TCONS_00011064 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011064
Unique NameTCONS_00011064
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length451

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011064 ID=TCONS_00011064|Name=TCONS_00011064|organism=Clytia hemisphaerica|type=transcript|length=451bp
cTTCTTTGGGTCATTACTTTACAAGCTAATACTTTTAGGTTGTGAAATTT
TAACACATTAATTTGAGGGACTTCAAGATGATGCATAACAAGTTTCATAC
CCTTACGATCAATATTTATTGCAAACGAAAgtaaaaatggccaaaagtgG
CCAAAGTCATCTTGATATACGGTATTGATGACAGTTTACAAGGAAAGAAC
CCCCTAGAGATCTCCAATAACTCCTTGAATGATCCCCttggaaaatatga
aaaatgaacaaaaaaacacTTGGACAATCCAAGCTCAGACCCGTCTGGAA
AGTTTGTCTATTAACCATGTCTAGAttaaaatggaatagcccattattGC
TATCAATTTGcatatgttttgaaagtttggagCATGTACTTTGTTTTCGT
GGATTtttcaatggtttcaaaacAGAAAATGCTTTATTTTTGAGAACAGC
A
Run BLAST on NCBI

transcript from alignment at sc0000119:478083..478533

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011064 ID=TCONS_00011064|Name=TCONS_00011064|organism=Clytia hemisphaerica|type=transcript|length=451bp|location=Sequence derived from alignment at sc0000119:478083..478533 (Clytia hemisphaerica)
TGCTGTTCTCAAAAATAAAGCATTTTCTgttttgaaaccattgaaaAATC
CACGAAAACAAAGTACATGctccaaactttcaaaacatatgCAAATTGAT
AGCaataatgggctattccattttaaTCTAGACATGGTTAATAGACAAAC
TTTCCAGACGGGTCTGAGCTTGGATTGTCCAAgtgtttttttgttcattt
ttcatattttccaaGGGGATCATTCAAGGAGTTATTGGAGATCTCTAGGG
GGTTCTTTCCTTGTAAACTGTCATCAATACCGTATATCAAGATGACTTTG
GCcacttttggccatttttacTTTCGTTTGCAATAAATATTGATCGTAAG
GGTATGAAACTTGTTATGCATCATCTTGAAGTCCCTCAAATTAATGTGTT
AAAATTTCACAACCTAAAAGTATTAGCTTGTAAAGTAATGACCCAAAGAA
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006202XLOC_006202Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011064-exon-sc0000119-1491911889:478083..478533TCONS_00011064-exon-sc0000119-1491911889:478083..478533Clytia hemisphaericaexon
TCONS_00011064-exon-sc0000119-1510915933:478083..478533TCONS_00011064-exon-sc0000119-1510915933:478083..478533Clytia hemisphaericaexon
TCONS_00011064-exon-sc0000119-1575043694:478083..478533TCONS_00011064-exon-sc0000119-1575043694:478083..478533Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:478083..478533 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.17282	1.40965	0.995943	1.13677	1.58161	1.87471	1.13088	1.58808	0.906333	0.918137	0.742639	1.074	0.390002	1.01255	0.166491	0.178671	0	0.225603	0.467524	0.163077	0.283487	0.414825	0	0.458458	2.36101	2.24762	0.402042	0.214535	0.325434	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011064 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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