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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011049 ID=TCONS_00011049|Name=TCONS_00011049|organism=Clytia hemisphaerica|type=transcript|length=1457bp
CATTTTCAGACCATCTGGCACAGAAGATGTCGTGAGAGTTTACGCCGAAG
CTGAGACTGCTGAAGCGACAGCGAAGTTATCAGCATTTGTAAGCCGATGT
GTTTACGATATTTGCAATGGTGTAGGTGACCGCCCTCAGGCNAAAAAGTA
TAGCCACCAATAACGACCATTGCATTGGTACATTTTCTCAGGTGAAAGAC
CGTCGTGTAATTCAACCTAACGAAGATGAGACAAGAGTTTTACAACCCAC
TGAACTTCAAGACAAGATTGACCAAGTTGTCAAACTTTTTCCTAAAGCCC
GATCCTTTGTCAGGTATTTTACGTTACCctcttgtttttttctcttgtaT
TTACAGTGGATTTGTTGCtcacacttttttcttataaacggggggggggg
ggggNAAGTCTACAATAACGTTGTTTCGTCCAACTAACGTACACATGTTA
CAAATATGAATGTCGAAACAACGTCGTATGCTAGCTGGGGTGGTTGGTTG
TCTTTTGAGTCTGTTCATGATTTGTGTGTACTCTTTTGGCTTTCATGTGG
AAATTATATCAATATTATTGGACCCATTCTCCTGGGAGTGGTTTCTACAT
AGCAGCAAGAAAGGTCCtaacttatcgtgaacagacttaaGGAATCATTA
CAGTATCAAGCactttgaattttcaaggaGTAAACGCTTCATTAGTTAAT
TTttgaattgatatttttaatcttttataaTTGGTAGCTATTTAAAGCGG
TTTCGTCCAAAGGAAAGTGTACATTGTCTATTTAACTGttattaaaaact
tttcaaatcatCCGCAGTTTTACTGATTTTCATGTCAGAAAGCTTTTACA
GTTGCTTTTAATAAAAAGCTCACTTTTTGCGATTTTATActtagatttat
ttttgtaggagatttttagtcaattttttaattatgtctttgaattttta
tttataagttaagtctaattttattttattgatggcaataatttgtcaaa
ttgaatTAAGATTATTTTATACATTGTGTATGCGAAATTAGGATAACCGA
TTTTATTTGTGATAAAAATTTTGTGGTGGTGTAGGGAATttcgttttttt
aatttttaggtttATTAAAATGATAAAAGATTTTGATAGCAGATTGCTAA
CCAAATATGTCATATTATTTTAGTATGTCTAGGTATTATTCGATAGGCAT
CCATATGAGCTCATTGGGCCCAAAATCTTATATATAACATGTCCCTAGTA
TTCTTGCCGGGTGGTCCTCACGAAAAAGTTGGAACGTTTCTCGACCTCTT
GAGGCAGAGCAGATATTCCAAAGTGCTtggtgttttaaaattttgaaagt
agaTACACtaactttttttagaaaaagctgatatttataaaaatcaaata
tgCATGTGATTTACCTCTAAAATGACTTTTAGAGGTATTTTTGATAATCA
TTAATGC Run BLAST on NCBI transcript from alignment at sc0000119:443402..445519- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011049 ID=TCONS_00011049|Name=TCONS_00011049|organism=Clytia hemisphaerica|type=transcript|length=2118bp|location=Sequence derived from alignment at sc0000119:443402..445519- (Clytia hemisphaerica)
CATTTTCAGACCATCTGGCACAGAAGATGTCGTGAGAGTTTACGCCGAAG
CTGAGACTGCTGTAAGTTTTTCTCTCTATATATTTGATATCGCTCATGCT
CTCTCCATTATCCTTGCAGTTGTCGAAATAAATGTCTATTTTCTCTACTC
CTGTTTTTCACTTGTTGTAAAAGAATTTAGGTTTGAATTGATTCTAGAAT
GGAAGTCATTTCTTCACTGGAAAACTTGAAGTTTATTTACGAAATCTCGT
AATTCAATCGCTGAAAGAAAAGCTTTTTTACAAAATGAAAATTAGATCTT
GCTAGAACTATGTGCCTAATAGTCCCATTCTTCCTTCTAACTGTTTAGAT
TGATTTGCCTAATTANGGTTAAGTAGGGCTTGAAATATAGCCTAGAAACC
AATAAATCCCTCCCAGATCGAAATTTTCGAGAAATGCTAAATTAGCCAAA
ATTGGCAATATGTTATGGCACTGATTGTAGTACATAATTTTGGCTAAATG
TAGTTTTTCCTGTTTTTTCGGCTTTTTTTTTCTGTTGAAATTAGACAGGG
AAAATAAAGGTAAATTTTGTGAACAATGATTAGGTTTTCTAAAGATTCAG
CCTGGATATGCTTATTAAAGTGTTATGTTTCTTTAAANAAGAATATTAGA
TGTAAATGCTTAATTTTTAACAAATTTTGCACCGGAAATAAAAATTGTCT
TTTTTTCGAATTTTTATCACAGGAAGCGACAGCGAAGTTATCAGCATTTG
TAAGCCGATGTGTTTACGATATTTGCAATGGTGTAGGTGACCGCCCTCAG
GCNAAAAAGTATAGCCACCAATAACGACCATTGCATTGGTACATTTTCTC
AGGTGAAAGACCGTCGTGTAATTCAACCTAACGAAGATGAGACAAGAGTT
TTACAACCCACTGAACTTCAAGACAAGATTGACCAAGTTGTCAAACTTTT
TCCTAAAGCCCGATCCTTTGTCAGGTATTTTACGTTACCCTCTTGTTTTT
TTCTCTTGTATTTACAGTGGATTTGTTGCTCACACTTTTTTCTTATAAAC
GGGGGGGGGGGGGGGNAAGTCTACAATAACGTTGTTTCGTCCAACTAACG
TACACATGTTACAAATATGAATGTCGAAACAACGTCGTATGCTAGCTGGG
GTGGTTGGTTGTCTTTTGAGTCTGTTCATGATTTGTGTGTACTCTTTTGG
CTTTCATGTGGAAATTATATCAATATTATTGGACCCATTCTCCTGGGAGT
GGTTTCTACATAGCAGCAAGAAAGGTCCTAACTTATCGTGAACAGACTTA
AGGAATCATTACAGTATCAAGCACTTTGAATTTTCAAGGAGTAAACGCTT
CATTAGTTAATTTTTGAATTGATATTTTTAATCTTTTATAATTGGTAGCT
ATTTAAAGCGGTTTCGTCCAAAGGAAAGTGTACATTGTCTATTTAACTGT
TATTAAAAACTTTTCAAATCATCCGCAGTTTTACTGATTTTCATGTCAGA
AAGCTTTTACAGTTGCTTTTAATAAAAAGCTCACTTTTTGCGATTTTATA
CTTAGATTTATTTTTGTAGGAGATTTTTAGTCAATTTTTTAATTATGTCT
TTGAATTTTTATTTATAAGTTAAGTCTAATTTTATTTTATTGATGGCAAT
AATTTGTCAAATTGAATTAAGATTATTTTATACATTGTGTATGCGAAATT
AGGATAACCGATTTTATTTGTGATAAAAATTTTGTGGTGGTGTAGGGAAT
TTCGTTTTTTTAATTTTTAGGTTTATTAAAATGATAAAAGATTTTGATAG
CAGATTGCTAACCAAATATGTCATATTATTTTAGTATGTCTAGGTATTAT
TCGATAGGCATCCATATGAGCTCATTGGGCCCAAAATCTTATATATAACA
TGTCCCTAGTATTCTTGCCGGGTGGTCCTCACGAAAAAGTTGGAACGTTT
CTCGACCTCTTGAGGCAGAGCAGATATTCCAAAGTGCTTGGTGTTTTAAA
ATTTTGAAAGTAGATACACTAACTTTTTTTAGAAAAAGCTGATATTTATA
AAAATCAAATATGCATGTGATTTACCTCTAAAATGACTTTTAGAGGTATT
TTTGATAATCATTAATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011049-exon-sc0000119-1575043694:445459..445519 | TCONS_00011049-exon-sc0000119-1575043694:445459..445519 | Clytia hemisphaerica | exon |
| TCONS_00011049-exon-sc0000119-1575043694:443402..444797 | TCONS_00011049-exon-sc0000119-1575043694:443402..444797 | Clytia hemisphaerica | exon |
| TCONS_00011049-exon-sc0000119-1510915933:445459..445519 | TCONS_00011049-exon-sc0000119-1510915933:445459..445519 | Clytia hemisphaerica | exon |
| TCONS_00011049-exon-sc0000119-1510915933:443402..444797 | TCONS_00011049-exon-sc0000119-1510915933:443402..444797 | Clytia hemisphaerica | exon |
| TCONS_00011049-exon-sc0000119-1491911889:445459..445519 | TCONS_00011049-exon-sc0000119-1491911889:445459..445519 | Clytia hemisphaerica | exon |
| TCONS_00011049-exon-sc0000119-1491911889:443402..444797 | TCONS_00011049-exon-sc0000119-1491911889:443402..444797 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119 | supercontig | sc0000119:443402..445519 - |
Blast
The following BLAST results are available for this feature:
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