGCAGCTATTACCAACTCCTGGCTTG
TATTGATCTTCCAAGTGTTGCACGTGTTGAGTTTCGTTCTTTTTATGGCT
TCGGGTTTGAAATACTTGAAAGAAACCATCCCTTTACTGGTGATGACAAC
CATGGTTTCTATATTCCGCTCCATCTTCGAAGGACTCTCCATCATGGTTT
CTTTGAGCATTGCTGGAATGATTTTCAATCAATACGGTGGCCGTGTCATG
TACGCATCTTTCGGTGGCCTAGGATTACTATGGAGCATTTTCTTGGcaat
ttatatatttgcaattcAAATGAGGCGaagtaaaaatattcaaaagacaC
AGGAAATCTGTTAGAAATTGTAAAACAGTGACAAAAATCATTTTGGGAAA
gatattttactactttaaatctttaaactttttttacacCTATTTTTTAA
CGTATGTAAATTTGCTTTGTATCATTGTAGCAATTTCATTTCGTATTTTA
GATGAAATCTTCTGTGAGTAAAAAACTTCCTCTTTCTCAGTTGAAAAGTA
TGATTTGATGAAAGTTTCTTCCAATTTACAATTACAGTAAACTCCTTTTC
attcgaatctctattattc Run BLAST on NCBI protein sequence of TCONS_00011153-protein >TCONS_00011153-protein ID=TCONS_00011153-protein|Name=TCONS_00011153-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
XYQYKPYGSLFFVMFFTQIAVMFFEASSEPFTDCGVLRRAELSPHRKIDY
GRQRFFGAFGVITCVTLSNVFADNFPKANVTCYTALFIMYVILTILNLIS
VLFLYKGLSFESPKQQQETANNIADEKKESYRKVLRETLTKVDTIVFLLT
TFVAGLVNSPLIMFLFLHLKEMNAPSTVFNLSFVCSATGALFGFFFSQNI
IKFLGGSMKTILFSIVIFTVRSFGVAAITNSWLVLIFQVLHVLSFVLFMA
SGLKYLKETIPLLVMTTMVSIFRSIFEGLSIMVSLSIAGMIFNQYGGRVM
YASFGGLGLLWSIFLAIYIFAIQMRRSKNIQKTQEIC Run BLAST on NCBI transcript from alignment at sc0000121:459068..460336 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011153 ID=TCONS_00011153|Name=TCONS_00011153|organism=Clytia hemisphaerica|type=transcript|length=1269bp|location=Sequence derived from alignment at sc0000121:459068..460336 (Clytia hemisphaerica)
gaataatagagattcgaatGAAAAGGAGTTTACTGTAATTGTAAATTGGA
AGAAACTTTCATCAAATCATACTTTTCAACTGAGAAAGAGGAAGTTTTTT
ACTCACAGAAGATTTCATCTAAAATACGAAATGAAATTGCTACAATGATA
CAAAGCAAATTTACATACGTTAAAAAATAGgtgtaaaaaaagtttaaaga
tttaaagtagtaaaatatcTTTCCCAAAATGATTTTTGTCACTGTTTTAC
AATTTCTAACAGATTTCCTGtgtcttttgaatatttttacttCGCCTCAT
TTgaattgcaaatatataaattgCCAAGAAAATGCTCCATAGTAATCCTA
GGCCACCGAAAGATGCGTACATGACACGGCCACCGTATTGATTGAAAATC
ATTCCAGCAATGCTCAAAGAAACCATGATGGAGAGTCCTTCGAAGATGGA
GCGGAATATAGAAACCATGGTTGTCATCACCAGTAAAGGGATGGTTTCTT
TCAAGTATTTCAAACCCGAAGCCATAAAAAGAACGAAACTCAACACGTGC
AACACTTGGAAGATCAATACAAGCCAGGAGTTGGTAATAGCTGCCACACC
GAAGGATCGTACAGTGAAAATGACTATACTGAACAAAATAGTCTTCATAG
AGCCTCCAAGGAATTTGATGATGTTTTGAGAGAAGAAGAAACCAAATAAA
GCCCCCGTTGCCGAACAAACGAAGCTGAGGTTAAATACAGTTGACGGTGC
ATTCATTTCCTTCAAGTGTAGAAAGAGAAACATGATGAGCGGAGAATTGA
CTAACCCAGCTACGAATGTTGTTAAGAGGAATACTATAGTATCCACTTTG
GTAAGGGTTTCTCGTAACACTTTGCGATATGATTCTTTCTTCTCGTCTGC
GATGTTATTGGCTGtttcttgttgttgttttggTGATTCGAATGATAGTC
CTTTGTATAGAAACAAGACGGAGATCAAATTCAAGATGGTTAGAATGACG
TACATGATAAACAAAGCTGTATAACATGTCACGTTGGCTTTCGGGAAGTT
ATCCGCGAATACGTTAGATAACGTAACGCAAGTAATGACGCCGAACGCAC
CAAAGAAGCGTTGTCTTCCGTAATCAATTTTACGGTGCGGGCTCAGTTCG
GCACGACGTAACACGCCGCAATCGGTAAACGGTTCACTGCTGGCTTCGAA
AAACATGACTGctatttgtgtgaaaaacatgacgaaaaataaagatcCGT
ATGGCTTGTATTGGTATNN Coding sequence (CDS) from alignment at sc0000121:459068..460336 >TCONS_00011153 ID=TCONS_00011153|Name=TCONS_00011153|organism=Clytia hemisphaerica|type=CDS|length=1014bp|location=Sequence derived from alignment at sc0000121:459068..460336 (Clytia hemisphaerica)
CTAACAGATTTCCTGtgtcttttgaatatttttacttCGCCTCATTTgaa
ttgcaaatatataaattgCCAAGAAAATGCTCCATAGTAATCCTAGGCCA
CCGAAAGATGCGTACATGACACGGCCACCGTATTGATTGAAAATCATTCC
AGCAATGCTCAAAGAAACCATGATGGAGAGTCCTTCGAAGATGGAGCGGA
ATATAGAAACCATGGTTGTCATCACCAGTAAAGGGATGGTTTCTTTCAAG
TATTTCAAACCCGAAGCCATAAAAAGAACGAAACTCAACACGTGCAACAC
TTGGAAGATCAATACAAGCCAGGAGTTGGTAATAGCTGCCACACCGAAGG
ATCGTACAGTGAAAATGACTATACTGAACAAAATAGTCTTCATAGAGCCT
CCAAGGAATTTGATGATGTTTTGAGAGAAGAAGAAACCAAATAAAGCCCC
CGTTGCCGAACAAACGAAGCTGAGGTTAAATACAGTTGACGGTGCATTCA
TTTCCTTCAAGTGTAGAAAGAGAAACATGATGAGCGGAGAATTGACTAAC
CCAGCTACGAATGTTGTTAAGAGGAATACTATAGTATCCACTTTGGTAAG
GGTTTCTCGTAACACTTTGCGATATGATTCTTTCTTCTCGTCTGCGATGT
TATTGGCTGtttcttgttgttgttttggTGATTCGAATGATAGTCCTTTG
TATAGAAACAAGACGGAGATCAAATTCAAGATGGTTAGAATGACGTACAT
GATAAACAAAGCTGTATAACATGTCACGTTGGCTTTCGGGAAGTTATCCG
CGAATACGTTAGATAACGTAACGCAAGTAATGACGCCGAACGCACCAAAG
AAGCGTTGTCTTCCGTAATCAATTTTACGGTGCGGGCTCAGTTCGGCACG
ACGTAACACGCCGCAATCGGTAAACGGTTCACTGCTGGCTTCGAAAAACA
TGACTGctatttgtgtgaaaaacatgacgaaaaataaagatcCGTATGGC
TTGTATTGGTATNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011153-exon-sc0000121-1491911889:459068..460336 | TCONS_00011153-exon-sc0000121-1491911889:459068..460336 | Clytia hemisphaerica | exon |
| TCONS_00011153-exon-sc0000121-1510915933:459068..460336 | TCONS_00011153-exon-sc0000121-1510915933:459068..460336 | Clytia hemisphaerica | exon |
| TCONS_00011153-exon-sc0000121-1575043694:459068..460336 | TCONS_00011153-exon-sc0000121-1575043694:459068..460336 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121 | supercontig | sc0000121:459068..460336 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
|
