TCONS_00011069 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011069
Unique NameTCONS_00011069
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1695

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011069 ID=TCONS_00011069|Name=TCONS_00011069|organism=Clytia hemisphaerica|type=transcript|length=1695bp
TtacatttggtggttcgaaccgAGGTGTGGGAGTATAGTTTCAGAATTAG
CAAAATAGCTTCAAATagtcaaattcagaaaaacTAAGTCCAGAAGTCAG
AAAAAACAGAGTTAGAGATAGGAAATAgagagaaagaggaaaagggcgga
attggtgattgaaacTAGATCTTTCCAACTGCACGGGACAAAATGGCGAC
GAGATCTCTGTTCAGACTCACTTGCCATGGGTCAAATAAATACCTTATAA
TTCGTGcACTCAATACAACACCAAGAACTCTCTCAAGAGAAATCTTACCA
ACTATTACAGCAAGAAAATCAATCACGCTAAACAatgaGAAAGCTTTACA
CACCACAGCCTTGACATCACAAGCTACTGCCAAAGAACTGTTTGAGTTac
caaaaaacaagaaagaaggAGCAAGTCACTGGATGACTGAACGTGTTGTT
GCAGTTGCCTTACTTGGAGCTATTCCTGCTGCTGTGTTTTACCCAACTCC
TTTGGTGGATCATTGCCTATCTGTTTTGCTACCTCTTCACGCTTACTgGG
GAGTCAACGCAATCATCGGTGATTATTTGTATCGTCCATTAGTACCAGTC
ACCAAACTAGGCTGGGCTGTAACATGTGTATTGACAGGTGCCGGACTTAT
TTACTTGAACATTTATGATGTTGGtattgtcaaattttgtcaaatggTTT
TGAATTTATAAAGGAGTGTAAAAAACGGATTTGGAAAGAAGTATGAAATC
TTTTGTTTGTCTTGACATATAGATTTGGTAAAGATGTAAAAcaaatatat
ttatttatatGAAGCTGAATGGCTGTTGAGTAAAGGGATATATTTGTCGG
TGATGTTTGTTTGAAAAGCTGAAAGACTGAAAATTCCtgttttttgcatg
aaaaatacaaatggtttaaaaatttaacaaaggAATCAAGGAATACTATA
ATTTTTAACAACTTTAAAGGTTTAGATTTAAATCTGAAAAAGGTCTTACA
ACTGCATGTTATTAACAGATTATTTTTAATTTGTGATTATCATTGCATTT
AATTGCaagtatcaaaatatttttgtcaatcttTTTTTATCGGCGGAGTC
CGCTTAAGTAGATAATAAATTGTAATaaacaaacttaaaaaatgaaactc
ttacctaattttaaaattctttgttttatgttttcttcAATATAGTTGGA
GTATGGCGTCTCTTTCTCTTCAGAAAATTTGAGTCGTTGGAATTAGCTTC
TAtcagcactttttttctttgaatttttctattgttcgtACTGTCGGGTT
CATTAAAATTTTCCCTGATGTACTACTGCATGAATAATCTTGtcatacaa
agaaacaaaaaatgttcTAGAAAACAACAAATTCATATGactttttatca
tatttttaccACATGTTTCGTTTACGTGTTTTCATAATTATTCCCTCCCT
CGTACTGTTTCAATCCATCACTTTTAgacattttttcttatttttgacta
TCATTTTGAGTATGCATTTCAGCCctgcttttttaaaagaatcagaCCAG
CTTAAACCAGCATACgtttaaaatgctttttttagtTATATACAAGTTTT
GTAGTTCATGCATCTGTATATAACGGTTAAAAATTTTCCTGCCCAGTCTT
TTGTGTcagaaattttaatttcaaattataaattatgtcttcaaa
Run BLAST on NCBI

protein sequence of TCONS_00011069-protein

>TCONS_00011069-protein ID=TCONS_00011069-protein|Name=TCONS_00011069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=172bp
MATRSLFRLTCHGSNKYLIIRALNTTPRTLSREILPTITARKSITLNNEK
ALHTTALTSQATAKELFELPKNKKEGASHWMTERVVAVALLGAIPAAVFY
PTPLVDHCLSVLLPLHAYWGVNAIIGDYLYRPLVPVTKLGWAVTCVLTGA
GLIYLNIYDVGIVKFCQMVLNL
Run BLAST on NCBI

transcript from alignment at sc0000121:27147..34429+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011069 ID=TCONS_00011069|Name=TCONS_00011069|organism=Clytia hemisphaerica|type=transcript|length=7283bp|location=Sequence derived from alignment at sc0000121:27147..34429+ (Clytia hemisphaerica)
TtacatttggtggttcgaaccgAGGTGTGGGAGTATAGTTTCAGAATTAG
CAAAATAGCTTCAAATagtcaaattcagaaaaacTAAGTCCAGAAGTCAG
AAAAAACAGAGTTAGAGATAGGAAATAgagagaaagaggaaaagggcgga
attggtgattgaaacTAGATCTTTCCAACTGCACGGGACAAAATGGCGAC
GAGATCTCTGTTCAGACTCACTTGCCATGGGTCAAATAAATACCTTATAA
TTCGTGGTAAGTACATCTCCATTCCCTCATAATCTTTGAATACAAATCTT
GATTTTTATATGGTTCTGTCTACATAGTTTTATATTTGATCGTGACCTGT
AATCTTTTTGAAGTCTCCCTTTAATTTTGtttgtgctatttttttctttt
ttatgttttttatgaAGTTATGTAACTTTTTAAATCCAGGTATTTCGTTT
TAGAGGCTCTCTTCTATCAGAAACATAaatattctagaaaatgcaACACT
CCCACAGTTATCTATTCATCTAGGAATAAAGGTGCTCTCAATCTTTTTAC
TGTAGTTTGATGCGGTGTGAACTGGGgcgaaaaaaccttttttgctaGGG
CAGggctttttgtaaaaaatagccTGGTTCCTGTCACCCACAGACCCTAT
TTTCTTTCGTAAAAATAGGAGTTGGAGGGTCAGGTAGTCAATCTGGGtag
gcaaacgatatcatccaccggCAGgacacaagtgttacgcgtaagccaaa
tcacGTATTacaaacaacctctaaattgctgagtacaggagaaaaaaaat
ctaaattcaaaatggcggccaagcccacgctgataactatcaaaaatctt
cgtttttcaatcagctattgcagctcaataaatcaatgaaataatttgaa
ataaaaagtaaacaaaccttgaacgtttcatgaatatccaaataattaaa
aaaagtattcatctaaagtgaagattacatttcaaaataaaacaatttcc
aaaccaacctaaagtcagtgtctgccaactaaaactttctctgcggggtc
actggcaaggagttacaacttcagactttagattccaattcttgtatagg
ctacaactacactgccaaatgatctgtattacaaatacttccaaatgggt
ccataagttaagagaatgaaattatcatctagcacgggggttttgttttt
aaaaacaaacttcaaaataaaattgttaatgaacttattacttaaaatat
cacttacttacataatttatttatgatataacacccctttcttaaataat
ggcctcttaaagtcttttatgtttgccgcaaaaagggagaaaaattaaat
ttgacccccggttttttctctttttctagctagttcccgcgtgttagtgt
agacacaactttaatccgcggaaatgaagcgttttcattggtctaaaatc
acggatgtgaccattttaattttttcaatatttcgacCAGTGATGCTTTC
GAATATAAGTAATGTGataatttcttgtttttgacCAAAGTCCATCACCt
ggggacaaatatttttttataactaTGTTCAAACGGTTTTTTAGAAcgtg
ttaaaaatcacttgctctgGAAGCACCGGAAGAGCTCCGGAACTTTCCag
agagaaaaatagtgtttttttgcTGCTCCGGAAAACTCTGGAAGTTTCgg
gagcgccgggagggtccttcattcacaaatacttatagcatgtaatttac
agacctttttTAAGAAAGCTCCAAACCCTATCAATGCCCCTACcaggatc
cctacgggatcctaagttagGTCTCAGGGTAcggatgcccctaagaaggc
cttcagccttatattgtgactcttgagctccaaccctaaccctaaactga
taataaccaaacccccgtctaggtccgaaaattaaaaattttcacttgca
tcctgctGGATGATATCGTCAATCTGGTATTAGGTGCCGTCAATCTGATG
CTGCTGAGCAATAGTCAGTAGCCTGGGAATCCGAgctcataaaaagaaaa
aacacaaattacagtacctcacctcacaaagttttaaaattatatagagc
ttggtgcaggtagattagtctcacacagcatagtgtcctccccccccttt
ataaagggggggggattctgattttggccctttttttaaagtatggggga
aaatgaaaaatttgaaatttgctggNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNaatggagaaaaattttgatttttag
tggggggaaccaacccaggaggacactatgcacagaatgttataaataGT
CTGTTTGAACCtatgtgaacccttgttgacagactttctgaactttggaa
acccaggcaaacacacataatcaacacTTTAGGGGAGCCTTCCAAACTCA
GACTTGCCACGGAAAATGTCAAATTGACGTTTTGATTTCAAACCCCTGTC
CCCTTTCAAATAATGTCAGCCAGGGCAATCAAACTTGATCTCAAAATATT
CAACCCTTATCCCGTCGCTCGTTGTAAATATTCCATCGTTGTTTTGTcac
tctttttttttcctttttgctaGGGCTCGCatagtttacattttaaaaac
attgtatATAATGGatataatttctaaacttttaacCAATAGTCCCAGAA
TTTTTATCTCCATAATTTAAAGCGACAGAAAAAACCGTCCGTCTGCAAAA
ATTTGTAGGCCGCGCGGGCAGTCAAACAAAGAGAACCCATAAACATTGGG
CAGTTTGGAATGATTTTAAACAGCCGCAGCGAACATGGGCGAAGTAACAT
TTGGCATAGAATGAACTTctctaaaattgatttttctaatgaaaatttct
ttgccaCAAAAGAACATCAACAGATTATACCCCTACCCCCTTAACGTCCA
CTTGACGTTTTCCaaaaaaactactaaaaaccacatcaaaacatcataTG
CATATGAGCCGACTTTCATTTGAATTCAGCCTGAAATCCAatttgtaccg
tcaactgctttaacttgggacaattggttgaaacatgagactgttgatat
ctggcatGTATTTTCAGTTACTGTAAAAATTGAAAGTATGCGAAatgatt
ctagctttacgatagtgccgcagaTCATCATTGGATAgcattcaattatc
attatccctttacttttgcaaaaaaaagaaaaaatagaaaagttttttta
ttttttactgctctattcacatattgAGTTTGAAAGATCTTTATGTggca
ttttttttgcaaactttaaaaaactgatTTGGTCCTGCTTTTGGCTGGAC
TTTGGCTTATTAAGTGCTTATTAAGGAGcattgggtacaaagtccaaata
tgaaTTTCctgtaaattttatatgaacagTTAGGGCTATACTGTATGACC
CACCGACCGACCAACTGGAACCAAGCTATTTTTAATCAACAGCCAAACCT
CCAACAAACCTCTAACCCACCTACTCACTAATGTCAAATGACATTTTTCT
AAGGCCGtaatcacaaataacttgtgtttgcTTTGTCCCACTGACTGatg
atttttctcaattttccaATTATTTTGAGTTCAGTTGAGTTGGGAAGTTG
CAAAATTGTCAGAATTTTATCCATCCTTCCCTTCACCCGTTATCTTTACT
TCAAGCGCATGTTTTATTGTTTTGCGGAagaattcaatttcaaaatataa
cagAGATAATATCAAACCCTCTCCTATAGTTTTGTGGGAATGTGTTATTA
TGATCCCTAGATTTGATTTCTGCCCAACTCGTGGTTTAAAAATCCATTTT
CCCATTTTTCGAGCCCTTTTTTTGGCACCTATGGCCTCTCAGTGTCTCAC
CCTTTATATAtacatttgtttcaatccgtgatcctatGACTTggactttt
tcacattttcaattttctgaaTAAAGTTGAGTTcctttgagaattttttt
ttagcttGATTATTTGATTTTTAGGTGGAATTGTTATGCaaagataaaaa
ataacataaatGTATCCTTCTAGATCCTTCTAGAAGAGTAGATGCaaaga
taaaaaataacataaaCTAGATCCTTCTAGAAGAGTTTTATGAGTTTTTA
AAAAATCCGTTATACATTATATATATTAGATACAGCTGTCTTGCTTGAAA
cctttatttttcagttttgtcAATAATGAAAAcctgtttgtttttattta
ttagcACTCAATACAACACCAAGAACTCTCTCAAGAGAAATCTTACCAAC
TATTACAGCAAGAAAATCAATCACGCTAAACAGtacaattttttatattt
tttgtttttcctttataagtttcaaacataattctactcaatttttaact
ttttcgtCTAATTACGATTTAGACTATTAGTCTCTATATCGAAACatcat
gatattgaaaatatatattacctgtatttactttcattttcagatgaGAA
AGCTTTACACACCACAGCCTTGACATCACAAGCTACTGCCAAAGAACTGT
TTGAGTGTAAgatattttgatattaaaatCACTTGTAATGTGATTGATGA
TCACAATGTCAATGAGACCTAGATTATGAAAGAGTATGATTTTAGGAAGG
TGGTACTTGGTTTGTTTGTAAGAATCAAAAGTCTTGTTCTCTTTCAATTC
TTGGCAATTTTATTGAACACTCCCTAAGCTATTTAAAACATTATTCTTTA
TTATTTCCAATGTTATCTTATGGTCGACTTATATTGATTGTTTACTTTGA
CCTTTTAGTaccaaaaaacaagaaagaaggAGCAAGTCACTGGATGACTG
AACGTGTTGTTGCAGTTGCCTTACTTGGAGCTATTCCTGCTGCTGTGTTT
TACCCAACTCCTTTGGTGGATCATTGCCTATCTGTTTTGCTACCTCTTCA
CGCTTACTggtaaatacacgcttttttttttataagaatggtgtaaatcc
atttcatcatggatattcttaacttttttgggaaaatcatcctaaaatat
tcttacagcattctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcttataaagtgtattct
tataaaaaaaaaagcgtgtattgtctgaattgtttttatttcataataTG
AACTTGTGTTTAGGTTGTATTTCATgtgaaaaactttgattttctttgCT
TAATAATACCTAAAGTTCGTGtctttttctccattttagATTGGATTCCT
TTACTCATATTATTCTGTCATATTTTGTTCGGCATGAATTTCATGATACC
CGTTCTAACGGCTTTTCTCTCTCATTATTTTTTAAGGGGAGTCAACGCAA
TCATCGGTGATTATTTGTATCGTCCATTAGTACCAGTCACCAAACTAGGC
TGGGCTGTAACATGTGTATTGACAGGTGCCGGACTTATTTACTTGAACAT
TTATGATGTTGGtattgtcaaattttgtcaaatggTTTTGAATTTATAAA
GGAGTGTAAAAAACGGATTTGGAAAGAAGTATGAAATCTTTTGTTTGTCT
TGACATATAGATTTGGTAAAGATGTAAAAcaaatatatttatttatatGA
AGCTGAATGGCTGTTGAGTAAAGGGATATATTTGTCGGTGATGTTTGTTT
GAAAAGCTGAAAGACTGAAAATTCCtgttttttgcatgaaaaatacaaat
ggtttaaaaatttaacaaaggAATCAAGGAATACTATAATTTTTAACAAC
TTTAAAGGTTTAGATTTAAATCTGAAAAAGGTCTTACAACTGCATGTTAT
TAACAGATTATTTTTAATTTGTGATTATCATTGCATTTAATTGCaagtat
caaaatatttttgtcaatcttTTTTTATCGGCGGAGTCCGCTTAAGTAGA
TAATAAATTGTAATaaacaaacttaaaaaatgaaactcttacctaatttt
aaaattctttgttttatgttttcttcAATATAGTTGGAGTATGGCGTCTC
TTTCTCTTCAGAAAATTTGAGTCGTTGGAATTAGCTTCTAtcagcacttt
ttttctttgaatttttctattgttcgtACTGTCGGGTTCATTAAAATTTT
CCCTGATGTACTACTGCATGAATAATCTTGtcatacaaagaaacaaaaaa
tgttcTAGAAAACAACAAATTCATATGactttttatcatatttttaccAC
ATGTTTCGTTTACGTGTTTTCATAATTATTCCCTCCCTCGTACTGTTTCA
ATCCATCACTTTTAgacattttttcttatttttgactaTCATTTTGAGTA
TGCATTTCAGCCctgcttttttaaaagaatcagaCCAGCTTAAACCAGCA
TACgtttaaaatgctttttttagtTATATACAAGTTTTGTAGTTCATGCA
TCTGTATATAACGGTTAAAAATTTTCCTGCCCAGTCTTTTGTGTcagaaa
ttttaatttcaaattataaattatgtcttcaaa

Coding sequence (CDS) from alignment at sc0000121:27147..34429+

>TCONS_00011069 ID=TCONS_00011069|Name=TCONS_00011069|organism=Clytia hemisphaerica|type=CDS|length=2595bp|location=Sequence derived from alignment at sc0000121:27147..34429+ (Clytia hemisphaerica)
ATGGCGACGAGATCTCTGTTCAGACTCACTTGCCATGGGTCAAATAAATA
CCTTATAATTCGTGcACTCAATACAACACCAAGAACTCTCTCAAGAGAAA
TCTTACCAACTATTACAGCAAGAAAATCAATCACGCTAAACAatgaGAAA
GCTTTACACACCACAGCCTTGACATCACAAGCTACTGCCAAAGAACTGTT
TGAGTTaccaaaaaacaagaaagaaggAGCAAGTCACTGGATGACTGAAC
GTGTTGTTGCAGTTGCCTTACTTGGAGCTATTCCTGCTGCTGTGTTTTAC
CCAACTCCTTTGGTGGATCATTGCCTATCTGTTTTGCTACCTCTTCACGC
TTACTgGGGAGTCAACGCAATCATCGGTGATTATTTGTATCGTCCATTAG
TACCAGTCACCAAACTAGGCTGGGCTGTAACATGTGTATTGACAGGTGCC
GGACTTATTTACTTGAACATTTATGATGTTGGtattgtcaaattttgtca
aatggTTTTGAATTTATAAATGGCGACGAGATCTCTGTTCAGACTCACTT
GCCATGGGTCAAATAAATACCTTATAATTCGTGcACTCAATACAACACCA
AGAACTCTCTCAAGAGAAATCTTACCAACTATTACAGCAAGAAAATCAAT
CACGCTAAACAatgaGAAAGCTTTACACACCACAGCCTTGACATCACAAG
CTACTGCCAAAGAACTGTTTGAGTTaccaaaaaacaagaaagaaggAGCA
AGTCACTGGATGACTGAACGTGTTGTTGCAGTTGCCTTACTTGGAGCTAT
TCCTGCTGCTGTGTTTTACCCAACTCCTTTGGTGGATCATTGCCTATCTG
TTTTGCTACCTCTTCACGCTTACTgGGGAGTCAACGCAATCATCGGTGAT
TATTTGTATCGTCCATTAGTACCAGTCACCAAACTAGGCTGGGCTGTAAC
ATGTGTATTGACAGGTGCCGGACTTATTTACTTGAACATTTATGATGTTG
GtattgtcaaattttgtcaaatggTTTTGAATTTATAAATGGCGACGAGA
TCTCTGTTCAGACTCACTTGCCATGGGTCAAATAAATACCTTATAATTCG
TGcACTCAATACAACACCAAGAACTCTCTCAAGAGAAATCTTACCAACTA
TTACAGCAAGAAAATCAATCACGCTAAACAatgaGAAAGCTTTACACACC
ACAGCCTTGACATCACAAGCTACTGCCAAAGAACTGTTTGAGTTaccaaa
aaacaagaaagaaggAGCAAGTCACTGGATGACTGAACGTGTTGTTGCAG
TTGCCTTACTTGGAGCTATTCCTGCTGCTGTGTTTTACCCAACTCCTTTG
GTGGATCATTGCCTATCTGTTTTGCTACCTCTTCACGCTTACTgGGGAGT
CAACGCAATCATCGGTGATTATTTGTATCGTCCATTAGTACCAGTCACCA
AACTAGGCTGGGCTGTAACATGTGTATTGACAGGTGCCGGACTTATTTAC
TTGAACATTTATGATGTTGGtattgtcaaattttgtcaaatggTTTTGAA
TTTATAAATGGCGACGAGATCTCTGTTCAGACTCACTTGCCATGGGTCAA
ATAAATACCTTATAATTCGTGcACTCAATACAACACCAAGAACTCTCTCA
AGAGAAATCTTACCAACTATTACAGCAAGAAAATCAATCACGCTAAACAa
tgaGAAAGCTTTACACACCACAGCCTTGACATCACAAGCTACTGCCAAAG
AACTGTTTGAGTTaccaaaaaacaagaaagaaggAGCAAGTCACTGGATG
ACTGAACGTGTTGTTGCAGTTGCCTTACTTGGAGCTATTCCTGCTGCTGT
GTTTTACCCAACTCCTTTGGTGGATCATTGCCTATCTGTTTTGCTACCTC
TTCACGCTTACTgGGGAGTCAACGCAATCATCGGTGATTATTTGTATCGT
CCATTAGTACCAGTCACCAAACTAGGCTGGGCTGTAACATGTGTATTGAC
AGGTGCCGGACTTATTTACTTGAACATTTATGATGTTGGtattgtcaaat
tttgtcaaatggTTTTGAATTTATAAATGGCGACGAGATCTCTGTTCAGA
CTCACTTGCCATGGGTCAAATAAATACCTTATAATTCGTGcACTCAATAC
AACACCAAGAACTCTCTCAAGAGAAATCTTACCAACTATTACAGCAAGAA
AATCAATCACGCTAAACAatgaGAAAGCTTTACACACCACAGCCTTGACA
TCACAAGCTACTGCCAAAGAACTGTTTGAGTTaccaaaaaacaagaaaga
aggAGCAAGTCACTGGATGACTGAACGTGTTGTTGCAGTTGCCTTACTTG
GAGCTATTCCTGCTGCTGTGTTTTACCCAACTCCTTTGGTGGATCATTGC
CTATCTGTTTTGCTACCTCTTCACGCTTACTgGGGAGTCAACGCAATCAT
CGGTGATTATTTGTATCGTCCATTAGTACCAGTCACCAAACTAGGCTGGG
CTGTAACATGTGTATTGACAGGTGCCGGACTTATTTACTTGAACATTTAT
GATGTTGGtattgtcaaattttgtcaaatggTTTTGAATTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006207XLOC_006207Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011069-exon-sc0000121-1491911889:27147..27402TCONS_00011069-exon-sc0000121-1491911889:27147..27402Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1510915933:27147..27402TCONS_00011069-exon-sc0000121-1510915933:27147..27402Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1575043694:27147..27402TCONS_00011069-exon-sc0000121-1575043694:27147..27402Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1491911889:31701..31778TCONS_00011069-exon-sc0000121-1491911889:31701..31778Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1510915933:31701..31778TCONS_00011069-exon-sc0000121-1510915933:31701..31778Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1575043694:31701..31778TCONS_00011069-exon-sc0000121-1575043694:31701..31778Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1491911889:31940..32002TCONS_00011069-exon-sc0000121-1491911889:31940..32002Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1510915933:31940..32002TCONS_00011069-exon-sc0000121-1510915933:31940..32002Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1575043694:31940..32002TCONS_00011069-exon-sc0000121-1575043694:31940..32002Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1491911889:32255..32405TCONS_00011069-exon-sc0000121-1491911889:32255..32405Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1510915933:32255..32405TCONS_00011069-exon-sc0000121-1510915933:32255..32405Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1575043694:32255..32405TCONS_00011069-exon-sc0000121-1575043694:32255..32405Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1491911889:33283..34429TCONS_00011069-exon-sc0000121-1491911889:33283..34429Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1510915933:33283..34429TCONS_00011069-exon-sc0000121-1510915933:33283..34429Clytia hemisphaericaexon
TCONS_00011069-exon-sc0000121-1575043694:33283..34429TCONS_00011069-exon-sc0000121-1575043694:33283..34429Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011069-proteinTCONS_00011069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:27147..34429 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.1131	87.0947	128.034	128.975	82.5429	60.2256	83.1825	85.34	71.0952	75.0848	56.0561	73.8453	61.7416	61.3749	67.2591	76.0069	124.589	132.816	47.9166	47.6443	132.717	129.263	80.2226	81.9441	76.7056	70.873	95.5223	90.484	93.8258	83.1189
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR034804SQR/QFR_C/D
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011069 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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