|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011105 ID=TCONS_00011105|Name=TCONS_00011105|organism=Clytia hemisphaerica|type=transcript|length=1379bp
TGAATTTCAATCCAGCAGCAATGTTACCAGGAGCtgcaccaccaaagaaa
gaaacCACCAACATCGCCGCCTCCTTTGATGAACCTGTTCAAACCAACAC
TCTTGAAACCGTCACCAAGGTATAATCATAAgcttatgtatgtgtgtttt
tccaACAGAGACGGTTAGCTCCTGTTGTATACCTACagtatacagttgac
gctctctaattcgacgctctactattcgataggctcccttatttgattaa
atttaaatccccgtcaacaagaaactctcataaacgacgctcccttattc
aataagctcccttattcaatgagctcccttattcgatgaaaatccaattc
cccttgaagatcgaattggaGAGCGTCATCTGTATTTCTTTTGCTCCAGA
AGAACTCTTTATTCTACAATAACTACAAACCATATTTTAATCATTTAATT
TCTTCAGTCTCGAGCACGTGGTCAAGCCAAACGTCGTCCGCCCTCACGCG
CCCGTGGAAGAGCACCTCCGTCAGCTGGAAACACTTCCCCAGACAAGGTT
GACGCCCCTCCGCCCATCATTCAAAAATCAGAACCCGAACAAACTATACC
TGAGAAAGAACCGGAACAACAGAAAACAAAAGAGGCTAGTAGTGTGATTA
AGAGAGTACAGGCTAAAGACATATTTGCAGAcgacgatgatgatgatgat
gattttttcacTAGTAAACCCAAGGTcgacaaaaaagaaattaaggACGA
TATATTTAGTACTGAGCAGCCCTCTACCAAATCTGATTCTAAAAATGATT
TATTCGGATCTACTGTTGCATCTAAAACAGTCGCAGCCGATGATCTATTT
GATACTAAACCCCAACCACCTGTGGATGACATTTTTACTGACAAACCAAA
AGCAGATAAATCCCAACCACCTCAGGATGATATTTTTGCAGATAGATTAA
GTACACCCGAGGATGAGTTGTTTTCAAATAATTCCAAGCCACCTAGCAAC
GATAAGTCTCAATCGCCGGAAGACGATATTTTTGCAACTAAACCAAAGAC
TTCTCAGGATAATATTATCGAAACTAAATCTCAACCACCCGAGGACGATA
TATTTGCGTCTAAAACCCAACCGCCTAAGGACGATATTTTCTCTACTAAA
ACCAAACCACCTGAGGACGATATCTTTGCGTCTAAAACCCAACCACCTGA
GGACGATATCTTTACGTCTAAATCAAAACCAGCTATAGACGATATATTTG
CAGATAAATCGCAACCTCCTGAAGATGACATCTTTGCAACTAAATCCAAA
TCTACTGTTGACGACATATTTGGAGATACGGAAGATAGCTCGAAGACCTC
TAAAAGTAAAACTTCTACTAAGAAAAAGG Run BLAST on NCBI transcript from alignment at sc0000121:370615..371993+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011105 ID=TCONS_00011105|Name=TCONS_00011105|organism=Clytia hemisphaerica|type=transcript|length=1379bp|location=Sequence derived from alignment at sc0000121:370615..371993+ (Clytia hemisphaerica)
TGAATTTCAATCCAGCAGCAATGTTACCAGGAGCtgcaccaccaaagaaa
gaaacCACCAACATCGCCGCCTCCTTTGATGAACCTGTTCAAACCAACAC
TCTTGAAACCGTCACCAAGGTATAATCATAAgcttatgtatgtgtgtttt
tccaACAGAGACGGTTAGCTCCTGTTGTATACCTACagtatacagttgac
gctctctaattcgacgctctactattcgataggctcccttatttgattaa
atttaaatccccgtcaacaagaaactctcataaacgacgctcccttattc
aataagctcccttattcaatgagctcccttattcgatgaaaatccaattc
cccttgaagatcgaattggaGAGCGTCATCTGTATTTCTTTTGCTCCAGA
AGAACTCTTTATTCTACAATAACTACAAACCATATTTTAATCATTTAATT
TCTTCAGTCTCGAGCACGTGGTCAAGCCAAACGTCGTCCGCCCTCACGCG
CCCGTGGAAGAGCACCTCCGTCAGCTGGAAACACTTCCCCAGACAAGGTT
GACGCCCCTCCGCCCATCATTCAAAAATCAGAACCCGAACAAACTATACC
TGAGAAAGAACCGGAACAACAGAAAACAAAAGAGGCTAGTAGTGTGATTA
AGAGAGTACAGGCTAAAGACATATTTGCAGAcgacgatgatgatgatgat
gattttttcacTAGTAAACCCAAGGTcgacaaaaaagaaattaaggACGA
TATATTTAGTACTGAGCAGCCCTCTACCAAATCTGATTCTAAAAATGATT
TATTCGGATCTACTGTTGCATCTAAAACAGTCGCAGCCGATGATCTATTT
GATACTAAACCCCAACCACCTGTGGATGACATTTTTACTGACAAACCAAA
AGCAGATAAATCCCAACCACCTCAGGATGATATTTTTGCAGATAGATTAA
GTACACCCGAGGATGAGTTGTTTTCAAATAATTCCAAGCCACCTAGCAAC
GATAAGTCTCAATCGCCGGAAGACGATATTTTTGCAACTAAACCAAAGAC
TTCTCAGGATAATATTATCGAAACTAAATCTCAACCACCCGAGGACGATA
TATTTGCGTCTAAAACCCAACCGCCTAAGGACGATATTTTCTCTACTAAA
ACCAAACCACCTGAGGACGATATCTTTGCGTCTAAAACCCAACCACCTGA
GGACGATATCTTTACGTCTAAATCAAAACCAGCTATAGACGATATATTTG
CAGATAAATCGCAACCTCCTGAAGATGACATCTTTGCAACTAAATCCAAA
TCTACTGTTGACGACATATTTGGAGATACGGAAGATAGCTCGAAGACCTC
TAAAAGTAAAACTTCTACTAAGAAAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011105-exon-sc0000121-1491911889:370615..371993 | TCONS_00011105-exon-sc0000121-1491911889:370615..371993 | Clytia hemisphaerica | exon |
| TCONS_00011105-exon-sc0000121-1510915933:370615..371993 | TCONS_00011105-exon-sc0000121-1510915933:370615..371993 | Clytia hemisphaerica | exon |
| TCONS_00011105-exon-sc0000121-1575043694:370615..371993 | TCONS_00011105-exon-sc0000121-1575043694:370615..371993 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121 | supercontig | sc0000121:370615..371993 + |
Blast
The following BLAST results are available for this feature:
|
