TCONS_00011093 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011093
Unique Name	TCONS_00011093
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3271

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000121:287386..292763+
coding sequence from alignment at sc0000121:287386..292763+

transcript sequence

>TCONS_00011093 ID=TCONS_00011093|Name=TCONS_00011093|organism=Clytia hemisphaerica|type=transcript|length=3271bp
CTTCGTGCATTTTAGCAGTCAGAAGGTCGGGAAAATAACATTGCGCAAAT
TTAACAAACACAAATTTGAATCGATCAACAGCATTCGATCATTTAAACCA
TGGCAGATTTCTACAGCAATGTTTCATCAATCGATGATAAAATCAAGAAC
AGTTTAAGCAGCACTTCCTTGGCATTCCAGCAGACATTCTTATCTAAATC
AATGCCAGATCTTCAAGCTATCAAAGCACCATTGAACAAACCTATTGGTG
GAGTTGATGATGGTGAAATCAACTTACCAGATATTGCACCGGCGACTGCA
GGAGTTATGGATTCTCAACCACCAATAGCATTGAACACAAGACGTAAATC
ATATGGAGATCTCAATGACATCAAATTCTTTAATTCTGAATCTAGTGCTG
GAGATCCTAGCTATGGTCATCAGGCTCAATTTCAACCAGAGCTGCAAGAA
GGTGTAGATCGACTTCTGATCAAGAAACGgagcattttaaatgaaatccA
AGTACCACAGTACCATAAAGGATCCAGGAAAGATATCCAGGATTTCTACA
ATcaagaagaaaatgaatttgaatcaAAACGGAATTCGAATCTCAAAGAG
TTAACAAGTCTGATGGTCAAGAAATCACCAAGGAAACTCACCATTGCCGA
AGAGTATCAGAAATTACAATTGGAAAGTAAAATGCAAGATGATATCCGAA
GAGCACAATCTATCTTTAATTCAACGCATAAGGAACGCATTGATGCTTGC
CAAACTAATCGAGATGGTATGGATTCTCTAGATTCTGCTCGTAAAATTCC
TGAACCATCCCAACCTGTTGAAGAATCTAAGCCAGAACCAATCGATGTAG
ATGCGTTAATCAATAACCGAGGTCCAGTCAGCAGGAATATAGAGgaagaa
aacaacaaattgCTAGAGCTCTTGAAGAATGATCGCCAAGCTGAACCAGA
GCCTTCAATAGTTGGATTCACCAAAACGTATGAGCCTGAGGAACAGATTC
CACAATACAGTAACCGAGACCTGCAGCAACTGGGAGAATCACCAGTAGCT
AGCCCAGTAGCCAGAGAAGAGAAAGAAAATGGAGATGGGAAACCATACTA
TCCAATCAAAATGTACGTtaaacaaccaaaacaaaaagataaagTTGGCA
AGAGAAGCGATAATAAGGGGAACAAGAAAGCTGGTGCTGGTGGTGGTTCA
TACGCAGATCTGGCAAACAGAAAATCGACCAAGAAACAACCAGTGACCAA
CAAAACCAAGAAAACAAAACGAAAAGTACAATCAGCTGGAGGCCAAGCAA
AACCTAAGGAAGGACATAACAACAAATCAAAAGTTGGTGAGGCACGAGGT
GAAGTGAAGTCAGCCCTGGAATCAACTGGTCCTTTCTGCAAATGTTCTGA
TGAAGAAGATGGAGGAGCTGAAGAGCCAATTGATGCTAAGCATACACTGG
ATTATCCAATCGTTCGACCTGTATTTAATGGTAATTACATCTTCGGTGGA
GCCGCTGAGGAGCCACAGTATTACCAACCACCCGGTGGACCACAAGCCAC
GTTTATGGCACCGCAAGCTTTACCAAGTGGTGGATTCTATATCCCACAAC
AAACCCAATATGCACCTCAAGATATGGCACCTTCCAGAGGAAATGTCAAT
GGTAATCTCTATTTTGCTGGATCTAATGATCCTTATCAACAGCAACCAGC
TCCATATAACGCGAATTTCGATACCCCATCAATGTCAGATAAAAACAATA
ATAGATATGATGACTGTCCGATggcacagaattatttcaacaAATTTGCA
GCCGTCCAAACATTCCAATCTGAATATCTCAATGAAATCAAGAATCAACC
TAAACCACCAGTTATGCCAAAGCTACCAGTTGGTCTTCACAACCCATCAA
TCGATATGATGCATACTCCAATCGAAAGTGGTATCTATACCACAAAAGGA
CAAGAATTCTTACCACCAGTACCAGGACATCAAATCCCAATCAAACAAGA
GAGATTCTCAGCCAGTAATGAATATACAAGGATGTCTTCACCACAAAACA
CTTCCAGTGGATACAGTACTGACGAAGGTTACGGTGAAAGACAACCTGTC
AAACCTAAACAACGGATAACCAAGAGCTTCTCACAAAATAGTGCTGAAGA
ACTTCAGGACGAAATCATAAGGAAAAACAAAGTGATGCGCCAAAAGCAAT
ACTCAGAAACCATTCGACAACACCAGAAGAGTTCATCACCCAAACCACAA
GTACCAAGTTGGAATATGCGATCACGTGATGATGAGAAAAATTATAATGA
ATCCAAACGAGCAGCGGCTTTACAATATGCTAAGAGTGTCCAATCAGAGC
CAAGAACGGCACCGCTTCCACCACCAGCCACTATCAAACCTTCTACAAAC
ACCACCACTCCATCGGATTATGATCAACTCTTGAAATCGATTGAGGAAAT
GAAACAACGACATGAGCAAGACAAAGTAGCTGTCGATCAACTTACCGCCG
GTAGACCACAACCTAAGAaataaaatctcatttttaaattttgtgtgaat
taaaagttttgaataaatttttattgatgATGAGACTCAGGTTTTCTGAT
GTAAGTGTTCTGACAACACTCACTGTAATTCTGAAGCAACTACAAATTGT
ACACTCGCTCTGAGGACGAATCACtataggaaaaataaattcaccCAGCA
GATTGGTCAGGAAACTCTGCCAGTCAAATAATCATTAACATTGTACTGGA
CTGTATTGTGAACATTCGATATGGGTCAAATTATGTATTGTCGACATTCA
ATATGGGTCAAATTATGTATTGTTTATATAGATTGatgtattttgaaaac
aaacgaTGGATTATAACCAAGGATTATAAAGTTGAAAAAGGACATTTAAA
TCGAATAATATTTCAAATCAGATAATTGCTGGTTAGGAAAGACTATTTAT
TCGGAAGCACTTTTAGAAAGTTAGTAAATATATATCTGTAAATaataaag
ttttcaattttatgtGAATTAACGGTATTGGATTAATCTTTAACGATGGC
GTTTGATCTAGGTTTTGATGAAGGGCTTAGCTTTCAATTATGTATTAAAT
GTATTAAGGGGGGGTTTCACTTTTACGGTACGACGGTATTGGGCCTTTTT
ACCCCCGgtaaatcggtattacgagaaaaaaacgacgggattacggtatt
tcattttctaccggtatcggtaaattgcctgtttttttgtcggtatttcg
atatttttatcaataaaaaac

Run BLAST on NCBI

protein sequence of TCONS_00011093-protein

>TCONS_00011093-protein ID=TCONS_00011093-protein|Name=TCONS_00011093-protein|organism=Clytia hemisphaerica|type=polypeptide|length=807bp
MADFYSNVSSIDDKIKNSLSSTSLAFQQTFLSKSMPDLQAIKAPLNKPIG
GVDDGEINLPDIAPATAGVMDSQPPIALNTRRKSYGDLNDIKFFNSESSA
GDPSYGHQAQFQPELQEGVDRLLIKKRSILNEIQVPQYHKGSRKDIQDFY
NQEENEFESKRNSNLKELTSLMVKKSPRKLTIAEEYQKLQLESKMQDDIR
RAQSIFNSTHKERIDACQTNRDGMDSLDSARKIPEPSQPVEESKPEPIDV
DALINNRGPVSRNIEEENNKLLELLKNDRQAEPEPSIVGFTKTYEPEEQI
PQYSNRDLQQLGESPVASPVAREEKENGDGKPYYPIKMYVKQPKQKDKVG
KRSDNKGNKKAGAGGGSYADLANRKSTKKQPVTNKTKKTKRKVQSAGGQA
KPKEGHNNKSKVGEARGEVKSALESTGPFCKCSDEEDGGAEEPIDAKHTL
DYPIVRPVFNGNYIFGGAAEEPQYYQPPGGPQATFMAPQALPSGGFYIPQ
QTQYAPQDMAPSRGNVNGNLYFAGSNDPYQQQPAPYNANFDTPSMSDKNN
NRYDDCPMAQNYFNKFAAVQTFQSEYLNEIKNQPKPPVMPKLPVGLHNPS
IDMMHTPIESGIYTTKGQEFLPPVPGHQIPIKQERFSASNEYTRMSSPQN
TSSGYSTDEGYGERQPVKPKQRITKSFSQNSAEELQDEIIRKNKVMRQKQ
YSETIRQHQKSSSPKPQVPSWNMRSRDDEKNYNESKRAAALQYAKSVQSE
PRTAPLPPPATIKPSTNTTTPSDYDQLLKSIEEMKQRHEQDKVAVDQLTA
GRPQPKK

Run BLAST on NCBI

transcript from alignment at sc0000121:287386..292763+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011093 ID=TCONS_00011093|Name=TCONS_00011093|organism=Clytia hemisphaerica|type=transcript|length=5378bp|location=Sequence derived from alignment at sc0000121:287386..292763+ (Clytia hemisphaerica)
CTTCGTGCATTTTAGCAGTCAGAAGGTCGGGAAAATAACATTGCGCAAAT
TTAACAAACACAAATTTGAATGTAAGTCTCAAAGAAagtgtttttaatta
ttttaaggGATTTTAAGGAATTAATTTTAACTCTGTTCTTTTGAACTGGT
ATATGTATTTGTGACTTTTATAATTTTCTATCGGTGATTtgcttttaaaa
taaaatattttagcaGTGACTGGATTTCTAATTTTCGTTATACACGATCT
GGAGTTAATTTGAATCCTCTTCAagcctatttttcatgatgttaaaaaaa
atgttaagtTTTATAAGGCCATCAATATCATATCCAGGAGATTAAGTATA
GTTTTTTTCTGCTGACTTATTCTCAATTTCTCTTTATCTACGTTCAGCGA
TCAACAGCATTCGATCATTTAAACCATGGCAGATTTCTACAGCAATGTTT
CATCAATCGATGATAAAATCAAGAACAGTTTAAGCAGCACTTCCTTGGCA
TTCCAGCAGACATTCTTATCTAAATCAATGCCAGATCTTCAAGCTATCAA
AGCACCATTGAACAAACCTATTGGTGGAGTTGATGATGGTGAAATCAACT
TACCAGATATTGCACCGGCGACTGCAGGAGTTATGGATTCTCAACCACCA
ATAGCATTGAACACAAGACGTAAATCATATGGAGATCTCAATGACATCAA
ATTCTTTAATTCTGAATCTAGTGCTGGAGATCCTAGCTATGGTCATCAGG
CTCAATTTCAACCAGAGCTGCAAGAAGGTGTAGATCGACTTCTGATCAAG
AAACGgagcattttaaatgaaatccAAGTACCACAGTACCATAAAGGATC
CAGGAAAGATATCCAGGATTTCTACAATcaagaagaaaatgaatttgaat
caAAACGGAATTCGAATCTCAAAGAGTTAACAAGTCTGATGGTCAAGAAA
TCACCAAGGAAACTCACCATTGCCGAAGAGTATCAGAAATTACAATTGGA
AAGTAAAATGCAAGATGATATCCGAAGAGCACAATCTATCTTTAATTCAA
CGCATAAGGAACGCATTGATGCTTGCCAAACTAATCGAGATGGTATGGAT
TCTCTAGATTCTGCTCGTAAAATTCCTGAACCATCCCAACCTGTTGAAGA
ATCTAAGCCAGAACCAATCGATGTAGATGCGTTAATCAATAACCGAGGTC
CAGTCAGCAGGAATATAGAGgaagaaaacaacaaattgCTAGAGCTCTTG
AAGAATGATCGCCAAGCTGAACCAGAGCCTTCAATAGTTGGATTCACCAA
AACGTATGAGCCTGAGGAACAGATTCCACAATACAGTAACCGAGACCTGC
AGCAACTGGGAGAATCACCAGTAGCTAGCCCAGTAGCCAGAGAAGAGAAA
GAAAATGGAGATGGGAAACCATACTATCCAATCAAAATGTACGTtaaaca
accaaaacaaaaagataaagTTGGCAAGAGAAGCGATAATAAGGGGAACA
AGAAAGCTGGTGCTGGTGGTGGTTCATACGCAGATCTGGCAAACAGAAAA
TCGACCAAGAAACAACCAGTGACCAACAAAACCAAGAAAACAAAACGAAA
AGTACAATCAGCTGGAGGCCAAGCAAAACCTAAGGAAGGACATAACAACA
AATCAAAAGTTGGTGAGGCACGAGGTGAAGTGAAGTCAGCCCTGGAATCA
ACTGGTCCTTTCTGCAAATGTTCTGATGAAGAAGATGGAGGAGCTGAAGA
GCCAATTGATGCTAAGCATACACTGGATTATCCAATCGTTCGACCTGTAT
TTAATGGTAATTACATCTTCGGTGGAGCCGCTGAGGAGCCACAGTATTAC
CAACCACCCGGTGGACCACAAGCCACGTTTATGGCACCGCAAGCTTTACC
AAGTGGTGGATTCTATATCCCACAACAAACCCAATATGCACCTCAAGATA
TGGCACCTTCCAGAGGAAATGTCAATGGTAATCTCTATTTTGCTGGATCT
AATGATCCTTATCAACAGCAACCAGCTCCATATAACGCGAATTTCGATAC
CCCATCAATGTCAGATAAAAACAATAATAGATATGATGACTGTCCGATgg
cacagaattatttcaacaAATTTGCAGCCGTCCAAACATTCCAATCTGAA
TATCTCAATGAAATCAAGAATCAACCTAAACCACCAGTTATGCCAAAGCT
ACCAGTTGGTCTTCACAACCCATCAATCGATATGATGCATACTCCAATCG
AAAGTGGTATCTATACCACAAAAGGACAAGAATTCTTACCACCAGTACCA
GGACATCAAATCCCAATCAAACAAGAGAGATTCTCAGCCAGTAATGAATA
TACAAGGATGTCTTCACCACAAAACACTTCCAGTGGATACAGTACTGACG
AAGGTTACGGTGAAAGACAACCTGTCAAACCTAAACAACGGATAACCAAG
AGCTTCTCACAAAATAGTGCTGAAGAACTTCAGGACGAAATCATAAGGGT
GAGTAGATATTATATAGTATTACTCGGTCATTTTGGGCTAGGTTTgcatc
gaaaaaatcaaaagttagTCTGTGTCATGCCAGAAATTTTAAACTTCATT
ACATTCATAAGGGCCCTTCATTGCATTCATAAGGGCCCTTCATTGCGATG
GATCGTTTCATTTTGCATTCgtaatattttcctttttttctttgtttata
tGTTTCTTAAAAAGGTCCCAGCGTTGTTCACCCTTTGTTCATGATCTCCA
TGATCTTGTCAATTAATTCTAACGTCAGATTTGAAATCTAtagtacaccc
ccttctcacagacccggtaggattttttcagccagtggggatgaaaataa
agGAATATGAAACTctatggggattgatattcccatactttctatggctg
gggattcagaaaactcaatggggatggGGAAAATAGCTTAATACTTTACA
ATGAGGTTTAGTTTATTtggttattttcagtggggacaaaaattggagga
tattTTTCACCGGGGTCCTTACTTTGGagaatttttccagtgggaggggt
cccagtgggtctatgagaaggggggTGTTATAGTGACATTAGTTACCGTT
ACTTTATCTTTCTCTCACTCTCCAGAAAAACAAAGTGATGCGCCAAAAGC
AATACTCAGAAACCATTCGACAACACCAGAAGAGTTCATCACCCAAACCA
CAAGTACCAAGTTGGAATATGCGATCACGTGATGATGAGAAAAATTATAA
TGAATCCAAACGAGCAGCGGTAAGTGTAGCCAAAGAATCTGGCTCTTACT
CTTTCCTGTTATACCAAGAATATAGAAGGTCTTAATTCTTGGCTACACTG
TTGGCGAGAAAGCCAACACCTCTCATGACGTTGTGTAGTGACACAAACGA
ACAGCGGTAAGCGATCTCAgttttctcgagatgcataaaatTATCGTGGT
CCACATGGTCCATATGGTAAGGTTGTTTCAGTGGTCTCATCACTGTGTCG
CCAAGCGAGCGtcccgggttcgattcccggagGTGCCATATATCATCTAT
CTCTCTATACTGCGTTTCTCGTGACCAAAGCCAGCTCAACTCTCTATCCA
ATTTCTTTCGGTAAATGAGTACTAGTAAGCCCTTCTGCAATAAGTGGGTC
AATCGCGGGTGTTGCGGGTTGTGCTATGTTGGCTTCACCCAAAGTGAAGT
AAGACTTGCTAAAATAATCCTATTTCCAGGCTATATGATCATCCAATCTA
GATTCCCAACTGAGGGGAACAGCTAATCGATTGATCGGCATAACTAATAT
TGCGAGCTTTTGTTATTCTATATTCAAATGTATAGCTTTCTAAAGTCTAT
GACTCGagactcttggatgggaaatgaagccacttatttcccatccagac
tGCCAGAatgcccgcgcgtggtttttacacaaacgccggattgaaagtaa
atctATCACTAAAGAATGTATGTagtcttcaaaaacaaaggaaccactag
atacaatcacTCCTTTTTGCTACTGTGTGAAAACCGAGTCATCGTAATAA
GAATAATTCCGTTGAGATTGGTTTCCACATTAAGGGAAAATtaagtgcac
acttaaagctaAAGGACCCTTAGATATGTAAACGATGCTTTAGGCGGTAA
TTGTTCTATTTCAAAATGAGACtttcaatgaattttttttaattagtacA
CTTTTGTCTCAGTAACAATTTTAGTTGAATAAGCTACTTGCTAAGAAAAA
ATATGGAAAGCGATTTTGTTGTTCATAGATCGATAATATCACAATTTAGG
AATACTTAAATCTAACAGTAATCGTGATTGTCATCAGCGTTAAGGGTTTT
TTCTATATCTTTTCATTTGTTGTTAAAGGAGGTTGTATGTATAGGTTTAT
CAAGTTTTCTCCTTTTTCAATAGGCTTTACAATATGCTAAGAGTGTCCAA
TCAGAGCCAAGAACGGCACCGCTTCCACCACCAGCCACTATCAAACCTTC
TACAAACACCACCACTCCATCGGATTATGATCAACTCTTGAAATCGATTG
AGGAAATGAAACAACGACATGAGCAAGACAAAGTAGCTGTCGATCAACTT
ACCGCCGGTAGACCACAACCTAAGAaataaaatctcatttttaaattttg
tgtgaattaaaagttttgaataaatttttattgatgATGAGACTCAGGTT
TTCTGATGTAAGTGTTCTGACAACACTCACTGTAATTCTGAAGCAACTAC
AAATTGTACACTCGCTCTGAGGACGAATCACtataggaaaaataaattca
ccCAGCAGATTGGTCAGGAAACTCTGCCAGTCAAATAATCATTAACATTG
TACTGGACTGTATTGTGAACATTCGATATGGGTCAAATTATGTATTGTCG
ACATTCAATATGGGTCAAATTATGTATTGTTTATATAGATTGatgtattt
tgaaaacaaacgaTGGATTATAACCAAGGATTATAAAGTTGAAAAAGGAC
ATTTAAATCGAATAATATTTCAAATCAGATAATTGCTGGTTAGGAAAGAC
TATTTATTCGGAAGCACTTTTAGAAAGTTAGTAAATATATATCTGTAAAT
aataaagttttcaattttatgtGAATTAACGGTATTGGATTAATCTTTAA
CGATGGCGTTTGATCTAGGTTTTGATGAAGGGCTTAGCTTTCAATTATGT
ATTAAATGTATTAAGGGGGGGTTTCACTTTTACGGTACGACGGTATTGGG
CCTTTTTACCCCCGgtaaatcggtattacgagaaaaaaacgacgggatta
cggtatttcattttctaccggtatcggtaaattgcctgtttttttgtcgg
tatttcgatatttttatcaataaaaaac

Coding sequence (CDS) from alignment at sc0000121:287386..292763+

>TCONS_00011093 ID=TCONS_00011093|Name=TCONS_00011093|organism=Clytia hemisphaerica|type=CDS|length=7272bp|location=Sequence derived from alignment at sc0000121:287386..292763+ (Clytia hemisphaerica)
ATGGCAGATTTCTACAGCAATGTTTCATCAATCGATGATAAAATCAAGAA
CAGTTTAAGCAGCACTTCCTTGGCATTCCAGCAGACATTCTTATCTAAAT
CAATGCCAGATCTTCAAGCTATCAAAGCACCATTGAACAAACCTATTGGT
GGAGTTGATGATGGTGAAATCAACTTACCAGATATTGCACCGGCGACTGC
AGGAGTTATGGATTCTCAACCACCAATAGCATTGAACACAAGACGTAAAT
CATATGGAGATCTCAATGACATCAAATTCTTTAATTCTGAATCTAGTGCT
GGAGATCCTAGCTATGGTCATCAGGCTCAATTTCAACCAGAGCTGCAAGA
AGGTGTAGATCGACTTCTGATCAAGAAACGgagcattttaaatgaaatcc
AAGTACCACAGTACCATAAAGGATCCAGGAAAGATATCCAGGATTTCTAC
AATcaagaagaaaatgaatttgaatcaAAACGGAATTCGAATCTCAAAGA
GTTAACAAGTCTGATGGTCAAGAAATCACCAAGGAAACTCACCATTGCCG
AAGAGTATCAGAAATTACAATTGGAAAGTAAAATGCAAGATGATATCCGA
AGAGCACAATCTATCTTTAATTCAACGCATAAGGAACGCATTGATGCTTG
CCAAACTAATCGAGATGGTATGGATTCTCTAGATTCTGCTCGTAAAATTC
CTGAACCATCCCAACCTGTTGAAGAATCTAAGCCAGAACCAATCGATGTA
GATGCGTTAATCAATAACCGAGGTCCAGTCAGCAGGAATATAGAGgaaga
aaacaacaaattgCTAGAGCTCTTGAAGAATGATCGCCAAGCTGAACCAG
AGCCTTCAATAGTTGGATTCACCAAAACGTATGAGCCTGAGGAACAGATT
CCACAATACAGTAACCGAGACCTGCAGCAACTGGGAGAATCACCAGTAGC
TAGCCCAGTAGCCAGAGAAGAGAAAGAAAATGGAGATGGGAAACCATACT
ATCCAATCAAAATGTACGTtaaacaaccaaaacaaaaagataaagTTGGC
AAGAGAAGCGATAATAAGGGGAACAAGAAAGCTGGTGCTGGTGGTGGTTC
ATACGCAGATCTGGCAAACAGAAAATCGACCAAGAAACAACCAGTGACCA
ACAAAACCAAGAAAACAAAACGAAAAGTACAATCAGCTGGAGGCCAAGCA
AAACCTAAGGAAGGACATAACAACAAATCAAAAGTTGGTGAGGCACGAGG
TGAAGTGAAGTCAGCCCTGGAATCAACTGGTCCTTTCTGCAAATGTTCTG
ATGAAGAAGATGGAGGAGCTGAAGAGCCAATTGATGCTAAGCATACACTG
GATTATCCAATCGTTCGACCTGTATTTAATGGTAATTACATCTTCGGTGG
AGCCGCTGAGGAGCCACAGTATTACCAACCACCCGGTGGACCACAAGCCA
CGTTTATGGCACCGCAAGCTTTACCAAGTGGTGGATTCTATATCCCACAA
CAAACCCAATATGCACCTCAAGATATGGCACCTTCCAGAGGAAATGTCAA
TGGTAATCTCTATTTTGCTGGATCTAATGATCCTTATCAACAGCAACCAG
CTCCATATAACGCGAATTTCGATACCCCATCAATGTCAGATAAAAACAAT
AATAGATATGATGACTGTCCGATggcacagaattatttcaacaAATTTGC
AGCCGTCCAAACATTCCAATCTGAATATCTCAATGAAATCAAGAATCAAC
CTAAACCACCAGTTATGCCAAAGCTACCAGTTGGTCTTCACAACCCATCA
ATCGATATGATGCATACTCCAATCGAAAGTGGTATCTATACCACAAAAGG
ACAAGAATTCTTACCACCAGTACCAGGACATCAAATCCCAATCAAACAAG
AGAGATTCTCAGCCAGTAATGAATATACAAGGATGTCTTCACCACAAAAC
ACTTCCAGTGGATACAGTACTGACGAAGGTTACGGTGAAAGACAACCTGT
CAAACCTAAACAACGGATAACCAAGAGCTTCTCACAAAATAGTGCTGAAG
AACTTCAGGACGAAATCATAAGGAAAAACAAAGTGATGCGCCAAAAGCAA
TACTCAGAAACCATTCGACAACACCAGAAGAGTTCATCACCCAAACCACA
AGTACCAAGTTGGAATATGCGATCACGTGATGATGAGAAAAATTATAATG
AATCCAAACGAGCAGCGGCTTTACAATATGCTAAGAGTGTCCAATCAGAG
CCAAGAACGGCACCGCTTCCACCACCAGCCACTATCAAACCTTCTACAAA
CACCACCACTCCATCGGATTATGATCAACTCTTGAAATCGATTGAGGAAA
TGAAACAACGACATGAGCAAGACAAAGTAGCTGTCGATCAACTTACCGCC
GGTAGACCACAACCTAAGAaataaATGGCAGATTTCTACAGCAATGTTTC
ATCAATCGATGATAAAATCAAGAACAGTTTAAGCAGCACTTCCTTGGCAT
TCCAGCAGACATTCTTATCTAAATCAATGCCAGATCTTCAAGCTATCAAA
GCACCATTGAACAAACCTATTGGTGGAGTTGATGATGGTGAAATCAACTT
ACCAGATATTGCACCGGCGACTGCAGGAGTTATGGATTCTCAACCACCAA
TAGCATTGAACACAAGACGTAAATCATATGGAGATCTCAATGACATCAAA
TTCTTTAATTCTGAATCTAGTGCTGGAGATCCTAGCTATGGTCATCAGGC
TCAATTTCAACCAGAGCTGCAAGAAGGTGTAGATCGACTTCTGATCAAGA
AACGgagcattttaaatgaaatccAAGTACCACAGTACCATAAAGGATCC
AGGAAAGATATCCAGGATTTCTACAATcaagaagaaaatgaatttgaatc
aAAACGGAATTCGAATCTCAAAGAGTTAACAAGTCTGATGGTCAAGAAAT
CACCAAGGAAACTCACCATTGCCGAAGAGTATCAGAAATTACAATTGGAA
AGTAAAATGCAAGATGATATCCGAAGAGCACAATCTATCTTTAATTCAAC
GCATAAGGAACGCATTGATGCTTGCCAAACTAATCGAGATGGTATGGATT
CTCTAGATTCTGCTCGTAAAATTCCTGAACCATCCCAACCTGTTGAAGAA
TCTAAGCCAGAACCAATCGATGTAGATGCGTTAATCAATAACCGAGGTCC
AGTCAGCAGGAATATAGAGgaagaaaacaacaaattgCTAGAGCTCTTGA
AGAATGATCGCCAAGCTGAACCAGAGCCTTCAATAGTTGGATTCACCAAA
ACGTATGAGCCTGAGGAACAGATTCCACAATACAGTAACCGAGACCTGCA
GCAACTGGGAGAATCACCAGTAGCTAGCCCAGTAGCCAGAGAAGAGAAAG
AAAATGGAGATGGGAAACCATACTATCCAATCAAAATGTACGTtaaacaa
ccaaaacaaaaagataaagTTGGCAAGAGAAGCGATAATAAGGGGAACAA
GAAAGCTGGTGCTGGTGGTGGTTCATACGCAGATCTGGCAAACAGAAAAT
CGACCAAGAAACAACCAGTGACCAACAAAACCAAGAAAACAAAACGAAAA
GTACAATCAGCTGGAGGCCAAGCAAAACCTAAGGAAGGACATAACAACAA
ATCAAAAGTTGGTGAGGCACGAGGTGAAGTGAAGTCAGCCCTGGAATCAA
CTGGTCCTTTCTGCAAATGTTCTGATGAAGAAGATGGAGGAGCTGAAGAG
CCAATTGATGCTAAGCATACACTGGATTATCCAATCGTTCGACCTGTATT
TAATGGTAATTACATCTTCGGTGGAGCCGCTGAGGAGCCACAGTATTACC
AACCACCCGGTGGACCACAAGCCACGTTTATGGCACCGCAAGCTTTACCA
AGTGGTGGATTCTATATCCCACAACAAACCCAATATGCACCTCAAGATAT
GGCACCTTCCAGAGGAAATGTCAATGGTAATCTCTATTTTGCTGGATCTA
ATGATCCTTATCAACAGCAACCAGCTCCATATAACGCGAATTTCGATACC
CCATCAATGTCAGATAAAAACAATAATAGATATGATGACTGTCCGATggc
acagaattatttcaacaAATTTGCAGCCGTCCAAACATTCCAATCTGAAT
ATCTCAATGAAATCAAGAATCAACCTAAACCACCAGTTATGCCAAAGCTA
CCAGTTGGTCTTCACAACCCATCAATCGATATGATGCATACTCCAATCGA
AAGTGGTATCTATACCACAAAAGGACAAGAATTCTTACCACCAGTACCAG
GACATCAAATCCCAATCAAACAAGAGAGATTCTCAGCCAGTAATGAATAT
ACAAGGATGTCTTCACCACAAAACACTTCCAGTGGATACAGTACTGACGA
AGGTTACGGTGAAAGACAACCTGTCAAACCTAAACAACGGATAACCAAGA
GCTTCTCACAAAATAGTGCTGAAGAACTTCAGGACGAAATCATAAGGAAA
AACAAAGTGATGCGCCAAAAGCAATACTCAGAAACCATTCGACAACACCA
GAAGAGTTCATCACCCAAACCACAAGTACCAAGTTGGAATATGCGATCAC
GTGATGATGAGAAAAATTATAATGAATCCAAACGAGCAGCGGCTTTACAA
TATGCTAAGAGTGTCCAATCAGAGCCAAGAACGGCACCGCTTCCACCACC
AGCCACTATCAAACCTTCTACAAACACCACCACTCCATCGGATTATGATC
AACTCTTGAAATCGATTGAGGAAATGAAACAACGACATGAGCAAGACAAA
GTAGCTGTCGATCAACTTACCGCCGGTAGACCACAACCTAAGAaataaAT
GGCAGATTTCTACAGCAATGTTTCATCAATCGATGATAAAATCAAGAACA
GTTTAAGCAGCACTTCCTTGGCATTCCAGCAGACATTCTTATCTAAATCA
ATGCCAGATCTTCAAGCTATCAAAGCACCATTGAACAAACCTATTGGTGG
AGTTGATGATGGTGAAATCAACTTACCAGATATTGCACCGGCGACTGCAG
GAGTTATGGATTCTCAACCACCAATAGCATTGAACACAAGACGTAAATCA
TATGGAGATCTCAATGACATCAAATTCTTTAATTCTGAATCTAGTGCTGG
AGATCCTAGCTATGGTCATCAGGCTCAATTTCAACCAGAGCTGCAAGAAG
GTGTAGATCGACTTCTGATCAAGAAACGgagcattttaaatgaaatccAA
GTACCACAGTACCATAAAGGATCCAGGAAAGATATCCAGGATTTCTACAA
TcaagaagaaaatgaatttgaatcaAAACGGAATTCGAATCTCAAAGAGT
TAACAAGTCTGATGGTCAAGAAATCACCAAGGAAACTCACCATTGCCGAA
GAGTATCAGAAATTACAATTGGAAAGTAAAATGCAAGATGATATCCGAAG
AGCACAATCTATCTTTAATTCAACGCATAAGGAACGCATTGATGCTTGCC
AAACTAATCGAGATGGTATGGATTCTCTAGATTCTGCTCGTAAAATTCCT
GAACCATCCCAACCTGTTGAAGAATCTAAGCCAGAACCAATCGATGTAGA
TGCGTTAATCAATAACCGAGGTCCAGTCAGCAGGAATATAGAGgaagaaa
acaacaaattgCTAGAGCTCTTGAAGAATGATCGCCAAGCTGAACCAGAG
CCTTCAATAGTTGGATTCACCAAAACGTATGAGCCTGAGGAACAGATTCC
ACAATACAGTAACCGAGACCTGCAGCAACTGGGAGAATCACCAGTAGCTA
GCCCAGTAGCCAGAGAAGAGAAAGAAAATGGAGATGGGAAACCATACTAT
CCAATCAAAATGTACGTtaaacaaccaaaacaaaaagataaagTTGGCAA
GAGAAGCGATAATAAGGGGAACAAGAAAGCTGGTGCTGGTGGTGGTTCAT
ACGCAGATCTGGCAAACAGAAAATCGACCAAGAAACAACCAGTGACCAAC
AAAACCAAGAAAACAAAACGAAAAGTACAATCAGCTGGAGGCCAAGCAAA
ACCTAAGGAAGGACATAACAACAAATCAAAAGTTGGTGAGGCACGAGGTG
AAGTGAAGTCAGCCCTGGAATCAACTGGTCCTTTCTGCAAATGTTCTGAT
GAAGAAGATGGAGGAGCTGAAGAGCCAATTGATGCTAAGCATACACTGGA
TTATCCAATCGTTCGACCTGTATTTAATGGTAATTACATCTTCGGTGGAG
CCGCTGAGGAGCCACAGTATTACCAACCACCCGGTGGACCACAAGCCACG
TTTATGGCACCGCAAGCTTTACCAAGTGGTGGATTCTATATCCCACAACA
AACCCAATATGCACCTCAAGATATGGCACCTTCCAGAGGAAATGTCAATG
GTAATCTCTATTTTGCTGGATCTAATGATCCTTATCAACAGCAACCAGCT
CCATATAACGCGAATTTCGATACCCCATCAATGTCAGATAAAAACAATAA
TAGATATGATGACTGTCCGATggcacagaattatttcaacaAATTTGCAG
CCGTCCAAACATTCCAATCTGAATATCTCAATGAAATCAAGAATCAACCT
AAACCACCAGTTATGCCAAAGCTACCAGTTGGTCTTCACAACCCATCAAT
CGATATGATGCATACTCCAATCGAAAGTGGTATCTATACCACAAAAGGAC
AAGAATTCTTACCACCAGTACCAGGACATCAAATCCCAATCAAACAAGAG
AGATTCTCAGCCAGTAATGAATATACAAGGATGTCTTCACCACAAAACAC
TTCCAGTGGATACAGTACTGACGAAGGTTACGGTGAAAGACAACCTGTCA
AACCTAAACAACGGATAACCAAGAGCTTCTCACAAAATAGTGCTGAAGAA
CTTCAGGACGAAATCATAAGGAAAAACAAAGTGATGCGCCAAAAGCAATA
CTCAGAAACCATTCGACAACACCAGAAGAGTTCATCACCCAAACCACAAG
TACCAAGTTGGAATATGCGATCACGTGATGATGAGAAAAATTATAATGAA
TCCAAACGAGCAGCGGCTTTACAATATGCTAAGAGTGTCCAATCAGAGCC
AAGAACGGCACCGCTTCCACCACCAGCCACTATCAAACCTTCTACAAACA
CCACCACTCCATCGGATTATGATCAACTCTTGAAATCGATTGAGGAAATG
AAACAACGACATGAGCAAGACAAAGTAGCTGTCGATCAACTTACCGCCGG
TAGACCACAACCTAAGAaataa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006215	XLOC_006215	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00011093-protein	TCONS_00011093-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00011093-exon-sc0000121-1491911889:287386..287456	TCONS_00011093-exon-sc0000121-1491911889:287386..287456	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1510915933:287386..287456	TCONS_00011093-exon-sc0000121-1510915933:287386..287456	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1575043694:287386..287456	TCONS_00011093-exon-sc0000121-1575043694:287386..287456	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1491911889:287783..289883	TCONS_00011093-exon-sc0000121-1491911889:287783..289883	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1510915933:287783..289883	TCONS_00011093-exon-sc0000121-1510915933:287783..289883	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1575043694:287783..289883	TCONS_00011093-exon-sc0000121-1575043694:287783..289883	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1491911889:290511..290654	TCONS_00011093-exon-sc0000121-1491911889:290511..290654	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1510915933:290511..290654	TCONS_00011093-exon-sc0000121-1510915933:290511..290654	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1575043694:290511..290654	TCONS_00011093-exon-sc0000121-1575043694:290511..290654	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1491911889:291809..292763	TCONS_00011093-exon-sc0000121-1491911889:291809..292763	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1510915933:291809..292763	TCONS_00011093-exon-sc0000121-1510915933:291809..292763	Clytia hemisphaerica	exon
TCONS_00011093-exon-sc0000121-1575043694:291809..292763	TCONS_00011093-exon-sc0000121-1575043694:291809..292763	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000121	supercontig	sc0000121:287386..292763 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32449	0.32766	0.288654	0.414841	0.266699	0.247231	0.417368	0.348898	1.55243	1.20955	1.20939	1.74393	20.8746	16.5001	1.65111	1.41071	1.77491	2.06115	47.8872	36.4487	8.86371	8.04972	3.02894	4.71156	6.81606	10.0989	0.382676	0.306692	0.308873	0.186164

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR027968	DUF4591

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00011093 vs. Swiss-Prot (Human)

BLAST of TCONS_00011093 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00011093 (transcript) - C. hemisphaerica